View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1272-Insertion-6 (Length: 385)

Name: NF1272-Insertion-6
Description: NF1272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1272-Insertion-6
NF1272-Insertion-6
[»] chr3 (72 HSPs)
chr3 (5-282)||(17579132-17579410)
chr3 (141-281)||(40133447-40133587)
chr3 (141-279)||(49258262-49258400)
chr3 (141-281)||(10190740-10190880)
chr3 (141-279)||(21363002-21363140)
chr3 (141-281)||(8456148-8456288)
chr3 (141-281)||(10083817-10083957)
chr3 (141-281)||(15566498-15566637)
chr3 (141-281)||(25289713-25289852)
chr3 (141-279)||(35492970-35493108)
chr3 (141-281)||(8097277-8097417)
chr3 (143-279)||(32151485-32151621)
chr3 (141-281)||(46576407-46576547)
chr3 (141-281)||(53424175-53424314)
chr3 (141-279)||(18176887-18177025)
chr3 (143-281)||(45272414-45272552)
chr3 (141-278)||(25379820-25379957)
chr3 (143-279)||(24407322-24407458)
chr3 (141-281)||(26174172-26174312)
chr3 (141-281)||(52455647-52455787)
chr3 (141-281)||(53233909-53234048)
chr3 (141-279)||(52821636-52821773)
chr3 (141-281)||(30807151-30807291)
chr3 (142-279)||(33398468-33398605)
chr3 (142-279)||(39041852-39041989)
chr3 (142-281)||(8958033-8958173)
chr3 (141-281)||(45529753-45529892)
chr3 (141-281)||(48977447-48977587)
chr3 (146-279)||(31537838-31537971)
chr3 (141-281)||(30257683-30257823)
chr3 (141-281)||(40940884-40941024)
chr3 (142-279)||(34492575-34492712)
chr3 (141-281)||(2511295-2511435)
chr3 (141-281)||(25344056-25344195)
chr3 (141-279)||(1692893-1693030)
chr3 (176-281)||(24165713-24165817)
chr3 (182-279)||(54475781-54475878)
chr3 (191-278)||(48104986-48105073)
chr3 (144-279)||(53288713-53288847)
chr3 (136-281)||(11390656-11390801)
chr3 (212-281)||(53848432-53848501)
chr3 (142-281)||(51532849-51532988)
chr3 (141-235)||(26108351-26108445)
chr3 (141-281)||(1178231-1178369)
chr3 (141-250)||(7470245-7470353)
chr3 (145-248)||(1242036-1242139)
chr3 (204-271)||(55371302-55371369)
chr3 (232-281)||(3747731-3747780)
chr3 (141-279)||(48972714-48972849)
chr3 (142-279)||(6041670-6041809)
chr3 (190-281)||(33698704-33698795)
chr3 (208-279)||(50731237-50731308)
chr3 (208-279)||(50781546-50781617)
chr3 (217-279)||(4048085-4048147)
chr3 (210-279)||(7485531-7485599)
chr3 (205-274)||(26158934-26159003)
chr3 (135-177)||(8075100-8075142)
chr3 (340-378)||(17579049-17579087)
chr3 (142-279)||(4462693-4462829)
chr3 (197-281)||(7195922-7196006)
chr3 (227-279)||(14997755-14997807)
chr3 (141-257)||(29915292-29915407)
chr3 (141-257)||(29964445-29964560)
chr3 (219-279)||(51390133-51390193)
chr3 (212-271)||(4252404-4252463)
chr3 (141-180)||(25017574-25017613)
chr3 (226-281)||(55287929-55287984)
chr3 (213-279)||(25017620-25017685)
chr3 (190-243)||(31766799-31766852)
chr3 (200-281)||(32094755-32094836)
chr3 (135-175)||(36720442-36720482)
chr3 (229-281)||(39890604-39890656)
[»] chr5 (59 HSPs)
chr5 (141-281)||(7085624-7085764)
chr5 (141-281)||(27498729-27498869)
chr5 (141-281)||(8484659-8484799)
chr5 (141-281)||(15641104-15641243)
chr5 (141-281)||(18207266-18207406)
chr5 (141-281)||(21236360-21236500)
chr5 (141-281)||(30485887-30486027)
chr5 (141-281)||(32059438-32059578)
chr5 (141-279)||(34310201-34310339)
chr5 (149-281)||(19456209-19456340)
chr5 (141-281)||(38684267-38684406)
chr5 (141-279)||(11926501-11926640)
chr5 (151-281)||(35425082-35425212)
chr5 (142-281)||(31287944-31288083)
chr5 (170-279)||(13659245-13659354)
chr5 (142-281)||(33709501-33709638)
chr5 (141-281)||(37495106-37495253)
chr5 (141-253)||(15971148-15971260)
chr5 (142-281)||(4603837-4603976)
chr5 (141-279)||(6014280-6014418)
chr5 (201-279)||(22693054-22693132)
chr5 (141-274)||(11464913-11465045)
chr5 (141-281)||(10869563-10869703)
chr5 (210-281)||(38630977-38631048)
chr5 (191-281)||(22392797-22392887)
chr5 (161-279)||(23270522-23270640)
chr5 (141-279)||(19145412-19145549)
chr5 (141-271)||(13038463-13038592)
chr5 (141-271)||(13108458-13108587)
chr5 (191-281)||(41351102-41351191)
chr5 (141-281)||(12398446-12398586)
chr5 (160-279)||(9659311-9659430)
chr5 (161-279)||(27487554-27487673)
chr5 (168-279)||(34049897-34050008)
chr5 (135-281)||(26009262-26009408)
chr5 (141-270)||(42193544-42193671)
chr5 (141-281)||(41568867-41569006)
chr5 (141-271)||(36954877-36955007)
chr5 (138-281)||(12317153-12317291)
chr5 (232-281)||(10631287-10631336)
chr5 (136-279)||(10399827-10399971)
chr5 (147-279)||(25750613-25750741)
chr5 (147-279)||(5049202-5049333)
chr5 (213-268)||(5067392-5067447)
chr5 (141-279)||(24158166-24158304)
chr5 (218-281)||(33737878-33737940)
chr5 (226-279)||(28614486-28614539)
chr5 (205-281)||(37972906-37972982)
chr5 (205-280)||(21377248-21377323)
chr5 (214-281)||(25548532-25548599)
chr5 (141-216)||(25586991-25587066)
chr5 (231-281)||(3599996-3600046)
chr5 (233-279)||(7151454-7151500)
chr5 (141-235)||(15931118-15931211)
chr5 (318-355)||(39787241-39787278)
chr5 (211-279)||(930486-930554)
chr5 (243-279)||(9100302-9100338)
chr5 (141-177)||(17028237-17028273)
chr5 (215-279)||(36895558-36895622)
[»] chr8 (53 HSPs)
chr8 (141-281)||(4718708-4718848)
chr8 (141-281)||(34237653-34237793)
chr8 (141-281)||(3734621-3734761)
chr8 (141-281)||(8765524-8765664)
chr8 (141-281)||(39349319-39349459)
chr8 (141-279)||(21603293-21603431)
chr8 (140-281)||(2618248-2618389)
chr8 (141-281)||(32879342-32879482)
chr8 (141-279)||(6953008-6953145)
chr8 (141-278)||(15259407-15259544)
chr8 (141-278)||(28193537-28193674)
chr8 (141-281)||(4698721-4698861)
chr8 (143-279)||(42643118-42643254)
chr8 (143-281)||(20305973-20306111)
chr8 (143-281)||(21092606-21092744)
chr8 (141-279)||(25248412-25248547)
chr8 (141-281)||(19471672-19471813)
chr8 (141-281)||(19542596-19542737)
chr8 (141-281)||(19589959-19590100)
chr8 (141-281)||(42328067-42328207)
chr8 (190-281)||(2639409-2639500)
chr8 (141-279)||(264400-264537)
chr8 (141-279)||(651384-651521)
chr8 (141-279)||(837119-837256)
chr8 (141-279)||(20469980-20470117)
chr8 (141-281)||(14633017-14633157)
chr8 (141-281)||(34610685-34610825)
chr8 (143-270)||(28088351-28088478)
chr8 (136-281)||(1219407-1219552)
chr8 (141-281)||(24018445-24018586)
chr8 (141-281)||(18532170-18532301)
chr8 (141-279)||(10292118-10292255)
chr8 (190-279)||(18128625-18128714)
chr8 (142-281)||(28964097-28964235)
chr8 (141-238)||(24999297-24999394)
chr8 (142-279)||(3403502-3403639)
chr8 (141-281)||(27746333-27746473)
chr8 (141-271)||(1372409-1372539)
chr8 (141-279)||(2166762-2166897)
chr8 (212-278)||(7557952-7558018)
chr8 (141-281)||(33746945-33747085)
chr8 (146-281)||(9047277-9047411)
chr8 (233-279)||(9713609-9713655)
chr8 (135-279)||(28908880-28909025)
chr8 (200-274)||(43817754-43817828)
chr8 (136-241)||(21667608-21667713)
chr8 (231-281)||(5740381-5740431)
chr8 (151-281)||(36848748-36848877)
chr8 (141-177)||(11819843-11819879)
chr8 (217-281)||(16990722-16990786)
chr8 (216-272)||(26168856-26168912)
chr8 (141-177)||(33727846-33727882)
chr8 (141-177)||(44780087-44780123)
[»] chr7 (60 HSPs)
chr7 (141-281)||(22119951-22120091)
chr7 (141-281)||(40542908-40543048)
chr7 (141-281)||(2751334-2751474)
chr7 (141-281)||(21835214-21835354)
chr7 (141-279)||(7275340-7275478)
chr7 (141-281)||(29861733-29861873)
chr7 (143-281)||(16374059-16374197)
chr7 (142-279)||(17196950-17197087)
chr7 (141-281)||(654703-654842)
chr7 (141-281)||(7175860-7176000)
chr7 (141-281)||(22703549-22703689)
chr7 (141-281)||(11997912-11998052)
chr7 (141-279)||(18044170-18044308)
chr7 (135-281)||(27312209-27312355)
chr7 (149-281)||(23092167-23092299)
chr7 (143-281)||(2344364-2344502)
chr7 (161-279)||(3851840-3851958)
chr7 (141-282)||(21217830-21217971)
chr7 (141-281)||(23012506-23012646)
chr7 (141-281)||(28089879-28090022)
chr7 (141-281)||(2103118-2103256)
chr7 (141-281)||(10091251-10091390)
chr7 (141-279)||(27009422-27009561)
chr7 (141-279)||(41907514-41907651)
chr7 (141-278)||(19421294-19421431)
chr7 (142-279)||(22643342-22643479)
chr7 (157-281)||(31197669-31197793)
chr7 (138-278)||(32849651-32849791)
chr7 (161-281)||(42913511-42913631)
chr7 (147-278)||(9683895-9684026)
chr7 (142-281)||(31273978-31274116)
chr7 (142-281)||(43785297-43785436)
chr7 (141-279)||(28950934-28951072)
chr7 (141-281)||(17212116-17212255)
chr7 (156-256)||(21373788-21373888)
chr7 (205-281)||(21574100-21574176)
chr7 (200-279)||(31712902-31712981)
chr7 (141-279)||(39145652-39145790)
chr7 (161-279)||(36772303-36772421)
chr7 (141-278)||(22638355-22638488)
chr7 (141-279)||(28647032-28647170)
chr7 (152-279)||(33137825-33137951)
chr7 (197-279)||(25333522-25333603)
chr7 (141-279)||(27704065-27704202)
chr7 (141-281)||(23330737-23330877)
chr7 (142-281)||(9717985-9718124)
chr7 (141-215)||(14199730-14199804)
chr7 (142-274)||(1766149-1766280)
chr7 (141-206)||(42814927-42814992)
chr7 (212-271)||(8943409-8943468)
chr7 (200-279)||(25102809-25102887)
chr7 (141-177)||(33181183-33181219)
chr7 (141-177)||(48983706-48983742)
chr7 (234-281)||(22299958-22300005)
chr7 (216-279)||(22696459-22696522)
chr7 (222-277)||(30345511-30345566)
chr7 (236-281)||(13332432-13332477)
chr7 (135-188)||(36173092-36173144)
chr7 (327-355)||(25471962-25471990)
chr7 (200-248)||(40332195-40332243)
[»] chr4 (73 HSPs)
chr4 (141-281)||(27528793-27528933)
chr4 (141-281)||(34844756-34844896)
chr4 (141-281)||(40058850-40058990)
chr4 (141-278)||(52983678-52983815)
chr4 (141-281)||(32986256-32986396)
chr4 (142-281)||(44343574-44343713)
chr4 (141-280)||(21387486-21387623)
chr4 (141-281)||(32990494-32990634)
chr4 (141-279)||(34723858-34723996)
chr4 (141-281)||(5609200-5609340)
chr4 (141-281)||(36131508-36131648)
chr4 (141-281)||(54127340-54127480)
chr4 (141-279)||(33696279-33696417)
chr4 (141-270)||(9517650-9517779)
chr4 (141-281)||(45787702-45787842)
chr4 (141-279)||(20566409-20566547)
chr4 (141-279)||(49287917-49288054)
chr4 (141-277)||(20077986-20078122)
chr4 (162-281)||(19660530-19660649)
chr4 (148-281)||(46714459-46714592)
chr4 (141-281)||(18875515-18875654)
chr4 (161-281)||(27574397-27574517)
chr4 (147-278)||(13550273-13550404)
chr4 (141-279)||(25852273-25852412)
chr4 (151-281)||(55961752-55961881)
chr4 (141-279)||(35229227-35229365)
chr4 (134-281)||(4911974-4912125)
chr4 (141-279)||(51535672-51535818)
chr4 (161-279)||(51595101-51595219)
chr4 (141-274)||(32942429-32942562)
chr4 (141-229)||(35674791-35674879)
chr4 (142-279)||(34835589-34835726)
chr4 (146-279)||(12824464-12824597)
chr4 (203-279)||(4064981-4065057)
chr4 (141-229)||(33992685-33992773)
chr4 (142-281)||(13584252-13584391)
chr4 (216-279)||(23639758-23639821)
chr4 (216-279)||(23645416-23645479)
chr4 (141-279)||(12500059-12500196)
chr4 (217-279)||(52494623-52494685)
chr4 (141-281)||(7391963-7392101)
chr4 (203-279)||(9978509-9978585)
chr4 (161-281)||(22488026-22488146)
chr4 (141-281)||(30879164-30879303)
chr4 (143-279)||(13771482-13771619)
chr4 (141-243)||(38740909-38741011)
chr4 (211-281)||(43719085-43719155)
chr4 (213-279)||(55158343-55158409)
chr4 (141-258)||(13873316-13873433)
chr4 (218-279)||(17637852-17637912)
chr4 (141-278)||(25969504-25969638)
chr4 (226-279)||(33289198-33289251)
chr4 (146-278)||(20527035-20527166)
chr4 (218-281)||(23131434-23131497)
chr4 (212-275)||(46759107-46759170)
chr4 (141-279)||(1985895-1986031)
chr4 (191-281)||(4585711-4585799)
chr4 (227-281)||(43352337-43352391)
chr4 (209-278)||(9646217-9646286)
chr4 (141-177)||(9693471-9693507)
chr4 (205-281)||(13017836-13017911)
chr4 (161-229)||(29875825-29875893)
chr4 (142-177)||(8030177-8030212)
chr4 (200-243)||(22625097-22625140)
chr4 (229-279)||(13781133-13781183)
chr4 (226-279)||(3391446-3391499)
chr4 (216-277)||(21175658-21175719)
chr4 (318-355)||(23985786-23985823)
chr4 (141-281)||(28791174-28791313)
chr4 (218-279)||(37302623-37302684)
chr4 (197-278)||(42508382-42508463)
chr4 (135-188)||(43719156-43719209)
chr4 (318-355)||(52545283-52545320)
[»] chr6 (35 HSPs)
chr6 (141-279)||(654146-654284)
chr6 (141-281)||(15360096-15360236)
chr6 (141-281)||(34147405-34147545)
chr6 (141-281)||(34160021-34160161)
chr6 (141-279)||(28672126-28672264)
chr6 (141-281)||(3222634-3222773)
chr6 (142-281)||(21148509-21148647)
chr6 (141-278)||(9239034-9239171)
chr6 (141-279)||(11448930-11449068)
chr6 (141-281)||(9843997-9844137)
chr6 (141-279)||(5360071-5360209)
chr6 (141-279)||(9690638-9690776)
chr6 (141-281)||(12390484-12390621)
chr6 (141-281)||(1344994-1345134)
chr6 (141-281)||(21982319-21982458)
chr6 (146-281)||(17081052-17081187)
chr6 (141-281)||(11007224-11007364)
chr6 (144-279)||(11840963-11841097)
chr6 (200-281)||(14213000-14213081)
chr6 (141-279)||(9208311-9208449)
chr6 (146-279)||(33499539-33499672)
chr6 (141-277)||(17149458-17149594)
chr6 (188-281)||(17706317-17706410)
chr6 (201-270)||(33718478-33718547)
chr6 (143-243)||(28968078-28968178)
chr6 (141-277)||(10377774-10377911)
chr6 (141-211)||(12591696-12591766)
chr6 (201-279)||(14504082-14504160)
chr6 (141-177)||(20213108-20213144)
chr6 (141-177)||(22107131-22107167)
chr6 (200-281)||(21903617-21903699)
chr6 (146-240)||(31039084-31039177)
chr6 (318-355)||(33866111-33866148)
chr6 (318-355)||(33869258-33869295)
chr6 (217-281)||(4391489-4391553)
[»] scaffold0576 (1 HSPs)
scaffold0576 (141-281)||(5080-5220)
[»] chr2 (62 HSPs)
chr2 (141-281)||(44946051-44946191)
chr2 (141-281)||(15038018-15038158)
chr2 (141-281)||(35171859-35171999)
chr2 (141-281)||(36242310-36242450)
chr2 (141-279)||(11941210-11941348)
chr2 (161-281)||(28668952-28669072)
chr2 (141-281)||(33827571-33827711)
chr2 (135-281)||(24196057-24196201)
chr2 (141-281)||(41314051-41314190)
chr2 (141-279)||(30466830-30466968)
chr2 (141-281)||(2140484-2140621)
chr2 (141-281)||(5394076-5394216)
chr2 (142-279)||(19849893-19850029)
chr2 (141-257)||(44976175-44976292)
chr2 (143-279)||(41329904-41330039)
chr2 (143-281)||(3943801-3943939)
chr2 (141-281)||(8258956-8259096)
chr2 (162-281)||(34516412-34516530)
chr2 (157-279)||(27269344-27269466)
chr2 (141-281)||(19054084-19054225)
chr2 (141-281)||(43374328-43374463)
chr2 (161-279)||(714125-714243)
chr2 (141-279)||(25293225-25293356)
chr2 (141-279)||(36390569-36390706)
chr2 (141-279)||(17324825-17324961)
chr2 (141-281)||(1191572-1191712)
chr2 (143-275)||(5608038-5608170)
chr2 (141-279)||(10581995-10582128)
chr2 (205-281)||(14486948-14487024)
chr2 (142-279)||(13266550-13266686)
chr2 (212-281)||(18692090-18692159)
chr2 (202-279)||(44929846-44929923)
chr2 (191-279)||(31778140-31778228)
chr2 (200-272)||(45132405-45132477)
chr2 (141-281)||(4567427-4567575)
chr2 (200-279)||(6714295-6714374)
chr2 (213-280)||(18976454-18976521)
chr2 (201-279)||(4852649-4852726)
chr2 (142-272)||(45271444-45271574)
chr2 (141-281)||(27290647-27290773)
chr2 (205-281)||(28194136-28194212)
chr2 (175-270)||(4769259-4769354)
chr2 (200-279)||(44610157-44610236)
chr2 (215-281)||(39957891-39957957)
chr2 (216-281)||(8192350-8192415)
chr2 (214-279)||(13089012-13089077)
chr2 (200-279)||(9400961-9401040)
chr2 (225-279)||(12360296-12360350)
chr2 (232-281)||(1501462-1501510)
chr2 (141-250)||(19525429-19525534)
chr2 (8-68)||(16381787-16381847)
chr2 (242-281)||(11147227-11147266)
chr2 (224-279)||(19174904-19174959)
chr2 (141-279)||(19605846-19605983)
chr2 (200-279)||(29361667-29361745)
chr2 (134-185)||(32845143-32845194)
chr2 (141-211)||(19517001-19517071)
chr2 (190-279)||(13599325-13599413)
chr2 (233-281)||(1845047-1845095)
chr2 (141-177)||(21195649-21195685)
chr2 (141-177)||(39765000-39765036)
chr2 (142-210)||(40997419-40997487)
[»] chr1 (63 HSPs)
chr1 (141-281)||(4621235-4621375)
chr1 (141-279)||(24122082-24122220)
chr1 (141-278)||(17935828-17935965)
chr1 (141-281)||(7766725-7766865)
chr1 (141-281)||(15059400-15059540)
chr1 (141-279)||(24674452-24674590)
chr1 (141-277)||(8077706-8077841)
chr1 (141-279)||(7197247-7197384)
chr1 (142-275)||(1378958-1379090)
chr1 (141-281)||(23734175-23734316)
chr1 (141-281)||(23741367-23741508)
chr1 (141-281)||(7578468-7578608)
chr1 (141-281)||(8254750-8254890)
chr1 (141-279)||(9500355-9500493)
chr1 (141-281)||(30677235-30677375)
chr1 (141-281)||(46607869-46608009)
chr1 (141-278)||(34778401-34778535)
chr1 (141-279)||(45859043-45859181)
chr1 (141-274)||(18646912-18647045)
chr1 (143-271)||(8779744-8779872)
chr1 (141-281)||(33905508-33905648)
chr1 (141-281)||(27454862-27455004)
chr1 (161-279)||(45331621-45331740)
chr1 (141-279)||(36155888-36156026)
chr1 (141-281)||(32729604-32729743)
chr1 (191-281)||(22909980-22910070)
chr1 (146-279)||(18533724-18533857)
chr1 (141-271)||(40145889-40146024)
chr1 (141-250)||(168260-168369)
chr1 (200-281)||(48699877-48699958)
chr1 (142-250)||(7946904-7947011)
chr1 (191-279)||(26513148-26513235)
chr1 (142-274)||(32930809-32930941)
chr1 (200-281)||(12876937-12877015)
chr1 (141-274)||(21726788-21726921)
chr1 (141-281)||(2272403-2272543)
chr1 (200-279)||(50202664-50202742)
chr1 (200-278)||(37351454-37351531)
chr1 (233-281)||(14603947-14603995)
chr1 (209-281)||(27159212-27159284)
chr1 (191-250)||(2537802-2537861)
chr1 (176-279)||(40802069-40802171)
chr1 (141-279)||(1486477-1486617)
chr1 (182-279)||(1818809-1818905)
chr1 (210-279)||(23041650-23041719)
chr1 (203-279)||(6776201-6776277)
chr1 (143-279)||(26820248-26820384)
chr1 (232-279)||(5315481-5315528)
chr1 (212-279)||(35138118-35138185)
chr1 (141-250)||(16899562-16899671)
chr1 (141-177)||(6122861-6122897)
chr1 (135-240)||(23232300-23232409)
chr1 (213-279)||(27542504-27542570)
chr1 (318-355)||(902089-902126)
chr1 (318-355)||(3282813-3282850)
chr1 (318-355)||(3284514-3284551)
chr1 (318-355)||(9312041-9312078)
chr1 (318-355)||(37664737-37664774)
chr1 (318-355)||(37674459-37674496)
chr1 (318-355)||(37702198-37702235)
chr1 (141-240)||(25237028-25237127)
chr1 (223-279)||(37349663-37349719)
chr1 (141-177)||(44961832-44961868)
[»] scaffold0070 (1 HSPs)
scaffold0070 (141-281)||(40384-40523)
[»] scaffold0102 (1 HSPs)
scaffold0102 (142-281)||(39152-39291)
[»] scaffold0019 (1 HSPs)
scaffold0019 (141-281)||(161868-162008)
[»] scaffold0217 (1 HSPs)
scaffold0217 (141-279)||(7309-7447)
[»] scaffold0026 (1 HSPs)
scaffold0026 (141-279)||(97366-97504)
[»] scaffold0366 (2 HSPs)
scaffold0366 (141-281)||(9298-9437)
scaffold0366 (141-281)||(11999-12138)
[»] scaffold0051 (1 HSPs)
scaffold0051 (141-281)||(52869-53009)
[»] scaffold0623 (1 HSPs)
scaffold0623 (141-279)||(1057-1194)
[»] scaffold0328 (2 HSPs)
scaffold0328 (141-279)||(13047-13182)
scaffold0328 (141-270)||(15050-15178)
[»] scaffold0016 (1 HSPs)
scaffold0016 (141-281)||(32347-32486)
[»] scaffold1175 (1 HSPs)
scaffold1175 (170-279)||(2426-2535)
[»] scaffold0068 (1 HSPs)
scaffold0068 (141-281)||(41643-41782)
[»] scaffold0049 (1 HSPs)
scaffold0049 (191-279)||(66863-66951)
[»] scaffold0459 (1 HSPs)
scaffold0459 (141-281)||(10693-10831)
[»] scaffold0717 (1 HSPs)
scaffold0717 (141-236)||(1-96)
[»] scaffold0157 (1 HSPs)
scaffold0157 (141-279)||(20281-20418)
[»] scaffold0199 (1 HSPs)
scaffold0199 (217-279)||(8451-8513)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-78)||(17442-17512)
[»] scaffold0028 (1 HSPs)
scaffold0028 (215-278)||(27903-27966)
[»] scaffold0020 (1 HSPs)
scaffold0020 (227-279)||(123066-123117)
[»] scaffold0300 (1 HSPs)
scaffold0300 (141-177)||(4407-4443)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 282
Target Start/End: Complemental strand, 17579410 - 17579132
Alignment:
Q  5 acactatatggaatcattcctcagatttgcttcttgaaaggaatttctgtatttccaaaggtaaactacggatatgtagctaaacaagatttttattaca 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17579410 acactttatggaatcattcctcagatttgcttcttgaaaggaatttctgtatttccaaaggtaaactacggataagtagctaaacaagttttttattaca 17579311  T
Q  105 agatgaatagtcaactatagttagttgatagtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgacttta 204  Q
    ||||||||| |||||||||||||||||||||| || |||| |||| |||||||||| ||||||||||||||||||| |||||||  |||||||  |||||    
T  17579310 agatgaataatcaactatagttagttgatagtctcaggtttgatttcctctagtgttaattttggtgggctaagtccatacagagcttgctttagcttta 17579211  T
Q  205 aacggggccc-ccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttcag 282  Q
    |||||| ||| |||||||| ||||||||||||||||||||| ||||| |||||| |||||||| ||| |||||||||||    
T  17579210 aacgggaccctccgcaagtgggcggtgagattggtcccctcagattagtcgatttttggatcgaatatcgagttttcag 17579132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 40133587 - 40133447
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  40133587 ggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40133488  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  40133487 cctcgaattagtcgattcttggatcggataccgagttttca 40133447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 49258400 - 49258262
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||| ||||| ||||||| |||||||||    
T  49258400 ggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcc 49258301  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  49258300 cctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 10190880 - 10190740
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| | ||||| |||||||||    
T  10190880 ggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcc 10190781  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  10190780 cctcggattagtcgattcttggatcggataccgagttttca 10190740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 21363002 - 21363140
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||| ||||||||| |||||||  ||||| || |||||||||| |||||||||||| ||||||| ||||||| |    
T  21363002 ggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggttc 21363101  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21363102 cctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 8456288 - 8456148
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||| ||| |||||||||    
T  8456288 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcagtgggattggtcc 8456189  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  8456188 cctcggattagtcgattcttgaatcggataccgagttttca 8456148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 10083957 - 10083817
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||| ||||| | ||||| |||||||||    
T  10083957 ggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacggtgggattggtcc 10083858  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  10083857 cctcggattagtcgattcttggatcggataccgagttttca 10083817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 15566637 - 15566498
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  15566637 ggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccgcaagtgggcggtgggattggtcc 15566539  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| ||||| |||||| |||||||||||||||||||||||    
T  15566538 cctcagattagtcgattcttggatcggataccgagttttca 15566498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 25289852 - 25289713
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| ||||||| |    
T  25289852 ggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-c 25289754  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  25289753 cctcgaattagtcgattcttggatcggataccgagttttca 25289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 35492970 - 35493108
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  35492970 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 35493069  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||| | ||||||||||||    
T  35493070 cctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 8097417 - 8097277
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||  ||||| | ||||||||||| |||||||   |||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  8097417 ggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 8097318  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  8097317 cctcggattagtcgattcttggatcggataccgagttttca 8097277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 32151485 - 32151621
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    |||||||| |||||||| |||||| |||||||||||   |||||||  ||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  32151485 ttcgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccc 32151584  T
Q  243 tcggattaatcgattattggatcggataccgagtttt 279  Q
    ||| |||| |||||| |||||||||||||||||||||    
T  32151585 tcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 46576407 - 46576547
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| ||||||  |||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||  |||||||||    
T  46576407 ggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtcggattggtcc 46576506  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||||| |||||| |||||||||||||||||||||||    
T  46576507 ccttggattagtcgattcttggatcggataccgagttttca 46576547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 53424314 - 53424175
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||||||||||| ||||||| |||||| || ||||||||||| |||||||||||  |||||| |||||||||    
T  53424314 ggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggctttaaacggg-cccccgcaagtgagcggtgggattggtcc 53424216  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  53424215 cctcggattagtcgattcttggatcggataccgagttttca 53424175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 18177025 - 18176887
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||| ||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  18177025 ggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 18176926  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    | |||||||| |||||| ||||||||||||| |||||||    
T  18176925 catcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 143 - 281
Target Start/End: Complemental strand, 45272552 - 45272414
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||||||| ||| |||||| ||||||||||||| |||| ||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||||    
T  45272552 ttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccc 45272453  T
Q  243 tcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| | || | |||||||||||||||||||||||    
T  45272452 tcggattagttgactcttggatcggataccgagttttca 45272414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 25379820 - 25379957
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||| ||||||| |||||| || |||||||||| |||||||  ||||| || ||||||||||||||||||||||  ||||||| |||||||||    
T  25379820 ggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagcgggcggtgggattggtcc 25379919  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||||| |||||| ||||||||||||| ||||||    
T  25379920 cctcggattagtcgattcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 24407322 - 24407458
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    |||||||| |||| |||  ||||| |||||| |||||  |||||||||||||| |||||||||||||||||  ||||||| ||||||| |||||||||||    
T  24407322 ttcgattctctctggtgctaatttcggtgggttaagtatatacagaatttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccc 24407421  T
Q  243 tcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| |||||| |||||||||||||||||||||    
T  24407422 tcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 26174172 - 26174312
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| ||| |||||| |||||| |||||| |||||||  ||||| || |||||||  |||||||||||||| ||||||| |||||||||    
T  26174172 ggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaatagggcccccgcaagtgggcggtgggattggtcc 26174271  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  26174272 cctcggattagtcgattcttggatcggataccgagttttca 26174312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 52455787 - 52455647
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | |||||  ||||| ||||||||||||||||||||||||||    |||| |||||||||    
T  52455787 ggttcgattccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaacggggcccccgcaagtgactggtgggattggtcc 52455688  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||| ||||||||||||||||    
T  52455687 cctcggattagtcgattcttggattggataccgagttttca 52455647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 53234048 - 53233909
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || || |||||||||||||||||||| ||||||| |||||||||    
T  53234048 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaaacggggcccccgcaagtgggcggtgggattggtcc 53233949  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  53233948 cctcggattagtcgattctt-gatcggataccgagttttca 53233909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 52821773 - 52821636
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| |||| |||||||| |||||||  ||||| || |||||||||||||||| | |||| ||||||| |||||||||    
T  52821773 ggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccc-gtaagtgggcggtgggattggtcc 52821675  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  52821674 cctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 30807291 - 30807151
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggc-ccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||| |||||||||| ||||||  |||||||     
T  30807291 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcggtaggattggt- 30807193  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  30807192 ccctcggattagtcgattcttggatcggataccgagttttca 30807151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 33398605 - 33398468
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||||||| ||||||||||||| || ||| |||||||  ||||| |  ||||||||||||||||||||||| ||||||| ||||||| ||    
T  33398605 gttcgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagctttaaacggggcccccgcaagtgggcggtgggattggttcc 33398506  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| |||| |||||| |||||||||||||||| ||||    
T  33398505 ctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 39041989 - 39041852
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    ||||||||| |||| ||| |||||| ||||||||||||| || ||||  ||||| || ||||||||||||||||||||||| || |||| |||||||||     
T  39041989 gttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtcca 39041890  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  39041889 ctcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 8958173 - 8958033
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaac-ggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||| |  ||||| |  |||||||  ||||||||||||||| ||||||| |||||||||    
T  8958173 gttcgatttcctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcc 8958074  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||||||||||| ||||||| |||||||||||||||    
T  8958073 cctctgattaatcgattcttggatcagataccgagttttca 8958033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 45529892 - 45529753
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| | | |||||| | ||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  45529892 ggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 45529793  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  45529792 cctcggattagtcgattctt-gatcggataccgagttttca 45529753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 48977447 - 48977587
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||| ||| ||| |||||| |||||| |||||| |||||||  ||||| || |||||||||||||||| |||||| ||||||| |||||||||    
T  48977447 ggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcggtgggattggtcc 48977546  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| |  |||||||||||||||||||||||    
T  48977547 cctcggattagtcggtccttggatcggataccgagttttca 48977587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 31537971 - 31537838
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcg 245  Q
    |||||||||| ||| |||||||||||||||||||| |||||||  || || || |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  31537971 gattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcg 31537872  T
Q  246 gattaatcgattattggatcggataccgagtttt 279  Q
     |||| || ||| |||||||||||| ||||||||    
T  31537871 aattagtcaattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 30257683 - 30257823
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| | ||| ||||||| |||||||  ||||| || ||||||| ||||||||||||||| |||||||  ||||||||    
T  30257683 ggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtggcattggtcc 30257782  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  30257783 cctcggattagtcgattcttggatcggataccgaattttca 30257823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 40940884 - 40941024
