View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1271_low_68 (Length: 423)
Name: NF1271_low_68
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1271_low_68 |
 |  |
|
| [»] scaffold0264 (1 HSPs) |
 |  |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
| [»] scaffold0074 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 30 - 360
Target Start/End: Complemental strand, 22205058 - 22204731
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
22205058 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaacaactctcgcacccacctt |
22204959 |
T |
 |
| Q |
130 |
tccatcacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagg |
229 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22204958 |
tccatcacaacagctaggaagttcctcaatagcactattaagacaggttctgcaatcaccgggtgacaagtccggcgtgcactgagctaggcagtaaagg |
22204859 |
T |
 |
| Q |
230 |
gtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcg |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22204858 |
gtctgagattcagaaatctttgcttcttttgtggcaaatttcttg---ttgtcagcagtaagtggacctgctgcttcctctgcagttttattcatcgtcg |
22204762 |
T |
 |
| Q |
330 |
aaaacaataaaggcatgaagctttttgtgtt |
360 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |
|
|
| T |
22204761 |
aaaacaataaaggcatgaagctttctgtgtt |
22204731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 30 - 360
Target Start/End: Original strand, 20086105 - 20086435
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20086105 |
gaacaagctcatttggcgaaggagcattaatagacctataaaaaggatataattcatacctaacattacagctaggaaaaagaactctcccacccacctt |
20086204 |
T |
 |
| Q |
130 |
tccatcacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagg |
229 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
20086205 |
tccatcacaacagctaggaagtttctcaatagcactattgagacaggttctgcaatcaccgggtgacaagtccggcgtgcactgagctagacagtaaagg |
20086304 |
T |
 |
| Q |
230 |
gtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcg |
329 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
20086305 |
gtctgagattcagaaatccttgcttcttttgtggcaaacttcttgttgttgtcagtagtaagtggacctgctgcttcctctgcagttttatccatcgtcg |
20086404 |
T |
 |
| Q |
330 |
aaaacaataaaggcatgaagctttttgtgtt |
360 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |
|
|
| T |
20086405 |
aaaacaataaaggcatgaagctttctgtgtt |
20086435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 30 - 397
Target Start/End: Complemental strand, 24385270 - 24384904
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||| ||| |
|
|
| T |
24385270 |
gaacaagctcatttgatgaaggagcaataatagatttataaaaaggaaatagttcatacctaatgttacagctaggaaaaggaactctcc-accctgctt |
24385172 |
T |
 |
| Q |
130 |
tccatcacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagg |
229 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| |
|
|
| T |
24385171 |
tccatcacaacatagtggaagagattcaatagcactattgagacaggttctgcaatcattaggggacaagtctggcgtgcactgagctaaatagtaaagc |
24385072 |
T |
 |
| Q |
230 |
gtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcg |
329 |
Q |
| |
|
|||| | | | |||| ||| || |||||| ||| |||||||||||| ||||||||||||| || ||||||||||||||||| ||||||| |||| |
|
|
| T |
24385071 |
gtctaaaaatttgaaacagatgcatcacttgtggaaaacttcttgttgttgcaagcagtaagtggacctactgcttcctctgcagttatattcattgtcg |
24384972 |
T |
 |
| Q |
330 |
aaaacaataaaggcatgaagctttttgtgttagatacgttgcctacgttccacatgtaaagccaagga |
397 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
24384971 |
aaaataataaagccatgaagctttttgtgttagatatgttgcctgcgttccacatgtaaagcccagga |
24384904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 30 - 370
Target Start/End: Original strand, 20238018 - 20238358
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||| | | | |||||||||| ||| |
|
|
| T |
20238018 |
gaacaagctcatttagtgaaggagcattagtagatctataaaaaggatatagctcatacctaatattacaactaggatataaatttctcccaccctgctt |
20238117 |
T |
 |
| Q |
130 |
tccatcaca-acagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaag |
228 |
Q |
| |
|
||||||| | ||| | | |||| | |||||||| | ||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
20238118 |
tccatcatacacattt-gaaagtttcctaatagcacaaccgaggcaggttctgcaatcattgaacgacaagtctggcgtgcactgagctagacagtaaag |
20238216 |
T |
 |
| Q |
229 |
ggtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtc |
328 |
Q |
| |
|
|| |||||||||||||||| | |||| | |||||||| ||| ||| |||||| ||||||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
20238217 |
cgtttgagattcagaaatctgtttttctatcgtggcaaacttcgtgtccttgtcaccagtaagtggacccgctgctttctctgcagttttattcatcgtc |
20238316 |
T |
 |
| Q |
329 |
gaaaacaataaaggcatgaagctttttgtgttagatacgttg |
370 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20238317 |
