View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1271_low_227 (Length: 204)

Name: NF1271_low_227
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1271_low_227
NF1271_low_227
[»] chr6 (38 HSPs)
chr6 (59-123)||(6755204-6755268)
chr6 (59-123)||(3922826-3922890)
chr6 (60-123)||(33595607-33595670)
chr6 (65-123)||(3218428-3218486)
chr6 (65-123)||(3922539-3922597)
chr6 (53-123)||(4243210-4243280)
chr6 (65-123)||(23068696-23068754)
chr6 (66-123)||(33595320-33595377)
chr6 (66-122)||(3218152-3218208)
chr6 (65-123)||(14763595-14763653)
chr6 (142-191)||(3218307-3218356)
chr6 (142-191)||(6755048-6755097)
chr6 (142-189)||(14763449-14763496)
chr6 (65-123)||(4242923-4242981)
chr6 (65-115)||(23068991-23069041)
chr6 (66-123)||(14763319-14763376)
chr6 (142-191)||(33595450-33595499)
chr6 (142-191)||(4243054-4243103)
chr6 (54-107)||(10026129-10026182)
chr6 (67-123)||(14655078-14655134)
chr6 (63-123)||(28852186-28852246)
chr6 (65-123)||(10810263-10810321)
chr6 (142-191)||(3922704-3922753)
chr6 (142-187)||(23068867-23068912)
chr6 (60-123)||(2863575-2863638)
chr6 (60-123)||(2882878-2882941)
chr6 (53-108)||(7920473-7920528)
chr6 (68-123)||(22569019-22569074)
chr6 (65-108)||(24896444-24896487)
chr6 (68-123)||(30121584-30121639)
chr6 (65-123)||(2316745-2316803)
chr6 (65-123)||(9899195-9899253)
chr6 (65-123)||(9899451-9899509)
chr6 (65-123)||(13178479-13178537)
chr6 (65-122)||(1925408-1925465)
chr6 (65-122)||(10027124-10027181)
chr6 (65-122)||(21926064-21926121)
chr6 (63-123)||(24325249-24325309)
[»] chr5 (67 HSPs)
chr5 (59-123)||(40834223-40834287)
chr5 (63-123)||(18485657-18485717)
chr5 (59-123)||(20769706-20769770)
chr5 (63-123)||(32936493-32936553)
chr5 (60-123)||(2094860-2094923)
chr5 (64-123)||(35362983-35363042)
chr5 (60-123)||(35363277-35363340)
chr5 (61-115)||(30370507-30370561)
chr5 (65-123)||(40833936-40833994)
chr5 (59-123)||(7145527-7145591)
chr5 (63-123)||(30370798-30370858)
chr5 (64-123)||(19558160-19558219)
chr5 (65-123)||(15179077-15179135)
chr5 (65-123)||(20339156-20339214)
chr5 (65-123)||(32936206-32936264)
chr5 (65-123)||(32994442-32994500)
chr5 (65-115)||(37093739-37093789)
chr5 (142-191)||(2094738-2094787)
chr5 (142-191)||(40834067-40834116)
chr5 (65-123)||(2094575-2094633)
chr5 (65-123)||(13600444-13600502)
chr5 (65-123)||(13600733-13600791)
chr5 (65-123)||(18485947-18486005)
chr5 (65-123)||(35362205-35362263)
chr5 (142-191)||(3539762-3539811)
chr5 (62-123)||(27843020-27843081)
chr5 (142-191)||(35363149-35363198)
chr5 (67-123)||(20770000-20770056)
chr5 (142-189)||(7145669-7145716)
chr5 (65-123)||(7145826-7145884)
chr5 (142-191)||(13600611-13600660)
chr5 (142-191)||(18485825-18485874)
chr5 (142-191)||(20769843-20769892)
chr5 (142-191)||(30370676-30370725)
chr5 (65-122)||(32458075-32458132)
chr5 (63-115)||(25363014-25363066)
chr5 (68-123)||(3539600-3539655)
chr5 (60-122)||(3539884-3539946)
chr5 (142-191)||(32936371-32936420)
chr5 (59-123)||(33429789-33429853)
chr5 (68-123)||(132048-132103)
chr5 (64-123)||(22621303-22621362)
chr5 (60-123)||(24858398-24858461)
chr5 (65-123)||(25363303-25363361)
chr5 (62-123)||(19131126-19131187)
chr5 (63-123)||(2426227-2426287)
chr5 (63-123)||(14871732-14871792)
chr5 (63-123)||(39589613-39589673)
chr5 (146-181)||(132224-132259)
chr5 (65-123)||(132336-132392)
chr5 (61-108)||(13455945-13455992)
chr5 (60-123)||(15178784-15178847)
chr5 (68-115)||(35361922-35361969)
chr5 (146-181)||(35362093-35362128)
chr5 (65-123)||(1643539-1643597)
chr5 (65-123)||(2467059-2467117)
chr5 (65-123)||(16736801-16736859)
chr5 (65-123)||(40952067-40952125)
chr5 (67-108)||(14729450-14729491)
chr5 (62-107)||(19984534-19984579)
chr5 (61-122)||(32994158-32994219)
chr5 (66-122)||(3294584-3294640)
chr5 (64-108)||(7601864-7601908)
chr5 (62-106)||(16737076-16737120)
chr5 (146-178)||(27843157-27843189)
chr5 (63-123)||(30129731-30129791)
chr5 (60-108)||(37092175-37092222)
[»] chr4 (97 HSPs)
chr4 (59-123)||(26202516-26202580)
chr4 (59-123)||(33692256-33692320)
chr4 (60-123)||(41689384-41689447)
chr4 (59-120)||(9525799-9525860)
chr4 (62-123)||(23163278-23163339)
chr4 (54-123)||(52690385-52690454)
chr4 (55-115)||(2685975-2686035)
chr4 (59-123)||(28458809-28458873)
chr4 (59-123)||(37872761-37872825)
chr4 (60-123)||(13294890-13294953)
chr4 (65-123)||(20930975-20931033)
chr4 (65-123)||(23163567-23163625)
chr4 (65-123)||(49621439-49621497)
chr4 (65-123)||(49621725-49621783)
chr4 (55-123)||(42857089-42857157)
chr4 (67-123)||(50161404-50161460)
chr4 (59-123)||(55140192-55140256)
chr4 (64-123)||(21707890-21707949)
chr4 (65-120)||(33369509-33369564)
chr4 (59-122)||(46143559-46143622)
chr4 (68-123)||(50161118-50161173)
chr4 (65-123)||(21053583-21053641)
chr4 (65-123)||(25297680-25297738)
chr4 (142-191)||(3546620-3546669)
chr4 (142-191)||(21053461-21053510)
chr4 (142-191)||(21707768-21707817)
chr4 (142-191)||(33369643-33369692)
chr4 (142-191)||(41689523-41689572)
chr4 (65-122)||(42856804-42856861)
chr4 (142-191)||(55742739-55742788)
chr4 (68-123)||(30799295-30799350)
chr4 (64-115)||(55742620-55742671)
chr4 (65-123)||(9526096-9526154)
chr4 (64-122)||(30055207-30055265)
chr4 (65-115)||(33692557-33692607)
chr4 (65-123)||(48419504-48419562)
chr4 (142-191)||(20931142-20931191)
chr4 (59-120)||(30055494-30055555)
chr4 (66-123)||(30799611-30799668)
chr4 (66-123)||(46143273-46143330)
chr4 (142-191)||(48419382-48419431)
chr4 (65-122)||(55742896-55742953)
chr4 (67-123)||(3546490-3546546)
chr4 (67-123)||(28458523-28458579)
chr4 (68-123)||(33369799-33369854)
chr4 (65-115)||(3546786-3546836)
chr4 (65-123)||(13294602-13294660)
chr4 (65-123)||(20931265-20931323)
chr4 (149-191)||(37872901-37872943)
chr4 (65-123)||(52690096-52690154)
chr4 (142-191)||(5260324-5260373)
chr4 (142-191)||(13294734-13294783)
chr4 (142-191)||(28458687-28458736)
chr4 (142-191)||(33692393-33692442)
chr4 (142-191)||(42856967-42857016)
chr4 (142-191)||(46143437-46143485)
chr4 (142-191)||(50161282-50161331)
chr4 (142-191)||(55140327-55140376)
chr4 (75-123)||(5260204-5260252)
chr4 (143-191)||(9525974-9526022)
chr4 (142-186)||(52690266-52690310)
chr4 (64-123)||(5260480-5260539)
chr4 (65-123)||(32488584-32488642)
chr4 (65-123)||(37873050-37873108)
chr4 (142-191)||(23163445-23163494)
chr4 (142-191)||(23549663-23549712)
chr4 (59-108)||(45655963-45656012)
chr4 (142-191)||(49621570-49621619)
chr4 (59-107)||(21360451-21360499)
chr4 (56-120)||(23963107-23963171)
chr4 (66-122)||(55140485-55140541)
chr4 (68-123)||(41689679-41689734)
chr4 (65-123)||(23549788-23549846)
chr4 (68-122)||(25297969-25298023)
chr4 (62-108)||(37068682-37068728)
chr4 (142-187)||(26202653-26202698)
chr4 (59-123)||(10993619-10993683)
chr4 (67-123)||(21707605-21707661)
chr4 (64-123)||(31857837-31857896)
chr4 (64-123)||(52538135-52538194)
chr4 (64-123)||(52653930-52653989)
chr4 (146-188)||(2686114-2686156)
chr4 (65-123)||(9902653-9902711)
chr4 (65-123)||(20983914-20983972)
chr4 (65-123)||(20984170-20984228)
chr4 (146-188)||(30799455-30799497)
chr4 (65-123)||(32922323-32922381)
chr4 (61-123)||(52537875-52537937)
chr4 (65-123)||(52654188-52654246)
chr4 (79-112)||(23549473-23549506)
chr4 (63-108)||(32922065-32922110)
chr4 (68-113)||(43914443-43914488)
chr4 (66-115)||(53232395-53232444)
chr4 (65-113)||(2686282-2686330)
chr4 (63-123)||(9902912-9902972)
chr4 (67-123)||(44551171-44551227)
chr4 (67-115)||(53232099-53232147)
[»] chr3 (76 HSPs)
chr3 (55-115)||(49621274-49621334)
chr3 (54-123)||(22317007-22317076)
chr3 (63-123)||(37513378-37513438)
chr3 (65-123)||(8851804-8851862)
chr3 (65-123)||(22316720-22316778)
chr3 (60-122)||(48434091-48434153)
chr3 (58-123)||(36229756-36229821)
chr3 (67-123)||(11121570-11121626)
chr3 (59-123)||(28830040-28830104)
chr3 (63-123)||(33491692-33491752)
chr3 (56-123)||(8852093-8852160)
chr3 (67-122)||(22975633-22975688)
chr3 (65-123)||(25847445-25847503)
chr3 (65-123)||(25847732-25847790)
chr3 (65-123)||(49711401-49711459)
chr3 (65-122)||(9296383-9296440)
chr3 (142-191)||(22316851-22316900)
chr3 (142-191)||(22975476-22975525)
chr3 (62-123)||(55009386-55009447)
chr3 (63-123)||(28829751-28829811)
chr3 (68-123)||(36230051-36230106)
chr3 (68-123)||(48433801-48433856)
chr3 (56-122)||(11121274-11121340)
chr3 (65-123)||(37513091-37513149)
chr3 (53-115)||(49711694-49711756)
chr3 (142-191)||(9296547-9296596)
chr3 (65-122)||(23043478-23043535)
chr3 (143-191)||(37513223-37513271)
chr3 (143-191)||(49711565-49711613)
chr3 (65-108)||(22975345-22975388)
chr3 (68-123)||(44506049-44506104)
chr3 (68-122)||(3612598-3612652)
chr3 (65-123)||(33491602-33491660)
chr3 (60-122)||(44506332-44506394)
chr3 (142-191)||(8851970-8852019)
chr3 (65-122)||(17574373-17574430)
chr3 (58-123)||(23043176-23043241)
chr3 (142-191)||(23043355-23043404)
chr3 (142-191)||(48433968-48434017)
chr3 (142-191)||(49621109-49621158)
chr3 (142-187)||(55009228-55009273)
chr3 (143-187)||(11121415-11121459)
chr3 (65-123)||(49620978-49621036)
chr3 (54-123)||(3612883-3612952)
chr3 (59-108)||(39778550-39778599)
chr3 (142-191)||(49984876-49984925)
chr3 (67-123)||(10687880-10687936)
chr3 (63-123)||(39930631-39930691)
chr3 (55-123)||(41944132-41944200)
chr3 (60-123)||(20209145-20209208)
chr3 (56-123)||(31574509-31574576)
chr3 (142-189)||(36229894-36229941)
chr3 (65-123)||(2862701-2862759)
chr3 (146-188)||(3612765-3612807)
chr3 (65-123)||(55009099-55009156)
chr3 (63-108)||(11220990-11221035)
chr3 (142-191)||(25847576-25847625)
chr3 (142-187)||(28829883-28829928)
chr3 (63-123)||(44664619-44664679)
chr3 (59-123)||(49002231-49002295)
chr3 (83-115)||(49985006-49985038)
chr3 (68-123)||(1342180-1342235)
chr3 (64-123)||(14463379-14463438)
chr3 (64-119)||(35850940-35850995)
chr3 (146-181)||(44506181-44506216)
chr3 (61-108)||(50711127-50711174)
chr3 (65-123)||(50711251-50711309)
chr3 (50-108)||(53712236-53712294)
chr3 (59-108)||(18169025-18169074)
chr3 (59-108)||(35415513-35415562)
chr3 (59-108)||(44664892-44664941)
chr3 (67-108)||(45567410-45567451)
chr3 (61-106)||(51001569-51001614)
chr3 (67-123)||(11989517-11989573)
chr3 (64-108)||(14626407-14626451)
chr3 (63-123)||(38675237-38675297)
[»] chr2 (61 HSPs)
chr2 (60-123)||(10044740-10044803)
chr2 (60-115)||(10108808-10108863)
chr2 (65-123)||(2318777-2318835)
chr2 (65-123)||(9320090-9320148)
chr2 (65-123)||(18916625-18916683)
chr2 (65-123)||(18916912-18916970)
chr2 (62-122)||(20364259-20364319)
chr2 (59-123)||(27360409-27360473)
chr2 (60-123)||(17846295-17846358)
chr2 (65-123)||(601620-601678)
chr2 (65-123)||(4261443-4261501)
chr2 (65-123)||(17846008-17846066)
chr2 (142-191)||(20364136-20364185)
chr2 (142-191)||(27360252-27360301)
chr2 (67-123)||(9319804-9319860)
chr2 (55-123)||(44536472-44536540)
chr2 (68-123)||(4261156-4261211)
chr2 (64-123)||(20363969-20364028)
chr2 (64-122)||(2318492-2318550)
chr2 (68-122)||(5547339-5547393)
chr2 (60-122)||(18178377-18178439)
chr2 (142-191)||(2318623-2318672)
chr2 (142-191)||(9319968-9320017)
chr2 (142-191)||(10044876-10044925)
chr2 (142-191)||(17846139-17846188)
chr2 (65-122)||(27360119-27360176)
chr2 (142-191)||(44536349-44536398)
chr2 (63-123)||(30337422-30337482)
chr2 (61-123)||(10045035-10045096)
chr2 (142-191)||(10108945-10108994)
chr2 (64-123)||(601326-601386)
chr2 (66-122)||(10109104-10109160)
chr2 (65-123)||(8322470-8322528)
chr2 (65-123)||(44536179-44536237)
chr2 (59-108)||(5547096-5547145)
chr2 (142-191)||(18916756-18916805)
chr2 (142-186)||(4261284-4261328)
chr2 (63-123)||(8236688-8236748)
chr2 (64-123)||(10714007-10714066)
chr2 (65-123)||(30337716-30337774)
chr2 (65-106)||(981781-981822)
chr2 (61-122)||(1479273-1479334)
chr2 (66-123)||(33274653-33274710)
chr2 (55-123)||(29154054-29154122)
chr2 (63-123)||(35412133-35412193)
chr2 (68-123)||(13862496-13862551)
chr2 (64-123)||(26499667-26499726)
chr2 (60-123)||(40710311-40710374)
chr2 (65-123)||(1650759-1650817)
chr2 (65-123)||(11723705-11723763)
chr2 (65-123)||(30488336-30488394)
chr2 (142-191)||(601460-601509)
chr2 (63-112)||(21254349-21254398)
chr2 (65-122)||(26499422-26499479)
chr2 (66-123)||(28789123-28789180)
chr2 (65-122)||(31769782-31769839)
chr2 (59-123)||(341306-341370)
chr2 (67-123)||(20663914-20663970)
chr2 (67-115)||(21251784-21251832)
chr2 (63-115)||(23926389-23926441)
chr2 (59-123)||(38574874-38574938)
[»] chr1 (65 HSPs)
chr1 (60-123)||(40902322-40902385)
chr1 (59-123)||(2027007-2027071)
chr1 (63-123)||(12139312-12139372)
chr1 (65-123)||(2026721-2026779)
chr1 (65-123)||(30563071-30563129)
chr1 (65-122)||(7113865-7113922)
chr1 (59-123)||(1549321-1549385)
chr1 (48-123)||(17611408-17611483)
chr1 (60-123)||(17611712-17611775)
chr1 (60-123)||(30562779-30562842)
chr1 (68-122)||(25780177-25780231)
chr1 (142-191)||(30562914-30562963)
chr1 (143-191)||(1549459-1549507)
chr1 (59-123)||(19897170-19897234)
chr1 (67-123)||(25779887-25779943)
chr1 (63-122)||(7114151-7114210)
chr1 (68-123)||(17985290-17985345)
chr1 (65-123)||(12115239-12115297)
chr1 (142-191)||(2026852-2026901)
chr1 (65-122)||(12139024-12139081)
chr1 (142-191)||(17611590-17611639)
chr1 (142-191)||(40902493-40902542)
chr1 (59-123)||(17985575-17985639)
chr1 (143-191)||(30002375-30002423)
chr1 (67-123)||(30002496-30002552)
chr1 (142-189)||(25780057-25780104)
chr1 (68-123)||(30002214-30002269)
chr1 (142-191)||(7114029-7114078)
chr1 (142-191)||(17985454-17985503)
chr1 (55-123)||(7349760-7349828)
chr1 (59-123)||(34480440-34480504)
chr1 (75-123)||(40902615-40902663)
chr1 (53-108)||(8853084-8853139)
chr1 (142-189)||(12139155-12139202)
chr1 (61-123)||(4969360-4969422)
chr1 (65-123)||(19897466-19897524)
chr1 (65-115)||(40290077-40290127)
chr1 (67-123)||(12114954-12115010)
chr1 (59-123)||(39672830-39672894)
chr1 (61-120)||(49564599-49564659)
chr1 (68-123)||(26874483-26874538)
chr1 (65-123)||(4969652-4969710)
chr1 (65-123)||(5586487-5586545)
chr1 (61-123)||(28554186-28554248)
chr1 (61-123)||(31289250-31289312)
chr1 (65-123)||(35521463-35521521)
chr1 (65-123)||(49564185-49564243)
chr1 (55-108)||(6489143-6489196)
chr1 (63-123)||(4695192-4695252)
chr1 (60-123)||(5618327-5618390)
chr1 (146-181)||(12115088-12115123)
chr1 (59-106)||(24234809-24234856)
chr1 (60-123)||(40934674-40934737)
chr1 (80-123)||(45315512-45315555)
chr1 (65-123)||(5618071-5618129)
chr1 (65-123)||(25267181-25267239)
chr1 (65-123)||(29233687-29233745)
chr1 (65-123)||(34480184-34480242)
chr1 (65-122)||(8853352-8853409)
chr1 (67-112)||(9172857-9172902)
chr1 (67-112)||(9180839-9180884)
chr1 (65-122)||(25267441-25267498)
chr1 (62-123)||(40934413-40934474)
chr1 (67-123)||(12649924-12649980)
chr1 (67-123)||(39673092-39673148)
[»] chr8 (76 HSPs)
chr8 (62-123)||(30904647-30904708)
chr8 (59-123)||(14577153-14577217)
chr8 (60-123)||(17875763-17875826)
chr8 (60-123)||(35482989-35483052)
chr8 (65-123)||(2968157-2968215)
chr8 (65-123)||(10682061-10682119)
chr8 (65-123)||(17876057-17876115)
chr8 (65-123)||(27912385-27912443)
chr8 (65-123)||(27958804-27958862)
chr8 (65-123)||(35482702-35482760)
chr8 (56-123)||(27912086-27912153)
chr8 (56-123)||(27958505-27958572)
chr8 (64-123)||(30928600-30928659)
chr8 (65-123)||(30904361-30904419)
chr8 (142-191)||(10682225-10682274)
chr8 (65-122)||(20178371-20178428)
chr8 (65-122)||(20223099-20223156)
chr8 (142-191)||(30904526-30904575)
chr8 (67-122)||(17844169-17844224)
chr8 (64-123)||(20223394-20223453)
chr8 (64-123)||(44379521-44379580)
chr8 (65-123)||(3691582-3691640)
chr8 (69-122)||(10682349-10682402)
chr8 (59-123)||(30253882-30253946)
chr8 (60-115)||(2967865-2967920)
chr8 (60-123)||(38464925-38464987)
chr8 (64-122)||(13327261-13327319)
chr8 (65-123)||(23792867-23792925)
chr8 (143-191)||(27912228-27912276)
chr8 (143-191)||(27958647-27958695)
chr8 (64-107)||(21660999-21661042)
chr8 (67-122)||(30928315-30928370)
chr8 (65-123)||(3691873-3691931)
chr8 (146-188)||(20223240-20223282)
chr8 (142-191)||(2968002-2968051)
chr8 (54-122)||(27523243-27523311)
chr8 (59-123)||(37727193-37727257)
chr8 (59-123)||(42684781-42684845)
chr8 (64-123)||(44379814-44379876)
chr8 (60-123)||(27713020-27713083)
chr8 (64-123)||(28828472-28828531)
chr8 (68-123)||(34213388-34213443)
chr8 (146-188)||(17844051-17844093)
chr8 (65-123)||(30463914-30463972)
chr8 (146-188)||(30928482-30928524)
chr8 (61-123)||(34199091-34199153)
chr8 (146-188)||(44379657-44379699)
chr8 (65-115)||(13327558-13327610)
chr8 (142-191)||(17875899-17875948)
chr8 (142-191)||(35482833-35482882)
chr8 (66-123)||(42123703-42123760)
chr8 (63-123)||(4128739-4128799)
chr8 (65-105)||(10925376-10925416)
chr8 (16-56)||(11976297-11976337)
chr8 (67-115)||(13795516-13795564)
chr8 (63-123)||(38464639-38464699)
chr8 (59-115)||(42124000-42124056)
chr8 (60-123)||(148288-148351)
chr8 (156-191)||(14577010-14577045)
chr8 (67-122)||(26938441-26938496)
chr8 (68-123)||(27712767-27712822)
chr8 (146-188)||(4128876-4128918)
chr8 (54-120)||(6078070-6078136)
chr8 (147-181)||(13327438-13327472)
chr8 (65-123)||(21660726-21660784)
chr8 (146-188)||(23792749-23792791)
chr8 (65-123)||(33279194-33279252)
chr8 (65-123)||(34632225-34632283)
chr8 (53-123)||(36556791-36556861)
chr8 (60-106)||(40277502-40277548)
chr8 (146-188)||(42123870-42123912)
chr8 (147-188)||(7899896-7899937)
chr8 (66-123)||(29596403-29596460)
chr8 (68-120)||(18806004-18806056)
chr8 (83-123)||(32063715-32063755)
chr8 (65-121)||(39198615-39198671)
[»] chr7 (81 HSPs)
chr7 (60-123)||(28408528-28408591)
chr7 (60-123)||(32523490-32523553)
chr7 (65-123)||(7417799-7417857)
chr7 (65-123)||(19305740-19305798)
chr7 (65-123)||(49114150-49114208)
chr7 (57-123)||(1511474-1511540)
chr7 (65-123)||(8437305-8437363)
chr7 (65-123)||(8437593-8437651)
chr7 (65-123)||(10878625-10878683)
chr7 (65-123)||(49113862-49113920)
chr7 (142-191)||(32523332-32523381)
chr7 (62-123)||(37453354-37453415)
chr7 (65-122)||(44307611-44307668)
chr7 (67-123)||(28408244-28408300)
chr7 (68-123)||(2933289-2933344)
chr7 (64-123)||(7417510-7417569)
chr7 (68-123)||(32178142-32178197)
chr7 (68-123)||(32832521-32832576)
chr7 (142-189)||(37453234-37453281)
chr7 (64-123)||(44307906-44307965)
chr7 (65-123)||(32177855-32177913)
chr7 (142-191)||(8437470-8437519)
chr7 (65-122)||(31894258-31894315)
chr7 (142-191)||(32177986-32178035)
chr7 (142-191)||(45746889-45746938)
chr7 (63-122)||(1511188-1511247)
chr7 (76-123)||(32523212-32523259)
chr7 (60-122)||(2933557-2933619)
chr7 (65-123)||(19306031-19306089)
chr7 (142-191)||(19305909-19305958)
chr7 (65-122)||(31894543-31894600)
chr7 (58-123)||(45747011-45747076)
chr7 (143-191)||(7417644-7417692)
chr7 (52-108)||(21733055-21733111)
chr7 (142-186)||(49113993-49114037)
chr7 (146-188)||(44307752-44307794)
chr7 (142-191)||(28408373-28408422)
chr7 (63-112)||(32832232-32832281)
