View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12720_low_1 (Length: 602)

Name: NF12720_low_1
Description: NF12720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12720_low_1
NF12720_low_1
[»] scaffold0026 (2 HSPs)
scaffold0026 (9-599)||(11780-12376)
scaffold0026 (218-528)||(111425-111741)
[»] scaffold0029 (3 HSPs)
scaffold0029 (20-599)||(111442-112005)
scaffold0029 (15-225)||(91512-91722)
scaffold0029 (15-225)||(97238-97448)
[»] chr6 (39 HSPs)
chr6 (10-562)||(29614114-29614673)
chr6 (15-599)||(12167899-12168487)
chr6 (15-599)||(19785800-19786388)
chr6 (15-599)||(19877992-19878580)
chr6 (15-579)||(19286808-19287376)
chr6 (9-599)||(18799968-18800562)
chr6 (15-579)||(19883768-19884336)
chr6 (295-540)||(23057761-23058006)
chr6 (15-528)||(34639986-34640508)
chr6 (15-528)||(34646660-34647182)
chr6 (15-528)||(25469704-25470223)
chr6 (218-527)||(23838937-23839253)
chr6 (9-280)||(9187023-9187294)
chr6 (9-280)||(24513100-24513370)
chr6 (218-539)||(10986169-10986497)
chr6 (218-527)||(4477596-4477912)
chr6 (9-525)||(21565214-21565717)
chr6 (394-596)||(930030-930228)
chr6 (58-266)||(19471605-19471813)
chr6 (9-233)||(20008250-20008474)
chr6 (58-266)||(25396750-25396959)
chr6 (15-225)||(21364788-21364998)
chr6 (15-225)||(23968770-23968980)
chr6 (70-243)||(11288962-11289136)
chr6 (92-220)||(19300083-19300211)
chr6 (70-244)||(31252012-31252187)
chr6 (70-266)||(9099341-9099536)
chr6 (70-266)||(29097455-29097650)
chr6 (123-247)||(15458134-15458257)
chr6 (123-247)||(15464729-15464852)
chr6 (472-581)||(24512792-24512899)
chr6 (475-527)||(9187498-9187550)
chr6 (471-527)||(25348486-25348542)
chr6 (471-525)||(25598643-25598697)
chr6 (202-266)||(2287039-2287103)
chr6 (513-572)||(19819889-19819946)
chr6 (471-527)||(25397172-25397228)
chr6 (458-528)||(31252408-31252478)
chr6 (471-527)||(19471335-19471391)
[»] scaffold1773 (1 HSPs)
scaffold1773 (15-599)||(714-1301)
[»] chr4 (25 HSPs)
chr4 (15-599)||(8045764-8046353)
chr4 (9-599)||(11847633-11848237)
chr4 (9-280)||(15407666-15407937)
chr4 (15-528)||(53483238-53483760)
chr4 (54-266)||(14486233-14486446)
chr4 (9-243)||(16147123-16147357)
chr4 (92-247)||(27905877-27906032)
chr4 (72-266)||(8834486-8834681)
chr4 (58-243)||(13888219-13888405)
chr4 (59-266)||(15244793-15245001)
chr4 (58-243)||(13887362-13887548)
chr4 (58-250)||(15307697-15307890)
chr4 (472-539)||(15408139-15408206)
chr4 (471-527)||(8834895-8834951)
chr4 (471-527)||(13888641-13888697)
chr4 (473-525)||(14486661-14486713)
chr4 (471-527)||(15245215-15245271)
chr4 (203-266)||(14911802-14911865)
chr4 (471-522)||(22724691-22724742)
chr4 (513-550)||(1650182-1650219)
chr4 (492-533)||(15747551-15747592)
chr4 (513-581)||(14063730-14063798)
chr4 (513-541)||(14507215-14507243)
chr4 (471-527)||(15308120-15308176)
chr4 (218-266)||(18213504-18213552)
[»] scaffold0006 (1 HSPs)
scaffold0006 (15-599)||(49715-50302)
[»] scaffold0924 (1 HSPs)
scaffold0924 (15-599)||(682-1272)
[»] scaffold0117 (2 HSPs)
scaffold0117 (25-599)||(8508-9086)
scaffold0117 (103-599)||(1831-2330)
[»] chr3 (39 HSPs)
chr3 (15-525)||(24192488-24193009)
chr3 (20-599)||(41455028-41455612)
chr3 (218-525)||(20247791-20248098)
chr3 (20-528)||(24933828-24934343)
chr3 (218-540)||(14762745-14763075)
chr3 (218-525)||(38310802-38311117)
chr3 (15-230)||(10389751-10389966)
chr3 (15-230)||(10414840-10415055)
chr3 (15-230)||(10421510-10421725)
chr3 (15-538)||(16801457-16801987)
chr3 (218-527)||(9534067-9534382)
chr3 (72-525)||(55499104-55499569)
chr3 (230-528)||(23370505-23370810)
chr3 (15-280)||(17240768-17241032)
chr3 (63-266)||(13313164-13313368)
chr3 (92-266)||(13302508-13302683)
chr3 (63-266)||(13324056-13324260)
chr3 (15-196)||(17131265-17131448)
chr3 (75-264)||(18928837-18929027)
chr3 (9-224)||(14865374-14865589)
chr3 (17-266)||(12033714-12033963)
chr3 (70-266)||(19235338-19235533)
chr3 (20-89)||(55499572-55499641)
chr3 (466-527)||(18929239-18929300)
chr3 (463-527)||(17240513-17240577)
chr3 (473-542)||(13302226-13302295)
chr3 (473-542)||(13323773-13323842)
chr3 (414-528)||(10389443-10389557)
chr3 (414-528)||(10414532-10414646)
chr3 (414-528)||(10421202-10421316)
chr3 (473-542)||(13312882-13312951)
chr3 (202-266)||(16800747-16800811)
chr3 (473-528)||(12033444-12033499)
chr3 (473-528)||(17131732-17131787)
chr3 (473-528)||(51301589-51301644)
chr3 (513-543)||(18127703-18127733)
chr3 (513-543)||(18135473-18135503)
chr3 (513-542)||(12355166-12355195)
chr3 (513-541)||(13202701-13202729)
[»] chr7 (46 HSPs)
chr7 (15-599)||(13122848-13123436)
chr7 (15-571)||(12709804-12710365)
chr7 (15-599)||(13743244-13743830)
chr7 (15-599)||(13006968-13007556)
chr7 (15-599)||(12590574-12591163)
chr7 (218-540)||(15167913-15168243)
chr7 (218-532)||(18873098-18873420)
chr7 (218-523)||(10895795-10896108)
chr7 (219-531)||(14422724-14423043)
chr7 (15-280)||(21231216-21231480)
chr7 (19-266)||(11383139-11383387)
chr7 (203-527)||(16009301-16009631)
chr7 (9-266)||(11389616-11389874)
chr7 (92-525)||(16676905-16677348)
chr7 (92-525)||(17651141-17651584)
chr7 (58-266)||(46625537-46625746)
chr7 (57-280)||(13664508-13664730)
chr7 (15-193)||(2966501-2966680)
chr7 (92-280)||(13679105-13679293)
chr7 (20-196)||(20906798-20906974)
chr7 (15-225)||(2464899-2465109)
chr7 (70-247)||(14319918-14320096)
chr7 (148-247)||(14230449-14230548)
chr7 (15-243)||(29181402-29181629)
chr7 (65-243)||(16090659-16090837)
chr7 (65-231)||(20311356-20311522)
chr7 (123-247)||(31155038-31155162)
chr7 (472-581)||(21230908-21231015)
chr7 (15-225)||(3857675-3857884)
chr7 (472-527)||(11382871-11382926)
chr7 (472-527)||(11389348-11389403)
chr7 (472-539)||(20311038-20311107)
chr7 (464-527)||(13679485-13679548)
chr7 (473-528)||(2971254-2971309)
chr7 (203-266)||(14566925-14566988)
chr7 (473-528)||(20906461-20906516)
chr7 (473-527)||(11311059-11311113)
chr7 (513-543)||(46347883-46347913)
chr7 (492-533)||(831628-831669)
chr7 (492-533)||(1196808-1196849)
chr7 (72-105)||(13678863-13678896)
chr7 (512-541)||(14129216-14129245)
chr7 (512-541)||(14136062-14136091)
chr7 (512-541)||(14433034-14433063)
chr7 (492-533)||(34958578-34958619)
chr7 (471-527)||(46625961-46626017)
[»] chr8 (23 HSPs)
chr8 (20-599)||(23866153-23866736)
chr8 (15-599)||(17054127-17054714)
chr8 (9-280)||(14056819-14057090)
chr8 (19-282)||(25111515-25111778)
chr8 (218-525)||(8727735-8728050)
chr8 (218-528)||(44477362-44477678)
chr8 (218-528)||(44492520-44492836)
chr8 (54-280)||(18613846-18614072)
chr8 (15-196)||(24321009-24321191)
chr8 (58-266)||(21839979-21840188)
chr8 (58-266)||(21931275-21931484)
chr8 (295-599)||(27940782-27941085)
chr8 (127-266)||(29643655-29643795)
chr8 (463-527)||(23482053-23482117)
chr8 (471-540)||(18614271-18614340)
chr8 (164-266)||(19750235-19750337)
chr8 (472-539)||(14056552-14056619)
chr8 (472-581)||(25111976-25112083)
chr8 (471-527)||(39364919-39364975)
chr8 (473-540)||(29643373-29643440)
chr8 (473-528)||(24320670-24320725)
chr8 (72-105)||(18613621-18613654)
chr8 (471-527)||(21931696-21931752)
[»] scaffold0025 (1 HSPs)
scaffold0025 (20-525)||(14398-14913)
[»] chr5 (30 HSPs)
chr5 (15-599)||(23528166-23528756)
chr5 (218-532)||(22750879-22751201)
chr5 (218-538)||(38144526-38144852)
chr5 (203-527)||(28370055-28370385)
chr5 (218-527)||(19512125-19512441)
chr5 (54-280)||(18408200-18408423)
chr5 (15-196)||(19236435-19236617)
chr5 (15-196)||(22467315-22467497)
chr5 (15-196)||(22460691-22460873)
chr5 (70-247)||(34829674-34829852)
chr5 (65-231)||(22439051-22439218)
chr5 (70-196)||(24930266-24930393)
chr5 (463-527)||(18407944-18408008)
chr5 (472-539)||(22438735-22438803)
chr5 (134-243)||(20772625-20772733)
chr5 (463-527)||(23111200-23111264)
chr5 (134-243)||(20781400-20781508)
chr5 (65-220)||(28889651-28889805)
chr5 (65-220)||(28896355-28896509)
chr5 (65-220)||(28909603-28909757)
chr5 (65-220)||(28925181-28925335)
chr5 (65-220)||(28931295-28931449)
chr5 (65-220)||(28945998-28946152)
chr5 (472-599)||(42961566-42961691)
chr5 (473-528)||(19236900-19236955)
chr5 (475-528)||(22461158-22461211)
chr5 (475-528)||(22467782-22467835)
chr5 (218-266)||(22337258-22337306)
chr5 (218-266)||(22340796-22340844)
chr5 (218-266)||(42961304-42961352)
[»] scaffold0247 (2 HSPs)
scaffold0247 (91-599)||(10953-11466)
scaffold0247 (15-84)||(10896-10966)
[»] scaffold0090 (1 HSPs)
scaffold0090 (62-538)||(17750-18235)
[»] chr2 (33 HSPs)
chr2 (92-599)||(26583440-26583951)
chr2 (9-527)||(23101463-23101988)
chr2 (15-528)||(5706023-5706543)
chr2 (218-540)||(19661441-19661769)
chr2 (218-527)||(6483457-6483772)
chr2 (218-527)||(6486924-6487239)
chr2 (9-525)||(23089057-23089560)
chr2 (65-525)||(23878595-23879060)
chr2 (48-280)||(23063252-23063484)
chr2 (72-247)||(23264734-23264909)
chr2 (15-196)||(10111-10293)
chr2 (63-266)||(24661159-24661362)
chr2 (70-247)||(27208008-27208186)
chr2 (70-245)||(27210345-27210521)
chr2 (72-247)||(21907948-21908124)
chr2 (70-248)||(26884797-26884975)
chr2 (91-247)||(23168590-23168747)
chr2 (91-247)||(23579847-23580004)
chr2 (91-225)||(25181231-25181365)
chr2 (15-84)||(26583383-26583452)
chr2 (463-527)||(23265133-23265197)
chr2 (463-527)||(23280201-23280265)
chr2 (466-527)||(21908353-21908414)
chr2 (471-527)||(24661576-24661632)
chr2 (473-528)||(10577-10632)
chr2 (203-266)||(6260444-6260507)
chr2 (473-528)||(25180929-25180984)
chr2 (513-599)||(6260102-6260186)
chr2 (72-105)||(23063084-23063117)
chr2 (15-52)||(25181384-25181421)
chr2 (475-539)||(23168287-23168351)
chr2 (475-539)||(23579544-23579608)
chr2 (473-537)||(26885183-26885246)
[»] scaffold0634 (1 HSPs)
scaffold0634 (62-368)||(3244-3558)
[»] scaffold0077 (1 HSPs)
scaffold0077 (9-525)||(3624-4147)
[»] scaffold0154 (1 HSPs)
scaffold0154 (92-599)||(30466-30982)
[»] scaffold0058 (1 HSPs)
scaffold0058 (191-599)||(3-414)
[»] scaffold0456 (6 HSPs)
scaffold0456 (9-241)||(565-797)
scaffold0456 (9-241)||(7710-7942)
scaffold0456 (445-532)||(904-991)
scaffold0456 (445-532)||(8049-8136)
scaffold0456 (295-372)||(813-889)
scaffold0456 (295-372)||(7958-8034)
[»] scaffold0235 (3 HSPs)
scaffold0235 (9-266)||(22862-23120)
scaffold0235 (124-266)||(15204-15346)
scaffold0235 (474-585)||(22537-22646)
[»] chr1 (26 HSPs)
chr1 (218-527)||(20437024-20437340)
chr1 (54-266)||(18712373-18712585)
chr1 (414-599)||(41111977-41112159)
chr1 (15-196)||(20851471-20851653)
chr1 (15-196)||(20858098-20858280)
chr1 (15-196)||(21705810-21705992)
chr1 (15-196)||(21710353-21710535)
chr1 (92-220)||(19961781-19961909)
chr1 (70-246)||(20045240-20045416)
chr1 (91-280)||(11157702-11157891)
chr1 (58-197)||(22030085-22030225)
chr1 (463-540)||(32651563-32651640)
chr1 (463-527)||(18712790-18712854)
chr1 (472-527)||(19663517-19663572)
chr1 (471-527)||(20805320-20805376)
chr1 (472-527)||(11158093-11158148)
chr1 (471-525)||(10811785-10811839)
chr1 (218-280)||(32651310-32651371)
chr1 (473-528)||(20851132-20851187)
chr1 (473-528)||(20857759-20857814)
chr1 (512-543)||(21665177-21665208)
chr1 (473-528)||(21706276-21706331)
chr1 (473-528)||(21710818-21710873)
chr1 (513-543)||(19665847-19665877)
chr1 (513-542)||(19860170-19860199)
chr1 (218-266)||(16372689-16372737)
[»] scaffold0476 (1 HSPs)
scaffold0476 (74-525)||(3295-3753)
[»] scaffold0261 (2 HSPs)
scaffold0261 (54-247)||(23858-24051)
scaffold0261 (473-539)||(23558-23624)
[»] scaffold0107 (2 HSPs)
scaffold0107 (9-247)||(40816-41055)
scaffold0107 (472-581)||(40480-40587)
[»] scaffold0796 (2 HSPs)
scaffold0796 (134-533)||(1727-2133)
scaffold0796 (337-533)||(5750-5943)
[»] scaffold0553 (1 HSPs)
scaffold0553 (230-528)||(10195-10500)
[»] scaffold0544 (1 HSPs)
scaffold0544 (230-528)||(1525-1830)
[»] scaffold0020 (2 HSPs)
scaffold0020 (54-266)||(102197-102410)
scaffold0020 (463-527)||(101928-101992)
[»] scaffold0139 (3 HSPs)
scaffold0139 (54-280)||(15254-15480)
scaffold0139 (472-527)||(14997-15052)
scaffold0139 (513-543)||(26892-26922)
[»] scaffold0461 (2 HSPs)
scaffold0461 (9-280)||(264-534)
scaffold0461 (463-527)||(8-72)
[»] scaffold0222 (2 HSPs)
scaffold0222 (54-280)||(16396-16619)
scaffold0222 (463-527)||(16811-16875)
[»] scaffold0124 (3 HSPs)
scaffold0124 (57-280)||(34533-34755)
scaffold0124 (472-527)||(34276-34331)
scaffold0124 (203-266)||(35711-35774)
[»] scaffold0138 (2 HSPs)
scaffold0138 (58-264)||(1395-1601)
scaffold0138 (471-527)||(12296-12352)
[»] scaffold0023 (2 HSPs)
scaffold0023 (20-243)||(134979-135201)
scaffold0023 (473-528)||(135438-135493)
[»] scaffold0483 (1 HSPs)
scaffold0483 (20-266)||(11278-11524)
[»] scaffold0004 (4 HSPs)
scaffold0004 (91-247)||(116507-116664)
scaffold0004 (58-266)||(128927-129136)
scaffold0004 (463-540)||(116887-116964)
scaffold0004 (72-105)||(116266-116299)
[»] scaffold0094 (1 HSPs)
scaffold0094 (58-266)||(51822-52032)
[»] scaffold0053 (2 HSPs)
scaffold0053 (58-266)||(81483-81692)
scaffold0053 (9-243)||(79783-80017)
[»] scaffold0232 (1 HSPs)
scaffold0232 (92-266)||(18700-18874)
[»] scaffold0085 (1 HSPs)
scaffold0085 (15-196)||(4011-4192)
[»] scaffold0028 (2 HSPs)
scaffold0028 (58-266)||(1645-1854)
scaffold0028 (92-240)||(65686-65836)
[»] scaffold0317 (3 HSPs)
scaffold0317 (92-280)||(998-1186)
scaffold0317 (464-527)||(1378-1441)
scaffold0317 (72-105)||(756-789)
[»] scaffold1469 (1 HSPs)
scaffold1469 (91-266)||(967-1143)
[»] scaffold0034 (2 HSPs)
scaffold0034 (92-247)||(72895-73051)
scaffold0034 (413-525)||(73224-73337)
[»] scaffold0335 (2 HSPs)
scaffold0335 (58-266)||(2896-3105)
scaffold0335 (471-527)||(2628-2684)
[»] scaffold0031 (2 HSPs)
scaffold0031 (58-266)||(121479-121688)
scaffold0031 (58-266)||(132356-132565)
[»] scaffold0001 (3 HSPs)
scaffold0001 (70-248)||(493314-493492)
scaffold0001 (58-191)||(525341-525475)
scaffold0001 (473-537)||(493019-493082)
[»] scaffold0453 (1 HSPs)
scaffold0453 (70-247)||(10838-11016)
[»] scaffold0206 (1 HSPs)
scaffold0206 (70-248)||(18210-18387)
[»] scaffold0348 (2 HSPs)
scaffold0348 (70-225)||(8949-9104)
scaffold0348 (473-528)||(9336-9391)
[»] scaffold2054 (2 HSPs)
scaffold2054 (91-243)||(320-473)
scaffold2054 (439-539)||(680-781)
[»] scaffold0384 (1 HSPs)
scaffold0384 (70-243)||(16355-16525)
[»] scaffold0169 (1 HSPs)
scaffold0169 (58-266)||(6546-6758)
[»] scaffold0129 (1 HSPs)
scaffold0129 (416-534)||(45268-45386)
[»] scaffold0249 (1 HSPs)
scaffold0249 (123-232)||(14195-14304)
[»] scaffold0310 (2 HSPs)
scaffold0310 (472-539)||(17643-17711)
scaffold0310 (65-175)||(17512-17623)
[»] scaffold0019 (1 HSPs)
scaffold0019 (472-539)||(135473-135540)
[»] scaffold0600 (1 HSPs)
scaffold0600 (184-266)||(438-520)
[»] scaffold0146 (1 HSPs)
scaffold0146 (463-527)||(13623-13687)
[»] scaffold0131 (1 HSPs)
scaffold0131 (70-220)||(591-739)
[»] scaffold0815 (1 HSPs)
scaffold0815 (476-539)||(1453-1516)
[»] scaffold0099 (1 HSPs)
scaffold0099 (91-225)||(12550-12688)
[»] scaffold1461 (1 HSPs)
scaffold1461 (62-119)||(1706-1763)
[»] scaffold0096 (1 HSPs)
scaffold0096 (471-531)||(39503-39563)
[»] scaffold0790 (1 HSPs)
scaffold0790 (499-538)||(5480-5519)
[»] scaffold0127 (1 HSPs)
scaffold0127 (473-528)||(10239-10294)
[»] scaffold0012 (1 HSPs)
scaffold0012 (203-266)||(222477-222540)
[»] scaffold1318 (1 HSPs)
scaffold1318 (473-527)||(1913-1967)
[»] scaffold0609 (1 HSPs)
scaffold0609 (458-528)||(5857-5927)
[»] scaffold0002 (1 HSPs)
scaffold0002 (513-543)||(371400-371430)
[»] scaffold0011 (2 HSPs)
scaffold0011 (513-542)||(252847-252876)
scaffold0011 (513-542)||(259453-259482)
[»] scaffold0243 (1 HSPs)
scaffold0243 (513-541)||(11459-11487)
[»] scaffold0037 (1 HSPs)
scaffold0037 (218-266)||(71614-71662)
[»] scaffold0015 (1 HSPs)
scaffold0015 (513-581)||(170907-170975)


Alignment Details
Target: scaffold0026 (Bit Score: 442; Significance: 0; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 9 - 599
Target Start/End: Complemental strand, 12376 - 11780
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12376 gctcgctcactgttcgcttaagcgaacgggtaaaatcgcatt-tgggcagcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaat 12278  T
Q  109 catctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttta 208  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||    
T  12277 catctggccagtgcaaaacctatggtttcagacctcttctcactccaaaaacccaatttaaatcccctgatcacccaaagtggtttccaacagatgttta 12178  T
Q  209 caggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc------ 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||          
T  12177 caggtcctatatacaactaggcatctaaaggaacacaaaacagccatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattca 12078  T
Q  303 --caatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgt 400  Q
      |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||| |    
T  12077 tccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattacaagagaattaacatgatcat 11978  T
Q  401 tacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgatta 500  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11977 tacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgatta 11878  T
Q  501 ttgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  11877 ttgagagatagtctcacccttaccttagttttgcag-aaagattatactgcatgaatcggtttctaggctctcctctcttgctctggctcttcttctcc 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 218 - 528
Target Start/End: Original strand, 111425 - 111741
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  111425 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 111524  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  ||||||||     
T  111525 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattc 111623  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  111624 ccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 111722  T
Q  510 agtctcacccttaccttag 528  Q
    |||||||||||||||||||    
T  111723 agtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 389; Significance: 0; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 20 - 599
Target Start/End: Original strand, 111442 - 112005
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| |||||||||||||||||||||||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  111442 gttcgcttaagcgaacgggtaaaatcgcatactgggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggcag 111541  T
Q  120 tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctata 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  111542 tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgtttcccaacagatg-ttacaggtcctata 111640  T
Q  220 tacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatccaatcactcataaattt 319  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||            |||||    
T  111641 tacaactaggcatctaaaggaacacaaaacagccatcaacaacaacaattacagatcattccaccatcatacacaaattcatc------------aattt 111728  T
Q  320 caatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaa 419  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  111729 caatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaa 111828  T
Q  420 tcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaa-ttttcagaaattatagattatgattattgagacatagtctcacc 518  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  111829 tcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacc 111928  T
Q  519 cttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    ||||||||||||||||||  ||||||| |||||| | ||||| |||||||||| ||||||||| ||| ||||| |||||||    
T  111929 cttaccttagttttgcag--aaaattagacagcaaggatcgg-ttctaggctc-cctctcttgttcttgctcttcttctcc 112005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 91722 - 91512
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| |||||||||| |||||||||| || | | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  91722 tcactgttcgcttaagcgaatgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcgtctg 91623  T
Q  115 ggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || || | |||| |||||  |||||||| ||| |||||||||||||||||||||||||||||   |||||||||| |||||||   | ||||||||| ||    
T  91622 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc-tgaaatgtttacaagt 91524  T
Q  214 cctatatacaac 225  Q
    ||||||||||||    
T  91523 cctatatacaac 91512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 97448 - 97238
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| |||||||||| |||||||||| || | | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  97448 tcactgttcgcttaagcgaatgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcgtctg 97349  T
Q  115 ggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || || | |||| |||||  |||||||| | | |||||||||||||||||||||||||||||   |||||||||| |||||||   | ||||||||| ||    
T  97348 ggcagggtaaaagctacgattttcagacttttcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc-tgaaatgtttacaagt 97250  T
Q  214 cctatatacaac 225  Q
    ||||||||||||    
T  97249 cctatatacaac 97238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 383; Significance: 0; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 10 - 562
Target Start/End: Complemental strand, 29614673 - 29614114
Alignment:
Q  10 ctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatc 109  Q
    |||| ||||||||| |||||||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29614673 ctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagtttgcatgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatc 29614574  T
Q  110 atctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttac 209  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  29614573 atctgtgcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccagcagatgtttac 29614474  T
Q  210 aggtcctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattca 300  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||        ||||||    
T  29614473 aggtcctatatacaactaggcattctaaagaaacacaaatcagccatcaacaacaacacttacagattattccaccatcatacacaaattcatcaattca 29614374  T
Q  301 tccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgt 400  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  || |||||||||||||| ||||| |    
T  29614373 tccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-acaagagaattaacatgatcat 29614275  T
Q  401 tacccatttcccttcagaatcatcatcaaaccctaaccctcaattta-ttttccaaagctatgcaattaggtcaattttcagaaattatagattatgatt 499  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  29614274 tacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgatt 29614175  T
Q  500 attgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtt 562  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||| |||||| |||||||||    
T  29614174 attgagagatagtctcacccttaccttagttttgcag--aaaattagacagcaagaatcggtt 29614114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 12167899 - 12168487
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  12167899 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctg 12167998  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12167999 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 12168098  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| |||  | |||||| | ||         
T  12168099 ctatatacaactaggcattacaaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcataca 12168198  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  12168199 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 12168297  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  12168298 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 12168394  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||||||  ||||||| |||||| | |||| ||||||||||||||||||| | ||| ||||| |||||||    
T  12168395 gagatagtctcacccttaccttagttttgcag--aaaattagacagcaaggatcgatttctaggctctcctctctagctcttgctcttcttctcc 12168487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 15 - 599
Target Start/End: Complemental strand, 19786388 - 19785800
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  19786388 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctg 19786289  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19786288 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 19786189  T
Q  215 ctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||||   |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| |||  | |||||| | ||         
T  19786188 ctatatacaactaggcattacaaggaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcataca 19786089  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  19786088 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 19785990  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  ||| ||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||    