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||| ||||||| |||||||  ||||| |||||||||||||||||||| ||||| || |||  |||||||||    
T  40940884 ggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctgactttaaacggggcccccacaagtgggtggtaggattggtcc 40940983  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| || ||| ||| ||| |||||||||||||||    
T  40940984 cctcgaattactcaattcttgaatcagataccgagttttca 40941024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 34492712 - 34492575
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    ||||||||||||||  || |||||| | ||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||     
T  34492712 gttcgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcca 34492613  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
     || ||||| | |||| ||||||| |||||||||||||    
T  34492612 ttcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 2511435 - 2511295
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||  |||||||  | ||| |||||||||||||| || |||||||| ||||||| ||||||||     
T  2511435 ggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggattggtct 2511336  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| | |||| ||| |||||||||| ||||||||    
T  2511335 cctcgaattagtagattcttgaatcggataccaagttttca 2511295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 25344195 - 25344056
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||| | ||||||||||| |||| ||||||| ||||||| |||||| || ||||||||||||||||||| ||| |||| || |||||||      
T  25344195 ggtttgattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggctttaaacggggcccccgctagtgggcgatgggattggt-t 25344097  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||| ||||||||||||||    
T  25344096 cctcggattagtcgattcttagatcgaataccgagttttca 25344056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 1692893 - 1693030
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||| | |||||||||||| ||||| ||||||| |||||||| ||||| || ||||| || || ||||||||||| ||||||| |||| | ||    
T  1692893 ggttcgattccatttagtgtcaatttcggtggactaagtctatacagaacttgctctggctttagacagg-cccccgcaagtgggcggtgggatttgccc 1692991  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||| |||||| ||| |||||||||||||||||    
T  1692992 cctcagattagtcgattcttgaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 281
Target Start/End: Complemental strand, 24165817 - 24165713
Alignment:
Q  176 aagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgag 275  Q
    ||||| |||||||  ||||| || |||||||||||||||| |||||| ||||||| ||||| ||||||||||||| |||||| |||||||||||||||||    
T  24165817 aagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgag 24165719  T
Q  276 ttttca 281  Q
    ||||||    
T  24165718 ttttca 24165713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 54475781 - 54475878
Alignment:
Q  182 atacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||  |||||||| |||||||||||||| |||||||| ||||||| |||||||||||| |||||| |||||| ||||||| |||||||||||||    
T  54475781 atacagagcttgctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 48104986 - 48105073
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||| || |||||||| |||||||| ||||| |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  48104986 ttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 53288847 - 53288713
Alignment:
Q  144 tcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccct 243  Q
    |||||||||||| ||| |||||| ||||| ||||||| ||||| |  |||||||| |||||||||||| ||||||||   | |||||||||| |||||||    
T  53288847 tcgattccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaaacgggg-ccccgcaaacggacggtgagattagtcccct 53288749  T
Q  244 cggattaatcgattattggatcggataccgagtttt 279  Q
    || |||| |||||||||||||||| |||| ||||||    
T  53288748 cgaattagtcgattattggatcggttaccaagtttt 53288713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 11390656 - 11390801
Alignment:
Q  136 tttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagatt 235  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||| |||||||  ||||| || ||||||| ||| || |||||| |     ||||||||    
T  11390656 tttcaggtttgatttcctctggtgtcaattttggtgggctaagtccatacagagcttgctctgtctttaaatgggtcctccgcaaatgattcgtgagatt 11390755  T
Q  236 ggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
      ||||||||||||| |||||| ||||||||||||| |||||||||    
T  11390756 attcccctcggattagtcgattcttggatcggatactgagttttca 11390801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 53848501 - 53848432
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttca 53848432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 51532849 - 51532988
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    ||||||||| ||||| || |||||| ||||||||||||| |||||||  ||||| | |||||||| ||| ||||||||||| | ||||| ||||||||||    
T  51532849 gttcgattctctctaatgccaatttcggtgggctaagtccatacagagcttgctctaactttaaatgggacccccgcaagtggacggtgggattggtccc 51532948  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| ||||| ||| || |||   || ||||||||||||||    
T  51532949 ctcagattagtcggttcttgatccgaataccgagttttca 51532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 26108351 - 26108445
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagatt 235  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||| ||| ||||    
T  26108351 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 1178231 - 1178369
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    |||||||||| | || ||| |||||| ||||||| ||||| |||||||| |||||| || ||||||| ||||||||  || || ||||||| ||||||||    
T  1178231 ggttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggggcccca-cacgtgggcggtgggattggtc 1178328  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    || |||||||| |||| | |||||||||||||||||||||||    
T  1178329 cc-tcggattagtcgaatcttggatcggataccgagttttca 1178369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 7470353 - 7470245
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||| || |||||| ||||||||||||  |||||||  ||||| || |||||||||||| ||| |||||| ||| ||| |||||||||    
T  7470353 ggttcgattccctctaatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacgggg-ccctgcaagtgggcagtgggattggtcc 7470255  T
Q  241 cctcggatta 250  Q
    |||| |||||    
T  7470254 cctcagatta 7470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 1242036 - 1242139
Alignment:
Q  145 cgattccctctagtgtcaattttggtgggctaagtcaatacaga-atttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccct 243  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||  |||||| || ||||||||||||  ||||||||| |||||||  |||||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacgggg-tcccgcaagtgggcggtggaattggtcccct 1242134  T
Q  244 cggat 248  Q
     ||||    
T  1242135 tggat 1242139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 55371369 - 55371302
Alignment:
Q  204 aaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggatac 271  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||  |||||||||||||    
T  55371369 aaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 3747731 - 3747780
Alignment:
Q  232 gattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  3747731 gattggtcccctcggattagtcgattcttggatcggataccgagttttca 3747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 48972849 - 48972714
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| | |||| |||||  ||| ||| |||||| |||||||||||||  |||   ||||| || ||||| ||||||||    
T  48972849 ggttcgattccctctggtgccaatttcgatgggttaagttcatatagagtttgctctgactttaaacggatccc---caagtggggggtgaaattggtcc 48972753  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
      ||| |||| |||||| ||| |||||||||||||||||    
T  48972752 attcgaattagtcgattcttgaatcggataccgagtttt 48972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 6041809 - 6041670
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatt-tgctttgactttaaacggggcccccg-caagttggcggtgagattggtc 239  Q
    |||||||| || |||||| |||||| |||||  |||||| ||||||| || |||| ||||||||||||  ||||||  ||| | ||||||||||||| ||    
T  6041809 gttcgattgcccctagtgccaatttcggtggattaagtccatacagagttatgctctgactttaaacgaagcccccctcaaatgggcggtgagattgttc 6041710  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||  ||||| ||| || ||||||| |||||||||||||    
T  6041709 cccttagattagtcggttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 33698795 - 33698704
Alignment:
Q  190 tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| || ||||||||||||| ||||||| | || |||| |||||||||||||  |||| |||||| | ||||||||| |||||||||||    
T  33698795 tttgctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttca 33698704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 50731308 - 50731237
Alignment:
Q  208 ggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| | ||||| ||||||| ||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  50731308 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 50781546 - 50781617
Alignment:
Q  208 ggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| | ||||| ||||||| ||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  50781546 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 4048085 - 4048147
Alignment:
Q  217 gcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| | ||||| ||||||||||||||||||| | |||| |||||||||||||||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 7485599 - 7485531
Alignment:
Q  210 ggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||||| | ||||| |||||||||| |||||||| |||||| |||||||||||||||||||||    
T  7485599 ggcccctgcaagtggccggtgggattggtccc-tcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 26158934 - 26159003
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccga 274  Q
    ||||| |||||||||||| ||||||| ||||| ||||||||||||| ||| |  ||||||||||||||||    
T  26158934 aacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 8075142 - 8075100
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  8075142 gtttcaggttcgattccctctagtgtcaatttgggtgggctaa 8075100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 378
Target Start/End: Complemental strand, 17579087 - 17579049
Alignment:
Q  340 ttaacctatcaactaatatttttcatgaaaataatttaa 378  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  17579087 ttaacctatcaactaatatttttcaagaaaataatttaa 17579049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 4462693 - 4462829
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| |   |||||| | ||||||||||  |||||||  || || |  |||||||||||||||| |||||| | ||||| ||||| |||     
T  4462693 gttcgattccctctggcaccaatttcgatgggctaagttcatacagagcttactctagctttaaacggggcccc-gcaagtggacggtgggattgatcca 4462791  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||| |  ||| |||||| ||||||||||||||    
T  4462792 ctcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 7195922 - 7196006
Alignment:
Q  197 tgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| ||||| || || ||| ||| ||||||||||||| ||||| |||||| || |||  |||||||||||||||    
T  7195922 tgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagttttca 7196006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 14997755 - 14997807
Alignment:
Q  227 ggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| |||||||||||||| ||||||||||| ||| ||| |||||||||||||    
T  14997755 ggtgggattggtcccctcgaattaatcgattcttgtatcagataccgagtttt 14997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 29915407 - 29915292
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| | ||| ||| || ||| ||||||||||||  |||||||  ||||  || ||||||||||| ||||||||||| ||||||| ||||| |||    
T  29915407 ggttcgatttcttctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacggg-cccccgcaagtgggcggtgggattgatcc 29915309  T
Q  241 cctcggattaatcgatt 257  Q
    | ||| |||| ||||||    
T  29915308 catcgaattagtcgatt 29915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 29964560 - 29964445
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| | ||| ||| || ||| ||||||||||||  |||||||  ||||  || ||||||||||| ||||||||||| ||||||| ||||| |||    
T  29964560 ggttcgatttcttctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacggg-cccccgcaagtgggcggtgggattgatcc 29964462  T
Q  241 cctcggattaatcgatt 257  Q
    | ||| |||| ||||||    
T  29964461 catcgaattagtcgatt 29964445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 51390193 - 51390133
Alignment:
Q  219 aagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||||||||||||||||||||||||| ||| || || || |||||||||| ||||    
T  51390193 aagtgggcggtgagattggtcccctcggattagtcggttgttagaccggataccgattttt 51390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 4252463 - 4252404
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggatac 271  Q
    ||||| ||||| | ||||| ||||||||||||||||||| |||||  |||||||||||||    
T  4252463 cccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 25017574 - 25017613
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtc 180  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  25017574 ggttcgattccatctagtgtcaatttcggtgggctaagtc 25017613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 55287929 - 55287984
Alignment:
Q  226 cggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| ||||||| | |||| ||||||||||||||||||||||| ||||||    
T  55287929 cggtgggattagtccccttgaattagtcgattattggatcggataccgaattttca 55287984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 25017620 - 25017685
Alignment:
Q  213 ccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| ||||||| ||||||| || | |||||| |||||| |||||||| ||||||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttcctt-ggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31766799 - 31766852
Alignment:
Q  190 tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccct 243  Q
    ||||||||||||| ||||| |||||| |||||  ||||||| ||||||||||||    
T  31766799 tttgctttgacttaaaacgaggcccctgcaagcaggcggtgggattggtcccct 31766852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 32094836 - 32094755
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| ||||| |||| |||  || |||| ||||||||| |||  |||| ||| || |||||||||||||||||||||||    
T  32094836 ctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttca 32094755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 36720442 - 36720482
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggct 175  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  36720442 gtttcaggttcgattctctctagtgtcaatttaggtgggct 36720482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 39890656 - 39890604
Alignment:
Q  229 tgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||  ||||| || |||||| |||||||||||||||| ||||||    
T  39890656 tgagattggtccaatcggactagtcgattcttggatcggataccgaattttca 39890604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 7085764 - 7085624
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||  ||||| ||||||||||||||| |||||||||| ||||||| |||||||||    
T  7085764 ggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggtccccgcaagtgggcggtgggattggtcc 7085665  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  7085664 cctcggattagtcgattcttgaatcggataccgagttttca 7085624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 27498869 - 27498729
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| ||||| |  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  27498869 ggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 27498770  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  27498769 cctcggattagtcgattcttggatcggataccgagttttca 27498729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 8484799 - 8484659
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||| ||| |||||| ||||||||||||  |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  8484799 ggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 8484700  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  8484699 cctcggattagtcgattcttggatcggataccgagttttca 8484659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 15641243 - 15641104
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  15641243 ggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 15641144  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  15641143 cctcggattagtcgattctt-gatcggataccgagttttca 15641104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 18207266 - 18207406
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||  ||| |||||| ||||||||||||| |||||||  ||| | || ||||||||| ||||||||||||| ||||||| |||||||||    
T  18207266 ggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcc 18207365  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  18207366 cctcggattagtcgattcttggatcggataccgagttttca 18207406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 21236500 - 21236360
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||||||||||||||   ||||||||||| ||||||| ||| || |||||||||||||||||||||||||| ||||||| |||| ||||    
T  21236500 ggttcgattctctctagtgtcaatttcaatgggctaagtccatacagagttttctctgactttaaacggggcccccgcaagtgggcggtgggattagtcc 21236401  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| ||||| |||||| ||| |||||||||||||||||||    
T  21236400 cctcagattagtcgattcttgaatcggataccgagttttca 21236360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 30485887 - 30486027
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| |||||||||| ||||||||||||| |||||||  ||||| || |||||||||  |||||||||||| ||||||| |||||||||    
T  30485887 ggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcc 30485986  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| || ||| |||||||||||||||||||||||    
T  30485987 cctcggattagtcaattcttggatcggataccgagttttca 30486027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 32059578 - 32059438
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||| ||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  32059578 ggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 32059479  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| |  |||||||||||||||||||||||    
T  32059478 cctcggattagtcggtccttggatcggataccgagttttca 32059438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 34310201 - 34310339
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||  ||||| || ||||||||||| |||||  |||| | ||||| |||||||||    
T  34310201 ggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgggacccccataagtggacggtgggattggtcc 34310300  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  34310301 cctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 19456340 - 19456209
Alignment:
Q  149 tccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggat 248  Q
    ||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  19456340 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattggtcccctcggat 19456242  T
Q  249 taatcgattattggatcggataccgagttttca 281  Q
    || |||||| |||||||||||||||||||||||    
T  19456241 tagtcgattcttggatcggataccgagttttca 19456209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 38684267 - 38684406
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||| |||||||||||  |||||| |||||||||    
T  38684267 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccgcaagtgagcggtgggattggtcc 38684365  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  38684366 cctcggattagtcgattcttggatcggataccgatttttca 38684406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 11926640 - 11926501
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc-gcaagttggcggtgagattggtc 239  Q
    |||| |||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||| |||||| || |||| ||||||||    
T  11926640 ggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggtggtgggattggtc 11926541  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  11926540 ccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 35425082 - 35425212
Alignment:
Q  151 cctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggatta 250  Q
    ||||||||| |||||| ||||||||||||| |||||||  | ||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  35425082 cctctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggatta 35425181  T
Q  251 atcgattattggatcggataccgagttttca 281  Q
     |||||| |||||||||||||||| ||||||    
T  35425182 gtcgattcttggatcggataccgaattttca 35425212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 31288083 - 31287944
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||| | ||| |||||| |||||| |||||| ||||| |  |||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  31288083 gttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgactttaaacggggcccccgcaagtgggcggtgggattggtctc 31287984  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||| ||| || ||||| |||||||||||||||||    
T  31287983 ctcgaattagtcggttcttggaccggataccgagttttca 31287944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 13659354 - 13659245
Alignment:
Q  170 tgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggat 269  Q
    |||| |||||| ||| |||| |||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||    
T  13659354 tgggttaagtccatagagaacttgctttgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggat 13659255  T
Q  270 accgagtttt 279  Q
    ||||| ||||    
T  13659254 accgaatttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 33709638 - 33709501
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| ||| |||||| ||||||||||||| |||||||    ||| || ||||||||||| ||||| ||||| ||||||| ||||||||||    
T  33709638 gttcgattccctctggtgccaatttcggtgggctaagtccatacagaga--gctctggctttaaacgggacccccacaagtgggcggtgggattggtccc 33709541  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||| |||||| ||||||||||||||| |||||||    
T  33709540 ctcggattagtcgattcttggatcggataccgtgttttca 33709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 37495106 - 37495253
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc-------gcaagttggcggtgaga 233  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||  ||||| || |||||||||   |||||       |||||| ||||||| ||    
T  37495106 ggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgcccccccccccgcccgcaagtgggcggtggga 37495205  T
Q  234 ttggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37495206 ttggtcccctcggattagtcgattcttggatcggataccgagttttca 37495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 15971260 - 15971148
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| |||||  ||||||||| ||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||| ||||||||||||| |||    
T  15971260 ggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggacccccgcaagtgggcggtgagattgatcc 15971161  T
Q  241 cctcggattaatc 253  Q
    |||||||||||||    
T  15971160 cctcggattaatc 15971148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 4603837 - 4603976
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||| ||| ||| |||||| | ||||||||||| |||||||  | ||| || |||||||||||||||| |||||| | ||||| ||||||||||    
T  4603837 gttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggctttaaacggggcccctgcaagtggacggtgggattggtccc 4603936  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||| ||| |  |||||||||||||||||||||||    
T  4603937 ctcggattagtcggtccttggatcggataccgagttttca 4603976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 6014418 - 6014280
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| | ||| ||| |||||| |||||| |||||| |||||||  ||||| || |||||||||||| || ||||||| |||||||||||| ||||    
T  6014418 ggttcgattacttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggtccacgcaagtgggcggtgagattagtcc 6014319  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| |||||||||||| ||||||||    
T  6014318 cctcgaattagtcgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  201 tttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 274
Target Start/End: Complemental strand, 11465045 - 11464913
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| ||| |||||||||||||||||||  |||||||  || || || |||||||||||||||| |||||| || |||| |||||||||    
T  11465045 ggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggggcccc-gcaagtgggtggtgggattggtcc 11464947  T
Q  241 cctcggattaatcgattattggatcggataccga 274  Q
    ||||| |||| |||||| ||||||||||||||||    
T  11464946 cctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 10869703 - 10869563
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||| ||| ||  |||||| ||||||||||||| | || ||  ||||| || ||||||| |||||| |||||||| ||||||| |||||||||    
T  10869703 ggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatggggcctccgcaagtgggcggtgggattggtcc 10869604  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| || |||||||||||||| ||||||||    
T  10869603 cctcggattagtcggttcttggatcggataccaagttttca 10869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 38631048 - 38630977
Alignment:
Q  210 ggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38631048 ggcccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttca 38630977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 22392797 - 22392887
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| || ||||||||||||||||||||||| |||||||  |||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  22392797 ttgctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttca 22392887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 23270640 - 23270522
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||||||||||||| |||||||  |||||||| |||||||||| |||||||||| | | ||||| ||||||||||||||||||| | |||| ||    
T  23270640 caatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattctt 23270541  T
Q  261 ggatcggataccgagtttt 279  Q
    |||| ||||||| ||||||    
T  23270540 ggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 19145549 - 19145412
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||| ||||||| ||||| |||||||  |||||| || ||||||| ||  ||||||||||| ||||||| ||||||||    
T  19145549 ggttcgattccctctggtgccaatttcggtgggc-aagtccatacagagctttgctctggctttaaatggt-cccccgcaagtgggcggtgggattggtc 19145452  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| | | || |||||||||||||||||||||    
T  19145451 ccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 13038592 - 13038463
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||||| ||||||||||  |||||||    | | || ||||||||||||||||||||||| ||||||| ||||| |||    
T  13038592 ggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaag-tatggctttaaacggggcccccgcaagtgggcggtgggattgatcc 13038494  T
Q  241 cctcggattaatcgattattggatcggatac 271  Q
    ||||| |||| |||||| |||||||||||||    
T  13038493 cctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 13108587 - 13108458
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||||| ||||||||||  |||||||    | | || ||||||||||||||||||||||| ||||||| ||||| |||    
T  13108587 ggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaag-tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcc 13108489  T
Q  241 cctcggattaatcgattattggatcggatac 271  Q
    ||||| |||| |||||| |||||||||||||    
T  13108488 cctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 41351191 - 41351102
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| || ||||||||||||| || |||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  41351191 ttgctctggctttaaacggggctcc-gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttca 41351102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 12398586 - 12398446
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | |||||||||| ||||| ||||||  |||||||  ||||| || ||||||| ||||||||||||| | | ||||||||||| |||    
T  12398586 ggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctggctttaaatggggcccccgcaaatggacggtgagattgatcc 12398487  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
     |||  |||| ||| || |||||| ||||||||||||||||    
T  12398486 tctcaaattagtcggttcttggattggataccgagttttca 12398446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 9659430 - 9659311
Alignment:
Q  160 tcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattat 259  Q
    ||||||| ||||||||||||| ||||| |  ||||| || ||||||| ||| ||||||||||| | ||||| |||||||||| |||||||| | |||| |    
T  9659430 tcaatttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattct 9659331  T
Q  260 tggatcggataccgagtttt 279  Q
    ||||| ||||||||||||||    
T  9659330 tggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 27487673 - 27487554
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc-gcaagttggcggtgagattggtcccctcggattaatcgattat 259  Q
    |||||| ||||| ||||||| |||||||  ||||| |  |||||||||||| |||  |||||| ||||||| ||||||||||||||||||| |||||| |    
T  27487673 caatttcggtggactaagtccatacagagcttgctctagctttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagtcgattct 27487574  T
Q  260 tggatcggataccgagtttt 279  Q
    |||||||||||| |||||||    
T  27487573 tggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 34049897 - 34050008
Alignment:
Q  168 ggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcgg 267  Q
    ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| | ||||  ||||||||||||||||||| | |||| |   |||||    
T  34049897 ggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcgg 34049996  T
Q  268 ataccgagtttt 279  Q
    ||||||||||||    
T  34049997 ataccgagtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 281
Target Start/End: Complemental strand, 26009408 - 26009262
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagat 234  Q
    ||||| ||||||||||||| | ||| ||||||  |||||||||||| || ||||  || || || ||||||||||||||||||||||| ||  ||| |||    
T  26009408 gtttccggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaaacggggcccccgcaagtgggtagtgggat 26009309  T
Q  235 tggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    | |||||||||||||| ||| || ||| |||| ||| ||||||||||    
T  26009308 tagtcccctcggattagtcggttcttgaatcgaatatcgagttttca 26009262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 42193544 - 42193671
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| |||||  || |||||| ||||||||||||| ||||||| ||||||||| |||||||   || |||||||||| ||||||| | |||||||    
T  42193544 ggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaaa--tggaccccgcaagtgggcggtggggttggtcc 42193641  T
Q  241 cctcggattaatcgattattggatcggata 270  Q
     ||||||||| |||||| ||||||| ||||    
T  42193642 tctcggattagtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 41569006 - 41568867
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| |||||||||| ||||| ||||||| |||||||||||| |||| |||||||  ||  |||||||| | || |||| |||||||||    
T  41569006 ggttcgatttcctcttgtgtcaatttcggtggactaagtccatacagaatttgttttgtctttaaa-tggaaccccgcaaatgggtggtgggattggtcc 41568908  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||  ||||| | ||||||| |||| |||| ||||||||||    
T  41568907 cctaagattagttgattattcgatcagatatcgagttttca 41568867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 36954877 - 36955007
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||   ||||| || | |||||||| ||||||| ||||||||| ||||||| ||| ||||||||||| | | ||| |||| ||||    
T  36954877 ggttcgattccctctggttctaatttcggcgtgctaagtccatacagagtttgctttggctttaaatgggccccccgcaagtggactgtgggattagtcc 36954976  T
Q  241 cctcggattaatcgattattggatcggatac 271  Q
    ||||  |||| |||||| |||||||||||||    
T  36954977 cctcatattagtcgattcttggatcggatac 36955007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 12317291 - 12317153
Alignment:
Q  138 tcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattgg 237  Q
    ||||||| |||| | ||| |||||||||| |||||| ||||||    ||||  ||||| ||||||||| |||| ||||||||||| || |||| |||||     
T  12317291 tcgggtttgatttcatctggtgtcaatttcggtgggttaagtc----cagagcttgctctgactttaagcgggccccccgcaagtgggtggtgggattga 12317196  T
Q  238 tcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||||||| || ||| || ||||||||||||||||||||    
T  12317195 tccc-tcggattagtcaattcttagatcggataccgagttttca 12317153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 10631336 - 10631287
Alignment:
Q  232 gattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  10631336 gattggtcccctcggattagtcgattcttggatcggataccgagttttca 10631287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 279
Target Start/End: Original strand, 10399827 - 10399971
Alignment:
Q  136 tttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagatt 235  Q
    |||| |||| ||||| |||| | | |||||| | ||||||||||| |||| ||   |||| ||||||||||||||||||||| |||| | ||||| ||||    
T  10399827 tttcaggtttgattctctctggcgccaatttcgatgggctaagtccatacggagcatgctctgactttaaacggggcccccgtaagtggacggtgggatt 10399926  T