chr7 (142-187)||(32832366-32832411)
chr7 (60-116)||(8114575-8114631)
chr7 (59-123)||(31283409-31283473)
chr7 (146-188)||(1511355-1511397)
chr7 (65-123)||(7172931-7172989)
chr7 (76-122)||(24986729-24986775)
chr7 (53-123)||(47221951-47222021)
chr7 (62-123)||(4030865-4030926)
chr7 (67-108)||(8869584-8869625)
chr7 (62-115)||(43161653-43161706)
chr7 (65-122)||(45746724-45746781)
chr7 (59-123)||(10360399-10360463)
chr7 (63-123)||(44458040-44458100)
chr7 (142-181)||(2933444-2933483)
chr7 (64-123)||(42391295-42391354)
chr7 (61-108)||(42391567-42391614)
chr7 (60-123)||(45055317-45055380)
chr7 (65-123)||(8522324-8522382)
chr7 (68-122)||(10878921-10878975)
chr7 (65-123)||(12423845-12423903)
chr7 (65-123)||(34287773-34287831)
chr7 (65-123)||(38495170-38495228)
chr7 (65-123)||(41922282-41922340)
chr7 (65-123)||(43575306-43575364)
chr7 (65-123)||(45055578-45055636)
chr7 (58-123)||(8522568-8522633)
chr7 (67-108)||(8871502-8871543)
chr7 (59-108)||(28588311-28588360)
chr7 (62-123)||(32072202-32072263)
chr7 (90-123)||(37452478-37452511)
chr7 (63-123)||(7149289-7149349)
chr7 (80-108)||(10543682-10543710)
chr7 (59-123)||(11337886-11337950)
chr7 (60-108)||(19124826-19124874)
chr7 (63-123)||(20121204-20121264)
chr7 (59-123)||(20121461-20121525)
chr7 (60-108)||(23036642-23036690)
chr7 (56-108)||(29099445-29099497)
chr7 (59-99)||(29226572-29226612)
chr7 (63-123)||(31813728-31813788)
chr7 (59-123)||(41857135-41857199)
chr7 (63-123)||(41857396-41857456)
chr7 (67-123)||(45062318-45062374)
[»] scaffold0029 (3 HSPs)
scaffold0029 (53-123)||(136904-136974)
scaffold0029 (65-123)||(137201-137259)
scaffold0029 (142-191)||(137081-137130)
[»] scaffold0002 (3 HSPs)
scaffold0002 (53-123)||(330185-330255)
scaffold0002 (65-123)||(330482-330540)
scaffold0002 (142-191)||(330362-330411)
[»] scaffold0347 (2 HSPs)
scaffold0347 (65-121)||(12223-12279)
scaffold0347 (65-120)||(11940-11995)
[»] scaffold0311 (1 HSPs)
scaffold0311 (65-123)||(12884-12942)
[»] scaffold1577 (1 HSPs)
scaffold1577 (68-123)||(1159-1214)
[»] scaffold0592 (1 HSPs)
scaffold0592 (55-123)||(8644-8712)


Alignment Details
Target: chr6 (Bit Score: 65; Significance: 9e-29; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 6755268 - 6755204
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6755268 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 6755204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 3922890 - 3922826
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3922890 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 3922826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 33595670 - 33595607
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33595670 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 33595607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 3218486 - 3218428
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3218486 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 3218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 3922539 - 3922597
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3922539 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 3922597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 4243280 - 4243210
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  4243280 taataaattttaggcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatc 4243210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 23068696 - 23068754
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23068696 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 23068754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 33595320 - 33595377
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33595320 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgttctttatc 33595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 3218152 - 3218208
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3218152 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 3218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 14763653 - 14763595
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  14763653 ggcaaaattacacaattagtcccttaactttattttaggtaagactttcgtcctttatc 14763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 3218356 - 3218307
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3218356 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 3218307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 6755048 - 6755097
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6755048 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 6755097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 14763449 - 14763496
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763449 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 14763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 4242923 - 4242981
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  4242923 ggcaaaattacacaattagtcctttaattttattttaggtaacactttcgtcctttatc 4242981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 23069041 - 23068991
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23069041 ggcaaaattacacaattagtctcttaactttattttaggtaacactttcgt 23068991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 14763319 - 14763376
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14763319 gcaaaattatacaatcagtcccttaactttattttaggtaacactttcgtactttatc 14763376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 33595450 - 33595499
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33595450 caaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcct 33595499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 4243054 - 4243103
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  4243054 caaagaaatttgattttctagatttgtatgatgaagatttacgtttgcct 4243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 10026129 - 10026182
Alignment:
Q  54 aataattttttggcaaaattacacaattagtcccttaactttattttaggtaac 107  Q
    |||||||| |||||||||||||| || |||||||||||||| ||||||||||||    
T  10026129 aataatttcttggcaaaattacataaatagtcccttaacttaattttaggtaac 10026182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 14655078 - 14655134
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  14655078 caaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatc 14655134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 28852186 - 28852246
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||    
T  28852186 ttggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 28852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 10810321 - 10810263
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| |||| || ||||||||||||||| | || |||||||    
T  10810321 ggcaaaattacacaattagtcctttaatttaattttaggtaacactcttgtcctttatc 10810263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 3922753 - 3922704
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || || ||||||||||| ||||||||||||||    
T  3922753 caaagaaatttgattttatatgcgtgtatgatgaaaatttacgtttgcct 3922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 23068912 - 23068867
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgttt 187  Q
    ||||||||||||||||| || || ||||||||||||||||||||||    
T  23068912 caaagaaatttgattttatatgcgtgtatgatgaagatttacgttt 23068867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 2863575 - 2863638
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||   ||||||||||||||| |||| |||||||| ||| || |||||||    
T  2863575 tttttggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcctttatc 2863638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 2882878 - 2882941
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||   ||||||||||||||| |||| |||||||| ||| || |||||||    
T  2882878 tttttggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcctttatc 2882941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 7920473 - 7920528
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||| ||| |||||||||||||| |||||||||  |||||| |||||||||||||    
T  7920473 taatattttattggcaaaattacataattagtcctctaacttaattttaggtaaca 7920528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 22569074 - 22569019
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||    
T  22569074 aaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 22569019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 24896487 - 24896444
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||  || ||||||||||||||||||||||||||    
T  24896487 ggcaaaattacacttttggtcccttaactttattttaggtaaca 24896444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 30121639 - 30121584
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||| || |||| |||| || |||||||||||||||||||| |||||||    
T  30121639 aaaattacacatttcgtcctttaaattaattttaggtaacactttcgtcctttatc 30121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2316803 - 2316745
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  2316803 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 2316745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 9899195 - 9899253
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  9899195 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9899253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 9899509 - 9899451
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  9899509 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9899451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 13178537 - 13178479
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||   ||||||||||||||| ||||||||||||| ||| || |||||||    
T  13178537 ggcaaaattacagttttagtcccttaacttaattttaggtaacattttggtcctttatc 13178479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 1925465 - 1925408
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || ||||||    
T  1925465 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 1925408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 10027181 - 10027124
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||| ||||||| || |||||||||||||| ||||||||||||| ||| || ||||||    
T  10027181 ggcataattacataaatagtcccttaacttaattttaggtaacattttggtcctttat 10027124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 21926064 - 21926121
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || ||||||    
T  21926064 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 21926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 24325309 - 24325249
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||| ||||||||||| |||| |||||||| ||| || |||||||    
T  24325309 ttggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 24325249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 40834287 - 40834223
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40834287 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 40834223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 18485657 - 18485717
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18485657 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 18485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 20769706 - 20769770
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  20769706 ttttttggcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatc 20769770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 32936553 - 32936493
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32936553 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 32936493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 2094923 - 2094860
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  2094923 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatc 2094860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 35362983 - 35363042
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35362983 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 35363042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 35363340 - 35363277
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35363340 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 35363277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 30370507 - 30370561
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30370507 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 30370561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 40833936 - 40833994
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40833936 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 40833994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 7145527 - 7145591
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7145527 tttttaggcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 7145591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 30370858 - 30370798
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  30370858 ttggcaaaattacacaattagtcccttaactttattttaggcaacactttcgtcctttatc 30370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 19558219 - 19558160
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  19558219 tggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 19558160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 15179135 - 15179077
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  15179135 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 15179077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 20339156 - 20339214
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  20339156 ggcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatc 20339214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 32936206 - 32936264
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  32936206 ggcaaaattacacaattagtcacttaactttattttaggtaacactttcgtcctttatc 32936264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 32994500 - 32994442
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  32994500 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 32994442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 37093789 - 37093739
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37093789 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 37093739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 2094787 - 2094738
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2094787 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 2094738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 40834067 - 40834116
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40834067 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 40834116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 2094575 - 2094633
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  2094575 ggcaaaattacacaattaatcccttaactttattttaggtaacactttggtcctttatc 2094633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 13600444 - 13600502
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  13600444 ggcaaaattacacaattagtcctttacctttattttaggtaacactttcgtcctttatc 13600502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 13600791 - 13600733
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  13600791 ggcaaaattacacaattagtctcttaactttattgtaggtaacactttcgtcctttatc 13600733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 18486005 - 18485947
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18486005 ggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatc 18485947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 35362263 - 35362205
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  35362263 ggcaaaattacacaattagtcccttaacttaattttaggtaacgctttcgtcctttatc 35362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 3539811 - 3539762
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3539811 caaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcct 3539762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 27843020 - 27843081
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||    
T  27843020 tttggcaaaattacataattagtcccttaacttaattttaggtaacattttcgtcctttatc 27843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 35363198 - 35363149
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35363198 caaagaaatttgactttctaggcttgtatgatgaagatttacgtttgcct 35363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 20770056 - 20770000
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  20770056 caaaattacacaattagtcccttaacattattttaggtaacacttccgtcctttatc 20770000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 7145669 - 7145716
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 189  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  7145669 caaagaaatttgattttctatgcttgtatgatgaagatttacgtttgc 7145716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 7145884 - 7145826
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||    
T  7145884 ggcaaaattacataattaatcccttaactttattttaggtaacattttcgtcctttatc 7145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 13600660 - 13600611
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  13600660 caaagaaatttgattttctaggcttgtatgataaagatttgcgtttgcct 13600611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 18485874 - 18485825
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  18485874 caaagaaatttaattttctatgcttgtatgatgaagatttacgtttgcct 18485825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 20769843 - 20769892
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  20769843 caaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcct 20769892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 30370725 - 30370676
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  30370725 caaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 30370676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 32458132 - 32458075
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||    
T  32458132 ggcaaaattacacaattagtcccttaacttaattttaggtaacattttcatcctttat 32458075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 25363014 - 25363066
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  25363014 ttggcaaaattacacaaacagtcccttaacttaattttaggtaacactttcgt 25363066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 3539600 - 3539655
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  3539600 aaaattatacaattaatcccttaactttattttaggtaacattttcgtcctttatc 3539655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 3539946 - 3539884
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||| |||||||||| |||||||||| | ||| ||||||||||||||||||||||| ||||||    
T  3539946 ttttaggcaaaattatacaattagtctcataattttattttaggtaacactttcgtcctttat 3539884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 32936420 - 32936371
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||    