T  19785989 catt--ccatcagaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaa-tttcagaaattatagattatgattattga 19785893  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||||||  ||||||| |||||| | |||| ||||||||||||||||||| | ||| ||||| |||||||    
T  19785892 gagatagtctcacccttaccttagttttgcag--aaaattagacagcaaggatcgatttctaggctctcctctctagctcttgctcttcttctcc 19785800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 19877992 - 19878580
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  19877992 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcgtctg 19878091  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19878092 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 19878191  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| |||  | |||||| | ||         
T  19878192 ctatatacaactaggcattacaaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcataca 19878291  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  19878292 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 19878390  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  19878391 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 19878487  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||||||  ||||||| |||||| | |||| ||||||||||||||||||| | ||| ||||| |||||||    
T  19878488 gagatagtctcacccttaccttagttttgcag--aaaattagacagcaaggatcgatttctaggctctcctctctagctcttgctcttcttctcc 19878580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 15 - 579
Target Start/End: Original strand, 19286808 - 19287376
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  19286808 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctg 19286907  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19286908 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 19287007  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| |||  | |||||| | ||         
T  19287008 ctatatacaactaggcattacaaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcataca 19287107  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  19287108 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 19287206  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  19287207 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 19287303  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctct 579  Q
    || |||||||||||||||||||||||||||||  ||||||| ||| || | |||| |||||||||||||||||||    
T  19287304 gagatagtctcacccttaccttagttttgcag--aaaattagacaacaaggatcgatttctaggctctcctctct 19287376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 9 - 599
Target Start/End: Original strand, 18799968 - 18800562
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| |||||||||||||| |||||| |||| | ||||||||||||||||||||||||||||||||| |  |||||||||||||||| |    
T  18799968 gctcgctcactgttcgcttaagcgaacgggcaaaatcacattcttggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccatt 18800067  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |    
T  18800068 catctgggcagtgcaaaaacctgcgggttca-acctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtgt 18800166  T
Q  208 acaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcata--------cacaaatt 298  Q
    |||||| ||||| ||||||||||||||||||| |||||||| ||| ||| ||||||||||  ||||||||||||||||||||||        ||  ||||    
T  18800167 acaggttctatacacaactaggcatctaaaggaaacacaaa-cagacattaacaacaaca-atgcagatcattccaccatcataccaaacttcatcaatt 18800264  T
Q  299 catccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatc 398  Q
    |||||||||| | || | |||||||||| || |||||||| |||||| |  ||||||| ||||||| ||||||| | || |||| ||||||||| |||||    
T  18800265 catccaatcaattat-attttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaattaacatgatc 18800363  T
Q  399 gttacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tattttccaaagctatgcaattaggtcaattttcagaaattatagattatga 497  Q
     |||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  18800364 attactca-ttccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatga 18800462  T
Q  498 ttattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttct 597  Q
    ||||||||| |||||||||||||||| |||||||||||| ||  |||| ||||||  |||||||| |||||||||||| ||||| ||| ||||| |||||    
T  18800463 ttattgagagatagtctcacccttacattagttttgcag-aaggattacacagca-aaatcggttcctaggctctcctatcttgttcttgctcttcttct 18800560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 579
Target Start/End: Original strand, 19883768 - 19884336
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||    
T  19883768 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccactcgtctg 19883867  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19883868 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 19883967  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| |||  | |||||| | ||         
T  19883968 ctatatacaactaggcattacaaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcataca 19884067  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  19884068 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 19884166  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  19884167 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 19884263  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctct 579  Q
    || ||||||||||||| |||||||||||||||  ||||||| |||||| | |||| |||||||||||||||||||    
T  19884264 gagatagtctcaccctaaccttagttttgcag--aaaattagacagcaaggatcgatttctaggctctcctctct 19884336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 295 - 540
Target Start/End: Original strand, 23057761 - 23058006
Alignment:
Q  295 aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacct 394  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |    
T  23057761 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacat 23057860  T
Q  395 gatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagatta 494  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  23057861 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatta 23057960  T
Q  495 tgattattgagacatagtctcacccttaccttagttttgcagaaaa 540  Q
    ||||||| |||| |||||||||||||||||||| ||| | ||||||    
T  23057961 tgattatcgagagatagtctcacccttaccttaatttagaagaaaa 23058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 15 - 528
Target Start/End: Complemental strand, 34640508 - 34639986
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaa-tcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 113  Q
    |||| |||| |||||||||||||| |||| ||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||    
T  34640508 tcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtct 34640409  T
Q  114 gggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    ||  ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  34640408 ggacagtgcaaaacctacggtttcagaccactcctcactccaaaaactccatttcaatcccctgattacccaaaatgttttccaacagatgtttacaggt 34640309  T
Q  214 cctatatacaactaggcatc-taaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacaca--------aattcatcc 303  Q
    |||||||||||||||||||| ||||| ||||||| ||| ||| ||||||||||| || ||| ||||||| |||||||| || |        ||||||| |    
T  34640308 cctatatacaactaggcatcataaagaaacacaattcaaccaacaacaacaacaattacagaatcattctaccatcattcaaataatcatcaattcatac 34640209  T
Q  304 aatcactcataaatt---tcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgt 400  Q
    |||   ||| |||||   ||||| ||||   |||  | ||||||||| |||||||||||||||||| ||| ||| ||    ||| || |||| | ||| |    
T  34640208 aattcatcaaaaattcagtcaat-aagt--ggattgcggcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctt 34640112  T
Q  401 tacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgatta 500  Q
    ||| ||||  || |||||| ||||||||||||||||   ||   |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  34640111 tactcatt--ccatcagaaccatcatcaaaccctaattttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagatta 34640014  T
Q  501 ttgagacatagtctcacccttaccttag 528  Q
    |||||| |||||||||||||||||||||    
T  34640013 ttgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 15 - 528
Target Start/End: Complemental strand, 34647182 - 34646660
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaa-tcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 113  Q
    |||| |||| |||||||||||||| |||| ||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||    
T  34647182 tcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtct 34647083  T
Q  114 gggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    ||  ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  34647082 ggacagtgcaaaacctacggtttcagaccactcctcactccaaaaactccatttcaatcccctgattacccaaaatgttttccaacagatgtttacaggt 34646983  T
Q  214 cctatatacaactaggcatc-taaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacaca--------aattcatcc 303  Q
    |||||||||||||||||||| ||||| ||||||| ||| ||| ||||||||||| || ||| ||||||| |||||||| || |        ||||||| |    
T  34646982 cctatatacaactaggcatcataaagaaacacaattcaaccaacaacaacaacaattacagaatcattctaccatcattcaaataatcatcaattcatac 34646883  T
Q  304 aatcactcataaatt---tcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgt 400  Q
    |||   ||| |||||   ||||| ||||   |||  | ||||||||| |||||||||||||||||| ||| ||| ||    ||| || |||| | ||| |    
T  34646882 aattcatcaaaaattcagtcaat-aagt--ggattgcggcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctt 34646786  T
Q  401 tacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgatta 500  Q
    ||| ||||  || |||||| ||||||||||||||||   ||   ||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||    
T  34646785 tactcatt--ccatcagaaccatcatcaaaccctaattttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagatta 34646688  T
Q  501 ttgagacatagtctcacccttaccttag 528  Q
    |||||| |||||||||||||||||||||    
T  34646687 ttgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 15 - 528
Target Start/End: Complemental strand, 25470223 - 25469704
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||    
T  25470223 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgttcgcttaagcgacaggtgcttcgcttaagcgaccattcatctg 25470124  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||||||||| |||||||||||||||  ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  25470123 ggcagtgcaaaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgttcacccaaaatgttttccaacagatgtttacaggt 25470024  T
Q  214 cctatatacaactaggcat-ctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc---- 307  Q
    |||||||||||||||||||  ||| | ||||||| ||| ||||||||| ||||| || ||| |||||   |||||||| || | ||||||| | ||        
T  25470023 cctatatacaactaggcataataaggaaacacaattcaaccatcaacagcaacagttacagaatcatcataccatcatgcaaatattcatcaattcatac 25469924  T
Q  308 -actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatc-gtta 402  Q
     | ||||  ||  ||||||||| | || |||  ||||||||||| |||||||| ||||||||| ||||| | |   |  || || |||| | |||  |||    
T  25469923 aattcatcaaacattcaatcaattaatggattgcagcaacaacatggattaagctttcattcttaacatcagactcc--gataactaacatcatctttta 25469826  T
Q  403 cccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattatt 502  Q
    | ||||  || ||||||| |||||||||||||||   |||  |||||||||||| | || |||||||||||| |||||| ||||||||||||||||||||    
T  25469825 ctcatt--ccatcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaa-tttcag-aattatagattatgattatt 25469730  T
Q  503 gagacatagtctcacccttaccttag 528  Q
    |||| |||||||||||||||||||||    
T  25469729 gagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 218 - 527
Target Start/End: Original strand, 23838937 - 23839253
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| |||| ||||||||||||| ||| ||  ||||||| ||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  23838937 tatacaattaggtatctaaaggaacataaaacatgcatcaacgacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 23839036  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||||||||||| || |||| ||||||||| |||||  ||||||||     
T  23839037 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattc 23839135  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23839136 ccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 23839234  T
Q  509 tagtctcacccttacctta 527  Q
    |||||||||||||||||||    
T  23839235 tagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 9 - 280
Target Start/End: Original strand, 9187023 - 9187294
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||| ||||| ||||||||||| |  ||||  | ||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |    
T  9187023 gctcgctcattgttcgcttaagcgaactgacaaaacagaattctaggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccatt 9187122  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| ||||||||| ||||||| | || |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  9187123 catctgggcagtgcaaaaacctacgggtccaaacctcttctcgctccaaaaacccaattttaatcccctgatcacccaaaacgttttccaacagatgttt 9187222  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||    
T  9187223 acaggttctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaatt-cagatcattc 9187294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 9 - 280
Target Start/End: Complemental strand, 24513370 - 24513100
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||||||||||||||| |  ||||||| ||| | ||||||||||||||||||||||||||||||||| |  |||||||||||||||| |    
T  24513370 gctcgctcactgttcacttaagcgaactgacaaaatcgaattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccatt 24513271  T
Q  109 catctgggtagtgcaaaac-ctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| |||||||||  |||||| |||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  24513270 catctgggcagtgcaaaaatctacgggttca-acctcttctcactccaaaaacctaattttaatcccctgatcacccaaaacgttttccaacagatgttt 24513172  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    |||||| |  || |||||||| |||||||||||||||||| ||| |||||||||||||| || ||||||||||    
T  24513171 acaggttcattacacaactagacatctaaaggaacacaaaacaggcatcaacaacaacaatt-cagatcattc 24513100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 218 - 539
Target Start/End: Complemental strand, 10986497 - 10986169
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||| |||||||  | ||||||| |||||||||||||| |        ||||||||||||||     
T  10986497 tatacaattaggcatctaaaggaacataaaacatgcatcaagaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaa 10986398  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    || ||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||||||||||| || |||| ||||||||| |||||  ||||||||     
T  10986397 tcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattc 10986299  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| | |    
T  10986298 ccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaaga 10986200  T
Q  509 tagtctcacccttaccttagttttgcagaaa 539  Q
    ||||||||||||||||||||  |||||||||    
T  10986199 tagtctcacccttaccttagaattgcagaaa 10986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 218 - 527
Target Start/End: Original strand, 4477596 - 4477912
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | ||||||| |||||||||||||| |        || |||||||||||     
T  4477596 tatacaattagacatctaaaggaacataaaacacgcatcaacaacaacaaatacagatcactccaccatcatacaaatctttatcaaatcatccaatcaa 4477695  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||| |  ||||||||||||||||| ||||||| || |||| ||||||| | |||||  ||||||||     
T  4477696 tcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattc 4477794  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4477795 ccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 4477893  T
Q  509 tagtctcacccttacctta 527  Q
    |||||||||||||||||||    
T  4477894 tagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 9 - 525
Target Start/End: Complemental strand, 21565717 - 21565214
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| |||| |||| |||||||||||||| ||| ||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||            
T  21565717 gctcgctcacggttcgcttaagcgaacgggcaaa-tcgcattctgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag-------- 21565627  T
Q  109 catctgggtagtgca-aaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
               |||| ||||||||||||| ||  |||||||  ||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  21565626 -----------tgcagaaacctacggttttcaaccctcttcagactccaaaa-cccaattttaatcccctgatcacccaaaacgttttccagcagatgtt 21565539  T
Q  207 tacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aat 297  Q
    ||||||| ||||| |||||||| |||||||||| |||||||| ||| ||||||||||||||  | |||||||||||||||||||||| |        |||    
T  21565538 tacaggttctatacacaactagtcatctaaaggaaacacaaa-cagacatcaacaacaaca-atacagatcattccaccatcatacagaacttcatcaat 21565441  T
Q  298 tcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgat 397  Q
    ||||||||||| | || | |||||||||| |||||||||||||||||  |  ||||||| |||||||| |||| | | || |||| | ||||||| ||||    
T  21565440 tcatccaatcaattat-attttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgat 21565342  T
Q  398 cgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattat-g 496  Q
    | ||||||||| ||||| |||||||||||||||||||||||||||||||  |   ||| | || |||||||||||||||||| ||||||| | |||||      
T  21565341 cattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaaatattatct 21565243  T
Q  497 attattgagacatagtctcacccttacct 525  Q
    |||| ||||| ||||||||||||||||||    
T  21565242 attaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 394 - 596
Target Start/End: Complemental strand, 930228 - 930030
Alignment:
Q  394 tgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagatt 493  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| ||||||||    
T  930228 tgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagatt 930130  T
Q  494 atgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgc 593  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||| | |||||| | ||||| |||||||||||||||||||| ||| ||||| |    
T  930129 atgattattgagagatagtctcacccttaccttagttttgcag--aaaataagacagcaaggatcgg-ttctaggctctcctctcttgatcttgctcttc 930033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 58 - 266
Target Start/End: Complemental strand, 19471813 - 19471605
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactcca 155  Q
    |||| |||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| || |||| |||||  ||| |||||| ||||    
T  19471813 gcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcatccct-ttctcattcca 19471715  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||| ||| ||  |||    
T  19471714 aaa-cccaattttaatcccctgatcacccaaaatgttttccaacagatgtttacagattcaatatacaactaggcatctataggaacataaaacatacat 19471616  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  19471615 caacaacaaca 19471605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 20008474 - 20008250
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||    
T  20008474 gctcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaat 20008375  T
Q  109 catctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||   | ||||||    
T  20008374 catctgggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc-tgaaatgttt 20008276  T
Q  208 acaggtcctatatacaactaggcatc 233  Q
    ||  |||||||| ||||| |||||||    
T  20008275 acgagtcctatacacaaccaggcatc 20008250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 25396750 - 25396959
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactcca 155  Q
    |||| ||||||||||||||||||||| || |  |||||||||||||||| ||||||||| |||| |||| || |||| ||||| |||  |||||| ||||    
T  25396750 gcttacttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgtaaaaacttacgggtttcaaaccctttctcattcca 25396849  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| ||||||||||||  || |||||||||||| |||||||||||||||||||||||| |  || ||||||||||||||||||||||| ||| ||| |||    
T  25396850 aaa-cccaattttaatttcctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatctaaaggaacataaaacaggcat 25396948  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  25396949 caacaacaaca 25396959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 21364998 - 21364788
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| |||| |||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  21364998 tcactgttcgcttaggcgaacgggtaaaatcacattctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtctg 21364899  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || || | |||| ||||| ||| ||||| ||| |||||||||||||||||||||||||||||   |||||||||| |||||||   | ||||||||| ||    
T  21364898 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc-tgaaatgtttacaagt 21364800  T
Q  214 cctatatacaac 225  Q
    ||||| ||||||    
T  21364799 cctatgtacaac 21364788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 23968980 - 23968770
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| |||| |||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  23968980 tcactgttcgcttaggcgaacgggtaaaatcacattctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtctg 23968881  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || || | |||| ||||| ||| ||||| ||| |||||||||||||||||||||||||||||   |||||||||| |||||||   | ||||||||| ||    
T  23968880 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc-tgaaatgtttacaagt 23968782  T
Q  214 cctatatacaac 225  Q
    ||||| ||||||    
T  23968781 cctatgtacaac 23968770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 11289136 - 11288962
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| || |   ||||||||||||||| ||||||||| || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||    
T  11289136 gctcgcttaagcgatgggtagctcgcttaagcgaccactcatctgggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaatttt 11289037  T
Q  169 -aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca 243  Q
     ||||||| |||||||||||| ||||||||  | ||||||||| |||||||| ||||||||||||| |||||||||    
T  11289036 taatcccctgatcacccaaaacgttttccagaa-atgtttacaagtcctatacacaactaggcatcaaaaggaaca 11288962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 19300211 - 19300083
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||||| ||||||||| || | |||| |||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||| |    
T  19300211 tcgcttaagcgaccactcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatca-ccaaaacg 19300113  T
Q  191 ttttccaacagatgtttacaggtcctatat 220  Q
    ||||||| || |||||||||||||||||||    
T  19300112 ttttccagcaaatgtttacaggtcctatat 19300083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 31252012 - 31252187
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtg-caaaacctacggtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||||||    |||||||||||||||| ||||||||  || |  ||||| |||| |||||||| |||   ||||||||||||||| ||||    
T  31252012 gctcgcttaagcgacgggatgttcgcttaagcgaccactcatctggacagggtaaaaacttacgatttcagacttctctccactccaaaaacccagtttt 31252111  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacac 244  Q
    ||||||| ||||||||||||  ||||||| |   ||||||||||| ||||| |||||||| |||| ||||||||||    
T  31252112 aatcccctgatcacccaaaacattttccagcgattgtttacaggttctatacacaactagtcatcgaaaggaacac 31252187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 70 - 266
Target Start/End: Complemental strand, 9099536 - 9099341
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| ||||||||| |  | || | |||||  |||||||| ||| ||||||||||||||||||||||    
T  9099536 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcatggtaacagctacgattttcagacttctcctcactccaaaaacccaatttt 9099437  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca-caaatcagccatcaacaacaaca 266  Q
    ||||||| ||||||||||||||||||||   | ||||||||  |||||||||||||| || |||| |||| |||| ||||| || ||||||||||||||    
T  9099436 aatcccctgatcacccaaaatgttttcc-tgaaatgtttacgagtcctatatacaaccagacatc-aaagaaacagcaaattag-catcaacaacaaca 9099341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 70 - 266
Target Start/End: Original strand, 29097455 - 29097650
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| ||||||||| || | || | ||||| ||| ||||| ||| |||||||||||||| |||||||    
T  29097455 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaacagctacgattttcagacttctcctcactccaaaaactcaatttt 29097554  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaac-acaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||| |||||||   | ||||||||  |||||||||||||| || |||| |||| ||| |||||| || ||||||||||||||    