Q  236 ggtc-ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| |||||| |||| |||||| |||||||  ||| ||||||||    
T  10399927 ggtcaccctcgaattagtcgattcttggatcaaatagcgagtttt 10399971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 279
Target Start/End: Complemental strand, 25750741 - 25750613
Alignment:
Q  147 attccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcgg 246  Q
    ||||| ||| ||| |||||| |||||| |||||| ||| |||  ||||| || |||  |||||| |||||  |||| || ||||||||||||||| || |    
T  25750741 attccttctggtgccaatttcggtgggttaagtccatatagagcttgctctggctt--aacgggaccccc--aagtggggggtgagattggtcccttcag 25750646  T
Q  247 attaatcgattattggatcggataccgagtttt 279  Q
    |||| |||||| |||||||||||||||||||||    
T  25750645 attagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 5049202 - 5049333
Alignment:
Q  147 attccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcgg 246  Q
    ||||||||| ||  |||||| | ||| ||||||  |||||||  ||||| || ||||||||||| ||||||||| | | ||||| |||||||||| |||     
T  5049202 attccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggctttaaacggg-cccccgcaaatggacggtgggattggtcccatcga 5049300  T
Q  247 attaatcgattattggatcggataccgagtttt 279  Q
    |||| |||||| |||||||| ||||| ||||||    
T  5049301 attagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 5067392 - 5067447
Alignment:
Q  213 ccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcgga 268  Q
    |||||||||| ||||||| ||||||||||||| ||||| |||||| ||||||||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 24158304 - 24158166
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||| ||| |||||||||| | |||| |||||| ||||| |  ||| || || |||  ||||||||| | |||||| ||||||||||||||||    
T  24158304 ggttcgattccttctggtgtcaatttcgatggg-taagtccatacatagctttactctggcttagaacggggcctctgcaagtgggcggtgagattggtc 24158206  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| ||||| ||| |  ||| |||||||||||| ||||    
T  24158205 ccctcagattagtcggtccttgaatcggataccgaatttt 24158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 33737878 - 33737940
Alignment:
Q  218 caagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||||||||||||||||||||| ||| | |||| ||| |||||||||||||||||||    
T  33737878 caagtgggcggtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagttttca 33737940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 28614539 - 28614486
Alignment:
Q  226 cggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| ||||| |||||||| |||| |||||| |||||||||||||||||||||    
T  28614539 cggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 37972906 - 37972982
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| || ||||||||| ||| ||||||||| |||||||| |||||||||   || ||||| ||||||||||||||    
T  37972906 aacggagctcccgcaagtgggcagtgagattgatcccctcgaattaatcgacccttagatcgaataccgagttttca 37972982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 21377323 - 21377248
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttc 280  Q
    ||||||||| | |||||| || ||||||||||||| | | |||||| ||| |  ||||||||||||||||||||||    
T  21377323 aacggggcctctgcaagtgggtggtgagattggtctctttggattagtcggtctttggatcggataccgagttttc 21377248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 25548599 - 25548532
Alignment:
Q  214 cccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||  |||||| ||||||||  |||| |||| |||||| |||||||| ||||||||||||||    
T  25548599 cccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttca 25548532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 25586991 - 25587066
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc 216  Q
    ||||||||| ||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||| || |||||    
T  25586991 ggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacaggaccccc 25587066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 3600046 - 3599996
Alignment:
Q  231 agattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| ||||||||||||| |||||| ||||||| ||||||||| |||||    
T  3600046 agattgatcccctcggattagtcgattcttggatctgataccgagatttca 3599996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 7151454 - 7151500
Alignment:
Q  233 attggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| | |||| |||||| |||||||||||||||||||||    
T  7151454 attggtcccctagaattagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 15931118 - 15931211
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagatt 235  Q
    ||||||||||||||| ||| |||||| ||| ||||||||| |||||||   |||| || |||||||| |||| | ||||||| ||||||| ||||    
T  15931118 ggttcgattccctctggtgccaatttcggt-ggctaagtccatacagagcctgctctggctttaaacagggctctcgcaagtgggcggtgggatt 15931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 39787241 - 39787278
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  39787241 ctaaccaagctactaactctagtttacctatcaactaa 39787278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 930554 - 930486
Alignment:
Q  211 gcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||||| | | ||| ||||||||||||||||||| ||| |  |||||||||||| ||||||||    
T  930554 gccctcgcaagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagtttt 930486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 9100302 - 9100338
Alignment:
Q  243 tcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| | ||||||||||||||||||||||||||    
T  9100302 tcggattagttgattattggatcggataccgagtttt 9100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 17028273 - 17028237
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  17028273 ggtttgattccctctagtgtcaatttaggtgggctaa 17028237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 36895558 - 36895622
Alignment:
Q  215 ccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| ||||| | ||||| || ||||| |||| ||| || |||||||||||||||||||||    
T  36895558 ccgcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 4718708 - 4718848
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  4718708 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 4718807  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  4718808 cctcggattagtcgattcttggatcggataccgagttttca 4718848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 34237793 - 34237653
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||||||||||||||||  |||||| |||||||||    
T  34237793 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgagcggtgggattggtcc 34237694  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  34237693 cctcggattagtcgattcttggatcggataccgagttttca 34237653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 3734761 - 3734621
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||| | ||| ||| |||||||||    
T  3734761 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcagtgggattggtcc 3734662  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  3734661 cctcggattagtcgattcttggatcggataccgagttttca 3734621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 8765664 - 8765524
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| | ||||||||||| |||||||  ||||| || ||||||||||||| ||||||||| ||||||| |||||||||    
T  8765664 ggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 8765565  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  8765564 cctcggattagtcgattcttggatcggataccgagttttca 8765524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 39349319 - 39349459
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| ||||| |||    
T  39349319 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 39349418  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||| ||||||||    
T  39349419 cctcggattagtcgattcttggatcggataccaagttttca 39349459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 21603293 - 21603431
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||||||||| | |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  21603293 ggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21603392  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  21603393 cctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 2618248 - 2618389
Alignment:
Q  140 gggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||||||| ||| ||||||  |||||||||||| |||||||  ||||| || |||||||||| |||||||||||| ||||||| ||||||||    
T  2618248 gggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtc 2618347  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  2618348 ccctcggattagtcgattcttggatcggattccgagttttca 2618389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 32879342 - 32879482
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||  |||||||  ||||| |||| ||||||||||||||| ||||| ||||||| |||||||||    
T  32879342 ggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggattggtcc 32879441  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||| ||||||||||||||||    
T  32879442 cctcggattagtcgattcttggattggataccgagttttca 32879482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 6953145 - 6953008
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||| |||||||||||||||||||||| ||||||| |    
T  6953145 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtgggattggt-c 6953047  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||| ||||||||||||    
T  6953046 cctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 278
Target Start/End: Complemental strand, 15259544 - 15259407
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| |||||||  ||||||||    
T  15259544 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcc 15259445  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||| |||| |||||| ||||||||||| ||||||||    
T  15259444 cctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 28193537 - 28193674
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| |||||| |||||| |||||||  ||||| || ||||||||||||||||  ||||| ||||||| |||||||||    
T  28193537 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctacaagtgggcggtgggattggtcc 28193636  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  28193637 cctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 4698861 - 4698721
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||  |||| ||||| || |||||||||| ||||||||||||  |||||| |||||||||    
T  4698861 ggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaaacggagcccccgcaagtgagcggtgggattggtcc 4698762  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||||||  ||||| ||||||||||||||||    
T  4698761 cctcggattagtcgattcatggattggataccgagttttca 4698721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 42643254 - 42643118
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||| |||||||| |||||||||| ||||||| |||||||||||    
T  42643254 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtcccc 42643155  T
Q  243 tcggattaatcgattattggatcggataccgagtttt 279  Q
    ||| |||| | |||| |||||||||||||||||||||    
T  42643154 tcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 20305973 - 20306111
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||| ||| ||| |||||| | ||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||||    
T  20305973 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccc 20306072  T
Q  243 tcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||| |||||  |||||||||||||||||||||||    
T  20306073 tcgaattagtcgatccttggatcggataccgagttttca 20306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 21092606 - 21092744
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||| ||| ||| |||||| | ||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||||    
T  21092606 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccc 21092705  T
Q  243 tcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||| |||||  |||||||||||||||||||||||    
T  21092706 tcgaattagtcgatccttggatcggataccgagttttca 21092744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 25248412 - 25248547
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||| |||||||||| |||||| |||||| || ||||||||||| ||| ||||||| ||||||| |||||||||    
T  25248412 ggttcgattccctctggtgtcaatttcggtaggctaagtca-tacagagtttgctctggctttaaacggg-ccctcgcaagtgggcggtgggattggtcc 25248509  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| || ||||||||||||||||||    
T  25248510 cctcggattagtcgatt-tttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 19471672 - 19471813
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccc-cgcaagttggcggtgagattggtc 239  Q
    |||| |||||||||| ||| ||||||||||| |||||||| |||||||  ||||| || |||||||||||||||| ||||||| |||| || ||||||||    
T  19471672 ggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 19471771  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| |||| |||||  |||||||||||||||||||||||    
T  19471772 ccctcgaattagtcgatacttggatcggataccgagttttca 19471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 19542596 - 19542737
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccc-cgcaagttggcggtgagattggtc 239  Q
    |||| |||||||||| ||| ||||||||||| |||||||| |||||||  ||||| || |||||||||||||||| ||||||| |||| || ||||||||    
T  19542596 ggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 19542695  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| |||| |||||  |||||||||||||||||||||||    
T  19542696 ccctcgaattagtcgatacttggatcggataccgagttttca 19542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 19590100 - 19589959
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc-gcaagttggcggtgagattggtc 239  Q
    |||| |||||||||| ||| ||||||||||| |||||||| |||||||  ||||| || ||||||||||||||||| |||||| |||| || ||||||||    
T  19590100 ggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 19590001  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| |||| |||||  |||||||||||||||||||||||    
T  19590000 ccctcgaattagtcgatacttggatcggataccgagttttca 19589959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 42328067 - 42328207
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| ||||||||||  || |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||| ||||| | || || |||||||||    
T  42328067 ggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacgatgggattggtcc 42328166  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  42328167 cctcgaattagtcgattcttggatcggataccgagttttca 42328207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 2639500 - 2639409
Alignment:
Q  190 tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttca 2639409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 264537 - 264400
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |  ||||| || ||||||||||| ||||| ||| | ||||||||||||| |||    
T  264537 ggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacggg-cccccacaaatgggcggtgagattgatcc 264439  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| |||||||||||||||| ||||    
T  264438 cctcgaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 651384 - 651521
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |  ||||| || |||||||| |||||||| ||| | ||||||||||||| |||    
T  651384 ggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaac-gggcccccacaaatgggcggtgagattgatcc 651482  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| |||||||||||||||| ||||    
T  651483 cctcgaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 837119 - 837256
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |  ||||| || |||||||| |||||||| ||| | ||||||||||||| |||    
T  837119 ggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaac-gggcccccacaaatgggcggtgagattgatcc 837217  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| |||||||||||||||| ||||    
T  837218 cctcgaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 20469980 - 20470117
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||||| | |||||| | ||||||||||| |||||||  ||||| || |||||||| | |||||||||||| ||||||| |||||||      
T  20469980 ggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctggctttaaacagagcccccgcaagtgggcggtgggattggt-t 20470078  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  20470079 cctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 14633017 - 14633157
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||| ||||| ||  || ||||| ||||||| |||||||||    
T  14633017 ggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggctttgaacggagcgtccacaagtgggcggtgggattggtcc 14633116  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||||| |||||| |||||||||||||| ||||||||    
T  14633117 ccttggattagtcgattcttggatcggataccaagttttca 14633157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 34610825 - 34610685
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||  || |||||| ||||| ||||||| |||||||  ||||| || ||||||||| | ||| ||||||| ||||||   ||||||||    
T  34610825 ggttcgattccctctgatgccaatttcggtggtctaagtctatacagagcttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcc 34610726  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  34610725 cctcgaattagtcgattcttggatcggataccgagttttca 34610685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 270
Target Start/End: Original strand, 28088351 - 28088478
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||||| | |||||||||| |||||| |||||| |||||||  ||||| |||||||||| |||||| |||||||| ||||||| ||||| |||||    
T  28088351 ttcgattccctttggtgtcaatttcggtgggttaagtccatacagagcttgctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccc 28088450  T
Q  243 tcggattaatcgattattggatcggata 270  Q
    || || || |||||| ||||||||||||    
T  28088451 tcagaatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 1219407 - 1219552
Alignment:
Q  136 tttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagatt 235  Q
    |||| |||||||||||||||  | |||||||  |||||||||||| |||||||||||| | || |||||||||||||||||  |||| ||||||  |||     
T  1219407 tttcaggttcgattccctctgatatcaatttcagtgggctaagtccatacagaatttgttctggctttaaacggggcccccataagtgggcggtaggatc 1219506  T
Q  236 ggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| |||||||| |||||| || ||||| ||||||| ||||||    
T  1219507 ggtcccttcggattagtcgattcttagatcgaataccgaattttca 1219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 24018445 - 24018586
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggc-ccccgcaagttggcggtgagattggtc 239  Q
    ||||||||| |||||| |||||||||  |||||||||||| |||||||  ||||| || ||||||||||| | |||| ||||| ||||||||||||||||    
T  24018445 ggttcgatttcctctaatgtcaatttcagtgggctaagtccatacagagcttgctctggctttaaacgggcctccccacaagtgggcggtgagattggtc 24018544  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| | |||| ||| || ||||| |||||| ||||||||||    
T  24018545 cccttgaattagtcggttcttggaccggatatcgagttttca 24018586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 18532170 - 18532301
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||   ||||||||| ||||||||||||| |||||||| ||||| ||  ||||||||||||||| |||||| ||||||||||||         
T  18532170 ggttcgattccctcagatgtcaatttcggtgggctaagtccatacagaacttgctctggatttaaacggggcccctgcaagtgggcggtgagatt----- 18532264  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
        |||||| |||||| |||||||||||||||||||||||    
T  18532265 ----ggattagtcgattcttggatcggataccgagttttca 18532301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 10292118 - 10292255
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||  || ||||||  ||||||| |||| || ||||  ||||| || ||||||||||||||||| ||||| ||||||| |||||||||    
T  10292118 ggttcgattccctctgatgccaatttcagtgggctgagtccat-cagagattgctctggctttaaacggggcccccacaagtgggcggtgggattggtcc 10292216  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    | |||||||| | |||| |||||||| ||||||||||||    
T  10292217 cttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 18128625 - 18128714
Alignment:
Q  190 tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||| ||||| ||| || |||||||| ||||||||||||    
T  18128625 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 28964097 - 28964235
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||| ||| ||| |||||| ||||||||||||| |||| ||  |   | || ||||||||||||||||||||||| |||| || ||||||||||    
T  28964097 gttcgattccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccgcaagtgggcg-tgggattggtccc 28964195  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||| |||||| || ||||| |||| |||||||||    
T  28964196 ctcgaattagtcgattcttagatcgaatactgagttttca 28964235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 24999297 - 24999394
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggt 238  Q
    |||||||||||||||  || |||||||| ||||||||||  ||| |||  ||||| || ||||||||||||||||||||||| ||||||| |||||||    
T  24999297 ggttcgattccctctgatgccaattttgatgggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 24999394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 3403639 - 3403502
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| ||| ||| |||||| ||||||| ||||| ||||| || |||| |||| ||||||| ||||||| || |||| ||||||||| |||||||    
T  3403639 gttcgattccatctggtgccaatttcggtgggc-aagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggtgaggttggtcc 3403541  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| || ||| || || | |||||||||||||    
T  3403540 cctcgaattagtcaattcttagaccagataccgagtttt 3403502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 27746473 - 27746333
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttgg-cggtgagattggtc 239  Q
    ||||||||||||| | ||| |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||  ||||| || || ||  ||| |||    
T  27746473 ggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaaggggcccca-caagtggggcgatggaattagtc 27746375  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||| |||||| |||||||| ||| ||| ||||||    
T  27746374 ccctcggattagtcgattcttggatcgaatatcgatttttca 27746333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 1372539 - 1372409
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaattt-gctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||||||  ||||||||||| ||| | | ||| ||||||| ||| |||||||||| ||||||| ||||||||||  ||||||| ||||| ||    
T  1372539 ggttcgattccctctgatgtcaattttgatggac-aggtctatacagagttttgctttgacttaaaacgggccccccgcaagcaggcggtgggattgatc 1372441  T
Q  240 ccctcggattaatcgattattggatcggatac 271  Q
    ||||   |||||| |||  |||||||||||||    
T  1372440 ccctttaattaattgatccttggatcggatac 1372409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 2166762 - 2166897
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||  ||| ||||||  || ||||||||| |||||||  ||||| || |||||||   | |||| |||||| ||||||| |||||||||    
T  2166762 ggttcgattccctc--gtgccaatttcagtaggctaagtccatacagagcttgctctggctttaaataagacccc-gcaagtgggcggtgggattggtcc 2166858  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||| |||||| || ||| ||||||||||||||    
T  2166859 cctcagattagtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 7558018 - 7557952
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||||||||| | ||||| |||||||||||||| |||| |||||| ||| ||||||||||||||||    
T  7558018 cccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 33746945 - 33747085
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtca-atacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||||||||||| ||||| ||||||| || ||| ||| ||  |||| | ||  ||  ||||| |||||||||||| | |||||  ||||||     
T  33746945 ggttcgattccctctagtgttaatttcggtgggcaaattcatataaagc-tttgttctggtttagaacggagcccccgcaagtggacggtggaattggtt 33747043  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    | ||||||||| |||||  |||||||||||||||||||||||    
T  33747044 ctctcggattagtcgatccttggatcggataccgagttttca 33747085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 9047411 - 9047277
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcg 245  Q
    ||||||||||| || |||||||||||| ||||||| ||||| |  || || |||||||||||||  |||||||| || | | |||  |||||| |||| |    
T  9047411 gattccctctaatgccaattttggtggactaagtccatacaaagcttactctgactttaaacggaacccccgcatgtggacagtggaattggt-cccttg 9047313  T
Q  246 gattaatcgattattggatcggataccgagttttca 281  Q
     |||| ||| || |||||||||||||||| ||||||    
T  9047312 aattagtcggttcttggatcggataccgaattttca 9047277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  233 attggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 279
Target Start/End: Original strand, 28908880 - 28909025
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgaga 233  Q
    ||||| ||||| ||||||||| |||||||||   |||||| ||||| |||||||  |||| | || ||||||||||||| ||||||||| |||| || ||    
T  28908880 gtttcaggttcaattccctctggtgtcaattacagtgggc-aagtccatacagagctttgttctggctttaaacggggctcccgcaagtgggcgatgtga 28908978  T
Q  234 ttggtcccctcggattaatcgattattggatc-ggataccgagtttt 279  Q
    ||| ||||||| ||||| ||| |  ||||||| ||| ||||||||||    
T  28908979 ttgatcccctcagattagtcggtccttggatcgggacaccgagtttt 28909025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 43817828 - 43817754
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccga 274  Q
    |||||||| || ||||||||||| |||||||  ||||||| ||||  ||||||||||| ||||||||||| ||||    
T  43817828 ctttaaacaggacccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggatgccga 43817754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 21667608 - 21667713
Alignment:
Q  136 tttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagatt 235  Q
    |||| ||||||||| ||| | |||  ||||| ||||||||||||| |||||||  ||||| || |||||||||| ||  |||||||| |||||||  |||    
T  21667608 tttcaggttcgatttcctttggtgctaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggagcatccgcaagtgggcggtggaatt 21667707  T
Q  236 ggtccc 241  Q
    ||||||    
T  21667708 ggtccc 21667713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 5740431 - 5740381
Alignment:
Q  231 agattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||||||||| ||| |  |||||||||| ||||||||||||    
T  5740431 agattggtcccctcggattagtcggtccttggatcggacaccgagttttca 5740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 36848877 - 36848748
Alignment:
Q  151 cctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggatta 250  Q
    ||||| ||| |||||| ||||||||||||| |||| || ||||||  | ||||||| | ||| ||  ||||| ||||||| |||| ||||||||  ||||    
T  36848877 cctctggtgccaatttcggtgggctaagtccatacggagtttgctcgggctttaaatgaggcacca-caagtgggcggtgggattagtcccctcaaatta 36848779  T
Q  251 atcgattattggatcggataccgagttttca 281  Q
     ||| || |||||||||||||| | ||||||    
T  36848778 gtcggtttttggatcggataccaaattttca 36848748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 11819843 - 11819879
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  11819843 ggttcgattcactctagtgtcaatttgggtgggctaa 11819879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 16990722 - 16990786
Alignment:
Q  217 gcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| ||||||| || ||||||||| |||||| ||| |  |||||||||||||| ||||||||    
T  16990722 gcaagtgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttttca 16990786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 26168912 - 26168856
Alignment:
Q  216 cgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggatacc 272  Q
    ||||||| || | ||||||||||||||||||| || |||||| |||||||| |||||    
T  26168912 cgcaagtgggggatgagattggtcccctcggagtagtcgattcttggatcgaatacc 26168856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 33727882 - 33727846
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33727882 ggttcgattccctctagtgtcaatttggatgggctaa 33727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 44780123 - 44780087
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  44780123 ggtttgattccctctagtgtcaatttgggtgggctaa 44780087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 22119951 - 22120091
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  22119951 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 22120050  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  22120051 cctcggattagtcgattcttggatcggataccgagttttca 22120091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 40543048 - 40542908
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  40543048 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40542949  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  40542948 cctcggattagtcgattcttggatcggataccgagttttca 40542908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 2751334 - 2751474
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||| | ||||||| |||||||||    
T  2751334 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 2751433  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  2751434 cctcggattagtcgattcttggatcggataccgagttttca 2751474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 21835214 - 21835354
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  21835214 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21835313  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||| ||||||||||    
T  21835314 cctcggattagtcgattcttggatcggatatcgagttttca 21835354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 7275340 - 7275478
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||| |||||||||||||| ||||||| |||||||||    
T  7275340 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 7275439  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  7275440 cctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 29861733 - 29861873
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||| ||||| || ||||||||||||||||||||||| ||||||| ||||| |||    
T  29861733 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 29861832  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| || ||||||||||||||||||||    
T  29861833 cctcgaattagtcgattcttagatcggataccgagttttca 29861873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 16374059 - 16374197
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||||||| ||| |||||| |||||| |||||| |||||||||||||| || ||||||||||| ||||||||| | | ||||| |||||||||||    
T  16374059 ttcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccgcaaatggacggtgggattggtcccc 16374158  T
Q  243 tcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  16374159 tcggattagtcgattcttggatcggataccgagttttca 16374197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 17197087 - 17196950
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| ||| |||||| |||| |||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| ||||||||||    
T  17197087 gttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc 17196988  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| |||| |||||| |||||||||||||||||||||    
T  17196987 ctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 654842 - 654703
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  654842 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccgcaagtgggcggtgggattggtcc 654744  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| || |||||||||||||||||||||||    
T  654743 cctcggattagtcggttcttggatcggataccgagttttca 654703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 7176000 - 7175860
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||| || ||||||||||| ||||||| |||||||||    
T  7176000 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacaggacccccgcaagtgggcggtgggattggtcc 7175901  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||||||||||||| |||||||||    
T  7175900 cctcggattagtcgattcttggatcggatactgagttttca 7175860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 22703549 - 22703689
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  22703549 ggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcc 22703648  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||||||||| ||||||||    
T  22703649 cctcggattagtcgattctttgatcggatacccagttttca 22703689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 11997912 - 11998052
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||| ||||||||| ||||| |  ||||| || |||||||| |||||||||||||| ||||||| |||||||||    
T  11997912 ggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggctttaaactgggcccccgcaagtgggcggtgggattggtcc 11998011  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  11998012 cctcgaattagtcgattcttggatcggataccgagttttca 11998052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 18044170 - 18044308
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||| ||||| || ||||  ||||||||    
T  18044170 ggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggtggtggaattggtcc 18044269  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||| |||||| |||||||||||||||||||||    
T  18044270 cctcagattagtcgattcttggatcggataccgagtttt 18044308  T