gaaaacaatataggcatgaagctttttgtgttagatacgttg |
20238358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 30 - 370
Target Start/End: Original strand, 22132002 - 22132342
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||| | | | |||||||||| ||| |
|
|
| T |
22132002 |
gaacaagctcatttagtgaaggagcattagtagatctataaaaaggatatagctcatacctaatattacaactaggatataaatttctcccaccctgctt |
22132101 |
T |
 |
| Q |
130 |
tccatcaca-acagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaag |
228 |
Q |
| |
|
||||||| | ||| | | |||| | |||||||| | ||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
22132102 |
tccatcatacacattt-gaaagtttcctaatagcacaaccgaggcaggttctgcaatcattgaacgacaagtctggcgtgcactgagctagacagtaaag |
22132200 |
T |
 |
| Q |
229 |
ggtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtc |
328 |
Q |
| |
|
|| |||||||||||||||| | |||| | |||||||| ||| ||| |||||| ||||||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
22132201 |
cgtttgagattcagaaatctgtttttctatcgtggcaaacttcgtgtccttgtcaccagtaagtggacccgctgctttctctgcagttttattcatcgtc |
22132300 |
T |
 |
| Q |
329 |
gaaaacaataaaggcatgaagctttttgtgttagatacgttg |
370 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22132301 |
gaaaacaatataggcatgaagctttttgtgttagatacgttg |
22132342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 35 - 341
Target Start/End: Original strand, 20205430 - 20205736
Alignment:
| Q |
35 |
agctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctttccat |
134 |
Q |
| |
|
||||||||||||||| || || |||||||||||||||| ||||||| ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||| |
|
|
| T |
20205430 |
agctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaatctccctcccacctttccat |
20205529 |
T |
 |
| Q |
135 |
cacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagggtctg |
234 |
Q |
| |
|
|||||| | | || | ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
20205530 |
cacaactctttgaaactttctcaatagcactactgagacaggttctgcaatcattaggcgacaaatccggcgtgcactgagctagacagtaaagggtctg |
20205629 |
T |
 |
| Q |
235 |
agattcagaaatctt-tgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcgaaaa |
333 |
Q |
| |
|
| ||| | |||||| ||||||||| || ||||| |||| ||| |||||| || |||||||| ||||||||| ||| ||||| |||||| || | ||| |
|
|
| T |
20205630 |
attttccg-aatcttgtgcttctttggttgcaaacttctcgtttttgtcaccaataagtggacttgctgcttcatctacagttcgattcatggttgtaaa |
20205728 |
T |
 |
| Q |
334 |
caataaag |
341 |
Q |
| |
|
|||||||| |
|
|
| T |
20205729 |
caataaag |
20205736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 35 - 341
Target Start/End: Original strand, 22099453 - 22099759
Alignment:
| Q |
35 |
agctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctttccat |
134 |
Q |
| |
|
||||||||||||||| || || |||||||||||||||| ||||||| ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||| |
|
|
| T |
22099453 |
agctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaatctccctcccacctttccat |
22099552 |
T |
 |
| Q |
135 |
cacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagggtctg |
234 |
Q |
| |
|
|||||| | | || | ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22099553 |
cacaactctttgaaactttctcaatagcactactgagacaggttctgcaatcattaggcgacaaatccggcgtgcactgagctagacagtaaagggtctg |
22099652 |
T |
 |
| Q |
235 |
agattcagaaatctt-tgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcgaaaa |
333 |
Q |
| |
|
| ||| | |||||| ||||||||| || ||||| |||| ||| |||||| || |||||||| ||||||||| ||| ||||| |||||| || | ||| |
|
|
| T |
22099653 |
attttccg-aatcttgtgcttctttggttgcaaacttctcgtttttgtcaccaataagtggacttgctgcttcatctacagttcgattcatggttgtaaa |
22099751 |
T |
 |
| Q |
334 |
caataaag |
341 |
Q |
| |
|
|||||||| |
|
|
| T |
22099752 |
caataaag |
22099759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 33 - 360
Target Start/End: Original strand, 21971992 - 21972316
Alignment:
| Q |
33 |
caagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctttcc |
132 |
Q |
| |
|
||||||||||||| ||| || ||| | ||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
21971992 |
caagctcatttggggaaagaacataagtagacctataaaatggatataattcatacctaacattacagctaggataaagaaatctcccaccaacctttcc |
21972091 |
T |
 |
| Q |
133 |
atcacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagggtc |
232 |
Q |
| |
|
| |||| | | |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||||| |
|
|
| T |
21972092 |
aacacagctttgtgaaagtgtctcaatagcactagtgagacaggttctgcaatcattaggcgacaaatccagcgtgcactgagctagactgtaaagggtc |
21972191 |
T |
 |
| Q |
233 |
tgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcgaaa |
332 |
Q |
| |
|
||| ||| |||| |||||||||||| ||||| |||||| |||||| || |||| ||| ||||||||| ||||||||| |||||| || |||| |
|
|
| T |
21972192 |