T  29097555 aatcccctgatcacccaaaaggttttcc-tgaaatgtttacgagtcctatatacaaccagacatc-aaagaaacaacaaattag-catcaacaacaaca 29097650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 15458134 - 15458257
Alignment:
Q  123 aaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatac 222  Q
    ||||| |||| |||||||| |||   |||||||||||||||||||||||||||||||| ||||||| |||||||| |   |||||||||| | |||| ||    
T  15458134 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacac 15458233  T
Q  223 aactaggcatctaaaggaacacaaa 247  Q
    ||||||||||| ||| |||||||||    
T  15458234 aactaggcatc-aaaagaacacaaa 15458257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 15464729 - 15464852
Alignment:
Q  123 aaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatac 222  Q
    ||||| |||| |||||||| |||   |||||||||||||||||||||||||||||||| ||||||| |||||||| |   |||||||||| | |||| ||    
T  15464729 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacac 15464828  T
Q  223 aactaggcatctaaaggaacacaaa 247  Q
    ||||||||||| ||| |||||||||    
T  15464829 aactaggcatc-aaaagaacacaaa 15464852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 472 - 581
Target Start/End: Complemental strand, 24512899 - 24512792
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctc 571  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||| ||||||| ||||||| ||| |||  ||||||  |||||||| ||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcag-aaagattgcacagca-aaatcggttcctaggctc 24512802  T
Q  572 tcctctcttg 581  Q
    | ||||||||    
T  24512801 ttctctcttg 24512792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 527
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  475 ttttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||  |||| ||||||||||| ||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||| || | ||| |||||||||| ||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 525
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacct 525  Q
    |||||||||||||| |||| |||||||| |||||||  |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 2287103 - 2287039
Alignment:
Q  202 atgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  2287103 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 2287039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 572
Target Start/End: Original strand, 19819889 - 19819946
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctct 572  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||||||| || ||||||    
T  19819889 ctcacccttaccttagttttgcagaaaaaattgcacagca--aatcggttccttggctct 19819946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||||||| || ||||  ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 31252408 - 31252478
Alignment:
Q  458 ctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    |||| ||||||| | ||||||||||||||||| ||||| || ||| | | ||| |||||||||||||||||    
T  31252408 ctattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 527
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||| |||||||| || ||||  ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 714 - 1301
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  714 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagagacggctgcttcgcttaagcgaccaatcatctg 813  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  814 ggcagtgcaaaaacctacgatttcaaacctcttctcactccaaaaacccaattttaatcccccaattacccaaaatgttttccagcagatgtttacaggt 913  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc--------caa 305  Q
    |||||||||||||| |||||||| |||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||        |||    
T  914 cctatatacaactaagcatctaagggaacacaaa-cagccattaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaa 1012  T
Q  306 tcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttaccc 405  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  1013 tcactcataaatttcaatcaatttatgatcacagcaacaacaag-attaagttttcattctgaacattatattacaagagaattaacatgatcattaccc 1111  T
Q  406 atttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgag 505  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  1112 atttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgag 1210  T
Q  506 acatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    | |||||||||||||||||||||||||||  ||||||| | |||||| | ||||| |||||||||||||||||||| ||| ||||| |||||||    
T  1211 agatagtctcacccttaccttagttttgc--aaaaaataagacagcaaggatcgg-ttctaggctctcctctcttgttcttgctcttcttctcc 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 378; Significance: 0; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 15 - 599
Target Start/End: Complemental strand, 8046353 - 8045764
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8046353 tcacggttcgcttaagcgaacgggtaaaatcgcattctaggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 8046254  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8046253 ggcagtgcaaaaacctacggtttcagacctctcctcactccaaaaatccaattttaatcccccgatcacccaaaatgttttccagcagatgtttacaggt 8046154  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaatt--------catccaa 305  Q
    |||||||||||||| |||||||| | |||||| | || |||| |||| ||||| || ||||||||||||||||||||||||||||        |||||||    
T  8046153 cctatatacaactaagcatctaaggaaacacagaacaaccattaacagcaacaattacagatcattccaccatcatacacaaattcatcaattcatccaa 8046054  T
Q  306 tcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttaccc 405  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||    
T  8046053 tcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattacaagagaattaacattatctttaccc 8045954  T
Q  406 atttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgag 505  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||    
T  8045953 atttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgag 8045855  T
Q  506 acatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    | |||||||||||||||||||||||||||||  ||||| | |||||| | ||||| |||||||||||| ||||||| ||| ||||| |||||||    
T  8045854 agatagtctcacccttaccttagttttgcag--aaaataagacagcaaggatcgg-ttctaggctctcatctcttgttcttgctcttcttctcc 8045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 9 - 599
Target Start/End: Original strand, 11847633 - 11848237
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcatta-taggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaa 107  Q
    ||||| ||||||||| ||||||||||| || ||||||| |||  | ||  ||||||||||||||||||||||||||||| |   ||||||||||||||      
T  11847633 gctcgctcactgttcgcttaagcgaacaggcaaaatcgtatttctgggtggcttgcttgaatgctcgcttaagcgacgggtagctcgcttaagcgaccgc 11847732  T
Q  108 tcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
    ||||||||| || | |||| |||||  |||||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  11847733 tcatctgggcagggtaaaaacctacaatttcagacttctcctcactccaaaaacccaatttcaatcccctgatcacccaaaatgttttctaacagatgtt 11847832  T
Q  207 tacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaa-caacaacatttgcagatcattccaccatcatacaca--------aat 297  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||| |||||| |||||||| || |||||||||||| |||||||||||        |||    
T  11847833 tacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatcaaccaacaacaattacagatcattccatcatcatacacaaattcatcaat 11847932  T
Q  298 tcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgat 397  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | || || |||||| ||||    
T  11847933 tcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataaaaggattaacatgat 11848032  T
Q  398 cgttacccatttcccttcagaatcatcatcaaaccctaaccctcaa------tttattttccaaagctatgcaattaggtcaattttcagaaattataga 491  Q
    | ||||||||| | |||||||||| |||||||||||||||||||||      || ||||| |||| |||||| | ||||||||||||||| |||||||||    
T  11848033 cattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaattttcaggaattataga 11848132  T
Q  492 ttatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctct 591  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||| ||||||| |||||||||||||||||| | |||||||||    
T  11848133 ttatgattattgagagatagtctcacccttaccttagttttgcag--aaaattagacagcaagaatcgg-ttctaggctctcctctctagctctggctct 11848229  T
Q  592 gcttctcc 599  Q
     |||||||    
T  11848230 tcttctcc 11848237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 9 - 280
Target Start/End: Original strand, 15407666 - 15407937
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| ||||||||||| |  ||||||||||| | |||||||||||||||||||| |||||||||||| |  |||||||||||||||| |    
T  15407666 gctcgctcactgttcgcttaagcgaactgacaaaatcgcattctgggcagcttgcttgaatgctcacttaagcgacgggtcgttcgcttaagcgaccatt 15407765  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  15407766 catctgggcagtgcaaaaacctacgggttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgttt 15407865  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||| |||||| ||||||| || ||||||||||    
T  15407866 acaggtcctatacacaactaggcatcgaaaggaacacaaaacaggcatcaaaaacaacaatt-cagatcattc 15407937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 15 - 528
Target Start/End: Original strand, 53483238 - 53483760
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaa-tcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 113  Q
    |||| |||| |||||||||||||| |||| ||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||    
T  53483238 tcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtct 53483337  T
Q  114 gggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    ||  ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  53483338 ggacagtgcaaaacctacggtttcagaccacttctcactccaaaaactccattttaatcccctgattacccaaaatatattccaacagatgtttacaggt 53483437  T
Q  214 cctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc---- 307  Q
    || ||||||||||||||| | ||||| ||||||| ||| ||||||||| ||||| |  ||| ||||| | | |||||| |||| ||||||| | ||        
T  53483438 ccaatatacaactaggcattataaagaaacacaattcaaccatcaacagcaacaatcacagaatcatcctatcatcatccacatattcatcaattcatac 53483537  T
Q  308 -actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttac 403  Q
     | ||||  ||| |||| ||||    | |||  | ||||||||| |||||||||||||||||| ||| ||| ||    ||| || |||| | ||| ||||    
T  53483538 aattcatcaaaaattcagtcaataagtggattgcggcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttac 53483637  T
Q  404 ccatttcccttcagaatcatcatcaaaccctaaccctca-atttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattatt 502  Q
     ||||  || |||||||||||||||||||||||   ||| |||  ||||| ||| |||| |||||||||||| |||||| ||||||||||||||||||||    
T  53483638 tcatt--ccatcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattatt 53483734  T
Q  503 gagacatagtctcacccttaccttag 528  Q
    |||| |||||||||||||||||||||    
T  53483735 gagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 54 - 266
Target Start/End: Original strand, 14486233 - 14486446
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcact 152  Q
    ||||||| |||||||||||||||||||||| || |  |||||||||||||||| ||||||||| || |||||| ||||||| ||||||||||||||||||    
T  14486233 ggcagctagcttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccactcatctgggcagggcaaaaacctacgggttcagacctcttctcact 14486332  T
Q  153 ccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagc 252  Q
    |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||   ||  |||||||| |||||||||||||||||| |||     
T  14486333 ccaaaaactcaattttaatcccctgatcaaccaaaatgatttccaacagatgtttacaggtttaatgcacaactagacatctaaaggaacacaaaacaga 14486432  T
Q  253 catcaacaacaaca 266  Q
    ||||||||||||||    
T  14486433 catcaacaacaaca 14486446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 16147357 - 16147123
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcatta-taggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaa 107  Q
    ||||| ||||||||| |||||||||||||||||||||  |||  | |||||||  | |||||| ||||||||||||||| |||||||||||||||||||     
T  16147357 gctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagcta-catgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccac 16147259  T
Q  108 tcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
    ||||||||| || | ||||  |||| ||| ||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| | | |||||    
T  16147258 tcatctgggcagggtaaaagttacgattttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttcc-agaaatgtt 16147160  T
Q  207 tacaggtcctatatacaactaggcatctaaaggaaca 243  Q
    |||| |||||||||||||  || |||| |||||||||    
T  16147159 tacaagtcctatatacaatcagacatcaaaaggaaca 16147123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 27905877 - 27906032
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||||| | ||| ||| || |||||| |||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |    
T  27905877 tcgcttaagcgaccacttatccgggcagggcaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacg 27905976  T
Q  191 ttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||| ||  ||||||||||||||||| ||||||||||||| |||||||||||||    
T  27905977 ttttccagca-ttgtttacaggtcctatacacaactaggcatcgaaaggaacacaaa 27906032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 72 - 266
Target Start/End: Original strand, 8834486 - 8834681
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactccaaaaacccaatttta 169  Q
    ||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||    ||||||| |||  || ||| ||||||| ||||||||||    
T  8834486 tcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattccaaaa-cccaatttta 8834584  T
Q  170 atcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| |||||||||||| || |||||  |||||||||||||| |  || ||||  ||||||||||||||||||||| ||  ||||||||||||||    
T  8834585 atcccctgatcacccaaaacgtattccagaagatgtttacaggttcattacacaataaggcatctaaaggaacacaaaacatgcatcaacaacaaca 8834681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 13888219 - 13888405
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa--cctacggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| |||||||||   ||  ||||||| |||  || ||| |||     
T  13888219 gcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattcc- 13888317  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca 243  Q
    |||||||||||||||||||| ||||||||||||  | |||||| ||| |||||||||| |  |||| ||  |||||||||||||||||    
T  13888318 aaaacccaattttaatcccctgatcacccaaaacatattccaaaagacgtttacaggttcagtatataataaggcatctaaaggaaca 13888405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 59 - 266
Target Start/End: Original strand, 15244793 - 15245001
Alignment:
Q  59 cttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa--cctacggtttcagacctcttctcactccaa 156  Q
    ||||||||||| |||||||||||||||| |  |||||||||||||||| ||||||||| |||||||||   ||  ||||||| | |  || ||| ||| |    
T  15244793 cttgcttgaattctcgcttaagcgacgggtcattcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaatcctttttcattcc-a 15244891  T
Q  157 aaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatc 256  Q
    ||||||||||||||||||| |||||||||||| || |||||  |||||||||||||| |  |||| ||  || |||||||| ||||| ||||||  ||||    
T  15244892 aaacccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttcagtatataataagccatctaaacgaacataaatcatgcatc 15244991  T
Q  257 aacaacaaca 266  Q
    ||| ||||||    
T  15244992 aaccacaaca 15245001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 13887362 - 13887548
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa--cctacggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||||||||||||| | |  |||||||||||||||| ||||||||| |||||||||   ||  ||||||| |||  || ||| |||     
T  13887362 gcttgcttgaatgctcgcttaagcgacaggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattcc- 13887460  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca 243  Q
    |||||||||||||||||||| |||||||||||| || |||||  ||| ||||||||||    |||| ||  |||||||||||||||||    
T  13887461 aaaacccaattttaatcccctgatcacccaaaacgtattccagaagacgtttacaggtttagtatataataaggcatctaaaggaaca 13887548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 58 - 250
Target Start/End: Original strand, 15307697 - 15307890
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||||||||||| | | |  ||||||||||||| || ||||||||| ||||||||| ||    ||||||| |||  || ||| ||||    
T  15307697 gcttgcttgaatgctcgcttaagcgtcaggtcgttcgcttaagcgatcattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattcca 15307796  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatca 250  Q
    | | |||||||||||||||| |||||||||||| || |||||  |||||||||||||| |  |||| ||  ||||||||||||||||| ||||||    
T  15307797 ata-cccaattttaatcccctgatcacccaaaacgtattccagaagatgtttacaggttcagtatataataaggcatctaaaggaacataaatca 15307890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 539
Target Start/End: Original strand, 15408139 - 15408206
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaa 15408206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttacct 525  Q
    ||||||||||||||||| |||||||| |||||   ||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||| ||| |||||||  ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 14911802 - 14911865
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  14911802 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 14911865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 522
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcaccctta 522  Q
    |||||||||||||||| || | ||| |||||||||| |||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 1650219 - 1650182
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaattatacag 550  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  1650219 ctcacccttaccttagttttgcagaaagaattacacag 1650182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  492 ttatgattattgagacatagtctcacccttaccttagttttg 533  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 581
Target Start/End: Original strand, 14063730 - 14063798
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttg 581  Q
    |||||||||||||||| |||||||||| ||||  ||||||  |||||||| || |||||| ||| ||||    
T  14063730 ctcacccttaccttagatttgcagaaagaattgcacagcaaaaatcggttccttggctcttctcccttg 14063798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 541
Target Start/End: Original strand, 14507215 - 14507243
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaa 541  Q
    |||||||||||||||||||||||||||||    
T  14507215 ctcacccttaccttagttttgcagaaaaa 14507243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||| ||| |||||||  ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 18213504 - 18213552
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  18213504 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 18213552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 49715 - 50302
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49715 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagagacggctgcttcgcttaagcgaccaatcatctg 49814  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||    
T  49815 ggcagtgcaaaaacctacgatttcaaacctcttctcactccaaaaacccaattttaatcccccaattacccacaatgttttccagcagatgtttacaggt 49914  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc--------caa 305  Q
    |||||||||||||| |||||||| |||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||        |||    
T  49915 cctatatacaactaagcatctaagggaacacaaa-cagccattaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaa 50013  T
Q  306 tcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttaccc 405  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  50014 tcactcataaatttcaatcaatttatgatcacagcaacaacaag-attaagttttcattctgaacattatattacaagagaattaacatgatcattaccc 50112  T
Q  406 atttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgag 505  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  50113 atttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgag 50211  T
Q  506 acatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    | |||||||||||||||||||||||||||  | ||||||| |||||| | ||||| |||||||||||||||||||| ||| ||||| |||||||    
T  50212 agatagtctcacccttaccttagttttgc--ataaaattagacagcaaggatcgg-ttctaggctctcctctcttgttcttgctcttcttctcc 50302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 15 - 599
Target Start/End: Complemental strand, 1272 - 682
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| ||| |||||||||||||||||||||| | ||||| || ||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  1272 tcacggttcgcttgagcgaacgggtaaaatcgcattctgggcagtttccttgaatgctcacttaagcgacggatgcttcgcttaagcgaccaatcatctg 1173  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactcca-aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1172 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaaaccaattttaatcccccaatcacccaaaatgttttccagcagatgtttacaggt 1073  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaa 305  Q
    |||||||||||||| |||||||| | |||| ||| || |||| |||||||||| |  || ||| |||||||||||||||||        |||||||||||    
T  1072 cctatatacaactaagcatctaaggaaacataaaacaaccattaacaacaacaatcacaaatctttccaccatcatacacaaattcatcaattcatccaa 973  T
Q  306 tcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttaccc 405  Q
    ||||||||||||||||||||  ||||||||||| ||||||||| ||||||||||| || ||||||||||||| ||||||| |||| | ||||| ||||||    
T  972 tcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatattacaagagtattatcatgatcattaccc 874  T
Q  406 atttcccttcagaatcatcatcaaaccctaaccctcaatttattttcc-aaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  873 atttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattga 774  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||||||  ||||| | |||||| | ||||| |||||| |||| |||||||| ||| ||||| |||||||    
T  773 gagatagtctcacccttaccttagttttgcag--aaaataagacagcaaggatcgg-ttctagactcttctctcttgttcttgctcttcttctcc 682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 328; Significance: 0; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 25 - 599
Target Start/End: Complemental strand, 9086 - 8508
Alignment:
Q  25 cttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgac-ggctgcttcgcttaagcgaccaatcatctgggtagtgca 123  Q
    |||||||||||||||||||||||||| | ||||  || |||||||||||||||||||||  || |||||||||||||| |||||||||||||| ||||||    
T  9086 cttaagcgaacgggtaaaatcgcattctgggcaatttccttgaatgctcgcttaagcgaatgggtgcttcgcttaagcaaccaatcatctgggcagtgca 8987  T
Q  124 aaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatataca 223  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  8986 aaacctacggtttcagacctcttctcactccaaaaactcaattttaatcccccaatcacccaaaatgttttccagcatatgtttacaggtcctatataca 8887  T
Q  224 actaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc--------caatcactcata 314  Q
    |||||||| | ||| | ||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||        |||||||| ||     
T  8886 actaggcattttaatgaaacacaattcagccatcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcacttatc 8787  T
Q  315 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttccctt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||| | ||| |||||||||  || |    
T  8786 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccat 8689  T
Q  415 cagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaa-ttttcagaaattatagattatgattattgagacatagtc 513  Q
    || |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  8688 cataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtc 8589  T
Q  514 tcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    |||||||||||||||||||||||   |||||| |||||| | ||||| ||||||||||| || ||||| ||| ||||| |||||||    
T  8588 tcacccttaccttagttttgcag---aaattagacagcaaggatcgg-ttctaggctct-ctttcttgttcttgctcttcttctcc 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 103 - 599
Target Start/End: Complemental strand, 2330 - 1831
Alignment:
Q  103 accaatcatctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacaga 202  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  2330 accaatcatctgggcagtgcaaaacctacggtttcagacctcttctcactccaaaaactcaattttaatcccccaatcacccaaaatgttttccagcaga 2231  T
Q  203 tgtttacaggtcctatatacaactaggcatct-aaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcat 301  Q
    |||||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  2230 tgtttacaggtcctatatacaactaggcattttaaagaaacacaattcagccatcaacaacaacatttacagattattccaccatcgtacacaaattcat 2131  T
Q  302 c--------caatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacc 393  Q
    |        ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||     
T  2130 caattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattacaagagaattaaca 2031  T