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Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 281
Target Start/End: Original strand, 27312209 - 27312355
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagat 234  Q
    ||||| ||||||||||||||||||| |||||| | || || ||||| |||||||  |  || ||||||||||||| |||||||||||| ||||||| |||    
T  27312209 gtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgactttaaacggagcccccgcaagtgggcggtgggat 27312308  T
Q  235 tggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  27312309 tggtcccctcagattagtcgattcttggatcggataccgagttttca 27312355  T

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Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 23092167 - 23092299
Alignment:
Q  149 tccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggat 248  Q
    ||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||| | | ||||| |||||||||||||||||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggat 23092266  T
Q  249 taatcgattattggatcggataccgagttttca 281  Q
    || ||||||  ||||||||||||||||||||||    
T  23092267 tagtcgattcatggatcggataccgagttttca 23092299  T

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Target: chr7; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 2344364 - 2344502
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||  ||  |||| ||||||||||| |||||||||||  |||||| |||||||||||    
T  2344364 ttcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggctttaaacgggacccccgcaagtgagcggtgggattggtcccc 2344463  T
Q  243 tcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| ||| |  |||||||||||||||||||||||    
T  2344464 tcggattagtcggtccttggatcggataccgagttttca 2344502  T

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Target: chr7; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 3851840 - 3851958
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||||||||||||| ||| |||  ||||| || ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||| ||    
T  3851840 caatttcggtgggctaagtccatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt 3851939  T
Q  261 ggatcggataccgagtttt 279  Q
    |||||||||||||||||||    
T  3851940 ggatcggataccgagtttt 3851958  T

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Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 282
Target Start/End: Complemental strand, 21217971 - 21217830
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||  || |||||| ||||||||||||| |||||||  ||||| |  ||||||||||| ||||| ||||| ||||||| ||||| |||    
T  21217971 ggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagctttaaacgggccccccacaagtgggcggtgggattgatcc 21217872  T
Q  241 cctcggattaatcgattattggatcggataccgagttttcag 282  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  21217871 cctcggattagttgattcttggatcggataccgagttttcag 21217830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 23012646 - 23012506
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||| ||||| ||||||| |||||||||    
T  23012646 ggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccacaagtgggcggtgggattggtcc 23012547  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| || |||  | ||||||||||||||||||||    
T  23012546 cctcgtattagtcaattcattgatcggataccgagttttca 23012506  T

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Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 28089879 - 28090022
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaat----ttgctttgactttaaacggggcccccgcaagttggcggtgagattg 236  Q
    |||||||| |||||| |||||||||| ||||||||||||| ||||| | |    ||||| || ||||||| ||| ||||||||||| |||| ||||||||    
T  28089879 ggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatggg-cccccgcaagtgggcgatgagattg 28089977  T
Q  237 gtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  28089978 gtcccctcggattagtcgattcttggatcggataccgagttttca 28090022  T