T  32936420 caaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 32936371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 33429853 - 33429789
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  33429853 ttttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 33429789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 132048 - 132103
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||| |||||||| || ||||||||||||| |||||| |||||||    
T  132048 aaaattacacaattaatcccttaatttaattttaggtaacattttcgtcctttatc 132103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 22621362 - 22621303
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||| ||||||||||| | ||| ||||||||||    
T  22621362 tggcaaaattacacttttagtcccttaacttaattttaggtaatagtttagttctttatc 22621303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 24858398 - 24858461
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||| ||| || |||||||    
T  24858398 tttttggcaaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatc 24858461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 25363361 - 25363303
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||| |||||| || ||||||| ||||| |||||| |||||||    
T  25363361 ggcaaaattacacaattagttccttaatttaattttagataacattttcgtcctttatc 25363303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 19131187 - 19131126
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  19131187 tttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 19131126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 2426227 - 2426287
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  2426227 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatc 2426287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 14871732 - 14871792
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  14871732 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 14871792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 39589613 - 39589673
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  39589613 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 39589673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 132259 - 132224
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagattt 181  Q
    |||||||||||||||||||| |||||||||||||||    
T  132259 gaaatttgattttctaggctagtatgatgaagattt 132224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 132392 - 132336
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||| ||||||||||  |||||||||  |||||||||||||||||| |||||||    
T  132392 ggcaaaattgcacaattagttacttaacttt--tttaggtaacactttcgtcctttatc 132336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 13455992 - 13455945
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||    
T  13455992 ttttggcaaaattacatttttagtcccttaacttaattttaggtaaca 13455945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 15178784 - 15178847
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||| | |||||||| ||||||| ||||||| ||| | |||||| |||||||    
T  15178784 tttttggcaaaattacgcgattagtcctttaacttaattttagataatattttcgtcctttatc 15178847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 35361922 - 35361969
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||||| ||||||||| | ||||||||||| ||||||    
T  35361922 aaaattacacaattagttccttaacttaaatttaggtaacattttcgt 35361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 35362128 - 35362093
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagattt 181  Q
    |||||||||||||||||||| |||||||||||||||    
T  35362128 gaaatttgattttctaggctagtatgatgaagattt 35362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 1643539 - 1643597
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  1643539 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 1643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 2467059 - 2467117
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||   ||||||||||||||| ||||||||||||| ||| || |||||||    
T  2467059 ggcaaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatc 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 16736801 - 16736859
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  16736801 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 16736859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 40952067 - 40952125
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  40952067 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 40952125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 14729450 - 14729491
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  14729450 caaaattacacttttagtcctttaactttattttaggtaaca 14729491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 19984579 - 19984534
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaac 107  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||    
T  19984579 tttggcaaaattacatttttagtcccttaacttaattttaggtaac 19984534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 32994158 - 32994219
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||| |||||||||||||||||||  ||||||| ||||||  ||||| |||||| ||||||    
T  32994158 ttttgacaaaattacacaattagtcgtttaacttaattttaaataacattttcgtcctttat 32994219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 3294640 - 3294584
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||| ||||  ||||||||||| |||||| |||||||||| || ||||||    
T  3294640 gcaaaattacaaaatttatcccttaacttaattttaagtaacacttttgtcctttat 3294584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 7601908 - 7601864
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||  ||||||||||||||| |||| ||||||||    
T  7601908 tggcaaaattacacttttagtcccttaacttaatttcaggtaaca 7601864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 16737120 - 16737076
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaa 106  Q
    ||||||||||||||||  ||||||||||||||| |||| ||||||    
T  16737120 tttggcaaaattacacttttagtcccttaacttaatttcaggtaa 16737076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 27843157 - 27843189
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaaga 178  Q
    |||||||||||||||||| ||||||||||||||    
T  27843157 gaaatttgattttctaggtttgtatgatgaaga 27843189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 30129791 - 30129731
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| ||||  ||||||| ||| || |||||||    
T  30129791 ttggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatc 30129731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 37092175 - 37092222
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||    
T  37092175 tttttggcaaa-ttacacttttagccccttaactttattttaggtaaca 37092222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 26202516 - 26202580
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26202516 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 26202580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 33692256 - 33692320
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33692256 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 33692320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 41689384 - 41689447
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41689384 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 41689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 9525799 - 9525860
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9525799 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 9525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 23163278 - 23163339
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23163278 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 23163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 52690454 - 52690385
Alignment:
Q  54 aataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  52690454 aatatttttttggcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 52690385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 2685975 - 2686035
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2685975 ataattttttggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgt 2686035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 28458873 - 28458809
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  28458873 ttttttggcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatc 28458809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 37872761 - 37872825
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  37872761 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 37872825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 13294953 - 13294890
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13294953 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 13294890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 20930975 - 20931033
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20930975 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 20931033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 23163625 - 23163567
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23163625 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 23163567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 49621439 - 49621497
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49621439 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 49621497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 49621783 - 49621725
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49621783 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 49621725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 42857157 - 42857089
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  42857157 ataatattatggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatc 42857089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 50161460 - 50161404
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50161460 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 50161404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 55140192 - 55140256
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  55140192 ttttttggcaaaattacacgattaatcccttaactttattttaggtaacactttcgtcctttatc 55140256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 21707949 - 21707890
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  21707949 tggcaaaattacacaattagtctcttaactttattttaggtaatactttcgttctttatc 21707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 33369509 - 33369564
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33369509 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 33369564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 46143622 - 46143559
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  46143622 tttttaggcaaaattacacaattagtgccttaactttattttaggtaacactttcgtcctttat 46143559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 50161118 - 50161173
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50161118 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 50161173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 21053641 - 21053583
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  21053641 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatc 21053583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 25297680 - 25297738
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25297680 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 25297738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 3546620 - 3546669
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3546620 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 3546669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 21053510 - 21053461
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21053510 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 21053461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 21707817 - 21707768
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21707817 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 21707768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 33369643 - 33369692
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33369643 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 33369692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 41689523 - 41689572
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41689523 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 41689572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 42856804 - 42856861
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  42856804 ggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttat 42856861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 55742739 - 55742788
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55742739 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 55742788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 30799295 - 30799350
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30799295 aaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 30799350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 55742620 - 55742671
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55742620 tggcaaaattacacaattagtcccttaactttattttaggtaacattttcgt 55742671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 9526154 - 9526096
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  9526154 ggcaaaataacacaattagtcccttaactttattttaggtaacactttcatcctttatc 9526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 30055207 - 30055265
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  30055207 tggcaaaattacacaattagtcccttaacttaattttaggtaacacttttgtcctttat 30055265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 33692607 - 33692557
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33692607 ggcaaaattacacaattagtcccttaattttattttaggtaacactttcgt 33692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 48419562 - 48419504
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  48419562 ggcaaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 48419504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 20931191 - 20931142
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20931191 caaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcct 20931142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 30055555 - 30055494
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  30055555 tttttaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtccttt 30055494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 30799668 - 30799611
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  30799668 gcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatc 30799611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 46143273 - 46143330
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  46143273 gcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatc 46143330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 48419431 - 48419382
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48419431 caaaaaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 48419382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 55742953 - 55742896
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  55742953 ggcaaaattacacaattagtcctttaactttattttagataacactttcgtcctttat 55742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 3546490 - 3546546
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  3546490 caaaattacataattagtcccttaactttattttaggtaacacttttgtcctttatc 3546546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 28458523 - 28458579
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  28458523 caaaattacacaattagtcccttaacattattttaggtaacacttccgtcctttatc 28458579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 33369854 - 33369799
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  33369854 aaaattacacaattagtctcttaactatattttaggtaacactttcgtcctttatc 33369799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 3546836 - 3546786
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3546836 ggcaaaattacacaattagtttcttaactttattttaggtaacactttcgt 3546786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 13294602 - 13294660
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  13294602 ggcaaaatagcacaattagtcccttaactttattttatgtaacactttcgtcctttatc 13294660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 20931323 - 20931265
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||    
T  20931323 ggcaaaattacacgattagttccttaactttattttagataacactttcgtcctttatc 20931265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 37872901 - 37872943
Alignment:
Q  149 atttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37872901 atttgattttctaggcttgtatgatgaagatttacgtttgcct 37872943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 52690096 - 52690154
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||    
T  52690096 ggcaaaattacacaattagtcgcttaactttattttaggtaatattttcgtcctttatc 52690154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 5260324 - 5260373
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  5260324 caaagaaatttgattttctatgcttgtatgatgaagatttacgtctgcct 5260373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 13294734 - 13294783
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  13294734 caaagaaatttgattttctatgcttgtatgatgaagatttacatttgcct 13294783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 28458736 - 28458687
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  28458736 caaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcct 28458687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 33692393 - 33692442
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  33692393 caaagaaatttgattttctaggcttgtatgatgaagatttgcatttgcct 33692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 42857016 - 42856967
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  42857016 caaaaaaatttgattttctaagcttgtatgatgaagatttacgtttgcct 42856967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 46143485 - 46143437
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46143485 caaagaaatttgattttctaggctt-tatgatgaagatttacgtttgcct 46143437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 50161331 - 50161282
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  50161331 caaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 50161282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 55140327 - 55140376
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  55140327 caaagaaatttgattttctaggcttgtataatgaagatttgcgtttgcct 55140376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 5260204 - 5260252
Alignment:
Q  75 cacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  5260204 cacaattagtcccttaactttattttaggtaacattttcgtcctttatc 5260252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 9526022 - 9525974
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||    
T  9526022 aaagaaatttgattttataagcttgtatgatgaagatttacgtttgcct 9525974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 52690310 - 52690266
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtt 186  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  52690310 caaagaaatttgattttctaggcttgtatgatgaagatttgcgtt 52690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 5260539 - 5260480
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||| |||||| |||||||    
T  5260539 tggcaaaattacataattagtcttttaactttattttaggtaacattttcgtcctttatc 5260480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 32488584 - 32488642
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  32488584 ggcaaaattacacttttagtcccttaactttattttaggtaacaatttagtcctttatc 32488642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 37873108 - 37873050
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| | |||||||||||||||||||||||| | ||||||||||| |||||||    
T  37873108 ggcaaaattatataattagtcccttaactttattttatgcaacactttcgtcctttatc 37873050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 23163494 - 23163445
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  23163494 caaagaaatttgattttatatgcttgtataatgaagatttacgtttgcct 23163445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 23549712 - 23549663
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  23549712 caaaaaaatttaattttctaggcttgtatgatgaagatttgcgtttgcct 23549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 45656012 - 45655963
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  45656012 ttttttggcaaaattacacttttagtcccttaacttaattttaggtaaca 45655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 49621570 - 49621619
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||    
T  49621570 caaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 49621619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 21360451 - 21360499
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaac 107  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||    
T  21360451 ttttttggcaaaattacataaatagtcccttaacttaattttaggtaac 21360499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 23963171 - 23963107
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    |||||||| ||| |||||||||  ||||||||||||||| ||||||||||||| |||||| ||||    
T  23963171 taatttttaggctaaattacacttttagtcccttaacttaattttaggtaacaatttcgtccttt 23963107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 55140541 - 55140485
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||| ||| |||||||||||||| |||| |||||||| ||||||    
T  55140541 gcaaaattacacaattaatcctttaactttattttaagtaatactttcgtcctttat 55140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 41689734 - 41689679
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||| ||||||||||||||||| |||| | |||||| |||||||    
T  41689734 aaaattacacaattagccccttaactttattttaagtaatattttcgtcctttatc 41689679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 23549846 - 23549788
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| || |||||| ||||||||||||||||| ||| |||||||| |||||||    
T  23549846 ggcaaaattatacgattagttccttaactttattttagataatactttcgtcctttatc 23549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 25298023 - 25297969
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||| | ||||||    
T  25298023 aaaattacacaattagtcccttaacttaattttaagtaacattttcatcctttat 25297969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 37068682 - 37068728
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||    
T  37068682 tttggcaaaattacacttttagtcccttaacttaattttaggtaaca 37068728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 26202653 - 26202698
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgttt 187  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  26202653 caaagaaatttaattttcttggcttgtatgatgaagatttgcgttt 26202698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 10993619 - 10993683
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  10993619 tttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 10993683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 21707605 - 21707661
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| |||||||| ||||||||||||||| |||| | ||||||| ||||||    
T  21707605 caaaattacataattagtctcttaactttattttaagtaatattttcgttttttatc 21707661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 31857896 - 31857837
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||| ||||||||| |||| |||||||| ||| ||||||||||    
T  31857896 tggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggttctttatc 31857837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 52538194 - 52538135
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  52538194 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 52653930 - 52653989
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  52653930 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52653989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 2686114 - 2686156
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||    
T  2686114 gaaatttgattttctaggctagtatgatgacgatttgcgtttg 2686156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 9902653 - 9902711
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  9902653 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9902711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 20983914 - 20983972
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  || |||||||||||||||||||||||| | ||| || |||||||    
T  20983914 ggcaaaattacacttttggtcccttaactttattttaggtaataatttagtcctttatc 20983972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 20984228 - 20984170
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  20984228 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 20984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 30799455 - 30799497
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| |||||||||| |||| ||||||    
T  30799455 gaaatttgattttctaggctagtatgatgaatatttgcgtttg 30799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 32922381 - 32922323
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  32922381 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 32922323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 52537875 - 52537937
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| ||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  52537875 ttttggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52537937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 52654246 - 52654188
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  52654246 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52654188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 112
Target Start/End: Original strand, 23549473 - 23549506
Alignment:
Q  79 attagtcccttaactttattttaggtaacacttt 112  Q
    |||||||||||||||||||||||||||| |||||    
T  23549473 attagtcccttaactttattttaggtaatacttt 23549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 32922065 - 32922110
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||    
T  32922065 ttggcaaaattacacttttagtcccttaacttaatttcaggtaaca 32922110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 43914443 - 43914488
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttc 113  Q
    |||||||||||||| |||||||||||| | ||||| ||||||||||    
T  43914443 aaaattacacaatttgtcccttaacttaaatttagataacactttc 43914488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 53232444 - 53232395
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||| |||||||||||| ||||||  ||| ||||||||    
T  53232444 gcaaaattacacaatttgtcccttaacttaattttatataatactttcgt 53232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 2686330 - 2686282
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttc 113  Q
    |||||||||||||||||| ||| ||||||| ||||||| ||||| ||||    
T  2686330 ggcaaaattacacaattaatcctttaacttaattttagctaacattttc 2686282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 9902972 - 9902912
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||| ||||||||||| |||| |||||||| ||| || |||||||    
T  9902972 ttggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 9902912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 44551227 - 44551171
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  44551227 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 44551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 53232099 - 53232147
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||  || |||||||| ||||||||||| ||||||||    
T  53232099 caaaattacacaattcatctcttaacttaattttaggtaatactttcgt 53232147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 49621334 - 49621274
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49621334 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 49621274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 22317076 - 22317007
Alignment:
Q  54 aataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  22317076 aatatttttttggcaaaattacacgattagtcccttaactttattttaggtaacactttcgtcctttatc 22317007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 37513438 - 37513378
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37513438 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 37513378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 8851804 - 8851862
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8851804 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 8851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 22316720 - 22316778
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22316720 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 22316778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 48434153 - 48434091
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48434153 tttttagcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 48434091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 36229756 - 36229821
Alignment:
Q  58 attttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36229756 atttattggtaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 36229821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 11121626 - 11121570
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11121626 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 11121570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 28830104 - 28830040
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  28830104 tttttaggcaaaattacacaattagtcccttaactttattttagctaacactttcgtcctttatc 28830040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 33491752 - 33491692
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  33491752 ttggcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 33491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 8852160 - 8852093
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8852160 taatttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatc 8852093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 22975688 - 22975633
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22975688 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 22975633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 25847445 - 25847503
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  25847445 ggcaaaattatacaattagtcccttaattttattttaggtaacactttcgttctttatc 25847503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 25847790 - 25847732
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  25847790 ggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatc 25847732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 49711401 - 49711459
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  49711401 ggcaaaattacacaattagtcccttaactttattttaggtaacacttacgtcctttatc 49711459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 9296383 - 9296440
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9296383 ggcaaaactacacaattagtcccttaactttattttaggtaacactttcgtcctttat 9296440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 22316851 - 22316900
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22316851 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 22316900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 22975476 - 22975525
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22975476 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 22975525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 55009447 - 55009386
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  55009447 tttgacaaaattacacaattagtcccttaactttattttaagtaacactttcgtcctttatc 55009386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 28829751 - 28829811
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  28829751 ttggcaaaattacacaattagttctttaactttattttaggtaacactttcgtcctttatc 28829811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 36230106 - 36230051
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  36230106 aaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatc 36230051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 48433801 - 48433856
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48433801 aaaattacgcaattagtcccttaactttattttaggtaacactttcgtcctttatc 48433856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 11121274 - 11121340
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  11121274 taatttttaggcaaaatagcacaattagtcccttaactttattttaggcaacactttcgtcctttat 11121340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 37513091 - 37513149
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  37513091 ggcaaaataacacaattagtcccttaactttattttaggtaacacttttgtcctttatc 37513149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 49711756 - 49711694
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49711756 taataatatttaagcaaaattacataattagtcccttaactttattttaggtaacactttcgt 49711694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9296596 - 9296547
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9296596 caaagaaatttgattttctaggcatgtatgatgaagatttacgtttgcct 9296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 23043535 - 23043478
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  23043535 ggcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttat 23043478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 37513223 - 37513271
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37513223 aaagaaatttgattttctaggcttgtatgatgaagatttacatttgcct 37513271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 49711613 - 49711565
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49711613 aaagaaatttgattttttaggcttgtatgatgaagatttacgtttgcct 49711565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 22975345 - 22975388
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22975345 ggcaaaattacacaattagtcccttaactttattttaggtaaca 22975388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 44506049 - 44506104
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  44506049 aaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatc 44506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 3612598 - 3612652
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||    
T  3612598 aaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttat 3612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 33491602 - 33491660
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  33491602 ggcaaaatgacacaattagttccttaactttattttaggtaacagtttcgtcctttatc 33491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 44506394 - 44506332
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  44506394 ttttgggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgtcctttat 44506332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 8852019 - 8851970
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  8852019 caaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcct 8851970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 17574373 - 17574430
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||    
T  17574373 ggcaaaattacacaattcgtccattaacttaattttaggtaacactttcgtcctttat 17574430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 23043176 - 23043241
Alignment:
Q  58 attttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| || ||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||    
T  23043176 atttttaggtaaaattacacaataagtcccataactttactttaggtaacactttcgtcctttatc 23043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 23043404 - 23043355
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  23043404 caaagaaatttgattttctaggcttgtatgatgaaggtttgcgtttgcct 23043355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 48434017 - 48433968
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  48434017 caaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 48433968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 49621109 - 49621158
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  49621109 caaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 49621158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 55009228 - 55009273
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgttt 187  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  55009228 caaagaaatttgattttctatgcttgtatgatgaagatttacgttt 55009273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 11121415 - 11121459
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgttt 187  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  11121415 aaagaaatttgattttctatgcttgtatgatgaagatttacgttt 11121459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 49620978 - 49621036
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||| |||| |||  ||||||||||||||||||||||||||| |||||||    
T  49620978 ggcaaaattacacgattaatcctctaactttattttaggtaacactttcgtcctttatc 49621036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 3612952 - 3612883
Alignment:
Q  54 aataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||| || ||||||||||||||||||   |||||| | ||||||||||||||||||||||||||    
T  3612952 aataaattttaggtaaaattacacaattagtcttgtaacttaactttaggtaacactttcgttctttatc 3612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 39778599 - 39778550
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  39778599 ttttttggcaaaattacacttttagtcccttaacttaattttaggtaaca 39778550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 49984925 - 49984876