Q  394 tgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaa-ttttcagaaattatagat 492  Q
    | ||| |||||||||  || ||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  2030 taatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagat 1933  T
Q  493 tatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctg 592  Q
    |||||||||||||| |||||||||||||||||||||||||||||   |||||| |||||| | ||||| ||||||||||| || ||||| ||| |||||     
T  1932 tatgattattgagatatagtctcacccttaccttagttttgcag---aaattagacagcaaggatcgg-ttctaggctct-ctttcttgttcttgctctt 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 15 - 525
Target Start/End: Original strand, 24192488 - 24193009
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  24192488 tcactgtttgcttaagcgaacgggaaaaatcgcattatgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaagcgaccaatcatctg 24192587  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  24192588 ggcagtgcaaaaacctacgatttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttacaggt 24192687  T
Q  214 cctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcata--------cacaaattcatcca 304  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| |  | ||||||||||||||||||||        ||  |||| |||||    
T  24192688 cctatatacaactaggcatctaaaggaaacacaaaacagccatcaacaacaagaaatacagatcattccaccatcataccaatattcatcaatttatcca 24192787  T
Q  305 atcactcataaatttcaatcaagttatga-tcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttac 403  Q
    |||| |||| | |||||||||  |||||| ||||||||||| ||  ||||||||||||||||||||||| | || |||| ||||||||| ||||| ||||    
T  24192788 atcaatcat-attttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattac 24192886  T
Q  404 ccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttcc-aaagctatgcaattaggtcaattttcagaaattatagattatgattatt 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24192887 ccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattatt 24192986  T
Q  503 gagacatagtctcacccttacct 525  Q
    |||| ||||||||||||||||||    
T  24192987 gagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 20 - 599
Target Start/End: Complemental strand, 41455612 - 41455028
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||    
T  41455612 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggattcttcgcttaagcgaccactcatctgggcag 41455513  T
Q  120 tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctata 219  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  41455512 tgtaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccgaaatgttttccaacagatgtttacaggtcctata 41455413  T
Q  220 tacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatcactca----- 312  Q
    |||||||||||| | ||||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| | |  |  ||||| | ||| |||         
T  41455412 tacaactaggcattataaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacataatatctcatcaattcattcaaatca 41455313  T
Q  313 --taaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
       ||| ||||||||| | || ||| |||||||| | | |||||||| |||||||||  |||||| ||  ||||| || |||| | ||| |||| ||||     
T  41455312 tccaaaattcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt- 41455214  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
     || |||||||||||||||| ||||||   |||   ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  41455213 -ccatcagaatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattgagagat 41455116  T
Q  510 agtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    |||||||||||||||||||||||||||  ||| ||| ||| || | |||| |||||||||| |||||||| | ||| ||||| |||||||    
T  41455115 agtctcacccttaccttagttttgcag--aaagttagacaacaaggatcgatttctaggctttcctctctagctcttgctcttcttctcc 41455028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 218 - 525
Target Start/End: Complemental strand, 20248098 - 20247791
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatccaatcactcataaat 317  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  20248098 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccatcatacacaaattcatccaatcactcataatt 20247999  T
Q  318 ttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcag 417  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  20247998 ttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcag 20247899  T
Q  418 aatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcac 517  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20247898 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 20247799  T
Q  518 ccttacct 525  Q
    ||||||||    
T  20247798 ccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 20 - 528
Target Start/End: Complemental strand, 24934343 - 24933828
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||    
T  24934343 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcag 24934244  T
Q  120 tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctata 219  Q
    |||||||| |||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24934243 tgcaaaacatacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacatgtcctata 24934144  T
Q  220 tacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatcactca----- 312  Q
    ||||||||||||   ||||| ||||||| ||| ||||||||| ||||| || ||| ||||||| ||||||||||| | ||||||| | |||  ||         
T  24934143 tacaactaggcacaataaagaaacacaattcaaccatcaacagcaacaattacagaatcattctaccatcatacaaatattcatcaattcatacaataca 24934044  T
Q  313 --taaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
       ||| ||||||||| | || |||  ||||||||||| |||||||| ||||||||| ||||||| ||  | ||| || |||| | ||| |||| ||||     
T  24934043 tcaaaaattcaatcaattaatggattgcagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt- 24933945  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
     || |||||||||||||||||||||||   |||  |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  24933944 -ccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattgagagat 24933847  T
Q  510 agtctcacccttaccttag 528  Q
    |||||||||||||||||||    
T  24933846 agtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 218 - 540
Target Start/End: Complemental strand, 14763075 - 14762745
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc--------caatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||| ||||||||||||||||||||||||        |||||||    
T  14763075 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcactccaccatcatacacaaattcatcaattcatccaatcac 14762976  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  14762975 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 14762876  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  14762875 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagat 14762776  T
Q  510 agtctcacccttaccttagttttgcagaaaa 540  Q
    |||||||||||||||||| ||| | ||||||    
T  14762775 agtctcacccttaccttaatttagaagaaaa 14762745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 218 - 525
Target Start/End: Complemental strand, 38311117 - 38310802
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatcca--------atcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || |||||||||||||| |||||||||||||||||||        |||||    
T  38311117 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccttcatacacaaattcatccattcatccaatcac 38311018  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  38311017 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 38310918  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||    
T  38310917 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagat 38310818  T
Q  510 agtctcacccttacct 525  Q
    ||||||||||||||||    
T  38310817 agtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 10389966 - 10389751
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10389966 tcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctg 10389867  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10389866 ggcagtgcaaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtc 10389767  T
Q  215 ctatatacaactaggc 230  Q
    ||||||||||||||||    
T  10389766 ctatatacaactaggc 10389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 10415055 - 10414840
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10415055 tcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctg 10414956  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10414955 ggcagtgcaaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtc 10414856  T
Q  215 ctatatacaactaggc 230  Q
    ||||||||||||||||    
T  10414855 ctatatacaactaggc 10414840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 10421725 - 10421510
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10421725 tcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctg 10421626  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10421625 ggcagtgcaaaacctacggtttcagactccttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaatagatgtttacaggtc 10421526  T
Q  215 ctatatacaactaggc 230  Q
    ||||||||||||||||    
T  10421525 ctatatacaactaggc 10421510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 15 - 538
Target Start/End: Complemental strand, 16801987 - 16801457
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||| | ||||||| ||| | ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||    
T  16801987 tcacagttcgcttaagcgaacgcgcaaaatcgtattctgggcagtttgcttgaatgctcgcttaagcgacgggtccttcgcttaagcgaccattcatctg 16801888  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||| ||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  16801887 ggcagtacaaaaacctacgatttcatacctcttctcactccaaaaacccaactttaatcccctgatcacttaaaatgttttccagcagatgtttacaggt 16801788  T
Q  214 cctatatacaactaggcatct-aaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcata--------cacaaattcatcca 304  Q
     ||||||||||||| |||||| ||||| | ||||| ||| |||||||||||||| || ||||| |||| || ||||||        ||| ||||||||||    
T  16801787 tctatatacaactaagcatctaaaagggatacaaaacaggcatcaacaacaacaatt-cagattattctacaatcatacaaaacttcaccaattcatcca 16801689  T
Q  305 atcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
      || |  |||| |||| |||| || |||||||| ||  |  |  | |||||  |||||||| ||||| | || |||  | | ||||| ||||| ||||     
T  16801688 tccaattctaaa-ttcattcaaattgtgatcacaacattattataggttaagaattcattctaaacatcacattacagcatatttaacatgatcattaca 16801590  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaa-tttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattg 503  Q
    |  ||| | ||| |||||||||| |||||||||| |||| ||||| ||| ||||||| ||||| |||||||||||||||||||||| | |||||||||||    
T  16801589 ccattctcctcaaaatcatcatc-aaccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatata-tatgattattg 16801492  T
Q  504 agacatagtctcacccttaccttagttttgcagaa 538  Q
    ||| |||||||||||||||||||||||||||||||    
T  16801491 agagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 218 - 527
Target Start/End: Original strand, 9534067 - 9534382
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  9534067 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 9534166  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||  |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  ||||||||     
T  9534167 tcataa-tttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattc 9534265  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    | || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9534266 cact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 9534364  T
Q  510 agtctcacccttacctta 527  Q
    ||||||||||||||||||    
T  9534365 agtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 72 - 525
Target Start/End: Complemental strand, 55499569 - 55499104
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgca-aaacctacggttt-cagacctcttctcactccaaaaacccaatttta 169  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||| ||  ||||||| |||||||||| ||||||||||    
T  55499569 tcgcttaagtgacggctggttcgcttaagcgaccattcatctgggcagtgcagaaacctacggttttcaaccctcttcacactccaaaa-cccaatttta 55499471  T
Q  170 atcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactag----gcatctaaagg-aacacaaatcagccatcaacaacaa 264  Q
    |||||| |||||||||||| |||||||| ||||||||||||||| ||||| ||||||||    ||||||||||| |||||||| ||| ||||||||||||    
T  55499470 atcccctgatcacccaaaacgttttccagcagatgtttacaggttctatacacaactagctatgcatctaaaggaaacacaaa-cagacatcaacaacaa 55499372  T
Q  265 catttgcagatcattccaccatcatacaca--------aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaag 356  Q
    ||  | |||||||||||||||||||||| |        |||||||||||||| | || | |||||||||| ||||||||||||||||   |  |||||||    
T  55499371 ca-atacagatcattccaccatcatacaaaacttgatcaattcatccaatcaattat-attttcaatcaatttatgatcacagcaactgtatagattaag 55499274  T
Q  357 ttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaa 456  Q
     |||||||| |||||| | || |||| | ||||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||||||||  |   |||     
T  55499273 atttcattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaag 55499175  T
Q  457 gctatgcaattaggtcaatttt-cagaaattatagattat-gattattgagacatagtctcacccttacct 525  Q
    | || ||| ||||||||||||| | ||||||| | |||||  |||| ||||| ||||||||||||||||||    
T  55499174 gttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 230 - 528
Target Start/End: Complemental strand, 23370810 - 23370505
Alignment:
Q  230 catctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcactcataaatttca 321  Q
    |||||||||||||| ||| ||  ||||||||||||||  | ||||||| |||||||||||||| |        |||||||||||||| |||||| |||||    
T  23370810 catctaaaggaacataaaacacgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttca 23370712  T
Q  322 atcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatc 421  Q
    ||||| ||||||||||| |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  |||||||| |||| |||||||    
T  23370711 atcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatc 23370613  T
Q  422 atcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcaccct 520  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  23370612 atcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccaccct 23370513  T
Q  521 taccttag 528  Q
    ||||||||    
T  23370512 taccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 17241032 - 17240768
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||   |||||  | ||||| |||||||||||||||||||| |||||||||||| |  |||||||||||||||| |||||||    
T  17241032 tcacagttcgcttaagcgaacttctaaaacagaattatgggcagcttgcttgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattcatctg 17240933  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    |  ||||||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  17240932 gacagtgcaaaaacctacgggttcaaacctcttctcactccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggt 17240834  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
     | ||| |||||||||||||||||||||  |||| ||| |||||||||||||| || ||||||||||    
T  17240833 tcaatacacaactaggcatctaaaggaattcaaaacaggcatcaacaacaacaatt-cagatcattc 17240768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 13313368 - 13313164
Alignment:
Q  63 cttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacc 161  Q
    ||||||||||||||||||||| || |  |||||||||||||| | ||||||||| ||  ||||| ||||||| || ||||||||||||||||||||||||    
T  13313368 cttgaatgctcgcttaagcgatgggtcgttcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctcactccaaaaacc 13313269  T
Q  162 caattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaa 261  Q
    |||||||||||||| ||| |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  13313268 caattttaatcccctgatgacccaaaacgttttccagcaaatgtttacaggtcctatatacaactatgcatctaaaggaacacaaaacaggcatcaacaa 13313169  T
Q  262 caaca 266  Q
    |||||    
T  13313168 caaca 13313164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 92 - 266
Target Start/End: Complemental strand, 13302683 - 13302508
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||| | ||||||||| ||  ||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  13302683 tcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacg 13302584  T
Q  191 ttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  13302583 ttttccagcaaatgtttacaggtcctatatacaactaggcatctaaaggaacacaaaacaggcatcaacaacaaca 13302508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 13324260 - 13324056
Alignment:
Q  63 cttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacc 161  Q
    |||||||||||||||||||||  | |  |||||||||||||||| |||| |||| || |||||| ||||||| |||||||||||||||||||||||||||    
T  13324260 cttgaatgctcgcttaagcgattggtcgttcgcttaagcgaccactcatttgggcagggcaaaaacctacgggttcagacctcttctcactccaaaaacc 13324161  T
Q  162 caattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaa 261  Q
    ||  |||||||||| |||||||||||| |||||||| || ||||||| |||| ||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  13324160 catatttaatcccctgatcacccaaaacgttttccagcaaatgtttataggtgctatatacaaccaggcatctaaaggaacacaaaacaggcatcaacaa 13324061  T
Q  262 caaca 266  Q
    |||||    
T  13324060 caaca 13324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 17131265 - 17131448
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaa-tcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 113  Q
    ||||||||| ||||||||||||||||||| || |||| | || || |  | |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  17131265 tcactgttcgcttaagcgaacgggtaaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatct 17131364  T
Q  114 gggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    ||| || | |||| |||||  |||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  17131365 gggcagggtaaaagctacgattttcagacttctcctcactccaaaaatccaattttaatcccctgatcacccaaaacgttttcc 17131448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 75 - 264
Target Start/End: Original strand, 18928837 - 18929027
Alignment:
Q  75 cttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgc-aaaacctac-ggtttcagacctcttctcactccaaaaacccaattttaatc 172  Q
    |||||||||||| |  |||||||||||||||| |||| |||   | || ||||||||| ||||||| |||  |||||||||| ||||| |||||||||||    
T  18928837 cttaagcgacgggtcgttcgcttaagcgaccattcatttggactgagcaaaaacctacgggtttcaaaccctttctcactcc-aaaacacaattttaatc 18928935  T
Q  173 ccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaa 264  Q
    ||| ||||||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||| ||||||||    
T  18928936 ccctgatcacccaaaatgtttcctaacagatgtttacaggtccaatacacaactaggcatctaaaggaacacaaaacaggcattaacaacaa 18929027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 9 - 224
Target Start/End: Original strand, 14865374 - 14865589
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcatta-taggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaa 107  Q
    ||||| ||||||||| |||||||||||||||||||||  |||  | |||||||  | |||||| ||||||||||||||| | |||||||||||||||||     
T  14865374 gctcgctcactgttcgcttaagcgaacgggtaaaatctaatttctgggcagcta-catgaatgttcgcttaagcgacgggtacttcgcttaagcgaccac 14865472  T
Q  108 tcatctgggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
    || ||||||  | | ||||  ||||  |||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||| | | | |||||    
T  14865473 tcttctgggcggggtaaaagttacgattttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgtttt-ctagaaatgtt 14865571  T
Q  207 tacaggtcctatatacaa 224  Q
    |||| |||||||||||||    
T  14865572 tacaagtcctatatacaa 14865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 12033963 - 12033714
Alignment:
Q  17 actgttcacttaagcgaacgggtaaaatcgcattatagg-cagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgg 115  Q
    ||||||| |||||||||||||||||||||  ||| | || |||||  | |||||| ||||||||||||||| |||||| ||||||||||| |||||||||    
T  12033963 actgttcgcttaagcgaacgggtaaaatctaatttttgggcagcta-catgaatgttcgcttaagcgacggatgcttctcttaagcgaccgatcatctgg 12033865  T
Q  116 gtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaa-ttttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    |||| | |||| |||||  |||||||| ||| || ||||||||||||||| ||||||||||  |||||||||||| |||||||   | ||||||||| ||    
T  12033864 gtagggtaaaagctacgattttcagacttctcctaactccaaaaacccaatttttaatcccatgatcacccaaaacgttttcc-tgaaatgtttacaagt 12033766  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| ||||| |  |||| ||||||||| |||  |  ||||||||||||||    
T  12033765 cctatacacaaccaaacatc-aaaggaacagaaactaaacatcaacaacaaca 12033714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 70 - 266
Target Start/End: Complemental strand, 19235533 - 19235338
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| ||||||||| || | || | ||||| ||| ||||| ||| ||||||||||||||||||||||    
T  19235533 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaacagctacgattttcagacttctcctcactccaaaaacccaatttt 19235434  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca-caaatcagccatcaacaacaaca 266  Q
    ||||||| ||||||||||||||||||||   | ||||||||  |||||||||||||| || |||| |||| |||| ||||| || ||||||||||||||    
T  19235433 aatcccctgatcacccaaaatgttttcc-tgaaatgtttacgagtcctatatacaaccagacatc-aaagaaacagcaaattag-catcaacaacaaca 19235338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 55499641 - 55499572
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctg 89  Q
    |||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  55499641 gttcgcttaagcgaacgggaaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggctg 55499572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 466 - 527
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  466 ttaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 542
Target Start/End: Complemental strand, 13302295 - 13302226
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaa 542  Q
    ||||||||||||||| | |||||||||||||| | ||| |||||||||||||||||  ||| ||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa 13302226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 542
Target Start/End: Complemental strand, 13323842 - 13323773
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaa 542  Q
    ||||||||||||||| | |||||||||||||| | ||| |||||||||||||||||  ||| ||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa 13323773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 528
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  414 tcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtc 513  Q
    |||||||||||||||||||||||   |||  ||||| |  ||| |||| ||||||| | | ||||||||||||||| ||||| || ||||| | ||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  514 tcacccttaccttag 528  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 528
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  414 tcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtc 513  Q
    |||||||||||||||||||||||   |||  ||||| |  ||| |||| ||||||| | | ||||||||||||||| ||||| || ||||| | ||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  514 tcacccttaccttag 528  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 528
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  414 tcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtc 513  Q
    |||||||||||||||||||||||   |||  ||||| |  ||| |||| ||||||| | | ||||||||||||||| ||||| || ||||| | ||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  514 tcacccttaccttag 528  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 542
Target Start/End: Complemental strand, 13312951 - 13312882
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaa 542  Q
    |||||||| |||||| | |||||||||||||| | ||| |||||||||||||||||  ||| ||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa 13312882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 16800747 - 16800811
Alignment:
Q  202 atgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  16800747 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 16800811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||| | |||||||||||||  | ||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Complemental strand, 18127733 - 18127703
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaat 543  Q
    |||||||||||||||||||||||||||||||    
T  18127733 ctcacccttaccttagttttgcagaaaaaat 18127703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Complemental strand, 18135503 - 18135473
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaat 543  Q
    |||||||||||||||||||||||||||||||    
T  18135503 ctcacccttaccttagttttgcagaaaaaat 18135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 12355195 - 12355166