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Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 2103118 - 2103256
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||||||||| ||||||| ||||||| |    
T  2103118 ggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgggattggt-c 2103216  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||||||  | ||||||||||||||||||||    
T  2103217 cctcggattagtcgattcat-gatcggataccgagttttca 2103256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 10091251 - 10091390
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| |||| |||||||||| ||||||| ||||| |||    
T  10091251 ggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcc 10091350  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || |||| |||||||||||||||    
T  10091351 cctcggattagtcgattctt-gatccgataccgagttttca 10091390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 27009422 - 27009561
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgc-aagttggcggtgagattggtc 239  Q
    |||||||| |||||| ||| |||||| ||||||||||||| |||||||  ||||| ||||||||||||||||||| || |||| | ||||| ||||||||    
T  27009422 ggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccctgcaaagtggacggtgggattggtc 27009521  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||  |||| |||||| |||||| ||||||||||||||    
T  27009522 ccctcaaattagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 41907651 - 41907514
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| ||||||  |||||||||||| |||||||  ||||| || ||||||||| ||||||||||||| || |||| |||||||||    
T  41907651 ggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcc 41907552  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    || | ||||| |||||| |||||||||||||||||||||    
T  41907551 cc-cagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 19421294 - 19421431
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| | ||| |||||||||| | ||||||||||| |||||||  ||||| |||||||||| ||||| ||| ||||| ||||||| ||||||||     
T  19421294 ggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagcttgctctgactttaaatggggcgcccacaagtgggcggtgggattggtct 19421393  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||||| |||||| ||| ||| ||||||||||||    
T  19421394 cctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 22643479 - 22643342
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||| |||||  ||||||||| ||| ||||||||| |||||||  ||||| ||||||||||||| |||| ||||||| | ||||| |||| |||||    
T  22643479 gttcgatttcctctgatgtcaatttcggtaggctaagtccatacagagcttgctctgactttaaacggagccctcgcaagtggccggtgtgattagtccc 22643380  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||||||||| || |||| |||||| ||||||    
T  22643379 ctcggattaatcgattctttgatcagataccaagtttt 22643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 281
Target Start/End: Original strand, 31197669 - 31197793
Alignment:
Q  157 gtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgat 256  Q
    |||||||||| |||||  |||||| |||||||  ||||| |  ||||||||||||||||||||||| | ||||| ||||||||||||| ||||| |||||    
T  31197669 gtgtcaatttcggtggattaagtccatacagatcttgctcttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgat 31197768  T
Q  257 tattggatcggataccgagttttca 281  Q
    | |||||||||||| ||||||||||    
T  31197769 tcttggatcggatatcgagttttca 31197793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 278
Target Start/End: Original strand, 32849651 - 32849791
Alignment:
Q  138 tcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattgg 237  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| | || ||  ||||| || ||||||| ||| | |||  |||| ||| ||| ||||||    
T  32849651 tcgggtttgattccctctagtctcaattttggtgggctaagtccacactgagcttgctctggctttaaatgggactcccataagtgggcagtgggattgg 32849750  T
Q  238 tcccctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||||| ||||| |||||| ||||||||||||||||||||    
T  32849751 tcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 42913631 - 42913511
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| | |||| |||||| |||| ||| ||||| || ||||||||||||||||||||||| | ||||| ||||||||||||||||||| | |||| ||    
T  42913631 caatttcgatgggataagtccatacggaacttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattctt 42913532  T
Q  261 ggatcggataccgagttttca 281  Q
     ||||||||||||||||||||    
T  42913531 agatcggataccgagttttca 42913511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 9683895 - 9684026
Alignment:
Q  147 attccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcgg 246  Q
    ||||||||||||| |||||| ||||||||||||| |||| ||  || || || |||||||||||| |||| ||||| ||||||  ||| |||||||||||    
T  9683895 attccctctagtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcgg 9683994  T
Q  247 attaatcgattattggatcggataccgagttt 278  Q
    ||||||||||| ||||||||  ||||||||||    
T  9683995 attaatcgattcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 31273978 - 31274116
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| | |  ||||| || |||||||||| |||||||  ||||| || ||||||||||||| || |||||| ||| ||||||||||||||    
T  31273978 gttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaaacggggctcc-gcaagtgggcagtgagattggtccc 31274076  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||| |||||| ||||| |||||||||||||||||    
T  31274077 ctcgaattagtcgattcttggaccggataccgagttttca 31274116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 43785436 - 43785297
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    ||||||||||| || |||  |||||  |||| ||||||| |||||||  || || ||  ||||||||||||| |||||||| | ||||||||||||||||    
T  43785436 gttcgattcccacttgtgctaatttcagtggactaagtccatacagagcttactctggttttaaacggggcctccgcaagtggacggtgagattggtccc 43785337  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    || |||||| |||||| ||||||||||||||||| |||||    
T  43785336 cttggattagtcgatttttggatcggataccgagctttca 43785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 28950934 - 28951072
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||| ||||||| ||| |||||| ||||||||||||  ||| |||  ||||| || ||||||||||| ||| ||||||| ||||||| |||||||||    
T  28950934 ggttcgactccctctggtgccaatttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcc 28951033  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| | ||  | ||| |||||||||||||||||||||    
T  28951034 cctcgaactagacaattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 17212116 - 17212255
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||| |||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || ||| ||||||| |||| ||||||  | |||| |||||||||    
T  17212116 ggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctctggcttaaaacgggacccctgcaagtgagtggtgggattggtcc 17212215  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||||||| |||||| ||||||||    
T  17212216 cctcggattagtcgattcttggatcagatacc-agttttca 17212255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 21373788 - 21373888
Alignment:
Q  156 agtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcga 255  Q
    |||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| | ||||||||||||||| | ||||||| ||||    
T  21373788 agtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcga 21373887  T
Q  256 t 256  Q
    |    
T  21373888 t 21373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 21574176 - 21574100
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||    
T  21574176 aacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttttca 21574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 31712981 - 31712902
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||| ||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  31712981 ctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 39145790 - 39145652
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaata-cagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||| | ||| |||||| ||||||||||||||||| ||||  ||||| || ||||||||||| |||| |||||| | ||||| ||||||||    
T  39145790 ggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacggg-cccctgcaagtggacggtgggattggtc 39145692  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||| |||||| ||| ||| |||||| ||||||    
T  39145691 ccctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 36772421 - 36772303
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||||||||||||  |||||||  ||||| || ||||||||||||||||||  ||| |||||||  ||| |||| ||||||||| |||||| ||    
T  36772421 caatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctt 36772322  T
Q  261 ggatcggataccgagtttt 279  Q
     ||||||||||||||||||    
T  36772321 tgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 22638355 - 22638488
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||  ||||| |||||| |||||     ||||  ||||| || |||||||||||||| |||||||| ||||||| ||||| ||     
T  22638355 ggttcgattccctctggtgctaatttcggtgggttaagtt----cagagcttgctctggctttaaacggggcctccgcaagtgggcggtgggattgatct 22638450  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||| |||| |||||| ||||||||||||||||||||    
T  22638451 cctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 28647032 - 28647170
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaattt-gctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||| ||||||| ||||||||||||| ||| ||| || |||  |||||||||||| ||||| ||||||| |||||||     
T  28647032 ggttcgattccctctggtgccaatttcggtgggc-aagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattggtt 28647130  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||| ||  |  |||||||||||| ||||||||    
T  28647131 ccctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 279
Target Start/End: Complemental strand, 33137951 - 33137825
Alignment:
Q  152 ctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaa 251  Q
    |||| ||||||||||| |||||||||||| |||||||  | ||| |  ||||||| |||||||  |||||| |||||||| ||||||||||||| ||||     
T  33137951 ctctggtgtcaattttagtgggctaagtccatacagagctcgctctagctttaaatggggccct-gcaagtgggcggtgaaattggtcccctcgaattag 33137853  T
Q  252 tcgattattggatcggataccgagtttt 279  Q
    |||||| || ||||||||| ||||||||    
T  33137852 tcgattcttagatcggatatcgagtttt 33137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 25333522 - 25333603
Alignment:
Q  197 tgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| || ||||||||||| ||| ||| ||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  25333522 tgactttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 27704065 - 27704202
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||| | ||| |||||| ||||||||||||| ||| |||  |||||||| ||||||| ||  ||||||||||| || |||| ||||| |||    
T  27704065 ggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatgga-cccccgcaagtgggtggtgtgattgatcc 27704163  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||| |||||| ||| ||| |||||||||||||    
T  27704164 cctcagattagtcgattcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 23330877 - 23330737
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||| ||||||  ||| |||||| ||||||| ||||| |||||||  |||||| || ||| ||||||| || |||||||| |||||| |||||||||    
T  23330877 ggttcgactccctccggtgccaatttcggtgggc-aagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggtaagattggtc 23330779  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||  |||| || ||  |||||||||||||||||||||||    
T  23330778 ccctcaaattagtcaatccttggatcggataccgagttttca 23330737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 9718124 - 9717985
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| |||||||||| | ||||||||||| ||| |||  ||||| || ||||||||||||||| | ||| |  ||||||  ||||||| |    
T  9718124 gttcgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctc 9718025  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||| ||| || ||| |||| |||| |||||||||    
T  9718024 ctcgaattagtcggttcttgaatcgaatactgagttttca 9717985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 14199804 - 14199730
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccc 215  Q
    |||||||||||||||| || |||||||||||||||||||| ||| |||  ||||| || ||||||||||||||||    
T  14199804 ggttcgattccctctaatgccaattttggtgggctaagtctatatagagcttgctctgcctttaaacggggcccc 14199730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 274
Target Start/End: Complemental strand, 1766280 - 1766149
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||| | |||||||||| |||||| |||||| |||||||| ||||| ||| |||  |||||||||||  ||||| ||||||  |||||||||    
T  1766280 gttcgattcccttttgtgtcaatttcggtggg-taagtccatacagaactttgccttggcttagaacggggcccca-caagtgggcggttggattggtcc 1766183  T
Q  241 cctcggattaatcgattattggatcggataccga 274  Q
    |||||||||| ||| |  ||| ||||||||||||    
T  1766182 cctcggattagtcggtacttgaatcggataccga 1766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 42814927 - 42814992
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaa 206  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||| |  ||||| ||||||||||    
T  42814927 ggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctgactttaaa 42814992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 8943468 - 8943409
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggatac 271  Q
    ||||||||||| ||||||| |||||||||||| | |||| |||||| |||||||||||||    
T  8943468 cccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatac 8943409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 25102887 - 25102809
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| ||||||||||||| || ||||| ||||||| || |||||||| |||||| ||||||| |||||||| ||||    
T  25102887 ctttaaacagggcccccgcaag-tgacggtgggattggttccttcggattagtcgattcttggatcagataccgattttt 25102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 33181219 - 33181183
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33181219 ggttcgattccctctagtgtcaatttgggtgggctaa 33181183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 48983742 - 48983706
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||||||||    
T  48983742 ggttcgattccctctagtgtcaatttgggtgggctaa 48983706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 22299958 - 22300005
Alignment:
Q  234 ttggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| ||||||||| |||||| ||| |||||||||||||||||||    
T  22299958 ttggtcctctcggattagtcgattcttgaatcggataccgagttttca 22300005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 22696459 - 22696522
Alignment:
Q  216 cgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| ||||| | ||||||||| ||||||||| ||| |  |||||||||||||||||||||    
T  22696459 cgcaagtaggcggcgggattggtcctctcggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 30345566 - 30345511
Alignment:
Q  222 ttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtt 277  Q
    ||||||||| ||||||||||||||| ||| ||| || || ||||||||||||||||    
T  30345566 ttggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 13332477 - 13332432
Alignment:
Q  236 ggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  13332477 ggtccactcggattagtcgattcttggatcagataccgagttttca 13332432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 36173092 - 36173144
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacaga 188  Q
    ||||| ||||||||||||||| ||| |||||||||||||| ||||| |||||||    
T  36173092 gtttcaggttcgattccctcttgtgccaattttggtgggc-aagtccatacaga 36173144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 25471962 - 25471990
Alignment:
Q  327 ctactaactctagttaacctatcaactaa 355  Q
    |||||||||||||||||||||||||||||    
T  25471962 ctactaactctagttaacctatcaactaa 25471990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 40332195 - 40332243
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggat 248  Q
    ||||| |||||||| || ||||| ||||||| |||||||||||||||||    
T  40332195 ctttagacggggcctccacaagtgggcggtgggattggtcccctcggat 40332243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 27528933 - 27528793
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||| ||||||||||||||||| |||||||||||||||||    
T  27528933 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttatacggggcccccgcaagtgggcggtgagattggtcc 27528834  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  27528833 cctcggattagtcgattcttggatcggataccgagttttca 27528793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 34844896 - 34844756
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  34844896 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 34844797  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  34844796 cctcggattagtcgattcttggatcggataccgagttttca 34844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 40058990 - 40058850
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  40058990 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40058891  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  40058890 cctcggattagtcgattcttggatcggataccgagttttca 40058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 52983678 - 52983815
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| ||||||  |||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  52983678 ggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 52983777  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  52983778 cctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 32986256 - 32986396
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||| ||||||||| ||| |||||| ||||||||||||| |||||||  ||||| |||||||||| ||||||||||||||| ||||||| |||||||||    
T  32986256 ggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcc 32986355  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| || |||||| |||||||||||||||||||||||    
T  32986356 cctcggaatagtcgattcttggatcggataccgagttttca 32986396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 44343574 - 44343713
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| |||  ||||||||||||||||||| |||||||  ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||    
T  44343574 gttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgactttaaacggggctcccgcaagtgggcggtgggattggtccc 44343673  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||| |||||| ||| |||||||||||||||||||    
T  44343674 ctcgaattagtcgattcttgaatcggataccgagttttca 44343713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 280
Target Start/End: Complemental strand, 21387623 - 21387486
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||  ||||| || |||||||||||  |||||||||| ||||||| |  ||||||    
T  21387623 ggttcgattccctatagtgtcaattttggtgggctaagtctatacagagcttgctctggctttaaacgggatccccgcaagtgggcggtggg--tggtcc 21387526  T
Q  241 cctcggattaatcgattattggatcggataccgagttttc 280  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  21387525 cctcggattagtcgattattggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 32990494 - 32990634
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| ||||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  32990494 ggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 32990593  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| || |||||| |||||||| |||| |||||||||    
T  32990594 cctcggactagtcgattcttggatcgaatactgagttttca 32990634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 34723858 - 34723996
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| ||||| |  ||||| || ||||||||||||||||||||||| || |||| |||||||||    
T  34723858 ggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtcc 34723957  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
     ||||||||| |||||| |||||||||||||||||||||    
T  34723958 tctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 5609340 - 5609200
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||||||||| | ||||| ||||| |||    
T  5609340 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattgatcc 5609241  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  5609240 cctcggattagtcgattcttggatcggataccgagttttca 5609200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 36131648 - 36131508
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||| ||||||| |||||||  ||||| |||||||||||||| |||||| |||| ||||||| |||||||||    
T  36131648 ggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgggcggtgggattggtcc 36131549  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||||||||| |||| |||||||||||||||    
T  36131548 cctcggattagtcgattattagatcagataccgagttttca 36131508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 54127480 - 54127340
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||| ||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  54127480 ggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 54127381  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| || ||||| ||||||| |||||||||    
T  54127380 cctcggattagtcggttcttggaccggatactgagttttca 54127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 33696417 - 33696279
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||| ||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||||||||| |||||||||||||||||    
T  33696417 ggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgagattggtcc 33696318  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
     ||||||||| || ||| |||||||||||| ||||||||    
T  33696317 tctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 9517779 - 9517650
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| ||||||  |||||||||||| |||||||  ||||| ||||||||||||||||||||||| || || ||||||||||||||    
T  9517779 ggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagattggtcc 9517680  T
Q  241 cctcggattaatcgattattggatcggata 270  Q
    |||||||||| |||||| ||||||||||||    
T  9517679 cctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 45787842 - 45787702
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||  || ||||||  |||||||||||| |||||||  ||||| || |||||||| |||||||||||||| | ||||| |||||||||    
T  45787842 ggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtggacggtgggattggtcc 45787743  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  45787742 cctcgaattagtcgattcttggatcggataccgagttttca 45787702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 20566409 - 20566547
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||| ||||| |||||||  ||||| || |||||||||| |||||||||||| |||| || |||||||||    
T  20566409 ggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcgctgggattggtcc 20566508  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||| |||||| |||||||||||| ||||||||    
T  20566509 cctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 49287917 - 49288054
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| |||| ||||||||||||    
T  49287917 ggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaaacggg-ctcccgcaagtgggcgctgagattggtcc 49288015  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| ||||||| ||||| |||||||    
T  49288016 cctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 277
Target Start/End: Complemental strand, 20078122 - 20077986
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| ||||||| || ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||||||||||| |||| ||||||| |||| || |    
T  20078122 ggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgtaagtgggcggtgggattagttc 20078023  T
Q  241 cctcggattaatcgattattggatcggataccgagtt 277  Q
    |||||||||| |||||| |||||||||||||||||||    
T  20078022 cctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 19660649 - 19660530
Alignment:
Q  162 aattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattg 261  Q
    ||||| |||||| |||||| |||||||  ||||| || |||||||| |||||||||||||| ||||||| ||||| ||||||||||||| |||||| |||    
T  19660649 aatttcggtgggataagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 19660550  T
Q  262 gatcggataccgagttttca 281  Q
    ||||||||||||||||||||    
T  19660549 gatcggataccgagttttca 19660530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 46714459 - 46714592
Alignment:
Q  148 ttccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcgga 247  Q
    |||||| | ||| |||||| ||||||||||||| |||||||  ||||  |  ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  46714459 ttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgga 46714558  T
Q  248 ttaatcgattattggatcggataccgagttttca 281  Q
    ||| || ||| ||| |||||||||||||||||||    
T  46714559 ttagtcaattcttgaatcggataccgagttttca 46714592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 18875654 - 18875515
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||  ||||||||| ||||||||||||| |||||||  ||||| || |||||||| |||||||| ||||| ||  ||| ||||| |||    
T  18875654 ggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaac-gggcccccacaagtgggtagtgggattgatcc 18875556  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| || ||| ||||||| |||||||||||||||    
T  18875555 cctcggattagtcaatttttggatcagataccgagttttca 18875515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 27574397 - 27574517
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||| |||||| |  |||||||  ||||| || ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||    
T  27574397 caatttcggtaggctaaattcatacagagcttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattctt 27574496  T
Q  261 ggatcggataccgagttttca 281  Q
    ||||||||||| |||||||||    
T  27574497 ggatcggatactgagttttca 27574517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 13550273 - 13550404
Alignment:
Q  147 attccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcgg 246  Q
    ||||||||||||| |||||| ||||||||||||| |||| ||  || || || |||||||||||| |||| ||||| ||||||  ||| |||||||||||    
T  13550273 attccctctagtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcgg 13550372  T
Q  247 attaatcgattattggatcggataccgagttt 278  Q
    ||||||||||| ||||||||  ||||||||||    
T  13550373 attaatcgattcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 25852273 - 25852412
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaa-cggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||| |||| ||| ||||||| |||  || ||||||||    
T  25852273 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattggtc 25852372  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| ||| || ||||| |||||||||||||||    
T  25852373 ccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 55961881 - 55961752
Alignment:
Q  151 cctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggatta 250  Q
    ||||| ||| |||||| ||||||||||||| |||||||  ||||| ||||||||||||||| |||| ||||| ||||||| ||||||| || ||||||||    
T  55961881 cctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacgggg-ccccacaagtgggcggtgggattggttccttcggatta 55961783  T
Q  251 atcgattattggatcggataccgagttttca 281  Q
    ||||||| ||| |||| ||||||| ||||||    
T  55961782 atcgattcttgaatcgaataccgaattttca 55961752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 35229227 - 35229365
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccg-caagttggcggtgagattggtc 239  Q
    ||||||||||| |||| || |||||| ||||||||||||| ||||| |  ||||| |||||||||||||| |||||  |||||  |||||| ||||||||    
T  35229227 ggttcgattccttcta-tgccaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggtccccccacaagtgagcggtgggattggtc 35229325  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||| |||||| |||||||||||||||| ||||    
T  35229326 ccctcgaattagtcgattcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 4911974 - 4912125
Alignment:
Q  134 agtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctt----tgactttaaacggggcccccgcaagttggcggt 229  Q
    |||||| ||||||||||||||| |||| ||||||||||| ||| ||| ||| |||  ||||||    || |||||||||| |||||||||||| || |||    
T  4911974 agtttcaggttcgattccctctggtgttaattttggtggcctatgtccatatagagcttgcttgctctggctttaaacggagcccccgcaagtgggtggt 4912073  T
Q  230 gagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    | ||||| ||||| || |||| |||||| ||||||| |||||||||||||||    
T  4912074 gtgattgatccccccgaattagtcgattcttggatcagataccgagttttca 4912125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 51535672 - 51535818
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa----gtcaatacagaatttgc---tttgactttaaacggggccccc-gcaagttggcggtgag 232  Q
    ||||||||||||||| ||| |||||||||||||||||    ||| |||||||  ||||   | || ||||||||||||||||| |||||| ||||||| |    
T  51535672 ggttcgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggtggg 51535771  T
Q  233 attggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||| |||| |||||| || ||||||||||||| ||||    
T  51535772 attggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 51595101 - 51595219
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| | ||| |||| |||||| |||| ||||| ||||||||||||||  |||||||||| | |||||  |||| || | ||||||||||||||| ||    
T  51595101 caatttcgatggactaaatcaatagagaacttgctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatcgattctt 51595200  T
Q  261 ggatcggataccgagtttt 279  Q
    |||||||||||||||||||    
T  51595201 ggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 32942429 - 32942562
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| ||||  || |||||| ||||||||||||| |||||||  || || || ||||||||||  ||||| ||||| | ||||| |||||||||    
T  32942429 ggttcgattctctctgatgccaatttcggtgggctaagtccatacagagcttactctggctttaaacggcccccccacaagtggacggtgggattggtcc 32942528  T
Q  241 cctcggattaatcgattattggatcggataccga 274  Q
    |||||||| |||||||| |||||| ||| |||||    
T  32942529 cctcggataaatcgattcttggattggaaaccga 32942562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 35674879 - 35674791
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggt 229  Q
    ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||    
T  35674879 ggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggggcccccgcaagtgggcggt 35674791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 34835589 - 34835726
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc-gcaagttggcggtgagattggtcc 240  Q
    |||||||||||||| |||||||||| ||||||||||||| |||| ||  |   | || |||||||  |||||||| |||||| |||| ||||||||||||    
T  34835589 gttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatgtctggctttaaatagggccccccgcaagtgggcg-tgagattggtcc 34835687  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| || ||||| |||| |||||||    
T  34835688 cctcggattagtcgattcttagatcgaatactgagtttt 34835726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 12824464 - 12824597
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcg 245  Q
    |||||||||| |||||||||||| ||||||||||  ||| ||| |||||| |  ||||||| || || || |||||| | ||||| |||||||| | |||    
T  12824464 gattccctcttgtgtcaattttgatgggctaagttcatatagagtttgctctagctttaaatggagctcctgcaagtggacggtgggattggtctcatcg 12824563  T
Q  246 gattaatcgattattggatcggataccgagtttt 279  Q
     |||| |||||| ||||||||||||| |||||||    
T  12824564 aattagtcgattcttggatcggatacggagtttt 12824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 4064981 - 4065057
Alignment:
Q  203 taaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| |||||| ||||| ||||||| ||||||||||||||||||| |||||| |||||||||||| ||| ||||    
T  4064981 taaacggagcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 33992685 - 33992773
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggt 229  Q
    |||||||||| |||| ||| |||||| ||||||||||||| ||||| |  ||||| || ||||||||||||||||||||||| ||||||    
T  33992685 ggttcgattctctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 13584391 - 13584252
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| |||||||||| | ||||||||||| ||| |||  ||||| || ||||||||||||||| | ||| |  ||||||  ||||||| |    
T  13584391 gttcgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctc 13584292  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||| ||| || ||| |||| |||| |||||||||    
T  13584291 ctcgaattagtcggttcttgaatcgaatactgagttttca 13584252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 23639758 - 23639821
Alignment:
Q  216 cgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| | ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 23645416 - 23645479
Alignment:
Q  216 cgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| | ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 12500196 - 12500059
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||| ||| ||||||   ||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||| |||||| | |||| | |    
T  12500196 ggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-c 12500098  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
     ||||||||| || ||| ||||| |||||||||||||||    
T  12500097 tctcggattagtcaattcttggaccggataccgagtttt 12500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 52494623 - 52494685
Alignment:
Q  217 gcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| ||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 7392101 - 7391963
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| |||||  |||||| ||||||| |||||| || ||||||| ||| |||||  | || ||||||| ||||| |||    
T  7392101 ggttcgattccctatggtgccaatttcggtggt-taagtccatacagagtttgctctggctttaaatgggacccccata-gtgggcggtgggattgttcc 7392004  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| || || ||| ||||||||||||||||    
T  7392003 cctcggattagtcggttcttcgattggataccgagttttca 7391963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 9978585 - 9978509
Alignment:
Q  203 taaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||| ||||||||||| ||||||| |||||||||| |||||||| | |||| || ||||||||||||||||||    
T  9978585 taaatgggtcccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 22488146 - 22488026
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||||| ||||||| ||| |||  ||| | || ||||||||||||||||||||| | ||||||| ||||| |||||||  |||| ||| |  ||    
T  22488146 caatttcggtggactaagtccatatagagcttgttctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtcctt 22488047  T
Q  261 ggatcggataccgagttttca 281  Q
    |||||||||||| ||||||||    
T  22488046 ggatcggataccaagttttca 22488026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 30879303 - 30879164
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||| ||| |||||| | |||| ||| || ||||| | |||||| || ||||||| |||| ||  |||||| | ||||| ||||||| |    
T  30879303 ggtttgattccctctggtgccaatttcgatgggttaaatccatacaaagtttgctctggctttaaagggggtcct-gcaagtggacggtgggattggttc 30879205  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||||||||||| ||||||| |||||||| ||||||    
T  30879204 cctcagattaatcgattcttggatcagataccgaattttca 30879164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 13771619 - 13771482
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa--tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||  ||||||| | ||||||||||||| |||| |||  | |||| || ||||||||||||| ||||||||| |  | ||||||||||||    
T  13771619 ttcgattccctctgatgtcaatctcggtgggctaagtccatac-gaagctatgctctggctttaaacggggctcccgcaagtggatgatgagattggtcc 13771521  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||   |||| ||| || |||||||||||||||| ||||    
T  13771520 cctataattagtcggttcttggatcggataccgaatttt 13771482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 38740909 - 38741011
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaattt-gctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| |||||||||| ||||| | | ||| ||||||||||| |||||||||| ||||||  | ||||||||  ||||||| ||||||||    
T  38740909 ggttcgattccctctggtgtcaatttcggtggac-aggtctatacagaattttgctttgacttaaaacggacctcccgcaagcaggcggtgggattggtc 38741007  T
Q  240 ccct 243  Q
    ||||    
T  38741008 ccct 38741011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 43719155 - 43719085
Alignment:
Q  211 gcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| |||| ||||||| ||||||||  ||||||||| |||||| |||||||||||||||| ||||||    
T  43719155 gcccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttca 43719085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 55158409 - 55158343
Alignment:
Q  213 ccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| | || |||| ||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  55158409 ccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 13873433 - 13873316
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||| ||||||||  ||||||| |||||| |  ||| |||| |||||||||||||| || ||||  |||| |||    
T  13873433 ggttcgattccctctggtgccaatttcggtaggctaagttcatacagagtttgctctagcttcaaacagggcccccgcaagtgggtggtggaattgatcc 13873334  T
Q  241 cctcggattaatcgatta 258  Q
     || |||||| |||||||    
T  13873333 tctgggattagtcgatta 13873316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 17637912 - 17637852
Alignment:
Q  218 caagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||||||| |||||||||||||||||| |||||| || ||||||||||||||||||    
T  17637912 caagtgggcggtgatattggtcccctcggattagtcgattctt-gatcggataccgagtttt 17637852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 278
Target Start/End: Complemental strand, 25969638 - 25969504
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| ||||||| || ||| |||||| ||||| | ||||| |||||||| ||||| || |||||||| ||||||||| ||||  |||||| ||||||| |    
T  25969638 ggttggattccccctggtgccaatttcggtggcc-aagtccatacagaacttgctctggctttaaac-gggcccccgtaagtgagcggtgggattggt-c 25969542  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||| |||| |||||| ||| ||||||||| ||||||    
T  25969541 cctcgaattagtcgattcttgaatcggatactgagttt 25969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 33289198 - 33289251
Alignment:
Q  226 cggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||| |||||    
T  33289198 cggtgagattagtcccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 278
Target Start/End: Complemental strand, 20527166 - 20527035
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcg 245  Q
    |||||||||| | | |||||| ||||||||||||| ||| |||  ||| |||   ||||||| ||||||| | |||| ||||||  |||||||| |||||    
T  20527166 gattccctctggcgccaatttcggtgggctaagtccatatagagcttgatttcggtttaaacagggcccc-gtaagtgggcggtaggattggtctcctcg 20527068  T
Q  246 gattaatcgattattggatcggataccgagttt 278  Q
    ||||| |||||| |||||||  |||||||||||    
T  20527067 gattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 23131497 - 23131434
Alignment:
Q  218 caagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||||  |||||||||||||| |||| |||||| || ||||||||||||||||||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttca 23131434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 46759170 - 46759107
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgag 275  Q
    ||||||||| | | ||||||||||||| |||||||||||||||||  || ||||||||||||||    
T  46759170 cccccgcaaatagacggtgagattggttccctcggattaatcgatctttagatcggataccgag 46759107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 1985895 - 1986031
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | |||  ||||| | ||||||||||| ||||||| |   || || |||||||||| |||||| ||||| |||||||  |||||| |    
T  1985895 ggttcgattccctttggtgcgaatttcgatgggctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggaattggt-c 1985993  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
      |||||||| |||||| |||||| ||||||||||||||    
T  1985994 tatcggattagtcgattcttggat-ggataccgagtttt 1986031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 4585799 - 4585711
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| ||||||||||| ||||||||||| ||||||| |||||||||  |||||||| |||||| || ||| ||| ||||| ||||||    
T  4585799 ttgctttggctttaaacggg-cccccgcaagtgggcggtg-gattggtcctttcggattagtcgattcttagattggacaccgatttttca 4585711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 43352391 - 43352337
Alignment:
Q  227 ggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||| |||| |||||||||||| ||| ||| |||||||||||||||    
T  43352391 ggtgagattggtctcctcagattaatcgattcttgaatcagataccgagttttca 43352337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 9646286 - 9646217
Alignment:
Q  209 gggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||| |||||||| ||| ||| ||||| ||||||||||||| ||| | |||||||||| ||||||||||    
T  9646286 gggccaccgcaagtgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 9693507 - 9693471
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9693507 ggttcgattccctctagtgtcaatttgggtgggctaa 9693471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 13017836 - 13017911
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| ||||||||||| ||| ||| ||||||||| ||||||||| ||| |  ||||||| |||||||||||||||    
T  13017836 aacgggacccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagttttca 13017911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 29875893 - 29875825
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggt 229  Q
    |||||| ||||||||||||| |||||||  ||| | |||||||||| ||  ||||||||||||||||||    
T  29875893 caatttcggtgggctaagtccatacagagcttgttctgactttaaatggaacccccgcaagttggcggt 29875825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 8030212 - 8030177
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaa 177  Q
    ||||||||||||||||||||||||| ||||||||||    
T  8030212 gttcgattccctctagtgtcaatttgggtgggctaa 8030177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 22625140 - 22625097
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccct 243  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  22625140 ctttaaatggggcccccgcaagtgggcggtgggattggtcccct 22625097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 13781133 - 13781183
Alignment:
Q  229 tgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| ||| ||||    
T  13781133 tgagattggtcccctcgaattaatcgattcttgaatcggatatcgaatttt 13781183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 3391499 - 3391446
Alignment:
Q  226 cggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||||||||||||| |||| ||| | |||| ||| |||||||||||||    
T  3391499 cggtgagattggtcccctcgaattagtcggtcattgaatcagataccgagtttt 3391446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 21175719 - 21175658
Alignment:
Q  216 cgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtt 277  Q
    ||||||| |||||||  |||||| ||||  |||||| |||| ||||||||||||||||||||    
T  21175719 cgcaagtaggcggtggaattggttcccttagattaaacgatcattggatcggataccgagtt 21175658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 23985823 - 23985786
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  23985823 ctaaccaagctactaactctagtttacctatcaactaa 23985786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 28791174 - 28791313
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||| ||| ||||| |||||||||| |||||| |||||| ||||| || |||||| || ||||||||||| | ||  ||||| |||||||||||||||     
T  28791174 ggttccattacctctggtgtcaatttcggtggg-taagtctatacaaaactttgctctggctttaaacgggtctcca-caagtgggcggtgagattggtt 28791271  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |  ||| |||| ||| |  ||| |||||||| ||||||||||    
T  28791272 ctttcgaattagtcggtccttgaatcggatatcgagttttca 28791313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 37302623 - 37302684
Alignment:
Q  218 caagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| || |||||||||| |||||||| |||||| ||| |||||||||||| ||||    
T  37302623 caagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 42508463 - 42508382
Alignment:
Q  197 tgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||||| ||| ||||| ||||| ||||||   ||||||||||||| |||| ||| ||||| |||  ||||||||||||    
T  42508463 tgactttaaatgggccccccacaagtgggcggttgaattggtcccctcgaattagtcggttattagattagataccgagttt 42508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 43719209 - 43719156
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacaga 188  Q
    ||||| |||||||||| ||||||||  ||||| ||||||||||||| |||||||    
T  43719209 gtttcaggttcgattctctctagtgctaatttcggtgggctaagtccatacaga 43719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 52545283 - 52545320
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  52545283 ctaaccaagctactaactctagtttacctatcaactaa 52545320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 654284 - 654146
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||| ||||||||| ||||||| |||||||||    
T  654284 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 654185  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  654184 cctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 15360236 - 15360096
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||| | ||||||| |||||||||    
T  15360236 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 15360137  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  15360136 cctcggattagtcgattcttggatcggataccgagttttca 15360096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 34147405 - 34147545
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  34147405 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 34147504  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  34147505 cctcggattagtcgattcttggatcggataccgagttttca 34147545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 34160021 - 34160161