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  49984925 caaagaaatttgattttctaagtttgtatgatgaatatttacgtttgcct 49984876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 10687936 - 10687880
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||| | |||||||    
T  10687936 caaaattacacaattcgtctcttaacttaattttaggtaacactttcatcctttatc 10687880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 39930631 - 39930691
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| |||||||||||| |||| ||||||| ||||||||||||||||| || |||||||    
T  39930631 ttggcataattacacaattcgtcctttaacttaattttaggtaacactttagtcctttatc 39930691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 41944200 - 41944132
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||| |||||||||||||  ||||||||||||||||||||||||||| | ||| || |||||||    
T  41944200 ataaattttaggcaaaattacacttttagtcccttaactttattttaggtaatagtttagtcctttatc 41944132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 20209145 - 20209208
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  20209145 tttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 20209208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 31574576 - 31574509
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  31574576 taatttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 31574509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 36229894 - 36229941
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 189  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||    
T  36229894 caaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgc 36229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 2862701 - 2862759
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||    
T  2862701 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 2862759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 3612807 - 3612765
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  3612807 gaaatttgattttctaggctagtatgatgaagatttgcgtttg 3612765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 55009099 - 55009156
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||  |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  55009099 ggcaaaatagcacaattagtct-ttaactttattttaggtaacactttcgtcctttatc 55009156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 11220990 - 11221035
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||    
T  11220990 ttggcaaaattacacttttagtcccttaacttaattttaggtaaca 11221035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 25847576 - 25847625
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||| | || || ||||||||||||||||||||||||||    
T  25847576 caaagaaatttgattctatatgcgtgtatgatgaagatttacgtttgcct 25847625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 28829883 - 28829928
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgttt 187  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||    
T  28829883 caaagaaatttaattttctaagcttgtatgatgaagatttgcgttt 28829928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 44664619 - 44664679
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  44664619 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttagtcctttatc 44664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 49002231 - 49002295
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||||||||||| | || |||||||| ||| || |||||||    
T  49002231 ttttttggcaaaattacacttttagtcccttaacttaacttcaggtaacagtttggtcctttatc 49002295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 49985038 - 49985006
Alignment:
Q  83 gtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||||||||||||||||||    
T  49985038 gtcccttaactttattttaggtaacactttcgt 49985006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 1342235 - 1342180
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||| || ||| ||||||||||||| |||||||    
T  1342235 aaaattacacaatttatcccttaacttaatattaagtaacactttcgtcctttatc 1342180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 14463438 - 14463379
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  14463438 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 14463379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 35850995 - 35850940
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctt 119  Q
    ||||||||||||| |||| |||  |||| || ||||||||||||||||||||||||    
T  35850995 tggcaaaattacataattcgtcttttaatttaattttaggtaacactttcgttctt 35850940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 44506181 - 44506216
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagattt 181  Q
    |||||||||||||||||||| |||||||||||||||    
T  44506181 gaaatttgattttctaggctagtatgatgaagattt 44506216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 50711174 - 50711127
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  50711174 ttttggcaaaattacacttttagtcccttaacttaatttcaggtaaca 50711127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 50711309 - 50711251
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  50711309 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 50711251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 53712236 - 53712294
Alignment:
Q  50 tagtaataattttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||| |||||||| || |||||||||   ||||||||||||||| |||||||||||||    
T  53712236 tagtagtaatttttaggtaaaattacagttttagtcccttaacttaattttaggtaaca 53712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 18169074 - 18169025
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||||  ||||||||||||||| |||| || |||||    
T  18169074 ttttttggcaaaattacacttttagtcccttaacttaatttcagataaca 18169025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 35415562 - 35415513
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||||||   ||||||||||||||| |||| ||||||||    
T  35415562 ttttttggcaaaattacatttttagtcccttaacttaatttcaggtaaca 35415513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 44664941 - 44664892
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||| |||||||||||||  |||||||||||| || |||||||||||||    
T  44664941 tttttaggcaaaattacacttttagtcccttaatttaattttaggtaaca 44664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 45567410 - 45567451
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||  ||||||||||||||| |||||||||||||    
T  45567410 caaaattacacttttagtcccttaacttaattttaggtaaca 45567451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 51001614 - 51001569
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaa 106  Q
    ||||||||||| |||| || |||||||||||||| |||||||||||    
T  51001614 ttttggcaaaactacataaatagtcccttaacttaattttaggtaa 51001569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 11989517 - 11989573
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||| ||||||||||| | ||| || |||||||    
T  11989517 caaaattacacttttagtcccttaacttaattttaggtaataatttggtcctttatc 11989573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 14626451 - 14626407
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||  |||||| ||||| ||||||||||||||||    
T  14626451 tggcaaaattacacttttagtctcttaattttattttaggtaaca 14626407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 38675297 - 38675237
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||| | |||| |||||||| ||| || |||||||    
T  38675297 ttggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatc 38675237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 9e-26; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 10044740 - 10044803
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10044740 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 10044803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 10108808 - 10108863
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10108808 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 10108863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2318835 - 2318777
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2318835 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 2318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 9320148 - 9320090
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9320148 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 9320090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 18916625 - 18916683
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18916625 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 18916683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 18916970 - 18916912
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18916970 ggcaaaattacataattagtcccttaactttattttaggtaacactttcgttctttatc 18916912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 20364319 - 20364259
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  20364319 tttggcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttat 20364259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 27360473 - 27360409
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  27360473 tttttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 27360409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 17846358 - 17846295
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  17846358 ttttaggcaaaattatacaattagtcccttaactttattttaggtaacactttcgtcctttatc 17846295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 601678 - 601620
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  601678 ggcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatc 601620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 4261501 - 4261443
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4261501 ggcaaaattacacaattagtccgttaactttattttaggtaacactttcgtcctttatc 4261443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 17846008 - 17846066
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  17846008 ggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 17846066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 20364185 - 20364136
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20364185 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 20364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 27360252 - 27360301
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27360252 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 27360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 9319804 - 9319860
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9319804 caaaactacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 9319860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 44536540 - 44536472
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  44536540 ataaattttaggtaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatc 44536472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 4261156 - 4261211
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  4261156 aaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatc 4261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 20363969 - 20364028
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  20363969 tggcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatc 20364028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 2318492 - 2318550
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2318492 tggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttat 2318550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 5547393 - 5547339
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  5547393 aaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 5547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 18178439 - 18178377
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  18178439 tttttggcaaaattacacaattagtcctttaactttatattaggtaatactttcgtcctttat 18178377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 2318623 - 2318672
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2318623 caaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcct 2318672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9320017 - 9319968
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9320017 caaagaaatttgattttctagacttgtatgatgaagatttacgtttgcct 9319968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 10044876 - 10044925
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10044876 caaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcct 10044925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 17846139 - 17846188
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17846139 caaagaaatttgattttctagacttgtatgatgaagatttacgtttgcct 17846188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 27360119 - 27360176
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  27360119 ggcaaaattacacaattagtcccttaactttattttaggtaatattttcgtcctttat 27360176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 44536398 - 44536349
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44536398 caaagaaatttgattttctaggcttgtatgatgaagatttacatttgcct 44536349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 30337422 - 30337482
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  30337422 ttggcaaaattacacaattagtccattaacttaattttaggtaacattttcgtcctttatc 30337482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 10045096 - 10045035
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||    
T  10045096 ttttggcaaaattacgcaattagtcccttaacttt-ttttagttaacactttcgtcctttatc 10045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 10108945 - 10108994
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  10108945 caaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcct 10108994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 601326 - 601386
Alignment:
Q  64 tggcaaaattacacaattagtccctt-aactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||    
T  601326 tggcaaaattacacaattaatctctttaactttattttaggtaacactttcgtcctttatc 601386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 10109160 - 10109104
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||    
T  10109160 gcaaaattacgcacttagtcccttaactttattttagttaacactttcgtcctttat 10109104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 8322528 - 8322470
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| |||| |||||||||||| ||||||||||||| |||||| |||||||    
T  8322528 ggcaaaattacagaattcgtcccttaacttaattttaggtaacattttcgtcctttatc 8322470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 44536179 - 44536237
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||| ||| |||||||    
T  44536179 ggcaatattgcacaattagtcctttaactttattttaggtaacacttccgtcctttatc 44536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 5547096 - 5547145
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  5547096 ttttttagcaaaattacacaattagtcccttaacttaattttagataaca 5547145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 18916756 - 18916805
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||    
T  18916756 caaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 18916805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 4261284 - 4261328
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtt 186  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  4261284 caaagaaattagattttctaggcttgtatgatgaagatttgcgtt 4261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 8236688 - 8236748
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||| |||| |||| ||||||| |||||| |||||||||||||||||||||    
T  8236688 ttggaaaaattacaaaattcgtccattaacttaattttaagtaacactttcgttctttatc 8236748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 10714007 - 10714066
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  || |||||||||||||||||||||||||| ||| || |||||||    
T  10714007 tggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatc 10714066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 30337774 - 30337716
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||| | |||| |||||||    
T  30337774 ggcaaaattacagaattagtcccttaacttaattttagataacattatcgtcctttatc 30337716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 981781 - 981822
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaa 106  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  981781 ggcaaaattacacaatttgtcccttaacttaattttaggtaa 981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 1479334 - 1479273
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||| ||  |||||| |||||||| |||||||||||||| || |||||||||    
T  1479334 ttttggcaaaattatacttttagtctcttaacttaattttaggtaacaccttggttctttat 1479273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 33274710 - 33274653
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||    
T  33274710 gcaaaattacacttttagtcccttaacttaattttaggtaacaatttggtcctttatc 33274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 29154054 - 29154122
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||| |||||||||||||  ||||||||||||||| |||| || ||||| ||| || |||||||    
T  29154054 ataatttttaggcaaaattacacttttagtcccttaacttaatttcagttaacaatttggtcctttatc 29154122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 35412193 - 35412133
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  35412193 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 35412133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 13862496 - 13862551
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||| |||| ||||||| |||||| |||| |||||||| |||||||    
T  13862496 aaaattacacaattcgtcctttaacttaattttaagtaatactttcgtcctttatc 13862551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 26499726 - 26499667
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  26499726 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 26499667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 40710311 - 40710374
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||| |||||||||||| |||| |||||| | |||| | |||||||    
T  40710311 ttttaggcaaaattacacaattcgtcccttaacttaatttcaggtaatattttcatcctttatc 40710374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 1650817 - 1650759
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  1650817 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagttttgtcctttatc 1650759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 11723705 - 11723763
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||   |||||||||||||||||||| |||||||| ||| || |||||||    
T  11723705 ggcaaaattacatttttagtcccttaactttatttcaggtaacagtttggtcctttatc 11723763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 30488394 - 30488336
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  30488394 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 30488336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 601460 - 601509
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| ||  ||| |||||||||||||||| |||||||    