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  12355195 ctcacccttaccttagttttgcagaaaaaa 12355166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 541
Target Start/End: Complemental strand, 13202729 - 13202701
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaa 541  Q
    |||||||||||||||||||||||||||||    
T  13202729 ctcacccttaccttagttttgcagaaaaa 13202701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 15 - 599
Target Start/End: Complemental strand, 13123436 - 13122848
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||| ||||||||| | ||||| |  ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  13123436 tcacggttcgcttaagcgaacgggtagaatcgcattctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctg 13123337  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  13123336 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtc 13123237  T
Q  215 ctatatacaactaggcatctaaaggaaca-caaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaa 305  Q
    ||||||||||||| |||||||| | |||| |||| || |||| |||| ||||| |  ||||||||||||||||||||||||        |||||||||||    
T  13123236 ctatatacaactaagcatctaaggaaacaccaaaacaaccattaacagcaacaatcacagatcattccaccatcatacacaaattcatcaattcatccaa 13123137  T
Q  306 tcactcataaatttc-aatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgac-aagagaattaacctgatcgttac 403  Q
    ||||||||||||| | |||||  ||| ||||||||||||||||| ||||||||||  |||||||||||||||| || || ||||||||| ||||| ||||    
T  13123136 tcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatattacaaatagaattaacatgatcattac 13123038  T
Q  404 ccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattg 503  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||    
T  13123037 ccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattg 13122939  T
Q  504 agacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    ||| |||||||||||||||||||||||||||||   |||||| |||||| | ||||| ||||||||||  |||||||| ||| ||||| |||||||    
T  13122938 agagatagtctcacccttaccttagttttgcag---aaattagacagcaaggatcgg-ttctaggctc-actctcttgttcttgctcttcttctcc 13122848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 15 - 571
Target Start/End: Complemental strand, 12710365 - 12709804
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||| ||||||||| | ||||| |  ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  12710365 tcacggttcgcttaagcgaacgggtagaatcgcattctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctg 12710266  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  12710265 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaattacccaaaatgttttccagcagatgttcacaggtc 12710166  T
Q  215 ctatatacaactaggcatctaaaggaaca-caaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaa 305  Q
    ||||||||||||| |||||||| | |||| |||| || ||||  ||| ||||| |  ||||||||||||||||||||||||        |||||||||||    
T  12710165 ctatatacaactaagcatctaaggaaacaccaaaacaaccattgacagcaacaatcacagatcattccaccatcatacacaaattcatcaattcatccaa 12710066  T
Q  306 tcactcataaatttc-aatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgac-aagagaattaacctgatcgttac 403  Q
    ||||||||||||| | |||||  ||| ||||||||||||||||| ||||||||||  |||||||||||||||| || || ||||||||| ||||| ||||    
T  12710065 tcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatattacaaatagaattaacatgatcattac 12709967  T
Q  404 ccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattg 503  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||    
T  12709966 ccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattg 12709868  T
Q  504 agacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctc 571  Q
    ||| |||||||||||||||||||||||||||||   |||||| |||||| ||||||| ||||||||||    
T  12709867 agagatagtctcacccttaccttagttttgcag---aaattagacagcaagaatcgg-ttctaggctc 12709804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 13743244 - 13743830
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13743244 tcactgttcgcttaagcgaacgggtagaatcgcattctgggcagtttccttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 13743343  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  13743344 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtc 13743443  T
Q  215 ctatatacaactaggcatctaaaggaaca-caaatcagccatcaacaacaacatttgcagatcattccaccatcataca------ca--aattcatccaa 305  Q
    ||||||||||||| |||||||| | |||| |||| ||||||| |||| ||||| |  || |||| |||||||| |||||      ||  |||| ||||||    
T  13743444 ctatatacaactaagcatctaaggaaacaccaaaacagccattaacagcaacaatcacatatcactccaccattatacaattattcatcaatttatccaa 13743543  T
Q  306 tcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttaccc 405  Q
     ||  ||| |||||||| ||| ||||||||||||||| ||||  |||||||| |||| ||||||||  |||  |||||| ||||||| ||||| ||||||    
T  13743544 ccaagcat-aatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattaccc 13743642  T
Q  406 atttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgag 505  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  13743643 atttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgag 13743741  T
Q  506 acatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    | |||||||||||||||||||||||||||||   |||||| |||||| | ||||| ||||||||||  |||||||| ||| ||||| |||||||    
T  13743742 agatagtctcacccttaccttagttttgcag---aaattagacagcaaggatcgg-ttctaggctc-actctcttgttcttgctcttcttctcc 13743830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 13006968 - 13007556
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  13006968 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctg 13007067  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13007068 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 13007167  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||| |||  | |||||| | ||         
T  13007168 ctatatacaactaggcattacaaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcataca 13007267  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  13007268 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 13007366  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  13007367 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 13007463  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||||||  ||||||| ||| || | |||| ||||||||||||||||||| | ||| ||||| |||||||    
T  13007464 gagatagtctcacccttaccttagttttgcag--aaaattagacaacaaggatcgatttctaggctctcctctctagctcttgctcttcttctcc 13007556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 599
Target Start/End: Complemental strand, 12591163 - 12590574
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  12591163 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggaagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctg 12591064  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  12591063 ggcagtgcaaaacctacggtttcagactacttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacagatc 12590964  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatcca-----atc 307  Q
    ||||||||||||||||| | ||||| ||||||| ||| ||||||||||||||| || ||| ||||||| |||||||| || | ||||||| |     |      
T  12590963 ctatatacaactaggcattataaagaaacacaattcaaccatcaacaacaacaattacagaatcattctaccatcatccaaatattcatcaataaataca 12590864  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| ||||||||| ||||||| ||  ||||| || |||| | ||| ||||     
T  12590863 attcatccaaaattcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttact 12590764  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  12590763 catt--ccatcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 12590667  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||||||  ||||||| ||| || | |||| ||||||||||||||||| | | ||| ||||| |||||||    
T  12590666 gagatagtctcacccttaccttagttttgcag--aaaattagacaacaaggatcgatttctaggctctcctctgtagctcttgctcttcttctcc 12590574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 218 - 540
Target Start/End: Original strand, 15167913 - 15168243
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaatt--------catccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||||||||||||||||||||||||        |||||||||||    
T  15167913 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcac 15168012  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  15168013 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 15168112  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  15168113 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagat 15168212  T
Q  510 agtctcacccttaccttagttttgcagaaaa 540  Q
    |||||||||||||||||| ||| | ||||||    
T  15168213 agtctcacccttaccttaatttagaagaaaa 15168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 218 - 532
Target Start/End: Original strand, 18873098 - 18873420
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaatt--------catccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||||||||||||||||||||||||        |||||||||||    
T  18873098 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcac 18873197  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  18873198 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 18873297  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |     
T  18873298 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaa 18873397  T
Q  510 agtctcacccttaccttagtttt 532  Q
    |||||||||||||||||||||||    
T  18873398 agtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 218 - 523
Target Start/End: Complemental strand, 10896108 - 10895795
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc--------caatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||||||||||||||||||||||||||||        |||||||    
T  10896108 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcac 10896009  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||  |||||| ||    
T  10896008 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaataccca-tt 10895910  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttcc-aaagctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    ||| |||||||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  10895909 cccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagaga 10895810  T
Q  509 tagtctcacccttac 523  Q
    |||||||||||||||    
T  10895809 tagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 219 - 531
Target Start/End: Original strand, 14422724 - 14423043
Alignment:
Q  219 atacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcact 310  Q
    |||||| |||||||||||||||||| ||| ||  ||||||||||||||  | ||||||| |||||||||||||| |        |||||||||||||| |    
T  14422724 atacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaat 14422823  T
Q  311 cataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttc 410  Q
    ||||| |||||||||| ||||||||||| |||||| |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  |||||||| |    
T  14422824 cataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcc 14422922  T
Q  411 ccttcagaatcatcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14422923 cct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 14423021  T
Q  510 agtctcacccttaccttagttt 531  Q
    ||||||||||||||||||||||    
T  14423022 agtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 21231480 - 21231216
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||| |  ||||||||||| | ||||||||||||||||||||||||||| ||||| |  |||||||||||||||| |||||||    
T  21231480 tcactgttcgcttaagcgaactgacaaaatcgcattttgggcagcttgcttgaatgctcgcttaagtgacgggtcgttcgcttaagcgaccattcatctg 21231381  T
Q  115 ggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || ||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||||||||||    
T  21231380 ggcagtgcaaaaacctacgggttca-acctcttctcactccaaaaactcaattttaatcccctgatcaccctaaatgttttccagcagatgtttacaggt 21231282  T
Q  214 cctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  21231281 cctatacacaactagacatctaaaggaacacaaatcaggcatcaacaacaacaatt-cagatcattc 21231216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 19 - 266
Target Start/End: Complemental strand, 11383387 - 11383139
Alignment:
Q  19 tgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggta 118  Q
    ||||| |||||||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| |    
T  11383387 tgttcgcttaagcgaaagggcaaaatcacattctaggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggca 11383288  T
Q  119 gtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctat 218  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||||    
T  11383287 gtgcaaaacctacgggttcagacctcttctcactccaagaacccaattttaatcccctgatcacctaaaacgttttccagcagatgtttacaggtcctat 11383188  T
Q  219 atacaactaggc-atctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    | |||||||||| || |||||||||| | | ||| ||||||||||||||    
T  11383187 acacaactaggcaatttaaaggaacatataccaggcatcaacaacaaca 11383139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 203 - 527
Target Start/End: Original strand, 16009301 - 16009631
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca-------- 294  Q
    |||||| |||| || ||||||| ||||||| |||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |            
T  16009301 tgtttataggttctttatacaattaggcatttaaaggaacataaaacacgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatc 16009400  T
Q  295 aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacct 394  Q
    |||||||||||||| |||||| |||||||||  ||||||||||| |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |    
T  16009401 aattcatccaatcaatcataa-tttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacat 16009499  T
Q  395 gatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagatta 494  Q
    ||||  |||||||| |||| |||||||||||||||||| |||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  16009500 gatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattatagatta 16009598  T
Q  495 tgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||| ||||||||||||||||||||    
T  16009599 tgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 11389874 - 11389616
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||| ||||| |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| |  ||||||||| |||||| |    
T  11389874 gctcgctcattgttcgcttaagcgaacgggcaaaatcgcattatggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaaccgaccatt 11389775  T
Q  109 catctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttta 208  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||| |||| || |||| |||||||| ||||||||||    
T  11389774 catctgggcagtgcaaaacctacgggttcagacctcttctcactccaagaatccaattttaatcccctgatcgcctaaaacgttttccagcagatgttta 11389675  T
Q  209 caggtcctatatacaactaggc-atctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| ||||||||||||||| || |||||||||| | | ||| ||||||||||||||    
T  11389674 caggtcttatatacaactaggcaatttaaaggaacatataccagacatcaacaacaaca 11389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 92 - 525
Target Start/End: Original strand, 16676905 - 16677348
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgca-aaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| ||  ||||||| |||||||||| |||||||||||||||| ||||||||||||     
T  16676905 tcgcttaagcgaccaatcatctgggcagtgcagaaacctacggttttcaaccctcttcacactccaaaa-cccaattttaatcccctgatcacccaaaac 16677003  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatca 288  Q
    |||| ||| ||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||| || |||||||||| || | ||    
T  16677004 gtttcccagcagatgtttgcaggttctatatacaactaggcatctaaaggaaacacaaa-caggcatcaacaacaacaatt-cagatcattctacaacca 16677101  T
Q  289 ta--------cacaaattcatccaatcactcataaatttcaa--tcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatg 378  Q
    ||        ||| ||||||||||| || |  | |||| |||  |||| || ||||||||||||||  |  ||||| |  |||||||||||||| |  |     
T  16677102 tacaaaacctcaccaattcatccaaccaattct-aattacaatttcaa-ttgtgatcacagcaacattatagattaggaattcattctgaacatcacttt 16677199  T
Q  379 acaagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttattttcc-aaagctatgcaattaggtcaatt 476  Q
    |||| | | ||||| ||||| |||| |  | | | ||| ||||||||||||||||||||||| || ||||| |||| ||| |||||||||||||||||||    
T  16677200 acaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatt 16677299  T
Q  477 ttcagaaattatagattatgattattgagacatagtctcacccttacct 525  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  16677300 tttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 92 - 525
Target Start/End: Original strand, 17651141 - 17651584
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgca-aaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| ||  ||||||| |||||||||| |||||||||||||||| ||||||||||||     
T  17651141 tcgcttaagcgaccaatcatctgggcagtgcagaaacctacggttttcaaccctcttcacactccaaaa-cccaattttaatcccctgatcacccaaaac 17651239  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatca 288  Q
    |||| ||| ||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||| || |||||||||| || | ||    
T  17651240 gtttcccagcagatgtttgcaggttctatatacaactaggcatctaaaggaaacacaaa-caggcatcaacaacaacaatt-cagatcattctacaacca 17651337  T
Q  289 ta--------cacaaattcatccaatcactcataaatttcaa--tcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatg 378  Q
    ||        ||| ||||||||||| || |  | |||| |||  |||| || ||||||||||||||  |  ||||| |  |||||||||||||| |  |     
T  17651338 tacaaaacctcaccaattcatccaaccaattct-aattacaatttcaa-ttgtgatcacagcaacattatagattaggaattcattctgaacatcacttt 17651435  T
Q  379 acaagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttattttcc-aaagctatgcaattaggtcaatt 476  Q
    |||| | | ||||| ||||| |||| |  | | | ||| ||||||||||||||||||||||| || ||||| |||| ||| |||||||||||||||||||    
T  17651436 acaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatt 17651535  T
Q  477 ttcagaaattatagattatgattattgagacatagtctcacccttacct 525  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17651536 tttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 46625537 - 46625746
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactcca 155  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| || |||| ||||| |||  |||||| ||||    
T  46625537 gcttgcttgaatgctcgcttaagcgacgggtagttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcaaaccctttctcattcca 46625636  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||| ||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||  |||    
T  46625637 aaa-cccaattttaattccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaacataaaacatgcat 46625735  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  46625736 caacaacaaca 46625746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 57 - 280
Target Start/End: Original strand, 13664508 - 13664730
Alignment:
Q  57 agcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactcc 154  Q
    ||||| |||||||||||||||||||||||| |  ||||||| ||||| || |||||| || ||||||||| ||||||| ||||| |||  ||||| ||||    
T  13664508 agcttacttgaatgctcgcttaagcgacgggtcgttcgcttgagcgatcattcatctaggcagtgcaaaaacctacgggtttcaaaccctttctccctcc 13664607  T
Q  155 aaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagcca 254  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||||||| ||| ||    
T  13664608 aaaa-cccaattttaatcccctgatcacccaaaacgttttccaaca-atgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggca 13664705  T
Q  255 tcaacaacaacatttgcagatcattc 280  Q
    |||||||||||| || ||||||||||    
T  13664706 tcaacaacaacaatt-cagatcattc 13664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 2966501 - 2966680
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  2966501 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 2966600  T
Q  115 ggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttt 193  Q
    || || | |||| |||||  |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  2966601 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttt 2966680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 92 - 280
Target Start/End: Original strand, 13679105 - 13679293
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    ||||||||||| ||| ||||||||| ||||||||| ||||||| ||||| |||  |||||||||||||| || ||||||||||||| ||||||||||||     
T  13679105 tcgcttaagcggccattcatctgggcagtgcaaaaacctacgggtttcaaaccctttctcactccaaaa-cctaattttaatcccctgatcacccaaaac 13679203  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    ||||||||| ||||||||| |||| | ||| | ||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||    
T  13679204 gttttccaatagatgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcatcaacaacaacaatt-cagatcattc 13679293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 20906974 - 20906798
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| ||||||||||||||||||||| |||| | ||||| || | |||||| |||||||||||||||||||||||||||||||||||||||||| || ||    
T  20906974 gttcgcttaagcgaacgggtaaaatcacattctgggcag-ttacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatcttggcag 20906876  T
Q  120 tgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
     | ||||  ||||  |||||||| ||| ||||||||||||||| | ||||||||||| |||||||||||| |||||||    
T  20906875 ggtaaaagttacgattttcagacttctcctcactccaaaaacctatttttaatcccctgatcacccaaaacgttttcc 20906798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 2464899 - 2465109
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| || | | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  2464899 tcactgttcgcttaagcgaacgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcgtctg 2464998  T
Q  115 ggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggt 213  Q
    || || | |||| |||||  |||||||| ||| ||||||||||||||||||||||||| |||   |||||||||| |||||||   | ||||||||| ||    
T  2464999 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaattcccaattcacccaaaacgttttcc-tgaaatgtttacaagt 2465097  T
Q  214 cctatatacaac 225  Q
    ||||||||||||    
T  2465098 cctatatacaac 2465109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 14320096 - 14319918
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtg-caaaacctacggtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| ||||||||| |  |  ||||| |||| |||||||| ||| ||||||||||||||||||||||    
T  14320096 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaacgtaaaaacttacgatttcagacttctcctcactccaaaaacccaatttt 14319997  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||| |||||||||||| |||||||| ||  ||||||||||| ||||| |||| ||| |||| |||||||||||||    
T  14319996 aatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacacaattagacatcgaaaggaacacaaa 14319918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 14230449 - 14230548
Alignment:
Q  148 tcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| ||  ||||||||||||||||| ||||||||||||| |||||||||||||    
T  14230449 tcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacacaactaggcatcgaaaggaacacaaa 14230548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 29181629 - 29181402
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattatag-gcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 113  Q
    ||||||||| |||||||||||||||||||||  |||   | ||||||  | |||||| |||||||| |||||| ||||||||||||||||||| ||||||    
T  29181629 tcactgttcgcttaagcgaacgggtaaaatctaattcctgagcagcta-catgaatgttcgcttaaacgacgggtgcttcgcttaagcgaccactcatct 29181531  T
Q  114 gggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacagg 212  Q
    ||| || | ||||  ||||  |||||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||| ||||||| | | ||||||||| |    
T  29181530 gggcagggtaaaagttacgattttcagacttctcctcactccaaaaa-ccagttttaatcccctgatcacccaaaacgttttcc-ataaatgtttacaag 29181433  T
Q  213 tcctatatacaactaggcatctaaaggaaca 243  Q
    ||||||||||||  || |||| |||||||||    
T  29181432 tcctatatacaatcagacatcaaaaggaaca 29181402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 16090659 - 16090837
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||  |||||| ||||||| |||| ||||||||| || | ||||  |||| ||| ||||| ||| |||||||||||||||||    
T  16090659 tgaatgttcgcttaagcgacgagtgcttcacttaagcaaccactcatctgggcagggtaaaagttacgattttcagacttctcctcactccaaaaaccca 16090758  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca 243  Q
     ||||||||||| |||||||||||| ||||||| | | ||||||||| |||||||||||||  || |||| |||||||||    
T  16090759 gttttaatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatatacaatcagacatcaaaaggaaca 16090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 20311522 - 20311356
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactccaaaaaccc 162  Q
    |||||| ||||||||||||||| |  ||||| || ||||| | |||||||||  |||||||| ||||||| ||||||||| |||| |||||||||| |||    