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  34160021 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 34160120  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  34160121 cctcggattagtcgattcttggatcggataccgagttttca 34160161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 28672126 - 28672264
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||  ||| |||| ||||||||||| ||| ||||||| ||||||| |||||||||    
T  28672126 ggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcc 28672225  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| ||||||| |||||||||||||    
T  28672226 cctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 3222773 - 3222634
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||||||||| |||||| ||||||| |||||||||    
T  3222773 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaaacggggcccc-gcaagtgggcggtgggattggtcc 3222675  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  3222674 cctcggattagtcgattcttggatcggataccgagttttca 3222634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 21148647 - 21148509
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||||||| |||||| | ||||||||||| |||||||  ||||| ||||||||||||||||||| |||||| ||||||| ||||||||||    
T  21148647 gttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgactttaaacggggcccc-gcaagtgggcggtgggattggtccc 21148549  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||| |||||| ||| |||||||||||||||||||    
T  21148548 ctcggattagtcgattcttgaatcggataccgagttttca 21148509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 9239034 - 9239171
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| |||||| |||||| ||| |||  |||||||| ||||||| ||||||||||||||| ||||||| |||||||||    
T  9239034 ggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtcc 9239133  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  9239134 cctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 11448930 - 11449068
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  11448930 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 11449029  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| ||| |||||||| ||||||||    
T  11449030 cctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 9843997 - 9844137
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||| | ||||| ||||||||||||||||| |||||| |||||||  ||| | || ||||||||||||||||| ||||| |||||||||||||||||    
T  9843997 ggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagcttgttctggctttaaacggggccccctcaagtgggcggtgagattggtcc 9844096  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    | |||||||| |||||| |||||||||||| ||||||||||    
T  9844097 cttcggattagtcgattcttggatcggatatcgagttttca 9844137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 5360209 - 5360071
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||| || |||||| ||||||||||||| |||||||  ||||| |||||||||||||  ||||| ||||| ||||||| |||||||||    
T  5360209 ggttcgattccctctaatgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggaacccccacaagtgggcggtgggattggtcc 5360110  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| || ||||||||||||||||||    
T  5360109 cctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 9690776 - 9690638
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| | |||||||||||||| ||||||||||||| |||||||  ||||| || ||||||||||||||| | ||||| | ||||| |||||||||    
T  9690776 ggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccctcacaagtggacggtgggattggtcc 9690677  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
     ||||||||| |||||| |||||||||||||||||||||    
T  9690676 tctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 12390484 - 12390621
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||| |||||||||||||| ||||||| |||||||||    
T  12390484 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 12390583  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||||    |||||||||||||||||||    
T  12390584 cctcggattagtcgatta---aatcggataccgagttttca 12390621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 1344994 - 1345134
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| ||||||  |||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||| | ||||| |||||||||    
T  1344994 ggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgggccccccgcaagtggacggtgggattggtcc 1345093  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||||| |||||| |||||||||||||||||||||||    
T  1345094 ccttggattagtcgattcttggatcggataccgagttttca 1345134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 21982458 - 21982319
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||  | ||| ||||||  |||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| ||||||| |    
T  21982458 ggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-c 21982360  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  21982359 cctcggattagtcgattcttggatcggataccgagttttca 21982319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 17081187 - 17081052
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcg 245  Q
    |||||||||| |||||||||| ||||||||||||| |||||||  ||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  17081187 gattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcg 17081088  T
Q  246 gattaatcgattattggatcggataccgagttttca 281  Q
     || | | | || |||||||| ||||||||||||||    
T  17081087 aataagttgtttcttggatcgaataccgagttttca 17081052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 11007224 - 11007364
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| ||||  | ||||||| ||||||||||||| ||||| |  ||||| |  |||||| |||||||||||||||| ||||||| |||||| ||    
T  11007224 ggttcgattcactctgctctcaatttcggtgggctaagtccatacaaagcttgctctagctttaagcggggcccccgcaagtgggcggtgggattggccc 11007323  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||||||||| ||||||||    
T  11007324 cctcggattagtcgattctttgatcggatacctagttttca 11007364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 11840963 - 11841097
Alignment:
Q  144 tcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccct 243  Q
    |||||||||||| ||| |||||| |||||| |||||| ||||| |  ||||||||  |||||||||||||||   |||| | ||||| |||| |||||||    
T  11840963 tcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaaacggggccccat-aagtggacggtgggattagtcccct 11841061  T
Q  244 cggattaatcgattattggatcggataccgagtttt 279  Q
    || |||| ||||||||||||||||||||||||||||    
T  11841062 cgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 14213000 - 14213081
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||| |||||||||| || |||| ||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  14213000 ctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttca 14213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 9208311 - 9208449
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaat-ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||| || ||| |||||| ||||||| ||||| |||||||   |||||||| ||||||| ||||||||||||||| ||||||| ||||||||    
T  9208311 ggttcgattccccctggtgccaatttcggtgggc-aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtc 9208409  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
     |||| || || |||||| |||||||  ||||||||||||    
T  9208410 tcctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 33499539 - 33499672
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctc 244  Q
    |||||||||| |||||||||| ||||||||| ||| ||||| |  ||||||||| ||||||| ||| || || ||||| ||||||| |||||||||||||    
T  33499539 gattccctctggtgtcaatttcggtgggcta-gtccatacaaatctttgctttggctttaaatgggccctccacaagtgggcggtgggattggtcccctc 33499637  T
Q  245 ggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| ||  ||  |||| |||||||||||||||    
T  33499638 ggattagtcagttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 277
Target Start/End: Complemental strand, 17149594 - 17149458
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaat-ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| |||  ||||| ||| ||| ||||| |||||||   |||||||| ||||||| |||||||||||||||   ||||| ||||||||    
T  17149594 ggttcgattccctctggtgctaatttcggttggc-aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattggtc 17149496  T
Q  240 ccctcggattaatcgattattggatcggataccgagtt 277  Q
    |||||| |||| ||| |  ||| ||| |||||||||||    
T  17149495 ccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 17706410 - 17706317
Alignment:
Q  188 aatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| || |||||||| |||||| ||||||| | ||||| |||||||  |||||||| | || ||| |||||||||||||||| ||||||    
T  17706410 aatttgctctggctttaaactgggccctcgcaagtggacggtgtgattggtttcctcggataagtcaattcttggatcggataccgaattttca 17706317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 33718547 - 33718478
Alignment:
Q  201 tttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggata 270  Q
    ||||||||||||| | |||||| | ||||| ||||| ||||||||||||| |||||| ||||||||||||    
T  33718547 tttaaacggggcctctgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 28968178 - 28968078
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    |||||||| |||||| |||||||| |||||| |||||| |||||||| || || || |||||||||| ||||  | || | ||||||| |||||||||||    
T  28968178 ttcgattctctctagcgtcaatttcggtgggttaagtccatacagaacttactctgcctttaaacggtgcccatgtaaataggcggtgggattggtcccc 28968079  T
Q  243 t 243  Q
    |    
T  28968078 t 28968078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 10377774 - 10377911
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccg-caagttggcggtgagattggt 238  Q
    ||||| ||||||| | ||| |||||| ||||||| ||||| ||||| |  |||||| |||||| |||||||||||||  ||||| |||||||  ||||||    
T  10377774 ggttcaattccctatggtgccaatttcggtgggc-aagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtggcattggt 10377872  T
Q  239 cccctcggattaatcgattattggatcggataccgagtt 277  Q
    ||||||||| || ||| |  |||||| ||||||||||||    
T  10377873 cccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 12591696 - 12591766
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacgggg 211  Q
    ||||||||||||||| ||| ||||||  |||||||||||| |||||||  ||||| || ||||||||||||    
T  12591696 ggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgggg 12591766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 14504160 - 14504082
Alignment:
Q  201 tttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||| |||||||||| ||||||| ||||| ||| |||| |||| |||||  ||| |||||||||||||||||    
T  14504160 tttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 20213108 - 20213144
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20213108 ggttcgattccctctagtgtcaatttgggtgggctaa 20213144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 22107131 - 22107167
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22107131 ggttcgattccctctagtgtcaatttgggtgggctaa 22107167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 21903699 - 21903617
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccc-tcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| ||||| || |||||| ||||||| || |||||||| || ||||| |||||| ||||||||||| | |||||||||    
T  21903699 ctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggatgcagagttttca 21903617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 31039084 - 31039177
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| ||||||| | ||||||||||| ||||||| |||||| || || | ||  || ||||| ||||| ||||||| |||||||||    
T  31039084 gattccctctagtatcaatttcgatgggctaagtccatacagagtttgctatggctatgaa-tggacccccacaagtgggcggtgtgattggtcc 31039177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 33866148 - 33866111
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  33866148 ctaaccaagctactaactctagtttacctatcaactaa 33866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 33869295 - 33869258
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  33869295 ctaaccaagctactaactctagtttacctatcaactaa 33869258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 4391489 - 4391553
Alignment:
Q  217 gcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||| |||||||   ||| |||||| | ||||||||||||||| |||| ||||||||||||||    
T  4391489 gcaagtgggcggtggacttgatccccttgtattaatcgattattgaatcgaataccgagttttca 4391553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 5220 - 5080
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||| | ||||||| |||||||||    
T  5220 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 5121  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  5120 cctcggattagtcgattcttggatcggataccgagttttca 5080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 8e-43; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 44946191 - 44946051
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  44946191 ggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 44946092  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  44946091 cctcggattagtcgattcttggatcggataccgagttttca 44946051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 15038018 - 15038158
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||||||||||| |||||||  |||||||| |||||||||| |||||||||||| ||||||| |||||||||    
T  15038018 ggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaagtgggcggtgggattggtcc 15038117  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| ||||| |||||| |||||||||||||||||||||||    
T  15038118 cctcagattagtcgattcttggatcggataccgagttttca 15038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 35171859 - 35171999
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |   |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  35171859 ggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 35171958  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  35171959 cctcggattagtcgattcttgaatcggataccgagttttca 35171999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 36242450 - 36242310
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||||||||||||| |  ||||  ||||| || |||||||||||| |||||||||| ||||||| |||||||||    
T  36242450 ggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc 36242351  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||||||| |||||||||||||| | ||||||    
T  36242350 cctcggattaatcgattcttggatcggataccaaattttca 36242310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 11941348 - 11941210
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||| ||||||| | ||| ||||||||||||| |||||| |||||||  ||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  11941348 ggttcaattccctatggtgccaattttggtgggttaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcc 11941249  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  11941248 cctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 28668952 - 28669072
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||||| ||||||| |||||||  |||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||| ||    
T  28668952 caatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattttt 28669051  T
Q  261 ggatcggataccgagttttca 281  Q
    |||||||||||||||||||||    
T  28669052 ggatcggataccgagttttca 28669072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 33827711 - 33827571
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| | ||||||||||| |||||||  ||||| || ||||||||||| |||| |||||| ||||||| |||||||||    
T  33827711 ggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacgggacccctgcaagtgggcggtgggattggtcc 33827612  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||||| |||||| |||||||||||||||||||||||    
T  33827611 ccttggattagtcgattcttggatcggataccgagttttca 33827571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 135 - 281
Target Start/End: Original strand, 24196057 - 24196201
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagat 234  Q
    ||||| ||||||||||||||| |||  ||||| ||||||||||||| |||||||| ||||| || |||||||||||  |||||||||| ||||||| |||    
T  24196057 gtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggctttaaacggg--ccccgcaagtgggcggtgggat 24196154  T
Q  235 tggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||||| |||||| || ||| ||||||||||||||||    
T  24196155 tggtcccctcggattagtcgattttttgattggataccgagttttca 24196201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 41314051 - 41314190
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||  ||||| ||||||||||| |||  ||||||||| | ||||| |||||||||    
T  41314051 ggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaaac-gggatcccgcaagtggacggtgggattggtcc 41314149  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| |||||||||||| || ||||||||||| ||||||||    
T  41314150 cctcagattaatcgattcttcgatcggataccaagttttca 41314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 30466968 - 30466830
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| ||||  || |||||| ||||||||||||| |||||||  ||||| || |||||||| |||||||||||||| ||| ||| |||||||||    
T  30466968 ggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcc 30466869  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    | |||||||| |||||| |||||||||||||||||||||    
T  30466868 cttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 2140621 - 2140484
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc-gcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| |||||||||| |||||    |||| |||||||  ||||| || ||||||| ||| ||||| |||||| ||||||| ||||||||    
T  2140621 ggttcgattccctctggtgtcaatttcggtgg----agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggcggtgggattggtc 2140526  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  2140525 ccctcggattagtcgattattggatcggataccgagttttca 2140484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 5394076 - 5394216
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||||||||| | ||||||||||| ||||||| |||||| |||||||||| |||||| |||||||| ||||||| |||||||||    
T  5394076 ggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtcc 5394175  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
      |||||||| ||| |  || ||||||||||||| ||||||    
T  5394176 gttcggattagtcggtccttagatcggataccgaattttca 5394216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 19849893 - 19850029
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||| | |||||||||||||| ||| ||||||| |||||||  ||||| || |||||||| |||||||||||||| |||||||||||||||||     
T  19849893 gttcgattccttttagtgtcaattttgatggactaagtctatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgagattggtcct 19849992  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||  ||||||||||| ||||||| ||||| |||||||    
T  19849993 ctcaaattaatcgattcttggatc-gatactgagtttt 19850029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 44976292 - 44976175
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggc-ccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||| || ||||||||||||| |||||||||| ||||||| ||||| ||    
T  44976292 ggttcgattccctctggtgccaattttggtgggctaagtccatacagagtttgctctggctttaaacggggctccccgcaagtgggcggtgggattgatc 44976193  T
Q  240 ccctcggattaatcgatt 257  Q
    || |||||||| ||||||    
T  44976192 ccttcggattagtcgatt 44976175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 41329904 - 41330039
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||| |||  ||||| || ||||||| ||||||||| ||||| |||||||||||||||||||    
T  41329904 ttcgattccctctggtgccaattttggcgggctaagtccata-agagcttgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccc 41330002  T
Q  243 tcggattaatcgattattggatcggataccgagtttt 279  Q
    || ||||| ||| || ||||| |||||||||||||||    
T  41330003 tcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 3943801 - 3943939
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    |||||||  |||| ||| |||||| ||| ||||||||| |||||||  ||||| || ||||||||||||| ||||||||| || |||| |||||||||||    
T  3943801 ttcgattttctctggtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattggtcccc 3943900  T
Q  243 tcggattaatcgattattggatcggataccgagttttca 281  Q
    | |||||| ||| ||||||||||||||||| ||||||||    
T  3943901 ttggattagtcggttattggatcggataccaagttttca 3943939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 8258956 - 8259096
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||   | ||||||||||||| |||||| |||||||  ||| | || |||||| |||||||||||||||| ||||||| |||| || |    
T  8258956 ggttcgattccctctgacgccaattttggtgggttaagtccatacagatcttgttctggctttaatcggggcccccgcaagtaggcggtgggattagttc 8259055  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    | |||||||| |||||| ||||||||||||| |||||||||    
T  8259056 cttcggattagtcgattcttggatcggatactgagttttca 8259096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 34516530 - 34516412
Alignment:
Q  162 aattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattg 261  Q
    ||||| ||||||||||||| |||||||  ||||| |  ||||||||||| |||| |||||| ||||||| ||||||||||||||||||| |||||| |||    
T  34516530 aatttcggtgggctaagtccatacagagcttgctctcgctttaaacggg-cccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T
Q  262 gatcggataccgagttttca 281  Q
    ||||||||||| ||||||||    
T  34516431 gatcggataccaagttttca 34516412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 27269466 - 27269344
Alignment:
Q  157 gtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgat 256  Q
    |||||||||| ||||||||||||| ||| |||| ||||| || |||||||| |  | ||||||||| ||||||| ||||| ||||||||||||| |||||    
T  27269466 gtgtcaatttcggtgggctaagtccatatagaacttgctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcgat 27269367  T
Q  257 tattggatcggataccgagtttt 279  Q
    | |||||| ||||||||||||||    
T  27269366 tcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 19054084 - 19054225
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccc-cgcaagttggcggtgagattggtc 239  Q
    |||| |||||| ||| |||| || || ||||||||||||| |||||||  |||||||| ||||||| ||  |||| ||||||| ||||||| ||||||||    
T  19054084 ggtttgattccttctggtgttaacttcggtgggctaagtccatacagagcttgctttggctttaaatggaaccccccgcaagtgggcggtgggattggtc 19054183  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    | ||||||||| |||||| ||||||| |||||||||||||||    
T  19054184 cgctcggattagtcgattcttggatcagataccgagttttca 19054225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 43374463 - 43374328
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||  ||||| |  ||||| || ||||||     ||||||||||||  |||||| |||||||||    
T  43374463 ggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctggctttaa-----gcccccgcaagtgagcggtgggattggtcc 43374369  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    | |||||||| |||||| |||||||||||||||||||||||    
T  43374368 cttcggattagtcgattcttggatcggataccgagttttca 43374328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 714243 - 714125
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattatt 260  Q
    |||||| ||||||||||||| ||| ||| |||||| ||||||||||||| |||||||||| | ||||||| | || |||||||| ||||| |||||| ||    
T  714243 caatttcggtgggctaagtccatagagagtttgctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattctt 714144  T
Q  261 ggatcggataccgagtttt 279  Q
     ||| ||||||||||||||    
T  714143 agattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 25293225 - 25293356
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccc-cgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||| ||||||||||||  |||        ||| || |||||||||||||||| ||||||| |||| || ||||||||    
T  25293225 ggttcgattccctctggtgccaatttcggtgggctaagttcata--------gctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 25293316  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  25293317 ccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 36390706 - 36390569
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| ||| |||||| ||||| ||||||| ||||| |  ||||| |||||||||| ||| ||||||||||| ||||||| ||||||| |    
T  36390706 ggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggacccccgcaagtgggcggtgggattggt-c 36390608  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| | |||||  ||| |||||||||||||||||    
T  36390607 cctcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 17324825 - 17324961
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||  |||||||| ||||| ||||||| |||| ||||    
T  17324825 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaa-tgggcccccacaagtgggcggtgggattagtcc 17324923  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||  |||| |||||| || ||||||||| ||||||||    
T  17324924 cctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 1191572 - 1191712
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||| |||||||||||  |||||| ||||||||||||| ||||||| |||||| || |||||||||| | ||||| ||||   |||||  |||| |||    
T  1191572 ggttcgtttccctctagtaccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggtgtccccgaaagtgaacggtggaattgttcc 1191671  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| ||||| || ||||||| ||||||    
T  1191672 cctcgaattagtcgattcttggaccgaataccgaattttca 1191712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 5608170 - 5608038
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    |||||||| |||| |||||||||||||||||||||||| ||| |||  ||||| ||||||||||||| || ||| ||| | | ||| | ||||| ||||     
T  5608170 ttcgattctctctggtgtcaattttggtgggctaagtccatatagagcttgctctgactttaaacggagctcccacaaatggtcggcgggattgatccct 5608071  T
Q  243 tcggattaatcgattattggatcggataccgag 275  Q
    || ||| | |||||||||| |||||||||||||    
T  5608070 tcagatgagtcgattattgaatcggataccgag 5608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 10582128 - 10581995
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| |  |||||||| |||||| ||||||| ||| ||| |||||||||    
T  10582128 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctagctttaaac-gggccctcgcaagtgggc-gtgggattggtcc 10582031  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||||    |||||||||||||||||    
T  10582030 cctcgaattagtcgatta---aatcggataccgagtttt 10581995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 14486948 - 14487024
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||| ||| |  |||||||||||||||||||||||    
T  14486948 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttca 14487024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 13266550 - 13266686
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    ||||||||| |||| ||| |||||  ||||| ||||||| |||||||  ||||| || |||||||||||| |||||||||| ||   || ||||||||||    
T  13266550 gttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggctttaaacgggg-ccccgcaagtgggtaatgggattggtccc 13266648  T
Q  242 ctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||  |||| |||||| |||||||||||| ||||||||    
T  13266649 ctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 18692090 - 18692159
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||| ||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttca 18692159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 44929923 - 44929846
Alignment:
Q  202 ttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||| ||||||||||| | ||||| |||||||||||| | |||| |||||| |||||||||||||||||||||    
T  44929923 ttaaacgggacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 31778140 - 31778228
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| || ||||||| ||||||||||||||| | ||||||||||||||| ||| ||||| ||  || |||||||||||||||||||||    
T  31778140 ttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 45132405 - 45132477
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggatacc 272  Q
    ||||||||||||||||| ||||| ||| ||  ||||||||| |||||||||||||||| ||||||||||||||    
T  45132405 ctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 4567575 - 4567427
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcg--------gtgag 232  Q
    ||||||||| ||||| ||| |||||| |||||||||| || |||||||  ||| | || ||||||||||||||||| ||||| ||||        ||| |    
T  4567575 ggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagcttgttctggctttaaacggggcccccacaagtgggcggtgggattgtggg 4567476  T
Q  233 attggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| ||||||||| || ||| |||||||||||||| ||||||||    
T  4567475 attggtcctctcggattagtcaattcttggatcggatacccagttttca 4567427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 6714374 - 6714295
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| | ||||||||| | |||||||||||||||||||  |||| |||||| |||||| ||||||||||||||    
T  6714374 ctttaaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 18976521 - 18976454
Alignment:
Q  213 ccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttc 280  Q
    |||||||||| ||||||| |||||||||||||| |||| |||||| |||||||||||||||| |||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 4852649 - 4852726
Alignment:
Q  201 tttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||||| |||||| | |||||  ||||||||||||||||||||||||| ||||||||||| || ||||||    
T  4852649 tttaaacggggcccc-gcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 45271444 - 45271574
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| ||| ||||||  |||||||||||| |||||||  ||||| || |||||||||  ||||| ||||||  |||| ||||||| ||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgaagcccctgcaagtgagcggagagattgatccc 45271543  T
Q  242 ctcggattaatcgattattggatcggatacc 272  Q
    |||  |||| |||||| || ||| |||||||    
T  45271544 ctcaaattagtcgattctttgattggatacc 45271574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 27290647 - 27290773
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||   ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||| |||||||||||              ||||    
T  27290647 ggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagt--------------gtcc 27290732  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  27290733 cctcggattagtcgattcttggatcggataccgagttttca 27290773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 28194212 - 28194136
Alignment:
Q  205 aacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||||||| ||||||| |||||||| | || ||||| ||| |  |||||||||||||||||||||||    
T  28194212 aacggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttttca 28194136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 4769259 - 4769354
Alignment:
Q  175 taagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggata 270  Q
    |||||| |||||||  ||||| || |||||||||||| |||||||||| | ||||||| |||||||||||  |||| |||||| || |||||||||    
T  4769259 taagtccatacagagcttgctctggctttaaacgggggccccgcaagtggacggtgaggttggtcccctcaaattagtcgattcttagatcggata 4769354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 44610157 - 44610236
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| |||||||| |||||| ||||||| |||||||||| |||||||| ||| || ||||| || ||||||||||||    
T  44610157 ctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 39957891 - 39957957
Alignment:
Q  215 ccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||| |||| || ||||||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttca 39957957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 8192415 - 8192350
Alignment:
Q  216 cgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||| ||||||| |||||| |||||||||||| ||| |  |||||||||||||||||||||||    
T  8192415 cgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttca 8192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 13089012 - 13089077
Alignment:
Q  214 cccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||| || |||| ||||||||||||||||    
T  13089012 cccgcaagtgggcggtgagattggtcctctcagattattcggtttttgggtcggataccgagtttt 13089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 9401040 - 9400961
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| |||||||||||||| ||| ||| |||||||  |||  ||||| |||||| ||||||||||||| |||||||    
T  9401040 ctttaaacagggcccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagtttt 9400961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 12360350 - 12360296
Alignment:
Q  225 gcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||||| |||||||||| |||||  |||||||||||||||| ||||    
T  12360350 gcggtgagattggtctcctcggattagtcgatctttggatcggataccgaatttt 12360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 1501510 - 1501462
Alignment:
Q  232 gattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  1501510 gattggtcccctcggattagtcgattctt-gatcggataccgagttttca 1501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 19525534 - 19525429
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctt-tgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||||||||||| ||||| |||||     ||||  || ||||||| | ||||||||||||| || |||||||||||||    
T  19525534 ggttcgattccctctggtgccaattttggtgggc-aagtccatacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagattggtc 19525440  T
Q  240 ccctcggatta 250  Q
    |||| ||||||    
T  19525439 cccttggatta 19525429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16381847 - 16381787
Alignment:
Q  8 ctatatggaatcattcctcagatttgcttcttgaaaggaatttctgtatttccaaaggtaa 68  Q
    |||||||||||  |||||||  ||||||||||| |||||||  ||||||||||||||||||    
T  16381847 ctatatggaattgttcctcaactttgcttcttgcaaggaatacctgtatttccaaaggtaa 16381787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 11147227 - 11147266
Alignment:
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  11147227 ctcggattaatcgattttttgatcggataccgagttttca 11147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 19174904 - 19174959
Alignment:
Q  224 ggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| ||||| ||||||||||||||||| |  |||||||||||||||| ||||    
T  19174904 ggcggtgggattgatcccctcggattaatcggtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 19605983 - 19605846
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaat-ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||||||| ||  ||||| ||||||| ||||| ||||||| | ||||| | ||||  || |||| |||  ||||| ||||||||||||||||    
T  19605983 ggttcgattccctctaatgctaatttcggtgggc-aagtccatacagagtcttgctctcacttagaaagggggccca-caagtgggcggtgagattggtc 19605886  T
Q  240 ccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| |||| | ||   |||||||||||| ||||||||    
T  19605885 ccctcgaattagttgacacttggatcggatatcgagtttt 19605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 29361667 - 29361745
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| ||||| |||||| ||| ||| ||||| || |||||||||||| ||||  ||||||||||| ||||||||    
T  29361667 ctttaaacggagcccc-gcaagtgggcagtgggattgatctcctcggattaattgattcctggatcggatatcgagtttt 29361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 32845143 - 32845194
Alignment:
Q  134 agtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatac 185  Q
    |||||| ||||||||||||||| ||| |||||| ||||||||||||| ||||    
T  32845143 agtttcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 32845194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 19517001 - 19517071
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacgggg 211  Q
    ||||||||| ||| |  ||| ||||||| ||||||||||| |||||||  |||||||| ||||||||||||    
T  19517001 ggttcgatttcctatgctgttaattttgatgggctaagtccatacagagcttgctttggctttaaacgggg 19517071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 13599413 - 13599325
Alignment:
Q  190 tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| ||||||  ||||||||||| |||||| | ||||||||||| |||||||  |||| | | | ||||||||||||||||| ||||    
T  13599413 tttgctctgacttagaacggggcccc-gcaagtggacggtgagattgatcccctcatattagtgggtcattggatcggataccgaatttt 13599325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 1845095 - 1845047
Alignment:
Q  233 attggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||  |||| |||||| |||| ||||||||||||||||||    
T  1845095 attggtcccctcaaattagtcgattcttggctcggataccgagttttca 1845047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 21195685 - 21195649
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| | ||||||||    
T  21195685 ggttcgattccctctagtgtcaatttggatgggctaa 21195649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 39765000 - 39765036
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| | ||||||||    
T  39765000 ggttcgattccctctagtgtcaatttagctgggctaa 39765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 40997487 - 40997419
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggg 210  Q
    |||| |||||| |||||  |||||| |||| | ||||||||||||||  ||||| ||||||||||||||    
T  40997487 gttcaattccccctagtaccaatttcggtgagataagtcaatacagagcttgctctgactttaaacggg 40997419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 8e-43; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 4621375 - 4621235
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||||| |||||||||| ||||||| |||||||||    
T  4621375 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc 4621276  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  4621275 cctcggattagtcgattcttggatcggataccgagttttca 4621235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 24122082 - 24122220
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||| ||||||||| ||||||| |||||||||    
T  24122082 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 24122181  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  24122182 cctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 17935828 - 17935965
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||| || ||||||||||||||||||||||| |||| || |||||||||    
T  17935828 ggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtcc 17935927  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
     ||||||||| |||||| ||||||||||||||||||||    
T  17935928 actcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 7766865 - 7766725
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| |||  ||||| ||||||||||||| |||||||  ||||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  7766865 ggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaagtgggcggtgggattggtcc 7766766  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||| |||||||| ||||||||||    
T  7766765 cctcggattagtcgattcttgaatcggatatcgagttttca 7766725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 15059540 - 15059400
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||||| |||||||||| |||||||||||||||||    
T  15059540 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgagattggtcc 15059441  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  15059440 cctcgaattagtcgattcttggatcggataccgagttttca 15059400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 24674452 - 24674590
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  24674452 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 24674551  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| |||||||||||||||| ||||    
T  24674552 cctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 8077706 - 8077841
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||| |||||||||||||| ||||||| |||||||||    
T  8077706 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 8077805  T
Q  241 cctcggattaatcgattattggatcggataccgagtt 277  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  8077806 cctc-gattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 7197384 - 7197247
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||||||||  || |||||| |||||| ||||||||||||||  ||||| || ||||||||| |||||| |||||| |||||||||||||||||    
T  7197384 ggttcgattccctctgatgccaatttcggtggg-taagtcaatacagaccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcc 7197286  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| ||||||  ||||||||||||||||||||    
T  7197285 cctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 142 - 275
Target Start/End: Original strand, 1378958 - 1379090
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||| ||||| |||||||||| ||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| | ||||||||||||||||    
T  1378958 gttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaaacggg-cccccgcaagtggacggtgagattggtccc 1379056  T
Q  242 ctcggattaatcgattattggatcggataccgag 275  Q
    ||| ||||| |||||| || ||||||||||||||    
T  1379057 ctcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 23734175 - 23734316
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacgggg-cccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||||||  || |||||| ||||||||||||| ||||||| |||||| || |||||||||||| ||||||||||| |||||||| |||||||    
T  23734175 ggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtc 23734274  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||| |||||| ||| |||||||||| ||||||||    
T  23734275 ccctcagattagtcgattcttgaatcggataccaagttttca 23734316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 23741367 - 23741508
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacgggg-cccccgcaagttggcggtgagattggtc 239  Q
    |||||||||||||||  || |||||| ||||||||||||| ||||||| |||||| || |||||||||||| ||||||||||| |||||||| |||||||    
T  23741367 ggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtc 23741466  T
Q  240 ccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||| |||||| ||| |||||||||| ||||||||    
T  23741467 ccctcagattagtcgattcttgaatcggataccaagttttca 23741508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 7578468 - 7578608
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||||||||||| ||||| |  ||||| |||||||||||||||||| ||||||| || |||| ||||||| |    
T  7578468 ggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgactttaaacggggccctcgcaagtgggtggtgggattggttc 7578567  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| | |||| |||||||||||||||||||||||    
T  7578568 cctcggattagttgatttttggatcggataccgagttttca 7578608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 8254890 - 8254750
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||  |||| |||||||||| ||||||||||||  |||||||| ||||| || ||||||||||||||||||||||| ||||||| ||||| |||    
T  8254890 ggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 8254791  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| | |||| |||||| ||| |||||||||||||||||||    
T  8254790 ccttgaattagtcgattcttgaatcggataccgagttttca 8254750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 9500493 - 9500355
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||||||  ||||| || |||||||||| |||||| ||||| ||||||||||||||||     
T  9500493 ggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggagcccccacaagtgggcggtgagattggtct 9500394  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    | |||||||| |||||| |||||||||||| ||||||||    
T  9500393 cttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 30677235 - 30677375
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||| ||| |||||| ||||||||||||| |||||||  |||||||| ||||||| ||| ||||||||||| ||||||| |||||||||    
T  30677235 ggtttgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggattggtcc 30677334  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||| ||||| ||| || ||||| |||||| ||||||||||    
T  30677335 cctcagattagtcggttcttggaccggatatcgagttttca 30677375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 46607869 - 46608009
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| |||||||||| ||  ||||||||||| ||||||| ||||| |||    
T  46607869 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcc 46607968  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| ||| |  |||||||||||| ||||||||||    
T  46607969 cctcggattagtcggtccttggatcggatatcgagttttca 46608009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 34778401 - 34778535
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||| ||  ||||||||||||| |   || ||||||| ||||||||| ||||||||||||||||||||||| | ||||| |||||||||    
T  34778401 ggtttgattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggctttaaacggggcccccgcaagtggacggtgggattggtcc 34778497  T
Q  241 cctcggattaatcgattattggatcggataccgagttt 278  Q
    ||| |||||| |||||| ||||||||||||||||||||    
T  34778498 ccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 45859181 - 45859043
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||    ||||| |  |||||||| |||||||||||||| || |||  |||||||||    
T  45859181 ggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcc 45859082  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| | ||||||||||||||||||||| ||||    
T  45859081 cctcggattagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 18646912 - 18647045
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||||||||| |||| ||| |||||| ||||||||||||| ||||| | |||||| || |||||||||| ||||| | |||| ||||||||||||| |||    
T  18646912 ggttcgattctctctggtgccaatttcggtgggctaagtctatacaaagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcc 18647011  T
Q  241 cctcggattaatcgattattggatcggataccga 274  Q
    ||||| |||| |||||| ||| ||||||||||||    
T  18647012 cctcgaattagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 271
Target Start/End: Complemental strand, 8779872 - 8779744
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||| | |||||||||||||| ||||||||||||| ||||| |  || || |  ||||||||||||||||| ||||| ||||||| |||||||||||    
T  8779872 ttcgatttcttctagtgtcaatttcggtgggctaagtccatacacagcttactctagctttaaacggggcccccacaagtaggcggtgggattggtcccc 8779773  T
Q  243 tcggattaatcgattattggatcggatac 271  Q
    |||||||| |||||| || ||||||||||    
T  8779772 tcggattagtcgattcttagatcggatac 8779744  T

