View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1271_low_45 (Length: 465)
Name: NF1271_low_45
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1271_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 74 - 408
Target Start/End: Original strand, 36680449 - 36680783
Alignment:
| Q |
74 |
aaacactacttcaactcttatgacaatctggccaacatacatatgtaatttaatgttgacagttctcagaaaactggtatgaaattatatacactcttcc |
173 |
Q |
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| T |
36680449 |
aaacactacttcaactcttatgacaatctggccaacatacatatgtaatttaatgttgacagttctcagaaaactggtatgaaattatatacactcttcc |
36680548 |
T |
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| Q |
174 |
attatttatcagcacttcgatataacactatatcaaatatttatattttgaaccaatcttttcaaaagtaataatttaagcaagcaaaatattcatggtt |
273 |
Q |
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| T |
36680549 |
attatttatcagcacttcgatataacactatatcaaatatttatattttaaaccaatcttttcaaaagtaataatttaagcaagcaaaatattcatgttt |
36680648 |
T |
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| Q |
274 |
atgttctaagaaattgttttccgatgggtgcatgaaatgtaaacgaggtttggtagattataaaaacacatgagctggtaattggtttggtagtagtccg |
373 |
Q |
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| T |
36680649 |
atgttctaagaaattgttttccgatgggtgcatgaaatgtaaacgaggtttggtagattataaaaacacatttgctggtaattggtttggtagtagtccg |
36680748 |
T |
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| Q |
374 |
acacctactgacaactccaatgggcatgtcctatg |
408 |
Q |
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| T |
36680749 |
acacctactgacaactccaatgggcatgtcctatg |
36680783 |
T |
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