T  20311522 tgaatgttcgcttaagcgacgggtcgttcgcataggcgactattcatctgggctgtgcaaaaacctacgggtttcagacc-cttcccactccaaaa-ccc 20311425  T
Q  163 aattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggca 231  Q
    ||||| |||||||  ||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||    
T  20311424 aatttaaatcccctaatcacccaagatgttttccaacagatgtttacaggtccaatacacaattaggca 20311356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 31155038 - 31155162
Alignment:
Q  123 aaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatac 222  Q
    ||||| |||| |||||||| |||   ||||||||||||||||||||||||||| |||| |||||||||||||||| |   |||||||||||| |||| ||    
T  31155038 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccctgatcgcccaaaatgttttccagcgattgtttacaggtcttatacac 31155137  T
Q  223 aactaggcatctaaaggaacacaaa 247  Q
    | ||||||||| ||| |||||||||    
T  31155138 atctaggcatcaaaaagaacacaaa 31155162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 472 - 581
Target Start/End: Complemental strand, 21231015 - 21230908
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctc 571  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||| ||| |||  ||||||  |||||||| ||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcag-aaagattgcacagca-aaatcggttcctaggctc 21230918  T
Q  572 tcctctcttg 581  Q
    | ||||||||    
T  21230917 ttctctcttg 21230908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 3857884 - 3857675
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcatta-taggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatct 113  Q
    ||||||||| |||| ||||||||||||||||  |||  | |||||||  | |||||| ||||||||||||||||||  ||||||||||||||| ||||||    
T  3857884 tcactgttcgcttaggcgaacgggtaaaatctgatttctgggcagcta-catgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 3857786  T
Q  114 gggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacagg 212  Q
    ||  || | | |   |||| ||| ||||| |||  ||||||||||||||||||||||||||||   |||||||||| ||||||| | | ||||||||| |    
T  3857785 ggacagggtacagt-tacgattttcagacttctcatcactccaaaaacccaattttaatccccaattcacccaaaacgttttcc-agaaatgtttacaag 3857688  T
Q  213 tcctatatacaac 225  Q
    |||||||||||||    
T  3857687 tcctatatacaac 3857675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 539
Target Start/End: Complemental strand, 20311107 - 20311038
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttag--ttttgcagaaa 539  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaa 20311038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  464 aattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||| |||||||||| |||||||| || ||||| ||||| | ||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 14566925 - 14566988
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||||||| |  ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  14566925 tgtttacaggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 14566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||| ||||||| || | ||| |||||||||| ||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Complemental strand, 46347913 - 46347883
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaat 543  Q
    |||||||||||||||||||||||||||||||    
T  46347913 ctcacccttaccttagttttgcagaaaaaat 46347883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  492 ttatgattattgagacatagtctcacccttaccttagttttg 533  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  492 ttatgattattgagacatagtctcacccttaccttagttttg 533  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 13678863 - 13678896
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgacc 105  Q
    |||||||||||||||||| |||||||||||||||    
T  13678863 tcgcttaagcgacggctggttcgcttaagcgacc 13678896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 541
Target Start/End: Original strand, 14129216 - 14129245
Alignment:
Q  512 tctcacccttaccttagttttgcagaaaaa 541  Q
    ||||||||||||||||||||||||||||||    
T  14129216 tctcacccttaccttagttttgcagaaaaa 14129245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 541
Target Start/End: Original strand, 14136062 - 14136091
Alignment:
Q  512 tctcacccttaccttagttttgcagaaaaa 541  Q
    ||||||||||||||||||||||||||||||    
T  14136062 tctcacccttaccttagttttgcagaaaaa 14136091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 541
Target Start/End: Original strand, 14433034 - 14433063
Alignment:
Q  512 tctcacccttaccttagttttgcagaaaaa 541  Q
    ||||||||||||||||||||||||||||||    
T  14433034 tctcacccttaccttagttttgcagaaaaa 14433063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 533
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  492 ttatgattattgagacatagtctcacccttaccttagttttg 533  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||| ||||||||| ||||| || |||||||  |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 20 - 599
Target Start/End: Original strand, 23866153 - 23866736
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| |||||||||||||||| ||||||||| | ||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  23866153 gttcgcttaagcgaacgggtagaatcgcattctgggcagttaccttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccaatcatctgggcag 23866252  T
Q  120 tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctata 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  23866253 tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccaatcacccaaaatgttttccagcagatgttcacaggtcctata 23866352  T
Q  220 tacaactaggcatctaaaggaaca-caaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcact 310  Q
    |||||||| |||||||| | |||| |||| || |||| |||| ||||| |  ||||| ||||||||||||||||||        ||||||||||||||||    
T  23866353 tacaactaagcatctaaggaaacaccaaaacaaccattaacagcaacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcact 23866452  T
Q  311 cataaatttc-aatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgac-aagagaattaacctgatcgttacccatt 408  Q
    |||||||| | |||||  ||| ||||| ||||||||||| ||||||||||  |||||||||||||||| || || ||||||||| ||||| |||||||||    
T  23866453 cataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatt 23866551  T
Q  409 tcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||| |    
T  23866552 tctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagaga 23866650  T
Q  509 tagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    ||||||||||||||||||||||||||||   |||||| |||||| | ||||| ||||||||||  |||||||| ||| ||||| |||||||    
T  23866651 tagtctcacccttaccttagttttgcag---aaattagacagcaaggatcgg-ttctaggctc-actctcttgttcttgctcttcttctcc 23866736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 17054127 - 17054714
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||    
T  17054127 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatacttcgcttaagcgaccactcatctg 17054226  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17054227 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtc 17054326  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||| ||  || ||||||||||||||  |||  | |||||| | ||         
T  17054327 ctatatacaactaggcattacaaagaaacacaattcagccatcaacaacaacaattatagaatcattccaccatctcacaatatttcatcaattcataca 17054426  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  | | ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  17054427 attcatccacaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttact 17054525  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||||||    
T  17054526 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcaggaattatagattatgattattga 17054622  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || ||||||||||||||||||| |||||||||   |||||| ||||||   |||| |||||||||||| |||||| | ||| ||||| |||||||    
T  17054623 gagatagtctcacccttaccttggttttgcag---aaattagacagcaatgatcgatttctaggctctactctctagctcttgctcttcttctcc 17054714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 9 - 280
Target Start/End: Complemental strand, 14057090 - 14056819
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| |||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| |  |||||||||||||||| |    
T  14057090 gctcgctcactgttcgcttaagcgaacgggcaaaatcgtattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccatt 14056991  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  14056990 catctgggcagtgcaaaaacctacgggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgttt 14056891  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||    
T  14056890 acaggtcctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaatt-cagatcattc 14056819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 25111515 - 25111778
Alignment:
Q  19 tgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggta 118  Q
    ||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||||||| |||||| |  |||||||||||||||| ||||||||| |    
T  25111515 tgttcgcttaagcgaacgggcaaaatcgcattctgggcagcttgcttgaatgctcgcttaaacgacgggtcgttcgcttaagcgaccattcatctgggca 25111614  T
Q  119 gtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtccta 217  Q
    |||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  25111615 gtgcaaaaacctacaggttcaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtccta 25111714  T
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattcca 282  Q
    || ||||||| ||||||||||||||||||| ||| |||||||||||||| || ||||||||||||    
T  25111715 tacacaactatgcatctaaaggaacacaaaacaggcatcaacaacaacaatt-cagatcattcca 25111778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 218 - 525
Target Start/End: Complemental strand, 8728050 - 8727735
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaattcatc--------caatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||||||||||||||||||||||||||||        |||||||    
T  8728050 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcac 8727951  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||||||||||| || |||| ||||||||| |||||  |||||| |     
T  8727950 tcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-ta 8727852  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttcc-aaagctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    ||| ||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  8727851 cccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgaggga 8727752  T
Q  509 tagtctcacccttacct 525  Q
    || ||||||||||||||    
T  8727751 taatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 218 - 528
Target Start/End: Original strand, 44477362 - 44477678
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  44477362 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 44477461  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| |||||||  | |||| ||||||||| |||||  ||||||||     
T  44477462 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattc 44477560  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44477561 ccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 44477659  T
Q  510 agtctcacccttaccttag 528  Q
    |||||||||||||||||||    
T  44477660 agtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 218 - 528
Target Start/End: Original strand, 44492520 - 44492836
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  44492520 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 44492619  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| |||||||  | |||| ||||||||| |||||  ||||||||     
T  44492620 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattc 44492718  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44492719 ccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 44492817  T
Q  510 agtctcacccttaccttag 528  Q
    |||||||||||||||||||    
T  44492818 agtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 54 - 280
Target Start/End: Original strand, 18613846 - 18614072
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcac 151  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  18613846 ggcagcttgcttgaatgctcgcttaagcgacggttttttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaacctcttctcac 18613945  T
Q  152 tccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcag 251  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||   ||| |||||||| || ||||||||| ||||| |||    
T  18613946 tccaaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggtttaatacacaactagacacctaaaggaatacaaaacag 18614044  T
Q  252 ccatcaacaacaacatttgcagatcattc 280  Q
     |||||||||||||| || ||||||||||    
T  18614045 gcatcaacaacaacaatt-cagatcattc 18614072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 24321191 - 24321009
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  24321191 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgctttgcttaagcgaccaatcatctg 24321092  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  24321091 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 24321009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 21839979 - 21840188
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||||| ||||||||| |  |||||||||| ||||| ||||||||| ||||||||| ||    ||||||| |||  |||||| ||||    
T  21839979 gcttgcttgaatgctcgctcaagcgacggatcgttcgcttaagtgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttctcattcca 21840078  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| ||||||| |||| || |||||| |||||||||||||| | ||||||| | ||||||||||||||||||||| ||  |||    
T  21840079 aaa-cccaattttaatcccctgatcacctaaaacgtattccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacacaaaacatgcat 21840177  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  21840178 caacaacaaca 21840188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 21931275 - 21931484
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||||| ||||||||| |  ||||||| || ||||| ||||||||| ||||||||| ||    ||||||| |||  |||||| ||||    
T  21931275 gcttgcttgaatgctcgctcaagcgacggatcgttcgcttcagagaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttctcattcca 21931374  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| |||||||||||| || |||||| |||||||||||||| | ||||||| | ||||||||||||||||||||| ||  |||    
T  21931375 aaa-cccaattttaatcccctgatcacccaaaacgtattccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacacaaaacatgcat 21931473  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  21931474 caacaacaaca 21931484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 295 - 599
Target Start/End: Complemental strand, 27941085 - 27940782
Alignment:
Q  295 aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacct 394  Q
    |||||||||||||| |||||| |||||||||| ||||||||| | |||||  |  |||||| |||||||||||||||||| || |||| ||||||||| |    
T  27941085 aattcatccaatcaatcataa-tttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaattaacat 27940987  T
Q  395 gatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttattttccaa-agctatgcaattaggtcaattttcagaaattataga 491  Q
    ||||  |||||| ||||| |||||||||||||||||||||||  | ||||  ||||||| ||| | | || | | |    |||||||||||||| ||| |    
T  27940986 gatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatcaaacaattttcagaaatcatata 27940888  T
Q  492 ttatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctct 591  Q
    |||| || |||||    ||| |||||||||||||||||||||||| ||  |||| ||||||  |||||||| ||| || ||||||||||| ||| |||||    
T  27940887 ttataatcattgaaggttagcctcacccttaccttagttttgcag-aatgattacacagca-caatcggttcctaagccctcctctcttgttcttgctct 27940790  T
Q  592 gcttctcc 599  Q
     |||||||    
T  27940789 tcttctcc 27940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 29643795 - 29643655
Alignment:
Q  127 cctacggtttcagacctcttctcactccaaaaa-cccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaac 225  Q
    |||||| |||||||| ||| ||||||||||||| |||| ||||||||||  |||||||||||| |||||||| || |||||||||||| | ||| |||||    
T  29643795 cctacgatttcagacttctcctcactccaaaaaacccacttttaatcccgtgatcacccaaaacgttttccagcaaatgtttacaggttcaatacacaac 29643696  T
Q  226 taggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||||| ||||||||| ||| ||| ||||| ||||||||    
T  29643695 taggcatcaaaaggaacataaaacaggcatcatcaacaaca 29643655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 471 - 540
Target Start/End: Original strand, 18614271 - 18614340
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaa 540  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttaccttaatttagaagaaaa 18614340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 19750235 - 19750337
Alignment:
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaaca 263  Q
    |||| ||||||| |||||||||||| ||||||||  | |||||||||||| || |||| ||  ||||||||||||||||||||| ||  ||||||| |||    
T  19750235 atttcaatcccctgatcacccaaaacgttttccagaaaatgtttacaggttctgtatataataaggcatctaaaggaacacaaaacatgcatcaactaca 19750334  T
Q  264 aca 266  Q
    |||    
T  19750335 aca 19750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 539
Target Start/End: Complemental strand, 14056619 - 14056552
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    |||||||||||| ||| | | ||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaa 14056552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 581
Target Start/End: Original strand, 25111976 - 25112083
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctc 571  Q
    |||||||||||| ||| | | ||| |||||||||| ||||||||||||||||||||| |||| || ||| |||  ||| ||  |||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtag-aaagattgcacaaca-aaatcggtttctaggctc 25112073  T
Q  572 tcctctcttg 581  Q
    | ||||||||    
T  25112074 ttctctcttg 25112083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||| || | ||| |||||||||| ||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 540
Target Start/End: Complemental strand, 29643440 - 29643373
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaa 540  Q
    ||||||||||||||| | |||||||||||||| | ||| |||||||||||||||| ||| | ||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttaatttagaagaaaa 29643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 18613621 - 18613654
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgacc 105  Q
    |||||||||||||||||| |||||||||||||||    
T  18613621 tcgcttaagcgacggctggttcgcttaagcgacc 18613654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||| ||||| ||||| || |||||||  ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 20 - 525
Target Start/End: Complemental strand, 14913 - 14398
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| |||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  14913 gttcgcttaagcgaacgggcaaaatcgcattctgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaagcgaccaatcatctgggcag 14814  T
Q  120 tgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctat 218  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  14813 tgcaaaaacctacgatttcagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgtttataggtcctat 14714  T
Q  219 atacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcata--------cacaaattcatccaatcac 309  Q
    ||||||||||| ||||||||| |||| ||| || |||||||||||||||  | ||||||||||||||||||||        ||  |||| |||||||||     
T  14713 atacaactaggtatctaaaggaaacataaaacatccatcaacaacaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaa 14614  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||| | |||||||||  ||||||||||||||||| ||  |||||||||||||||| |||||| | || |||| ||||||||| ||||| ||||||||||    
T  14613 tcat-attttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccattt 14515  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttcc-aaagctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14514 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 14415  T
Q  509 tagtctcacccttacct 525  Q
    |||||||||||||||||    
T  14414 tagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 243; Significance: 1e-134; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 15 - 599
Target Start/End: Original strand, 23528166 - 23528756
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| ||||||||||| || || |||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  23528166 tcacggttcgcttaagcgaacaggcaacatcgcattctgggcagcttgcttgaatgctcggttaagcgacgggtgcttcgcttaagcgaccactcatctg 23528265  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  23528266 ggcagtgcaaaacctacggtttcagacctcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgtttcccaacagatgtttacaggtc 23528365  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    ||||||||||||||||| | || || ||||||| ||| ||||||||||||||| ||  || ||||||| ||||||| |||  | |||||| | ||         
T  23528366 ctatatacaactaggcattatacagaaacacaattcaaccatcaacaacaacaattatagaatcattctaccatcacacaatatttcatcaattcataca 23528465  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||| ||||||||| | || ||| |||||||||||| |||||||| |||| |||| ||||||| ||  ||||| || |||| | ||| ||||     
T  23528466 attcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttact 23528565  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattga 504  Q
    ||||  || ||||||||||||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  23528566 catt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattga 23528662  T
Q  505 gacatagtctcacccttaccttagttttgcagaaaaaattatacagc-aggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    || |||||||||||||||||||||||||  ||||  || || ||||| | | |||| ||||||||||||||||||| | ||||||||| |||||||    
T  23528663 gagatagtctcacccttaccttagtttt--agaaggaaatagacagcaaaggatcgatttctaggctctcctctctagctctggctcttcttctcc 23528756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 218 - 532
Target Start/End: Original strand, 22750879 - 22751201
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacacaaatt--------catccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||||||| || ||||||||||||||||||||||||||||        |||||||||||    
T  22750879 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcac 22750978  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  22750979 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 22751078  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |     
T  22751079 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaa 22751178  T
Q  510 agtctcacccttaccttagtttt 532  Q
    |||||||||||||||||||||||    
T  22751179 agtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 218 - 538
Target Start/End: Complemental strand, 38144852 - 38144526
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  |||||| |||||||  | ||||||| |||||||||||||| |        ||||||||||||||     
T  38144852 tatacaattaggcatctaaaggaacataaaacatgcatcaagaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaa 38144753  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    || ||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  ||||||||     
T  38144752 tcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattc 38144654  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38144653 ccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagat 38144555  T
Q  510 agtctcacccttaccttagttttgcagaa 538  Q
    |||||||||||||||||||||||||||||    
T  38144554 agtctcacccttaccttagttttgcagaa 38144526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 203 - 527
Target Start/End: Complemental strand, 28370385 - 28370055
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca-------- 294  Q
    |||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |            
T  28370385 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatc 28370286  T
Q  295 aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacct 394  Q
    ||||||||| |||| |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| |||||||  | |||| ||||||||| |    
T  28370285 aattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacat 28370187  T
Q  395 gatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagatta 494  Q
    ||||  |||||||| |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28370186 gatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 28370088  T
Q  495 tgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||| ||||||||||||||||||||    
T  28370087 tgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 218 - 527
Target Start/End: Original strand, 19512125 - 19512441
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  19512125 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 19512224  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| |||||||  | |||| ||||||||| |||||  ||||||||     