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Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 33905648 - 33905508
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| || ||||||| |||||| |||||| ||||||| |||| | || |||||||||||||| ||| |||| | ||||| ||||| |||    
T  33905648 ggttcgattccctctggtatcaatttcggtgggttaagtccatacagagtttgttctggctttaaacggggcctccgtaagtggacggtgggattgatcc 33905549  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||  ||| ||||||| || ||||||||||||||||||||    
T  33905548 cctcaaatttatcgattctttgatcggataccgagttttca 33905508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 27455004 - 27454862
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccccc--gcaagttggcggtgagattggt 238  Q
    |||||||||| ||||  || |||||| |||| |||||||| |||||||  ||||| || ||||||||||| |||||  ||| || ||||||| |||||||    
T  27455004 ggttcgattcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgggccccccccgcatgtgggcggtgggattggt 27454905  T
Q  239 cccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||| |||||| |||||||||||||| ||||||||    
T  27454904 cccctcggattagtcgattcttggatcggatacctagttttca 27454862  T

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Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 45331740 - 45331621
Alignment:
Q  161 caattttggtgggctaagtcaatacagaatttgctttgactttaaacggggc-ccccgcaagttggcggtgagattggtcccctcggattaatcgattat 259  Q
    |||||| ||||||||||||| |||||||  |||||||| ||||||||||||| |||||||||| | ||||| ||||  ||||||| |||||||||||| |    
T  45331740 caatttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattct 45331641  T
Q  260 tggatcggataccgagtttt 279  Q
    || |||||||||||||||||    
T  45331640 tgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 36156026 - 36155888
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||| ||||| || ||||  |||||||   ||||||| ||||||||||| || ||||||| |||||||||    
T  36156026 ggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagcttgctttagttttaaacagggcccccgcaggtgggcggtgggattggtcc 36155927  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    | ||  |||| |||||| |||||||||||||||||||||    
T  36155926 cttcaaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 32729604 - 32729743
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| ||||||| ||||| |||||||  ||||| || ||||||| |||| |||||||||| ||||||| ||||| |||    
T  32729604 ggttcgattccctatggtgccaatttcggtgggc-aagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcc 32729702  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||| |||||| ||| |  |||||||||||||||||||||||    
T  32729703 ccttggattagtcggtctttggatcggataccgagttttca 32729743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 22909980 - 22910070
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| ||||||||||||| |||||||||||| ||||||| |||| |||||||||||||| |||||  || ||||||||||||||||||||    
T  22909980 ttgctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttca 22910070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 18533857 - 18533724
Alignment:
Q  146 gattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcg 245  Q
    ||||| |||||||| |||||| | ||| ||||||| ||| |||  ||| | ||||||||||||||||||| |||||| ||| ||| |||||||||||||     
T  18533857 gattctctctagtgccaatttcgatggactaagtccatatagagcttgttctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctca 18533758  T
Q  246 gattaatcgattattggatcggataccgagtttt 279  Q
     ||||||||||| || ||||||||||| ||||||    
T  18533757 tattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 40146024 - 40145889
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggccc-----ccgcaagttggcggtgagatt 235  Q
    ||||||||| ||||||||| ||||||  |||||||||||| |||||||  ||||| |||||||||| ||| |||     || ||||| || |||||| ||    
T  40146024 ggttcgatttcctctagtgccaatttatgtgggctaagtccatacagagcttgctctgactttaaatgggcccccacaaccacaagtgggtggtgagttt 40145925  T
Q  236 ggtcccctcggattaatcgattattggatcggatac 271  Q
    ||||||||||||||| |||||| |||||||||||||    
T  40145924 ggtcccctcggattagtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 168260 - 168369
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||  |||||||  ||| | |||||||||||||| | ||||| ||| | ||||| |||||||||    
T  168260 ggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgttctgactttaaacgggactcccgctagtggccggtgggattggtcc 168359  T
Q  241 cctcggatta 250  Q
    ||||||||||    
T  168360 cctcggatta 168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 48699877 - 48699958
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||||||||| ||||||| ||||| |||| |||||||| |||||| |||||||||||| ||||||||||    
T  48699877 ctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttca 48699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 7946904 - 7947011
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| |  ||||||| |||| |||||||||| || |||||||||||||||    
T  7946904 gttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctcgctttaaatgggg-ccccgcaagtgggtggtgagattggtccc 7947002  T
Q  242 ctcggatta 250  Q
    ||| |||||    
T  7947003 ctcagatta 7947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 26513235 - 26513148
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||||||||||||| ||||| ||||| ||||||| || |||||||||||||||| |||||| |||||||| ||||||||||||    
T  26513235 ttgctctgactttaaacggg-cccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 32930809 - 32930941
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||| ||||| ||| | |||||||||||||||||| || ||||  ||||| || |||||||||||| ||| |||||| |  |||| ||||| ||||    
T  32930809 gttcgatttcctctggtgcccattttggtgggctaagtccatgcagagcttgctctggctttaaacggggtccctgcaagtggatggtgggattgatccc 32930908  T
Q  242 ctcggattaatcgattattggatcggataccga 274  Q
    ||| |||||||||||| || ||| |||||||||    
T  32930909 ctcagattaatcgattcttagattggataccga 32930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 12877015 - 12876937
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  12877015 ctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattaatggatta---aatcggataccgagttttca 12876937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 21726788 - 21726921
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||| |||  ||| | |  ||||||||||| ||||| ||||| ||||||| | ||| |||    
T  21726788 ggttcgattccctttggtgccaatttcgatgggttaagtccatatagagcttgttctagctttaaacgggtcccccacaagtgggcggtggggttgatcc 21726887  T
Q  241 cctcggattaatcgattattggatcggataccga 274  Q
    |||| |||||||||||| ||||||||||||||||    
T  21726888 cctcagattaatcgattcttggatcggataccga 21726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 2272403 - 2272543
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| ||||||||||  || |||||| | ||||||||||  ||||| | |||||| |||||||||||||||||||  ||||  ||||||  ||||| |||    
T  2272403 ggtttgattccctctgatgccaatttcgctgggctaagttcatacaaagtttgctctgactttaaacggggcccctacaagggggcggtaggattgatcc 2272502  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    | |||||||| |||||| |  |||||||||| |||||||||    
T  2272503 catcggattagtcgattctaagatcggatactgagttttca 2272543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 50202664 - 50202742
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| ||| ||||||| |||||||  ||||||||||||||||||||||||| || ||||||||| ||||||||    
T  50202664 ctttaaacgggaccctcgcaagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagtttt 50202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 37351531 - 37351454
Alignment:
Q  200 ctttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttt 278  Q
    ||||||||||| ||||| ||||| ||||||| ||||||||||||||||||| ||| |  ||||||||||||||||||||    
T  37351531 ctttaaacggg-cccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 14603947 - 14603995
Alignment:
Q  233 attggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttca 14603995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 27159212 - 27159284
Alignment:
Q  209 gggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||||||| | ||||| ||||||||||||| ||||| |||||  |||||||||||| ||||||||||    
T  27159212 gggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttca 27159284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 2537802 - 2537861
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggatta 250  Q
    |||||||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  2537802 ttgctttggctttaaacgggccccccgcaagtgggcggagggattggtcccctcggatta 2537861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 40802171 - 40802069
Alignment:
Q  176 aagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgag 275  Q
    ||||| |||||||  ||||| |||||||||||||| |||| |||||| || |||||||||||||| || | |||| |||||| ||| |||| ||||||||    
T  40802171 aagtccatacagagcttgctctgactttaaacgggtcccc-gcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgag 40802073  T
Q  276 tttt 279  Q
    ||||    
T  40802072 tttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 1486477 - 1486617
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccc--cgcaagttggcggtgagattgg 237  Q
    ||||||||||||| | ||| |||||| | |||| |||||| |||||||  |||||| ||||||  |||||||||||  ||||||| | ||||| ||| ||    
T  1486477 ggttcgattccctttggtgccaatttcgatggg-taagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacggtgggatcgg 1486575  T
Q  238 tcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||| ||||| ||| |  |||||||||||||||||||||    
T  1486576 tcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 1818809 - 1818905
Alignment:
Q  182 atacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||  |||||||| ||||||||||| ||||||||||| || |    |||||||| | |||||||| || |||||||||||||||||||||||||    
T  1818809 atacagagcttgctttggctttaaacggg-cccccgcaagtaggtgacatgattggtcacatcggattagtcaattattggatcggataccgagtttt 1818905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 23041650 - 23041719
Alignment:
Q  210 ggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| |||||||| | | ||| |||||||||||||| |||| |||||| |||||||||||||||||||||    
T  23041650 ggcctccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 6776201 - 6776277
Alignment:
Q  203 taaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||||||||||||| |||||||  |||| ||| ||| ||||| |||||||||| |||| ||||||| ||||    
T  6776201 taaacggggcccccgcaagtaggcggtggaattgatccactcagattagtcgattattgtatcgaataccgaatttt 6776277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 26820248 - 26820384
Alignment:
Q  143 ttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccc 242  Q
    ||||||||||| |  ||||||||||  |||| |||||| |||||||| ||||| || ||||||| ||| |||| |||||| |  ||||  |||| || |     
T  26820248 ttcgattccctatgatgtcaatttttatgggttaagtccatacagaacttgctctgcctttaaatgggacccctgcaagtggatggtggaattgatcgct 26820347  T
Q  243 tcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| |||||| |||||| | ||||||||||||    
T  26820348 tcggattagtcgattcttggattgaataccgagtttt 26820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 5315481 - 5315528
Alignment:
Q  232 gattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||    
T  5315481 gattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 35138118 - 35138185
Alignment:
Q  212 cccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||| ||||||| ||||| | ||||||||||| ||| |  |||||||||||||||||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 16899562 - 16899671
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaa-tttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||| ||| |||||| ||||||| | ||| ||||| |  |||||| ||  ||  ||||||||||| |||||| | ||||||||||||||    
T  16899562 ggttcgattccctctggtgccaatttcggtgggcca-gtccatacaaagctttgctctggtttagaacggggcccctgcaagtggacggtgagattggtc 16899660  T
Q  240 ccctcggatta 250  Q
    |||||||||||    
T  16899661 ccctcggatta 16899671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 6122861 - 6122897
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6122861 ggttcgattccctctagtgtcaatttgggtgggctaa 6122897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 23232409 - 23232300
Alignment:
Q  135 gtttcgggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaattt----gctttgactttaaacggggcccccgcaagttggcggtg 230  Q
    ||||| ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||    ||| || ||||||| ||| ||||||||||| || ||||    
T  23232409 gtttcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtg 23232310  T
Q  231 agattggtcc 240  Q
     |||||||||    
T  23232309 ggattggtcc 23232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 27542504 - 27542570
Alignment:
Q  213 ccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||| | ||||||||||||| ||||||| ||||||||  || || ||||||||||| ||||||    
T  27542504 ccccgcaaatcggcggtgagattgatcccctcagattaatcagttgtttgatcggataccaagtttt 27542570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 902126 - 902089
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  902126 ctaaccaagctactaactctagtttacctatcaactaa 902089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 3282850 - 3282813
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  3282850 ctaaccaagctactaactctagtttacctatcaactaa 3282813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 3284551 - 3284514
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  3284551 ctaaccaagctactaactctagtttacctatcaactaa 3284514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 9312078 - 9312041
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  9312078 ctaaccaagctactaactctagtttacctatcaactaa 9312041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 37664737 - 37664774
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  37664737 ctaaccaagctactaactctagtttacctatcaactaa 37664774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 37674459 - 37674496
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  37674459 ctaaccaagctactaactctagtttacctatcaactaa 37674496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 37702235 - 37702198
Alignment:
Q  318 ctaatcaagctactaactctagttaacctatcaactaa 355  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  37702235 ctaaccaagctactaactctagtttacctatcaactaa 37702198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 25237127 - 25237028
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacaga-atttgctttgactttaaacggggcccccgcaagttggcggtgagattggtc 239  Q
    ||||||||||||||||||| |||||| ||||||| ||||| |||||||  |||||| ||||||  || || ||| |||||||| | |||||  |||||||    
T  25237127 ggttcgattccctctagtgccaatttcggtgggc-aagtccatacagagttttgctctgacttagaatggtgcctccgcaagtggacggtggaattggtc 25237029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 37349663 - 37349719
Alignment:
Q  223 tggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||||||||||||||| ||||  |||||||| || |||||||| ||| ||||||||    
T  37349663 tggcggtgagattggtctcctcaaattaatcggttcttggatcgtatagcgagtttt 37349719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 44961832 - 44961868
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  44961832 ggttcgattctctctagtgtcaatttgggtgggctaa 44961868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 40384 - 40523
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| ||||||| |    
T  40384 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-c 40482  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  40483 cctcggattagtcgattcttggatcggataccgagttttca 40523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 39152 - 39291
Alignment:
Q  142 gttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtccc 241  Q
    |||||||||||||| ||| |||||| ||||||||| ||| |||||||| ||| | || ||||||||||||||||||||||| ||||||| ||||||||||    
T  39152 gttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaagtgggcggtgggattggtccc 39251  T
Q  242 ctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||||||| |||||| ||||||| |||||||||||||||    
T  39252 ctcggattagtcgattcttggatcagataccgagttttca 39291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 161868 - 162008
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| || |||| || ||||||||||||||| ||||||| |||||||||    
T  161868 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttttaatggggcccccgcaagtgggcggtgggattggtcc 161967  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| ||||||| |||||||||||||||    
T  161968 cctcggattagtcgattcttggatcagataccgagttttca 162008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 7447 - 7309
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||  ||| |||||| ||||||||||||| |||||||  || || || ||||||||||||||||||||||| ||||||| |||||||||    
T  7447 ggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 7348  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||||||| |||||| |||||||||||||| ||||||    
T  7347 cctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 97504 - 97366
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||| |||||||||||||| ||||||||||| ||||||| |||||||||    
T  97504 ggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacgggacccccgcaagtgggcggtgggattggtcc 97405  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
     |||| |||| ||| || ||||| |||||||||||||||    
T  97404 tctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 9437 - 9298
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||||||||| | ||||| |||||||||    
T  9437 ggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcc 9338  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| |||||| || ||||||||||||||||||||    
T  9337 cctcgaattagtcgattctt-gatcggataccgagttttca 9298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 12138 - 11999
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| |||| |||| ||||| | ||||| |||||||||    
T  12138 ggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgggg-ccccacaagtggacggtgggattggtcc 12040  T
Q  241 cctcggattaatcgattattggatc-ggataccgagttttca 281  Q
    ||||| |||| || ||| || |||| ||||||||||||||||    
T  12039 cctcgaattagtcaattctt-gatcgggataccgagttttca 11999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 53009 - 52869
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| ||||||| || || |||||||  ||||| || |||||||||||||||||||| || ||||||  |||||||||    
T  53009 ggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaaacggggcccccgcaggtgggcggtaggattggtcc 52910  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
     ||||||||| |||||| ||| |||||||||||||||||||    
T  52909 tctcggattagtcgattcttgaatcggataccgagttttca 52869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 1194 - 1057
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| ||||||||||||||| | ||||| |||||||||    
T  1194 ggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcc 1095  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| |||| |||||| || ||||||||||||||||||    
T  1094 cctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 13182 - 13047
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||| |||||| |||||| |||||| |||||||  |||||   |||||||||||||||||||||||| | ||||| ||||| |||    
T  13182 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgct---actttaaacggggcccccgcaagtggacggtgggattgatcc 13086  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| ||||| | |||| |||||||||||||||||||||    
T  13085 cctcagattagttgattcttggatcggataccgagtttt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 15050 - 15178
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||| ||||||||| |||  ||||| |||||| |||||| || ||||  ||||| || ||||||| ||| ||||||||||| ||||| | ||||||||     
T  15050 ggttcaattccctctggtgctaatttcggtgggttaagtccatccagagcttgctctggctttaaatgggccccccgcaagtgggcgg-gggattggtct 15148  T
Q  241 cctcggattaatcgattattggatcggata 270  Q
    |||||||||| || ||| ||||||||||||    
T  15149 cctcggattagtcaattcttggatcggata 15178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 32347 - 32486
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| | ||||||||||||| || |||| |||||||||    
T  32347 ggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcc 32446  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  32447 cctcggattagtcgattctt-gatcggataccgagttttca 32486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 2535 - 2426
Alignment:
Q  170 tgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggat 269  Q
    ||||||||||| |||||||  ||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||  |  ||| |||||||    
T  2535 tgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggat 2436  T
Q  270 accgagtttt 279  Q
    ||||||||||    
T  2435 accgagtttt 2426  T