T  601460 caaagaaatttgattttatatacttttatgatgaagatttacatttgcct 601509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 21254398 - 21254349
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacacttt 112  Q
    ||||||||||||||  |||||||||||||||| |||| | ||||||||||    
T  21254398 ttggcaaaattacatcattagtcccttaacttaatttcaagtaacacttt 21254349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 26499422 - 26499479
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || ||||||    
T  26499422 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 26499479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 28789180 - 28789123
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  28789180 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 28789123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 31769782 - 31769839
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||| ||||| ||| |||||||| ||||||||||| ||||| || ||||||    
T  31769782 ggcaaaattacgcaattcgtctcttaacttaattttaggtaatactttagtcctttat 31769839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 341306 - 341370
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| ||||||||||||   ||||||||||||||| |||| |||||||| ||| || |||||||    
T  341306 tttttaggcaaaattacagttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 20663970 - 20663914
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  20663970 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 20663914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 21251784 - 21251832
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||| |||| | ||||| |||| |||||||||||||||    
T  21251784 caaaattacacaatttgtccatgaacttaatttcaggtaacactttcgt 21251832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 23926389 - 23926441
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||  ||||| ||||||||| |||| |||||||| ||||||    
T  23926389 ttggcaaaattacacttttagttccttaacttaatttcaggtaacagtttcgt 23926441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 38574938 - 38574874
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||   ||||||||||||||| |||| | |||||| ||| || |||||||    
T  38574938 ttttttggcaaaattacatttttagtcccttaacttaatttcatgtaacagtttggtcctttatc 38574874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 40902322 - 40902385
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40902322 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 40902385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 2027071 - 2027007
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  2027071 ttttttggcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatc 2027007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 12139372 - 12139312
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12139372 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 12139312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 2026721 - 2026779
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2026721 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 2026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 30563129 - 30563071
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30563129 ggcaaaattacacgattagtcccttaactttattttaggtaacactttcgttctttatc 30563071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 7113865 - 7113922
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7113865 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 7113922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 1549321 - 1549385
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1549321 tttttaggcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 1549385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 17611408 - 17611483
Alignment:
Q  48 gttagtaataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  17611408 gttaataataaaatttaggcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatc 17611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 17611775 - 17611712
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  17611775 ttttaggcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttatc 17611712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 30562779 - 30562842
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30562779 ttttaggcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 30562842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 25780231 - 25780177
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25780231 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 25780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 30562914 - 30562963
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30562914 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 30562963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 1549459 - 1549507
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1549459 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 1549507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 19897170 - 19897234
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  19897170 ttttttggcaaaattatacaattagtcccttaacttaattttaggtaacattttcgtcctttatc 19897234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 25779887 - 25779943
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  25779887 caaaattacacaattagtcccttaactttattttagataacactttcgtcctttatc 25779943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 7114210 - 7114151
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  7114210 ttggcaaaattacacaattagtccattaactttattttagataacactttcgtcctttat 7114151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 17985290 - 17985345
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  17985290 aaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 17985345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 12115297 - 12115239
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  12115297 ggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatc 12115239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 2026852 - 2026901
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2026852 caaagaaatttgattttctaggcttgtatgaagaagatttacgtttgcct 2026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 12139024 - 12139081
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  12139024 ggcaaaattacacaattagtctcttaattttattttaggtaatactttcgttctttat 12139081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 17611639 - 17611590
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17611639 caaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcct 17611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 40902542 - 40902493
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40902542 caaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcct 40902493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 17985639 - 17985575
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  17985639 tttttaggcaaaatagcacaattagtcccttaactttattttaggtaacattttcgtcctttatc 17985575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 30002423 - 30002375
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30002423 aaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcct 30002375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 30002552 - 30002496
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  30002552 caaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 30002496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 25780104 - 25780057
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 189  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25780104 caaagaaatttgattttctaagcttgtatgatgaagatttacgtttgc 25780057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 30002214 - 30002269
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  30002214 aaaattacacaattagtcccttaactttattttatgtaacacttttgtcctttatc 30002269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 7114078 - 7114029
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  7114078 caaataaatttgattttttaggcttgtatgatgaagatttacgtttgcct 7114029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 17985503 - 17985454
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  17985503 caaagaaatttgattttctatgcttgtatgatgaagatttacgattgcct 17985454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 7349760 - 7349828
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||  ||||||||||||||| |||| || ||||||||| || |||||||    
T  7349760 ataattttttggcaaaattacacttttagtcccttaacttaatttcagataacactttggtcctttatc 7349828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 34480504 - 34480440
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  |||||||||||||||||||||| |||||| ||| || |||||||    
T  34480504 ttttttggcaaaattacacttttagtcccttaactttattttaagtaacaatttagtcctttatc 34480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 40902663 - 40902615
Alignment:
Q  75 cacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||    
T  40902663 cacaattagtcccttaactttattttaggtaacacttttgtcctttatc 40902615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 8853084 - 8853139
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  8853084 taataattttttggcaaaattacacttttagtcccttaacttaatttcaggtaaca 8853139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 12139155 - 12139202
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 189  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  12139155 caaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgc 12139202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 4969360 - 4969422
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||| | || |||||| ||||||| |||||||||||||||||||| |||||||    
T  4969360 ttttggcaaaattatataaatagtcctttaacttaattttaggtaacactttcgtcctttatc 4969422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 19897524 - 19897466
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| |||||| |||||||||| || ||||||||||||||||| |||||||    
T  19897524 ggcaaaattacataattagccccttaacttaatcttaggtaacactttcgtcctttatc 19897466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 40290127 - 40290077
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  40290127 ggcaaaattacataattagtcccttaacttaattttaggtaacattttcgt 40290077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 12114954 - 12115010
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||| | |||||||    
T  12114954 caaaattacataattagtcccttaacttaattttaggtaacattttcatcctttatc 12115010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 39672830 - 39672894
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  39672830 ttttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatc 39672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 49564659 - 49564599
Alignment:
Q  61 ttttggcaaaattacacaattagtccctt-aactttattttaggtaacactttcgttcttt 120  Q
    ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||| ||||    
T  49564659 ttttggcaaaattacacaatttgtccttttaacttaattttaggtaacactttcgtccttt 49564599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 26874538 - 26874483
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  26874538 aaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatc 26874483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 4969710 - 4969652
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||| ||| || |||||||    
T  4969710 ggcaaaattacacaattagtcacttaacttaattttagataacatttttgtcctttatc 4969652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5586487 - 5586545
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  || |||||||||||||||||||||||||| ||| || |||||||    
T  5586487 ggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatc 5586545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 28554186 - 28554248
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  28554186 ttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 28554248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 31289250 - 31289312
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  31289250 ttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 31289312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 35521521 - 35521463
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||    
T  35521521 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 35521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 49564185 - 49564243
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||| ||| |||||||| |||| |||||||||||| || |||||||    
T  49564185 ggcaaaattacacaattcgtctcttaacttaatttcaggtaacacttttgtcctttatc 49564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 6489196 - 6489143
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||| | ||||||||||||   |||||||||||||||||||||||||||||    
T  6489196 ataatttataggcaaaattacaattttagtcccttaactttattttaggtaaca 6489143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 4695252 - 4695192
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  4695252 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 4695192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 5618390 - 5618327
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||| ||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  5618390 tttttggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 5618327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 12115088 - 12115123
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagattt 181  Q
    |||||||||||||||||||| |||||||||||||||    
T  12115088 gaaatttgattttctaggctagtatgatgaagattt 12115123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 24234856 - 24234809
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaa 106  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||||    
T  24234856 ttttttggcaaaattacaattttagtcccttaacttaattttaggtaa 24234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 40934737 - 40934674
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||| ||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  40934737 tttttggtaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 40934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 45315555 - 45315512
Alignment:
Q  80 ttagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||| ||| || |||||||    
T  45315555 ttagtcccttaactttattttaggtaacaatttagtcctttatc 45315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5618071 - 5618129
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  5618071 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 5618129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 25267181 - 25267239
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||| | ||||| |||||||| || ||||||| |||||||||||| |||||||    
T  25267181 ggcaaaattatataattaatcccttaatttaattttagataacactttcgtcctttatc 25267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 29233687 - 29233745
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||  ||||| ||| ||||||||||||||| |||||||| |||| |||||||    
T  29233687 ggcaaaattatccaattggtctcttaactttattttaagtaacactctcgtcctttatc 29233745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 34480184 - 34480242
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  34480184 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 34480242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 8853409 - 8853352
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || ||||||    
T  8853409 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 8853352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 9172902 - 9172857
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacacttt 112  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||    
T  9172902 caaaattacacaattcatcctttaacttaattttaggtaacacttt 9172857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 9180884 - 9180839
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacacttt 112  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||    
T  9180884 caaaattacacaattcatcctttaacttaattttaggtaacacttt 9180839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 25267498 - 25267441
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||| |||| |||| |||||||| ||||||| |||||||||| | ||||||    
T  25267498 ggcaaaattacgcaatcagtctcttaacttaattttagataacactttcatcctttat 25267441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 40934413 - 40934474
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||  ||||||| ||||||| ||||| ||||||| ||| || |||||||    
T  40934413 tttggcaaaattacacttttagtccattaacttaattttgggtaacagtttggtcctttatc 40934474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 12649924 - 12649980
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  12649924 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 12649980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 39673148 - 39673092
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||| ||||||| ||||| ||| || |||||||    
T  39673148 caaaattacacttttagtcccttaacttaattttagataacagtttggtcctttatc 39673092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 30904708 - 30904647
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30904708 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 30904647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 14577217 - 14577153
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14577217 tttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 14577153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 17875763 - 17875826
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17875763 tttttgggaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 17875826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 35483052 - 35482989
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35483052 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 35482989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2968215 - 2968157
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2968215 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 2968157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 10682061 - 10682119
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10682061 ggcaaaattacacaattaatcccttaactttattttaggtaacactttcgttctttatc 10682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 17876115 - 17876057
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17876115 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 17876057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 27912443 - 27912385
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27912443 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 27912385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 27958862 - 27958804