T  19512225 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattc 19512323  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    |||| || ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19512324 ccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 19512422  T
Q  509 tagtctcacccttacctta 527  Q
    |||||||||||||||||||    
T  19512423 tagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 54 - 280
Target Start/End: Complemental strand, 18408423 - 18408200
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgc-aaaacctac-ggtttcagacctcttctcac 151  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||| |||||||| ||||||||| ||||||| |||| |||||||    
T  18408423 ggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctcggtagtgcaaaaacctacgggtttcaaaccttttctcac 18408324  T
Q  152 tccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcag 251  Q
    ||| |||||||||||||||||||| ||||||||||     ||||||||||||| |||||||| |  | |||||||||||||||||||||||||||| |||    
T  18408323 tcc-aaaacccaattttaatcccctgatcacccaa---cgtttccaacagatggttacaggttcattgtacaactaggcatctaaaggaacacaaaacag 18408228  T
Q  252 ccatcaacaacaacatttgcagatcattc 280  Q
     ||| |||||||||| || ||||||||||    
T  18408227 gcattaacaacaacaatt-cagatcattc 18408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 19236435 - 19236617
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  19236435 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatctg 19236534  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  19236535 ggcagggtaaaagctacgattttcagacctctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 19236617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 22467315 - 22467497
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||||| || || |  | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  22467315 tcactgttcgcttaagcgaacgggtaaaatcacattatgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 22467414  T
Q  115 ggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| |||||  |||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  22467415 ggcagggtaaaagctacgattttcagacttctcctcactccaaagacccaattttaatcccctgatcacccaaaacgttttcc 22467497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 22460691 - 22460873
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||||| || || |  | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  22460691 tcactgttcgcttaagcgaacgggtaaaatcacattatgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 22460790  T
Q  115 ggtagtgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| |||||  |||||||| ||| ||||||||||| |||||| |||||||||| |||||||||||| |||||||    
T  22460791 ggcagggtaaaagctacgattttcagacttctcctcactccaaagacccaagtttaatcccctgatcacccaaaacgttttcc 22460873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 34829674 - 34829852
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctggg-tagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| |||||||||  ||   ||||| |||| |||||||| ||||||||||||||||||||||||||    
T  34829674 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcagacttcttctcactccaaaaacccaatttt 34829773  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||  ||||||||||||||||||||| ||  |||||||||||| |||| ||||||||||| | |||||| ||||||    
T  34829774 aatcccatgatcacccaaaatgttttccagcaattgtttacaggtcttatacacaactaggcaccgaaaggagcacaaa 34829852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 22439218 - 22439051
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactccaaaaaccc 162  Q
    |||||| ||||||||||||||| |  |||||||||||||| | ||||||||  ||||||||| ||||||| ||||| |||  ||| |||||||||| |||    
T  22439218 tgaatgttcgcttaagcgacgggtcgttcgcttaagcgactattcatctggacagtgcaaaaacctacgggtttcataccctttcccactccaaaa-ccc 22439120  T
Q  163 aattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggca 231  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||| ||| ||| |||| ||||||    
T  22439119 aatttaaatcccctgatcacccaagatgttttccaacagatgtttacagttccaatacacaattaggca 22439051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 24930393 - 24930266
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| ||||||||| || | || | ||||| ||| ||||| ||| ||||||||||||||||||||||    
T  24930393 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaacagctacgattttcagacttctcctcactccaaaaacccaatttt 24930294  T
Q  169 aatcccccgatcacccaaaatgttttcc 196  Q
    ||||||| ||||||||||||||||||||    
T  24930293 aatcccctgatcacccaaaatgttttcc 24930266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 472 - 539
Target Start/End: Complemental strand, 22438803 - 22438735
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttag-ttttgcagaaa 539  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaa 22438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 20772625 - 20772733
Alignment:
Q  134 tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatc 233  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||   | ||||||||| |||||||||||||| || ||||    
T  20772625 tttcagacttctcctcactccaaaaacccaattttaatcccctgattacccaaaacgttttcc-tgaaatgtttacaagtcctatatacaaccagacatc 20772723  T
Q  234 taaaggaaca 243  Q
     |||| ||||    
T  20772724 aaaagaaaca 20772733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 20781400 - 20781508
Alignment:
Q  134 tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatc 233  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||  ||||||   | ||||||||| |||||||||||||| || ||||    
T  20781400 tttcagacttctcctcactccaaaaacccaattttaatcccctgattacccaaaacattttcc-tgaaatgtttacaagtcctatatacaaccagacatc 20781498  T
Q  234 taaaggaaca 243  Q
     |||| ||||    
T  20781499 aaaagaaaca 20781508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 28889805 - 28889651
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||| || || | | |   |||| ||| ||| | ||| |||||||||||||||||    
T  28889805 tgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcagggtacagt-tacgattttcaggcttctcctcactccaaaaaccca 28889707  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||||||||   || ||||||| ||||||| | | ||||||||| |||||||||    
T  28889706 attttaatccccaattcgcccaaaacgttttcc-agaaatgtttacaagtcctatat 28889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 28896509 - 28896355
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||| || || | | |   |||| ||| ||| | ||| |||||||||||||||||    
T  28896509 tgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcagggtacagt-tacgattttcaggcttctcctcactccaaaaaccca 28896411  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||||||||   || ||||||| ||||||| | | ||||||||| |||||||||    
T  28896410 attttaatccccaattcgcccaaaacgttttcc-agaaatgtttacaagtcctatat 28896355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 28909757 - 28909603
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||| || || | | |   |||| ||| ||| | ||| |||||||||||||||||    
T  28909757 tgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcagggtacagt-tacgattttcaggcttctcctcactccaaaaaccca 28909659  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||||||||   || ||||||| ||||||| | | ||||||||| |||||||||    
T  28909658 attttaatccccaattcgcccaaaacgttttcc-agaaatgtttacaagtcctatat 28909603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 28925335 - 28925181
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||| || || | | |   |||| ||| ||| | ||| |||||||||||||||||    
T  28925335 tgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcagggtacagt-tacgattttcaggcttctcctcactccaaaaaccca 28925237  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||||||||   || ||||||| ||||||| | | ||||||||| |||||||||    
T  28925236 attttaatccccaattcgcccaaaacgttttcc-agaaatgtttacaagtcctatat 28925181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 28931449 - 28931295
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||| || || | | |   |||| ||| ||| | ||| |||||||||||||||||    
T  28931449 tgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcagggtacagt-tacgattttcaggcttctcctcactccaaaaaccca 28931351  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||||||||   || ||||||| ||||||| | | ||||||||| |||||||||    
T  28931350 attttaatccccaattcgcccaaaacgttttcc-agaaatgtttacaagtcctatat 28931295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 28946152 - 28945998
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||||||  ||||||||||||||| |||||| || || | | |   |||| ||| ||| | ||| |||||||||||||||||    
T  28946152 tgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcagggtacagt-tacgattttcaggcttctcctcactccaaaaaccca 28946054  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||||||||   || ||||||| ||||||| | | ||||||||| |||||||||    
T  28946053 attttaatccccaattcgcccaaaacgttttcc-agaaatgtttacaagtcctatat 28945998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 599
Target Start/End: Original strand, 42961566 - 42961691
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctc 571  Q
    |||||||||||||| ||| ||||| || |||||    ||| ||||||||||||||||||||||||||  | ||| ||||||  |||||||| ||| || |    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatga-ttacacagcac-aatcggttcctaagccc 42961663  T
Q  572 tcctctcttggtctggctctgcttctcc 599  Q
    |||||||||| ||| ||||| |||||||    
T  42961664 tcctctcttgttcttgctcttcttctcc 42961691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  475 ttttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  475 ttttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 22337258 - 22337306
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  22337258 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 22337306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 22340796 - 22340844
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  22340796 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 22340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 42961304 - 42961352
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  42961304 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 42961352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 91 - 599
Target Start/End: Original strand, 10953 - 11466
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgca-aaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaa 188  Q
    ||||||||||||||||||||| |||| || ||| ||||||||||||| ||  ||||||| ||| |||||| |||||||||||||||| ||||||||||||    
T  10953 ttcgcttaagcgaccaatcatttgggcagcgcagaaacctacggttttcaaccctcttcacaccccaaaa-cccaattttaatcccctgatcacccaaaa 11051  T
Q  189 tgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaa-cacaaatcagccatcaacaacaacatttgcagatcattccaccatc 287  Q
     |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||||||||||||| |  ||||||| |||||||||    
T  11052 cgttttccaacagatgtttacaggttccatatacaactaggcatctaaaggaaacacaaa-cagccatcaacaacaacaata-cagatcaatccaccatc 11149  T
Q  288 atacacaa--------attcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatga 379  Q
    ||||| ||        ||||||||||||| | |||  |||||||||| || ||||||||||||||  | |||||||| ||||||| ||||||| | || |    
T  11150 atacaaaacttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacatta 11248  T
Q  380 caagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tattttccaaagctatgcaattaggtcaatttt 478  Q
    ||| ||||||||| ||||| |||| |||| |||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  11249 caacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt 11347  T
Q  479 cagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctc 578  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||| ||||||  |||||||| ||||||||| |||||    
T  11348 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcag-aaggattacacagca-aaatcggttcctaggctcttctctc 11445  T
Q  579 ttggtctggctctgcttctcc 599  Q
    ||| ||| ||||| |||||||    
T  11446 ttgttcttgctcttcttctcc 11466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 10896 - 10966
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaa-tcgcattataggcagcttgcttgaatgctcgcttaagcgac 84  Q
    |||| |||| |||||||||||||| |||| ||||||| | |||| |||||||||||| |||||||||||||    
T  10896 tcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcaacttgcttgaatgttcgcttaagcgac 10966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 203; Significance: 1e-110; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 62 - 538
Target Start/End: Original strand, 17750 - 18235
Alignment:
Q  62 gcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacc 161  Q
    ||||||||||| ||||||||||||| |   ||||||||||||||| ||||||||| ||   ||||| ||||| ||||||||||| ||| |||||||||||    
T  17750 gcttgaatgcttgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcaggcaaaaacttacgggttcagacctctcctccctccaaaaacc 17849  T
Q  162 caattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaat-cagccatcaaca 260  Q
    ||| |||||||||  |||||||||||| |||||||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||  ||| ||| ||||    
T  17850 caactttaatcccgtgatcacccaaaacgttttccaacagatgtttacaggttctatacacaattaggcctctaaaggaacgcaaaaacaggcattaaca 17949  T
Q  261 acaacatttgcagatcattccaccatcatacacaaattcatc--------caatcactcataaatttcaatcaagttatgatcacagcaacaacaaggat 352  Q
    |||||| || ||||||||  |||||||||||| | |||||||        |||||| ||  ||||||||||||| | ||||||||||||||||||  | |    
T  17950 acaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggt 18048  T
Q  353 taagttttcattctgaacattatatgacaag-agaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatttt 451  Q
    ||||||||||||||| |||| | || ||||  ||||||||| ||| | ||||| ||||||| | ||||||||||| ||||| ||||||||||||||||||    
T  18049 taagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttatttt 18147  T
Q  452 cc-aaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaa 538  Q
    || ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18148 cctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 18235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 92 - 599
Target Start/End: Original strand, 26583440 - 26583951
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    ||||||||||||| | ||||||||| ||||||||| |||||||||| ||  ||||||| |||||||||| |||||||||||||||| ||||||||||||     
T  26583440 tcgcttaagcgactattcatctgggcagtgcaaaaacctacggttttcaaccctcttcacactccaaaa-cccaattttaatcccctgatcacccaaaac 26583538  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaa-cacaaatcagccatcaacaacaacatttgcagatcattccaccatca 288  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||| |||||||||||||| |  ||||||||||||||||||    
T  26583539 gttttccagcagatgtttacaggttctatacacaactaggcatctaaaggaaacacaaa-cagacatcaacaacaacaata-cagatcattccaccatca 26583636  T
Q  289 tacacaa--------attcatccaatcactcataaatttcaat-caagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatga 379  Q
    |||| ||        |||||||||| || |  ||| || |||| ||| || ||||||||||||||  |  ||||| |  |||||||||||||| |  | |    
T  26583637 tacaaaatttcaccaattcatccaaccaattctaa-ttacaattcaaattgtgatcacagcaacattatagattaggaattcattctgaacatcacttta 26583735  T
Q  380 caagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttc 479  Q
    ||| | | ||||| ||||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |    
T  26583736 caacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattt-c 26583833  T
Q  480 agaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctct 579  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||| | |||||||  |||||||||||||||    
T  26583834 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcag--aaaattagacagcaaggatcggttcttaggctctcctctct 26583931  T
Q  580 tggtctggctctgcttctcc 599  Q
     | | ||||||| |||||||    
T  26583932 agctttggctcttcttctcc 26583951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 527
Target Start/End: Complemental strand, 23101988 - 23101463
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| |||| |||| |||||||||||||| ||||||||||| | |||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |    
T  23101988 gctcgctcacggttcgcttaagcgaacgggcaaaatcgcattctgggcagcttccttgaattctcgcttaagcgacggctggttcgcttaagcgaccatt 23101889  T
Q  109 catctgggtagtgca-aaacctacgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
    |||||||| |||||| |||||||||| |||||  ||||||| |||| | |||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  23101888 catctgggcagtgcagaaacctacggttttcaaccctcttcacact-ctaaaacccaattttaatcccctgatcacccaaaacgttttccatcagatgtt 23101790  T
Q  207 tacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aat 297  Q
    ||||||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||  | | |||||||||||||||||||| |        |||    
T  23101789 tacaggttctatacacaactaggcatctaaaggaaacacaaa-cagacatcaacaacaaca-atactgatcattccaccatcatacagaacttcatgaat 23101692  T
Q  298 tcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgat 397  Q
    ||||||||||| | || | |||||||||| ||||||||||| |||||  |  ||||||| |||||||| |||| | | || |||| | ||||||| ||||    
T  23101691 tcatccaatcaattat-attttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgat 23101593  T
Q  398 cgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattat-g 496  Q
    | ||||||| ||||| |||||||||||||||||||||||||||||||||  |   ||| | ||  ||||||||||||||||| ||||||| | |||||      
T  23101592 cattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaaacaattaggtcaattttccgaaattacatattatct 23101494  T
Q  497 attattgagacatagtctcacccttacctta 527  Q
    |||| ||||| ||||||||||||||||||||    
T  23101493 attaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 15 - 528
Target Start/End: Complemental strand, 5706543 - 5706023
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  5706543 tcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctg 5706444  T
Q  115 ggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtc 214  Q
    |  ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  5706443 gacagtgcaaaacctacggtttcagaccacttctcactccaaaaactccattttaatcccctgattacccaaaatatattccaacagatgtttacaggtc 5706344  T
Q  215 ctatatacaactaggca-tctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc----- 307  Q
    | ||||||||||||||| | ||||| ||||||| ||| ||||||||| ||||| |  ||| ||||| | | |||||| |||| ||||||| | ||         
T  5706343 caatatacaactaggcattataaagaaacacaattcaaccatcaacagcaacaatcacagaatcatcctatcatcatccacatattcatcaattcataca 5706244  T
Q  308 actcat--aaatttcaatcaagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacc 404  Q
    | ||||  ||||||||||||| | || |||   |||||||||| |||| ||| ||||||||| ||||||| ||    ||| || |||| | ||| ||||     
T  5706243 attcatcaaaatttcaatcaattaatggattgtagcaacaacatggatcaagctttcattcttaacattaaattcagaga-aactaacatcatctttact 5706145  T
Q  405 catttcccttcagaatcatcatcaaaccctaaccctca-atttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattg 503  Q
    ||||  || |||||||||||||||||||||||   ||| |||  ||||| ||| |||| |||||||||||| |||||| |||||||||||||||||| ||    
T  5706144 catt--ccatcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatg 5706048  T
Q  504 agacatagtctcacccttaccttag 528  Q
    ||| |||||||||||||||||||||    
T  5706047 agagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 218 - 540
Target Start/End: Complemental strand, 19661769 - 19661441
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||  | ||||||| |||||||||||||| |        ||||||||||||||     
T  19661769 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaa 19661670  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||| |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  ||||||||     
T  19661669 tcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattc 19661571  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |     
T  19661570 ccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaa 19661472  T
Q  510 agtctcacccttaccttagttttgcagaaaa 540  Q
    |||||||||||||||||| ||| | ||||||    
T  19661471 agtctcacccttaccttaatttagaagaaaa 19661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 218 - 527
Target Start/End: Original strand, 6483457 - 6483772
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||| ||||     
T  6483457 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaa 6483556  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| |||||||  | |||| ||||||||| |||||  ||||||||     
T  6483557 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattc 6483655  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6483656 ccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 6483754  T
Q  510 agtctcacccttacctta 527  Q
    ||||||||||||||||||    
T  6483755 agtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 218 - 527
Target Start/End: Original strand, 6486924 - 6487239
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| ||| |||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||| ||||     
T  6486924 tatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaa 6487023  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||| |||||||  | |||| ||||||||| |||||  ||||||||     
T  6487024 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattc 6487122  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacat 509  Q
    |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6487123 ccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 6487221  T
Q  510 agtctcacccttacctta 527  Q
    ||||||||||||||||||    
T  6487222 agtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 9 - 525
Target Start/End: Complemental strand, 23089560 - 23089057
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| |||| |||| |||||||||||||| ||| ||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||            
T  23089560 gctcgctcacggttcgcttaagcgaacgggcaaa-tcgcattctgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag-------- 23089470  T
Q  109 catctgggtagtgca-aaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
               |||| ||||||||||||| ||  |||||||  ||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||    
T  23089469 -----------tgcagaaacctacggttttcaaccctcttcagactccaaaa-cccaattttaatcccctgatcacccaaaacgttttccagcagatgtt 23089382  T
Q  207 tacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aat 297  Q
    ||||||| ||||| |||||||| |||||||||| |||||||| ||| ||||||||||||||  | |||||||||||||||||||||| |        |||    
T  23089381 tacaggttctatacacaactagtcatctaaaggaaacacaaa-cagacatcaacaacaaca-atacagatcattccaccatcatacagaacttcatcaat 23089284  T
Q  298 tcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgat 397  Q
    ||||||||||| | || | |||||||||| |||||||||||||||||  |  ||||||| |||||||| |||| | | || |||| | ||||||| ||||    
T  23089283 tcatccaatcaattat-attttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgat 23089185  T
Q  398 cgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattat-g 496  Q
    | ||||||||| ||||| |||||||||||||||||||||||||||||||  |   ||| | || |||||||||||||||||| ||||||| | |||||      
T  23089184 cattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaaatattatct 23089086  T
Q  497 attattgagacatagtctcacccttacct 525  Q
    |||| ||||| ||||||||||||||||||    
T  23089085 attaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 65 - 525
Target Start/End: Original strand, 23878595 - 23879060
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacgg-tttcagacctcttctcactccaaaaaccca 163  Q
    |||||| ||||||||||||||  |  |||||||||||||| | ||||||||   ||||||||||||||| ||| |||||  ||| |||||||||| ||||    
T  23878595 tgaatgttcgcttaagcgacgagtcgttcgcttaagcgactattcatctggactgtgcaaaacctacgggttttagaccctttcccactccaaaa-ccca 23878693  T
Q  164 attttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaac 262  Q
    |||||||||||  ||||  |||||| |||| ||| ||||||||||||||| ||||| | ||||||||||||||||| |||||||| ||| ||||||||||    
T  23878694 attttaatcccttgatcgtccaaaacgtttcccagcagatgtttacaggttctatacaaaactaggcatctaaaggaaacacaaa-cagacatcaacaac 23878792  T
Q  263 aacatttgcagatcattccaccatcatacaca--------aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggatta 354  Q
    ||||  | |||||||||||||||||||||| |        |||||||||||||| |  | | |||||||||| ||||||||||| |||||  |  |||||    
T  23878793 aaca-atacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattct-attttcaatcaatttatgatcacaacaacagtatagatta 23878890  T
Q  355 agttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttcca 454  Q
    || ||||||||||||||| | || |||| | ||||||| ||||| ||||||  ||||| |||||||||||| | ||||||||||||||||||| |   ||    
T  23878891 agatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcctca 23878989  T
Q  455 aagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacct 525  Q