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Target: scaffold0068 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 41782 - 41643
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||||||||| ||  |||||| | || |||||||| |||||||  ||||| || |||||||||||||||| |||||| |||  || |||||||||    
T  41782 ggttcgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcaatgggattggtcc 41683  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    |||||||||| |||||| || |||||||||| |||||||||    
T  41682 cctcggattagtcgattctt-gatcggatacagagttttca 41643  T

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Target: scaffold0049 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 66863 - 66951
Alignment:
Q  191 ttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    ||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |  |||||||||||||||||||||    
T  66863 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0459 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 10831 - 10693
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    ||||||||| ||||| | | |||||| ||||||||||||| |||||||  ||||| || ||||||| |||| |||| ||||| | ||||| |||||||||    
T  10831 ggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgggg-ccccacaagtggacggtgggattggtcc 10733  T
Q  241 cctcggattaatcgattattggatcggataccgagttttca 281  Q
    ||||| |||| || ||| || ||||||||||||||||||||    
T  10732 cctcgaattagtcaattctt-gatcggataccgagttttca 10693  T

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Target: scaffold0717 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 96 - 1
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattg 236  Q
    |||||||||||||||  ||||||||| | ||||||||||| ||||||| |||||| |  ||||||||||||||||| || || ||||||| |||||    
T  96 ggttcgattccctcttatgtcaatttcgatgggctaagtccatacagagtttgctctagctttaaacggggcccccacatgtgggcggtgggattg 1  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 20281 - 20418
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaagtcaatacagaatttgctttgactttaaacggggcccccgcaagttggcggtgagattggtcc 240  Q
    |||| |||||||||| ||| ||||||   ||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||| |||||| | |||| | |    
T  20281 ggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-c 20379  T
Q  241 cctcggattaatcgattattggatcggataccgagtttt 279  Q
     ||||||||| || ||| ||||| |||||||||||||||    
T  20380 tctcggattagtcaattcttggaccggataccgagtttt 20418  T

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Target: scaffold0199 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 8513 - 8451
Alignment:
Q  217 gcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||||| ||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 17442 - 17512
Alignment:
Q  8 ctatatggaatcattcctcagatttgcttcttgaaaggaatttctgtatttccaaaggtaaactacggata 78  Q
    ||||||||| || |||||||||||||||||||||| |||||  |||||| |||||||||||| || |||||    
T  17442 ctatatggattcgttcctcagatttgcttcttgaagggaatacctgtatatccaaaggtaaaatatggata 17512  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 27903 - 27966
Alignment:
Q  215 ccgcaagttggcggtgagattggtcccctcggattaatcgattattggatcggataccgagttt 278  Q
    |||||||| || ||||||||| |||||||||||||| ||| || ||||||| ||||||||||||    
T  27903 ccgcaagtgggtggtgagatttgtcccctcggattagtcggttcttggatcagataccgagttt 27966  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 123117 - 123066
Alignment:
Q  227 ggtgagattggtcccctcggattaatcgattattggatcggataccgagtttt 279  Q
    |||| |||||||||||||||||||||||| | |||||||||||||| ||||||    
T  123117 ggtgggattggtcccctcggattaatcga-tcttggatcggataccaagtttt 123066  T

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Target: scaffold0300 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 4407 - 4443
Alignment:
Q  141 ggttcgattccctctagtgtcaattttggtgggctaa 177  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  4407 ggttcgattccctctagtgtcaatttgggtggactaa 4443  T

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