tgattttccgaaactcgtgcttcttttgttgcaaa---cttgttcttgtcaccactaagcggacttgctgcttcgtctgcagttcgattcatggttgaaa |
21972288 |
T |
 |
| Q |
333 |
acaataaaggcatgaagctttttgtgtt |
360 |
Q |
| |
|
||||||||| || ||||||||| ||||| |
|
|
| T |
21972289 |
acaataaagacacgaagcttttcgtgtt |
21972316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 141; Significance: 9e-74; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 30 - 370
Target Start/End: Original strand, 16054 - 16394
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
16054 |
gaacaagctcatttggcgaaggagcattaatagacctataaaaaggatatagttcatacctaacattacagctaggcaaaagaaatctcccacccacctt |
16153 |
T |
 |
| Q |
130 |
tccatcacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaagg |
229 |
Q |
| |
|
||||| || ||| |||||| | ||||||||| ||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||||| ||| |
|
|
| T |
16154 |
tccataaccacacagaggaagaagatcaatagcagtatagagacaggttctgcaattgttaggagacaagtctggcgtgcactgagctagacagtatagg |
16253 |
T |
 |
| Q |
230 |
gtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtcg |
329 |
Q |
| |
|
|||||| || |||| |||||||||||| ||||| ||||| || |||| || |||||||| ||||||||| |||||||||| | | || | |
|
|
| T |
16254 |
gtctgatttttcgaaactcgtgcttcttttgttgcaaacttcttttttatgtctccaataagtggacgtgctgcttcatctgcagtttcgtaccaggttg |
16353 |
T |
 |
| Q |
330 |
aaaacaataaaggcatgaagctttttgtgttagatacgttg |
370 |
Q |
| |
|
||||||||||||||||||||||||| ||||| || |||||| |
|
|
| T |
16354 |
aaaacaataaaggcatgaagcttttcgtgtttgagacgttg |
16394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 5411 - 5203
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcatta---atagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccac |
126 |
Q |
| |
|
||||||||||||||||||||| || | || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
5411 |
gaacaagctcatttggtgaagaagtagtattgatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaacaactctcccaccctc |
5312 |
T |
 |
| Q |
127 |
ctttccatcacaacagctaggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaa |
226 |
Q |
| |
|
||||||||||||| ||||||| |||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
5311 |
ctttccatcacaaaccataggaagatattcaatagctctatggagacaggttctgcaattgttaggggacaagtccggcgtgcactgttctagacagtac |
5212 |
T |
 |
| Q |
227 |
agggtctga |
235 |
Q |
| |
|
||||||||| |
|
|
| T |
5211 |
agggtctga |
5203 |
T |
 |
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Target: scaffold0074 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 30 - 370
Target Start/End: Complemental strand, 47884 - 47547
Alignment:
| Q |
30 |
gaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctt |
129 |
Q |
| |
|
||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
47884 |
gaacaagctcatttggtgaagta---ttgatagacctataaaaaggatatagttcatacctaacattacagctaggaaaaaaaaccatcccaccctgctt |
47788 |
T |
 |
| Q |
130 |
tccatcacaacagct-aggaagtacctcaatagcactattgagacaggttctgcaatcattaggggacaaatccggcgtgcactgagctaggcagtaaag |
228 |
Q |
| |
|
||||||| || |||| || ||| | ||||||||| ||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
47787 |
tccatca-aaaagctgagcaagaaaatcaatagcagtatagagacaggttctgcaattgttaggagacaagtctggcgtgcactgagctagacagtaaag |
47689 |
T |
 |
| Q |
229 |
ggtctgagattcagaaatctttgcttcttttgtggcaaatttcttgttgttgtcagcagtaagtggagctgctgcttcctctgcagttttattcatcgtc |
328 |
Q |
| |
|
|||||| || |||| |||||||||||| ||||| ||||| || | || || |||||||| ||||||||| |||||||||| | | || |
|
|
| T |
47688 |
ggtctgttttttcgaaactcgtgcttcttttgttgcaaacttcttttttatatctccaataagtggacgtgctgcttcatctgcagtttcgtacccggtt |
47589 |
T |
 |
| Q |
329 |
gaaaacaataaaggcatgaagctttttgtgttagatacgttg |
370 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| || |||||| |
|
|
| T |
47588 |
gaaaacaataaaggcatgaagcttttcgtgtttgagacgttg |
47547 |
T |
 |
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Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 9674592 - 9674666
Alignment:
| Q |
67 |
ataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctttccatcacaaca |
141 |
Q |
| |
|
||||||||| |||| |||||| |||| ||||||||||||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
9674592 |
ataaaaagggtataattcatatctaacattacagctaggaaacaaaactctcccaccttgctttccatcacaaca |
9674666 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 47635283 - 47635209
Alignment:
| Q |
67 |
ataaaaaggatatagttcatacctaatattacagctaggaaaaagaactctcccacccacctttccatcacaaca |
141 |
Q |
| |
|
||||||||| |||| |||||| |||| ||||||||||||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
47635283 |
ataaaaagggtataattcatatctaacattacagctaggaaacaaaactctcccaccttgctttccatcacaaca |
47635209 |
T |
 |
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