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27958862 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 27958804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 35482702 - 35482760
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35482702 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 35482760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 27912086 - 27912153
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27912086 taatttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatc 27912153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 27958505 - 27958572
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27958505 taatttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatc 27958572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 30928659 - 30928600
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30928659 tggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 30928600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 30904361 - 30904419
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  30904361 ggcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatc 30904419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 10682274 - 10682225
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10682274 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 10682225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 20178371 - 20178428
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20178371 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 20223099 - 20223156
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20223099 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20223156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 30904575 - 30904526
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30904575 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 30904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 17844224 - 17844169
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  17844224 caaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 17844169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 20223453 - 20223394
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  20223453 tggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgttctttatc 20223394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 44379521 - 44379580
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  44379521 tggcaaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatc 44379580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 3691582 - 3691640
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  3691582 ggcaaaattacacaattagtcccttaacataattttaggtaacactttcgtcctttatc 3691640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 10682402 - 10682349
Alignment:
Q  69 aaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  10682402 aaattacacaattagtcccttaactttattttaggaaacactttcgtcctttat 10682349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 30253946 - 30253882
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  30253946 ttttttggcaaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatc 30253882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 2967865 - 2967920
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  2967865 ttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgt 2967920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 38464987 - 38464925
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| |||||||    
T  38464987 tttttggcaaaattacacaattcatccctta-ctttattttaggtaacactttcgtcctttatc 38464925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 13327261 - 13327319
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||| | ||||||    
T  13327261 tggcaaaattacacaattagttccttaacttaattttaggtaacactttcatcctttat 13327319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 23792925 - 23792867
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  23792925 ggcaaaataacacaattagtcccttaacttaattttaggtaacacttttgtcctttatc 23792867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 27912228 - 27912276
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  27912228 aaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcct 27912276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 27958647 - 27958695
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  27958647 aaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcct 27958695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 21661042 - 21660999
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaac 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21661042 tggcaaaattacacatttagtcccttaactttattttaggtaac 21660999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 30928315 - 30928370
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| || ||||||    
T  30928315 caaaattacacaattagtcccttaacttaattttaggtaacatttttgtcctttat 30928370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 3691931 - 3691873
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||| |||||| |||| ||||||||||||| |||||| |||||||    
T  3691931 ggcaaaattacacaattaatcccttcacttaattttaggtaacattttcgtcctttatc 3691873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 20223240 - 20223282
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  20223240 gaaatttgattttctaggctagtatgatgaagatttacgtttg 20223282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 2968002 - 2968051
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  2968002 caaagaaatttgattttctatgcttctatgatgaagatttatgtttgcct 2968051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 27523311 - 27523243
Alignment:
Q  54 aataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||  ||||||||||||||||| |||| ||||||| ||||||| |||||||||| | ||||||    
T  27523311 aataattttaaggcaaaattacacaattcgtcctttaacttaattttagttaacactttcatcctttat 27523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 37727193 - 37727257
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||| |||||||||||  |||||||||||||||||||| |||||||| ||| || |||||||    
T  37727193 ttttttgacaaaattacacttttagtcccttaactttatttcaggtaacagtttagtcctttatc 37727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 42684781 - 42684845
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  42684781 tttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggttctttatc 42684845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 44379876 - 44379814
Alignment:
Q  64 tggcaaaattacacaat---tagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||   |||| ||||||||| ||||||||||||| ||||||||||||||    
T  44379876 tggcaaaattacacaataattagttccttaacttaattttaggtaacattttcgttctttatc 44379814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 27713083 - 27713020
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  27713083 tttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 27713020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 28828531 - 28828472
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||||||||||||||| | ||| || |||||||    
T  28828531 tggcaaaattacacttttagtcccttaactttattttaggtaataatttagtcctttatc 28828472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 34213388 - 34213443
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  34213388 aaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatc 34213443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 17844093 - 17844051
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  17844093 gaaatttgattttataggcttgtatgatgaagatttgcgtttg 17844051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 30463914 - 30463972
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||   ||||||||||||||||||||||||||||| ||| || |||||||    
T  30463914 ggcaaaattacatttttagtcccttaactttattttaggtaacagtttagtcctttatc 30463972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 30928524 - 30928482
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  30928524 gaaatttgattttctaggctggtatgatgaagatttgcgtttg 30928482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 34199153 - 34199091
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||  | ||||||||||||| ||||||||||||| ||| || |||||||    
T  34199153 ttttggcaaaattacactttcagtcccttaacttaattttaggtaacagtttggtcctttatc 34199091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 44379657 - 44379699
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  44379657 gaaatttgattttctaggctagtatgatgaagatttgcgtttg 44379699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 13327610 - 13327558
Alignment:
Q  65 ggcaaaattacacaattagtcccttaac--tttattttaggtaacactttcgt 115  Q
    ||||||||||| ||||||||||||||||  || ||||||||||||||||||||    
T  13327610 ggcaaaattacgcaattagtcccttaacaattaattttaggtaacactttcgt 13327558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 17875899 - 17875948
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||| ||||||||| |||||||||||||||||| | |||||||    
T  17875899 caaagaaatttaattttctagacttgtatgatgaagatttgcatttgcct 17875948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 35482833 - 35482882
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||| |||||| || || ||||||||||||||||||||||||||    
T  35482833 caaagaaattcgattttatatgcgtgtatgatgaagatttacgtttgcct 35482882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 42123703 - 42123760
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||| ||||||| ||| | |||| | |||||||    
T  42123703 gcaaaattacacaattagtcccttaacttaattttagataatattttcatcctttatc 42123760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 4128739 - 4128799
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||  ||| ||||||||||| |||| || |||||||||||||||||||| |||||||    
T  4128739 ttggcaattttaaacaattagtcctttaatttaattttaggtaacactttcgtcctttatc 4128799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 10925416 - 10925376
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggta 105  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  10925416 ggcaaaattacacttttagtcccttaactttattttaggta 10925376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 11976297 - 11976337
Alignment:
Q  16 aaaatattagttagtaaaaatactgttagttagttagtaat 56  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  11976297 aaaatattagttagtaaaaatagtgttggttagttagtaat 11976337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 13795516 - 13795564
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||||||||||||| |||||||||||| ||||||| ||||| ||||||    
T  13795516 caaaattacacaattcgtcccttaacttaattttagctaacattttcgt 13795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 38464639 - 38464699
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||| | |||||||||||| | || |||||||||||| || |||||||    
T  38464639 ttggcaaaattacacaactcgtcccttaacttaaattcaggtaacacttttgtcctttatc 38464699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 42124056 - 42124000
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    ||||| |||||||||||||||||| |  ||||| || ||||||||||||||||||||    
T  42124056 tttttaggcaaaattacacaattaatttcttaatttaattttaggtaacactttcgt 42124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 148288 - 148351
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||||||||||||  || |||||||||||| ||||||||||||| ||| || |||||||    
T  148288 ttttaggcaaaattacacttttggtcccttaacttaattttaggtaacaatttggtcctttatc 148351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 14577010 - 14577045
Alignment:
Q  156 tttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||| |||||||||    
T  14577010 tttctaggcttgtatgatgaagatttgcgtttgcct 14577045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 26938496 - 26938441
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||  ||||||||||||||| ||||||||||||| ||| || ||||||    
T  26938496 caaaattacacttttagtcccttaacttaattttaggtaacaatttagtcctttat 26938441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 27712767 - 27712822
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||  |||||||||||| |||||||||||||||| ||| || |||||||    
T  27712767 aaaattacacttttagtcccttaattttattttaggtaacagtttagtcctttatc 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 4128876 - 4128918
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    ||||||||||||||||| || ||||||||||||||| ||||||    
T  4128876 gaaatttgattttctagactagtatgatgaagatttgcgtttg 4128918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 6078070 - 6078136
Alignment:
Q  54 aataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    |||| ||| ||| ||||||  ||||||| |||||||||||| ||||||| |||||||||| ||||||    
T  6078070 aatagtttattgacaaaatcgcacaattcgtcccttaacttaattttagataacactttcattcttt 6078136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 13327472 - 13327438
Alignment:
Q  147 aaatttgattttctaggcttgtatgatgaagattt 181  Q
    ||||||||||| |||||||||||||||||||||||    
T  13327472 aaatttgatttgctaggcttgtatgatgaagattt 13327438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 21660726 - 21660784
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  21660726 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 21660784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 23792791 - 23792749
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||    
T  23792791 gaaatttgattttcttggctagtatgatgaagatttgcgtttg 23792749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 33279252 - 33279194
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  33279252 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 33279194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 34632225 - 34632283
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||  ||||||||||||||||||||||||| ||| || |||||||    
T  34632225 ggcaaaattacacttttgatcccttaactttattttaggtaacaatttagtcctttatc 34632283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 36556861 - 36556791
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||| ||| ||||||||||||   ||||||||||||||| |||| |||||||| ||| || |||||||    
T  36556861 taataatatttaggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 36556791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 40277548 - 40277502
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaa 106  Q
    ||||||||||||||||||  |||||| |||||||| |||||||||||    
T  40277548 tttttggcaaaattacacttttagtcacttaacttaattttaggtaa 40277502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 42123912 - 42123870
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||    
T  42123912 gaaatttgattttctaggctagtatgatgaaggtttgcgtttg 42123870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 7899896 - 7899937
Alignment:
Q  147 aaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||    
T  7899896 aaatttgattttctaggctagtatgatgacgatttgcgtttg 7899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 29596403 - 29596460
Alignment:
Q  66 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  29596403 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 29596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 18806056 - 18806004
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    ||||||||||  |||||||||| |||| ||||||||||||| ||| |||||||    
T  18806056 aaaattacacttttagtccctttacttaattttaggtaacaatttggttcttt 18806004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 32063755 - 32063715
Alignment:
Q  83 gtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  32063755 gtcccttaagttaattttaggtaacaatttcgttctttatc 32063715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 39198615 - 39198671
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttta 121  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||    
T  39198615 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttta 39198671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 28408591 - 28408528
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28408591 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 28408528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 32523553 - 32523490
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32523553 tttttgccaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 32523490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 7417857 - 7417799
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7417857 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 7417799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 19305740 - 19305798
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19305740 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 19305798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 49114208 - 49114150
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49114208 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 49114150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 1511540 - 1511474
Alignment:
Q  57 aattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  1511540 aatttttaggcaaaattacacaattagtcccttaacttaaatttaggtaacactttcgtcctttatc 1511474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 8437305 - 8437363
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  8437305 ggcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatc 8437363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 8437651 - 8437593
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  8437651 ggcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttatc 8437593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 10878625 - 10878683
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10878625 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 10878683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 49113862 - 49113920
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  49113862 ggcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttatc 49113920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 32523332 - 32523381
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32523332 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 32523381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 37453415 - 37453354
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  37453415 tttgacaaaattacacaatcagtcccttaactttattttaggtaacactttcgtcctttatc 37453354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 44307611 - 44307668
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44307611 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 44307668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 28408244 - 28408300
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  28408244 caaaattacacaattagccccttaactttattttaggtaacactttcgtcctttatc 28408300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 2933289 - 2933344
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  2933289 aaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatc 2933344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 7417510 - 7417569
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  7417510 tggcaaaattacacaattaatcccttaactttattttaggtaacattttcgtcctttatc 7417569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 32178197 - 32178142
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  32178197 aaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatc 32178142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 32832576 - 32832521
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  32832576 aaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatc 32832521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 37453281 - 37453234
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37453281 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 37453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 44307965 - 44307906
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  44307965 tggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgttctttatc 44307906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 32177855 - 32177913
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  32177855 ggcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttatc 32177913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 8437519 - 8437470
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8437519 caaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcct 8437470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 31894258 - 31894315
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  31894258 ggcaaaattacacaaatagtcccttaacttaattttaggtaacactttcgtcctttat 31894315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 32177986 - 32178035
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32177986 caaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcct 32178035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 45746938 - 45746889
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45746938 caaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcct 45746889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 1511188 - 1511247
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||    
T  1511188 ttggcaaaattacacaattagtcccttaacttaattttaggtaatattttcgtcctttat 1511247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 32523212 - 32523259
Alignment:
Q  76 acaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  32523212 acaattagtcccttaactttattttaggtaacactttcgtcctttatc 32523259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 2933619 - 2933557
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  2933619 ttttaggcaaaatagcacaattagttccttaactttattttaggtaacactttcgtcctttat 2933557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 19306089 - 19306031
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  19306089 ggcaaaatagcacaattagtcccttaactttattttagttaacactttcgtcctttatc 19306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 19305958 - 19305909
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19305958 caaagaaatttgattttctatgcttgtatgatgaagatttatgtttgcct 19305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 31894600 - 31894543
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||    
T  31894600 ggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttat 31894543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 45747076 - 45747011
Alignment:
Q  58 attttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| |||||||||| |||||||||  ||||| ||||||||||||||||||||||| |||||||    
T  45747076 atttttaggcaaaattatacaattagtttcttaattttattttaggtaacactttcgtcctttatc 45747011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 7417644 - 7417692
Alignment:
Q  143 aaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  7417644 aaagaaatttgattttctagacttgtatgatgaagatttgcgtttgcct 7417692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 21733055 - 21733111
Alignment:
Q  52 gtaataattttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||    
T  21733055 gtaataattttgtggcaaaattacactattagtcccttaacttaatttcaggtaaca 21733111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 49113993 - 49114037
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtt 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  49113993 caaagaaatttgattttccaggcttgtatgatgaagatttacgtt 49114037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 44307752 - 44307794
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  44307752 gaaatttgattttctaggctagtatgatgaagatttacgtttg 44307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 28408373 - 28408422
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||    
T  28408373 caaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 28408422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 32832232 - 32832281
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacacttt 112  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  32832232 ttggcaaaataatacaattagtcccttaattttattttaggtaacacttt 32832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 32832366 - 32832411
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgttt 187  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||    
T  32832366 caaagaaatttgattttctatgcttgtatgatgaaaatttacgttt 32832411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 8114575 - 8114631
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtt 116  Q
    |||||||||||||||||||| |  ||||||||||| |||||||||||| ||||||||    
T  8114575 tttttggcaaaattacacaaattatcccttaacttaattttaggtaactctttcgtt 8114631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 31283473 - 31283409
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||||||||||| |||||| |||||| ||| || |||||||    
T  31283473 ttttttggcaaaattacacttttagtcccttaacttaattttatgtaacagtttggtcctttatc 31283409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 1511397 - 1511355
Alignment:
Q  146 gaaatttgattttctaggcttgtatgatgaagatttacgtttg 188  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  1511397 gaaatttgattttctaggttagtatgatgaagatttacgtttg 1511355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 7172931 - 7172989
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  || |||||||||||||||||||||||||| ||| || |||||||    
T  7172931 ggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatc 7172989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 24986729 - 24986775
Alignment:
Q  76 acaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  24986729 acaattagtcctttaattttattttaggtaacactttcgtcctttat 24986775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 47222021 - 47221951
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| |||||||||||||||||||  ||||| ||||||||| |||| |||||||| ||| || |||||||    
T  47222021 taatatttttttggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatc 47221951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 4030926 - 4030865
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||| |||  |||| || |||||||||||| |||||||||||||||    
T  4030926 tttgacaaaattacacaatttgtcttttaatttgattttaggtaaccctttcgttctttatc 4030865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 8869584 - 8869625
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  8869584 caaaattacacaattcgtcccttaacttaattttaggtaaca 8869625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 43161706 - 43161653
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 115  Q
    |||||||||||||||||||| |||||||||||| |||| || ||| ||||||||    
T  43161706 tttggcaaaattacacaatttgtcccttaacttaatttcagctaatactttcgt 43161653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 45746724 - 45746781
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||   ||||||||||| |||||||||||||||||||||| | ||||||    
T  45746724 ggcaaaattacatggttagtcccttacctttattttaggtaacactttcttcctttat 45746781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 10360399 - 10360463
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||| ||||||||||| || || |||  ||||||| ||||||||||||| ||||||||||||||    
T  10360399 tttttaggcaaaattactcattttgtcatttaacttaattttaggtaacaatttcgttctttatc 10360463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 44458100 - 44458040
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  44458100 ttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 44458040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 2933483 - 2933444
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagattt 181  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  2933483 caaagaaatttgattttctatgcttgtatgatgaaaattt 2933444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 42391295 - 42391354
Alignment:
Q  64 tggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  42391295 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 42391354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 42391614 - 42391567
Alignment:
Q  61 ttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  42391614 ttttggcaaaattacacttttagtcccttaacttgatttcaggtaaca 42391567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 45055317 - 45055380
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  45055317 ttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 45055380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 8522324 - 8522382
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  8522324 ggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatc 8522382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 10878975 - 10878921
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 122  Q
    ||||||||||||||||| ||||||||| ||||||| ||| | |||||| ||||||    
T  10878975 aaaattacacaattagtaccttaacttaattttagctaatattttcgtcctttat 10878921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 12423845 - 12423903
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  12423845 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 12423903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 34287831 - 34287773
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||   ||||||||||||||| |||| |||||||||||| || |||||||    
T  34287831 ggcaaaattacaattttagtcccttaacttaatttcaggtaacactttggtcctttatc 34287773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 38495228 - 38495170
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  38495228 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 38495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 41922282 - 41922340
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  41922282 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 41922340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 43575364 - 43575306
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  43575364 ggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatc 43575306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 45055636 - 45055578
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  45055636 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 45055578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 8522633 - 8522568
Alignment:
Q  58 attttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||| || ||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  8522633 atttttaggtaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 8522568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 8871543 - 8871502
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||| ||||||| |||||||||||| |||||||||||||    
T  8871543 caaaattccacaattcgtcccttaacttaattttaggtaaca 8871502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 28588311 - 28588360
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||||  ||||||| ||||||| |||| ||||||||    
T  28588311 ttttttggcaaaattacacttttagtcctttaacttaatttcaggtaaca 28588360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 32072263 - 32072202
Alignment:
Q  62 tttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||| |  |||| ||||||||||| ||||| ||||||| |||||| |||||||    
T  32072263 tttggcaaaattataatattaatcccttaacttaatttttggtaacaatttcgtcctttatc 32072202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 37452478 - 37452511
Alignment:
Q  90 aactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||| |||||||    
T  37452478 aactttattttaggtaacactttcgtcctttatc 37452511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 7149289 - 7149349
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  7149289 ttggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 7149349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 10543710 - 10543682
Alignment:
Q  80 ttagtcccttaactttattttaggtaaca 108  Q
    |||||||||||||||||||||||||||||    
T  10543710 ttagtcccttaactttattttaggtaaca 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 11337886 - 11337950
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||| ||||||| |||| | |||||| ||| || |||||||    
T  11337886 ttttttggcaaaattacacttttagtcctttaacttaatttcatgtaacaatttggtcctttatc 11337950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 19124826 - 19124874
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    ||||||||||||||||||  ||| ||||||||||| | |||||||||||    
T  19124826 tttttggcaaaattacacttttaatcccttaacttaagtttaggtaaca 19124874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 20121204 - 20121264
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| ||||  ||||||| ||| || |||||||    
T  20121204 ttggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatc 20121264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 20121525 - 20121461
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||| ||||||| |||| | |||||| ||| || |||||||    
T  20121525 ttttttggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatc 20121461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 23036642 - 23036690
Alignment:
Q  60 tttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||| ||||||||||||   ||||||||||||||| |||||||||||||    
T  23036642 ttttaggcaaaattacaattttagtcccttaacttaattttaggtaaca 23036690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 29099497 - 29099445
Alignment:
Q  56 taattttttggcaaaattacacaattagtcccttaactttattttaggtaaca 108  Q
    |||| ||| |||||||||||||  ||||||||||||||| |||| ||||||||    
T  29099497 taatatttaggcaaaattacacttttagtcccttaacttaatttcaggtaaca 29099445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 29226612 - 29226572
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattt 99  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  29226612 tttttaggcaaaattacacaattagtcctttaacttaattt 29226572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 31813728 - 31813788
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||| ||||||||||| |||| |||||||| ||| || |||||||    
T  31813728 ttggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 31813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 41857135 - 41857199
Alignment:
Q  59 ttttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||  ||||||| ||||||| |||| | |||||| ||| || |||||||    
T  41857135 ttttttggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatc 41857199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 41857456 - 41857396
Alignment:
Q  63 ttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||  ||||||||||||||| ||||  ||||||| ||| || |||||||    
T  41857456 ttggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatc 41857396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 45062374 - 45062318
Alignment:
Q  67 caaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  45062374 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 45062318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 8e-23; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 136904 - 136974
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  136904 taataattgttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 136974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 137259 - 137201
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||    
T  137259 ggcaaaattacataattagtccatttactttattttaggtaacactttcgtcctttatc 137201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 137130 - 137081
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  137130 caaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 8e-23; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 330185 - 330255
Alignment:
Q  53 taataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  330185 taataattgttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 330255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 330540 - 330482
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||    
T  330540 ggcaaaattacataattagtccatttactttattttaggtaacactttcgtcctttatc 330482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 330411 - 330362
Alignment:
Q  142 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 191  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  330411 caaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 330362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 12279 - 12223
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttta 121  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  12279 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtccttta 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 11940 - 11995
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttcttt 120  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  11940 ggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgttcttt 11995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 12942 - 12884
Alignment:
Q  65 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||    
T  12942 ggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttatc 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 1214 - 1159
Alignment:
Q  68 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    ||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||    
T  1214 aaaattacacaattagtcctttaatttaattttaggtaacactctcgttctttatc 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 8712 - 8644
Alignment:
Q  55 ataattttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatc 123  Q
    |||| ||||||||||||||||||  ||||||  ||||||| |||| |||||||| ||| || |||||||    
T  8712 ataactttttggcaaaattacacttttagtcttttaacttaatttcaggtaacagtttggtcctttatc 8644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University