    | | || |||||||||||||||||  ||||||||| || || |||| ||||| ||||||||||||||||||    
T  23878990 aggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 48 - 280
Target Start/End: Original strand, 23063252 - 23063484
Alignment:
Q  48 attataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctct 145  Q
    ||||| || |||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||||||| ||||| |||| |    
T  23063252 attatgggtagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaaccttt 23063351  T
Q  146 tctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacaca 245  Q
    ||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||| | |||   |||||||||||||||||||||||    
T  23063352 tctcactccaaaa-cccaattttaatcccctgatcacccaaaacaatttccaacagatgtttacaggttcaatacttaactaggcatctaaaggaacaca 23063450  T
Q  246 aatcagccatcaacaacaacatttgcagatcattc 280  Q
    || ||| |||||||||||||| || ||||||||||    
T  23063451 aaacaggcatcaacaacaacaatt-cagatcattc 23063484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 72 - 247
Target Start/End: Original strand, 23264734 - 23264909
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgc-aaaacctacggtttcagacctcttctcactccaaaaacccaattttaa 170  Q
    ||||||||||||||| |  |||||||||| ||||| ||||||||    ||| ||||||||||| ||||||||  |||||||||| |||||||||||||||    
T  23264734 tcgcttaagcgacgggtcgttcgcttaagtgaccattcatctggactttgcaaaaacctacgggttcagaccctttctcactcc-aaaacccaattttaa 23264832  T
Q  171 tcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  23264833 tcccctgatcacccaaaatgttttccaacagaagtttacaggtccaatacacaactaggcatctaaaggaacacaaa 23264909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10111 - 10293
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  10111 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 10210  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10211 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 10293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 24661159 - 24661362
Alignment:
Q  63 cttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactccaaaaac 160  Q
    |||||||||||||||||||||||| |  |||||||||||||||| |||| |||| ||||||||| || |||| |||||   || |||||| ||||||| |    
T  24661159 cttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatttgggcagtgcaaaaacttacgggtttcaactct-ttctcattccaaaa-c 24661256  T
Q  161 ccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaaca 260  Q
    ||||||||||||||| ||||| |||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||||||||| ||| ||  ||||||||    
T  24661257 ccaattttaatcccctgatcaaccaaaacgtttttcaacagatgtttacaggttcaatatacaactaggtatctaaaggaacataaaacatacatcaaca 24661356  T
Q  261 acaaca 266  Q
    ||||||    
T  24661357 acaaca 24661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 27208186 - 27208008
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctggg-tagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| |||||||||  ||   ||||| |||| |||||||| ||| ||||||||||||||||||||||    
T  27208186 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcagacttctcctcactccaaaaacccaatttt 27208087  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||| |||||||||||| |||||||| ||  ||||||||||| ||||| ||||||||||||| |||||||||||||    
T  27208086 aatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacacaactaggcatcgaaaggaacacaaa 27208008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 27210521 - 27210345
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctggg-tagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| |||||||||  ||   ||||| |||| |||||||| ||| ||||||||||||||||||||||    
T  27210521 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcaaggtaaaaacttacgatttcagacttctcctcactccaaaaacccaatttt 27210422  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacaca 245  Q
    ||||||| |||||||||||| |||||||| ||  ||||||||||| ||||| ||||||||||||| |||||||||||    
T  27210421 aatcccctgatcacccaaaacgttttccagcaattgtttacaggttctatacacaactaggcatcgaaaggaacaca 27210345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 72 - 247
Target Start/End: Original strand, 21907948 - 21908124
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactccaaaaacccaatttta 169  Q
    ||||||||||||||| |  || ||||| ||||||| ||||||||   |||||||| ||||||| ||||| |||  |||||||||||||| ||||||||||    
T  21907948 tcgcttaagcgacgggtcgtttgcttaggcgaccattcatctggactgtgcaaaaacctacgggtttcaaaccctttctcactccaaaa-cccaatttta 21908046  T
Q  170 atcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    |||||| ||||||||| ||||||| | ||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  21908047 atcccctgatcacccagaatgtttcctaacagatgtttacagttccaatacacaactaggcatctaaaggaacacaaa 21908124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 70 - 248
Target Start/End: Original strand, 26884797 - 26884975
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag--tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattt 167  Q
    |||||||||||||| ||    ||||||||||||| || ||||||||| ||  || ||||| |||| |||||||| |||  |||||||||||| |||||||    
T  26884797 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaggatg-aaaacttacgatttcagacttctcttcactccaaaaatccaattt 26884895  T
Q  168 taatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaat 248  Q
    |||||||| |||||||||||| |||||||| || |||||||||||||||||| ||||||||||| | ||||||||||||||    
T  26884896 taatcccctgatcacccaaaacgttttccagca-atgtttacaggtcctatacacaactaggcaccgaaaggaacacaaat 26884975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 23168747 - 23168590
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgca-aaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaa 188  Q
    |||||||||||||||| ||||||||| || | | |||| ||||  |||||||| |||  ||||||||||| |||||||||||||||| ||||||||||||    
T  23168747 ttcgcttaagcgaccactcatctgggcagggtagaaacttacgattttcagacttctcatcactccaaaatcccaattttaatcccctgatcacccaaaa 23168648  T
Q  189 tgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
     |||||||| || ||||||||| |||||||| ||||||||||| | |||||||||||||    
T  23168647 cgttttccagca-atgtttacaagtcctatacacaactaggcaccgaaaggaacacaaa 23168590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 23580004 - 23579847
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgca-aaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaa 188  Q
    |||||||||||||||| ||||||||| || | | |||| ||||  |||||||| |||  ||||||||||| |||||||||||||||| ||||||||||||    
T  23580004 ttcgcttaagcgaccactcatctgggcagggtagaaacttacgattttcagacttctcatcactccaaaatcccaattttaatcccctgatcacccaaaa 23579905  T
Q  189 tgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
     |||||||| || ||||||||| |||||||| ||||||||||| | |||||||||||||    
T  23579904 cgttttccagca-atgtttacaagtcctatacacaactaggcaccgaaaggaacacaaa 23579847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 25181365 - 25181231
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    |||||||||||||||||||||||||| || | |||| ||||| ||| ||||| ||| |||||| |||||||||||||||||||||| ||||||||||||     
T  25181365 ttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcacttcaaaaacccaattttaatcccctgatcacccaaaac 25181266  T
Q  190 gttttccaacagatgtttacaggtcctatatacaac 225  Q
    |||||||   | ||||||||| |||||||| |||||    
T  25181265 gttttcc-tgaaatgtttacaagtcctatacacaac 25181231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 26583383 - 26583452
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgac 84  Q
    ||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  26583383 tcactgttcgcttaagcgaacgggtaaaatcgcattctgagcagcttgcttgaatgctcgcttaagcgac 26583452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 466 - 527
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  466 ttaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||||||| || ||||  ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 6260507 - 6260444
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  6260507 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 6260444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 599
Target Start/End: Complemental strand, 6260186 - 6260102
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    ||||||||||||||||||||||||||  | ||| ||||||  |||||||| ||| || ||||||||||| ||| ||||| |||||||    
T  6260186 ctcacccttaccttagttttgcagaatga-ttacacagcac-aatcggttcctaagccctcctctcttgttcttgctcttcttctcc 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 23063084 - 23063117
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgacc 105  Q
    |||||||||||||||||| |||||||||||||||    
T  23063084 tcgcttaagcgacggctggttcgcttaagcgacc 23063117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 25181421 - 25181384
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattat 52  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  25181421 tcactgttcgcttaagcgaacgggtaaaatcacattat 25181384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 539
Target Start/End: Complemental strand, 23168351 - 23168287
Alignment:
Q  475 ttttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    ||||||||||||||| |||||||| | ||| | ||| || ||||||||||||||  |||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23168287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 539
Target Start/End: Complemental strand, 23579608 - 23579544
Alignment:
Q  475 ttttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    ||||||||||||||| |||||||| | ||| | ||| || ||||||||||||||  |||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23579544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 537
Target Start/End: Original strand, 26885183 - 26885246
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcaga 537  Q
    ||||||||||||||||| |||| ||||||||| | ||| || ||||||||||||||  |||||||    
T  26885183 aattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 62 - 368
Target Start/End: Original strand, 3244 - 3558
Alignment:
Q  62 gcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacc 161  Q
    ||||||||| ||||||||||||||| |   ||||||||||||||| ||||||||| ||   ||||| || || ||||||||||| |||||||||||||||    
T  3244 gcttgaatgttcgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcaggcaaaaacttatgggttcagacctctcctcactccaaaaacc 3343  T
Q  162 caattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaa 261  Q
    ||| |||||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3344 caactttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttctatacacaactaggcatctaaaggaacacaaaacagccatcaacaa 3443  T
Q  262 caacatttgcagatcattccaccatcatacaca--------aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggatt 353  Q
    ||||| || ||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  3444 caacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagatt 3543  T
Q  354 aagttttcattctga 368  Q
    |||||||||||||||    
T  3544 aagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 184; Significance: 3e-99; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 9 - 525
Target Start/End: Complemental strand, 4147 - 3624
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| |||| |||| |||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||||| || ||||| |    
T  4147 gctcgctcacggttcgcttaagcgaacgggcaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgactggttcgcttgagtgaccatt 4048  T
Q  109 catctgggtagtgca-aaacctacgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
    |||||||| |||||| |||||||||| |||||   |||||| |||||| |||||||||||| ||||||| |||||||||||| |||||||| ||||||||    
T  4047 catctgggcagtgcagaaacctacggttttcaactctcttcacactcc-aaaacccaatttcaatcccctgatcacccaaaacgttttccagcagatgtt 3949  T
Q  207 tacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aat 297  Q
    ||||||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||  | || ||||||||||||||||||| |        |||    
T  3948 tacaggttctatacacaactaggcatctaaaggaaacacaaa-cagacatcaacaacaaca-atacaaatcattccaccatcatacaaaacttcatcaat 3851  T
Q  298 tcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgat 397  Q
    ||||||||||| | || | |||||||||| ||||||||||| |||||  |  ||||||| |||||||| |||||| | || |||| | ||||||| ||||    
T  3850 tcatccaatcaattat-attttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataattaacatgat 3752  T
Q  398 cgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattat-g 496  Q
    | ||||||| | ||| |||||||||||||||||||||||||||||||||  |   ||| | || |||||||||||||||||| ||||||| | |||||      
T  3751 cattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattacatattatct 3653  T
Q  497 attattgagacatagtctcacccttacct 525  Q
    |||| ||||| ||||||||||||||||||    
T  3652 attaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 183; Significance: 1e-98; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 92 - 599
Target Start/End: Original strand, 30466 - 30982
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||||| ||||||||| || |||||| ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30466 tcgcttaagcgaccactcatctgggcagggcaaaaacctacgggtccagacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaatg 30565  T
Q  191 ttttccaacagatgtttacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgcagatcattccaccatcat 289  Q
    ||| ||||||||||||||||||| |||||| |||||||||||||||||| |||||||| ||| |||||||||||||| || ||||||||||||| | |||    
T  30566 tttcccaacagatgtttacaggttctatatgcaactaggcatctaaaggaaacacaaa-caggcatcaacaacaacaatt-cagatcattccacaaccat 30663  T
Q  290 ---------acacaaattcatccaatcactcataaatttcaa--tcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatg 378  Q
              ||| ||||||||||| || |  | |||| |||  |||| || |||||||| |||||  |  ||||| |  ||||||||| |||| |  |     
T  30664 tacaaaaccccaccaattcatccaaccaattct-aattacaatttcaaattgtgatcacatcaacattatagattaggaattcattctgcacatcacttt 30762  T
Q  379 acaagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttattttccaaagctatgcaattaggtcaattt 477  Q
    |||| | | ||||| |||||||||| |  ||||| ||| ||||||||||||||||||| |||||| ||||  ||||||| ||||||||||||||||||||    
T  30763 acaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattt 30862  T
Q  478 tcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctct 577  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||| ||||||  ||||| || ||||||||||||||    
T  30863 tcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcag-aaggattacacagca-aaatcgattcctaggctctcctct 30960  T
Q  578 cttggtctggctctgcttctcc 599  Q
    |||| ||| ||||| |||||||    
T  30961 cttgttcttgctcttcttctcc 30982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 191 - 599
Target Start/End: Original strand, 3 - 414
Alignment:
Q  191 ttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaa-caacatttgcagatcattccaccatcat 289  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||| || |||||||||| |||||  | ||||||| |||||||| ||    
T  3 ttttccagcagatgtttacaggtcctatatacaactaagcatctaaggaaacacaaaacaaccatcaacaatcaacaaatacagatcactccaccattat 102  T
Q  290 aca------ca--aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgaca 381  Q
    |||      ||  |||| |||||| || |||||| |||||| ||| ||||||||||| ||| ||||  |||||||| |||| ||||||||  |||  |||    
T  103 acaattattcatcaatttatccaaccaatcataa-tttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataataca 201  T
Q  382 agagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcag 481  Q
    ||| ||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  202 agaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcag 299  T
Q  482 aaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttg 581  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||  ||||||| |||||| | ||||| |||||||||||||||||| |    
T  300 aaattatagattatggttattgagagatagtctcacccttaccttagttttgcag--aaaattagacagcaaggatcgg-ttctaggctctcctctctag 396  T
Q  582 gtctggctctgcttctcc 599  Q
     | ||||||| |||||||    
T  397 ctttggctcttcttctcc 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 162; Significance: 4e-86; HSPs: 6)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 9 - 241
Target Start/End: Original strand, 565 - 797
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||    
T  565 gctcgctcactgttcgcttaagcgaacgggcaaaatcgcattttgggcagcttgcttgaatgttcgcttaagcgacggctacttcgcttaagcgactaat 664  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  665 catctggc-agtgcaaaaacctacggtttcagaccccttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgttt 763  T
Q  208 acaggtcctatatacaactaggcatctaaaggaa 241  Q
    ||||||||||||||||||||||  ||||||||||    
T  764 acaggtcctatatacaactaggtgtctaaaggaa 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 9 - 241
Target Start/End: Original strand, 7710 - 7942
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||    
T  7710 gctcgctcactgttcgcttaagcgaacgggcaaaatcgcattttgggcagcttgcttgaatgttcgcttaagcgacggctacttcgcttaagcgactaat 7809  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  7810 catctggc-agtgcaaaaacctacggtttcagaccccttctcactccaaaaacccaattttaatcccctgatcacccaaaatgttttccagcagatgttt 7908  T
Q  208 acaggtcctatatacaactaggcatctaaaggaa 241  Q
    ||||||||||||||||||||||  ||||||||||    
T  7909 acaggtcctatatacaactaggtgtctaaaggaa 7942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 445 - 532
Target Start/End: Original strand, 904 - 991
Alignment:
Q  445 ttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagtttt 532  Q
    |||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 445 - 532
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  445 ttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagtttt 532  Q
    |||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 813 - 889
Alignment:
Q  295 aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacat 372  Q
    |||| |||||||| ||||||| || ||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  813 aatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacat 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 7958 - 8034
Alignment:
Q  295 aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacat 372  Q
    |||| |||||||| ||||||| || ||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  7958 aatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacat 8034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 159; Significance: 2e-84; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 23120 - 22862
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| ||||||||||| |  ||||||||||| | | ||||||||||||||||||||||||||||||| |  |||||||||||||||| |    
T  23120 gctcgctcactgttcgcttaagcgaactgacaaaatcgcattctggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccatt 23021  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||||||||||||| ||||||| || | |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  23020 catctgggtagtgcaaaaacctacgggtttaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgttt 22921  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||  ||||||||||||||    
T  22920 acaggtccgatacacaactaggcatctaaaggaacacaaaacatgcatcaacaacaaca 22862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 124 - 266
Target Start/End: Complemental strand, 15346 - 15204
Alignment:
Q  124 aaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatataca 223  Q
    |||||||||| || | |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||    
T  15346 aaacctacgggtttaaacctcttctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttccagcagatgtttacaggtcctatacaca 15247  T
Q  224 actaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  15246 actaggcatctaaaggaacacaaaacaggcatcaacaacaaca 15204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 474 - 585
Target Start/End: Complemental strand, 22646 - 22537
Alignment:
Q  474 attttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctc 573  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||| | |||||||||| | ||  ||||||  |||||||| |||||||||     
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaata-ttgcacagcaa-aatcggttcctaggctctt 22549  T
Q  574 ctctcttggtct 585  Q
    ||||||||||||    
T  22548 ctctcttggtct 22537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 9e-84; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 218 - 527
Target Start/End: Complemental strand, 20437340 - 20437024
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcac 309  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||  | |||||||||||||||||||||| |        ||||||||||||||     
T  20437340 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaa 20437241  T
Q  310 tcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccattt 409  Q
    |||||| |||||||||| ||||||||||| |||||  |  ||||||||||||||||||||||||| || |||| | ||||||| |||||  ||||||||     
T  20437240 tcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattc 20437142  T
Q  410 cccttcagaatcatcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagaca 508  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20437141 ccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 20437043  T
Q  509 tagtctcacccttacctta 527  Q
    |||||||||||||||||||    
T  20437042 tagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 54 - 266
Target Start/End: Original strand, 18712373 - 18712585
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcact 152  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||| ||||||    
T  18712373 ggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctctcctcact 18712472  T
Q  153 ccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagc 252  Q
    |||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||     
T  18712473 ccaaaa-cccaattttagtcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaga 18712571  T
Q  253 catcaacaacaaca 266  Q
    ||||||||||||||    
T  18712572 catcaacaacaaca 18712585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 414 - 599
Target Start/End: Original strand, 41111977 - 41112159
Alignment:
Q  414 tcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtc 513  Q
    ||||||||||||||||||||||||  |||  ||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  514 tcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttggtctggctctgcttctcc 599  Q
    |||||||||||||||||||||||  ||||||| |||||| | |||| ||||||||||||||||||| | ||| ||||| |||||||    
T  41112076 tcacccttaccttagttttgcag--aaaattagacagcaaggatcgatttctaggctctcctctctagctcttgctcttcttctcc 41112159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 20851653 - 20851471
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20851653 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 20851554  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  20851553 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 20851471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 20858280 - 20858098
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20858280 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctg 20858181  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  20858180 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 20858098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 21705810 - 21705992
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  21705810 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatctg 21705909  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21705910 ggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 21705992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 21710353 - 21710535
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||||||||||||| |||| | || || |  | |||||| |||||||||| |||| ||||| |||||||||||||||||||||    
T  21710353 tcactgttcgcttaagcgaacgggtaaaatcacattctgggtagttcacgtgaatgttcgcttaagcaacggatgctttgcttaagcgaccaatcatctg 21710452  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || |  ||| ||||| ||| ||||| ||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  21710453 ggcagggtgaaagctacgattttcagacttctcctcactccaaaaacccaattttaattccctgatcacccaaaacgttttcc 21710535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 19961781 - 19961909
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||||| ||||||||| || | |||| |||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||| |    
T  19961781 tcgcttaagcgaccactcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatca-ccaaaacg 19961879  T
Q  191 ttttccaacagatgtttacaggtcctatat 220  Q
    ||||||| || |||||||||||||||||||    
T  19961880 ttttccagcaaatgtttacaggtcctatat 19961909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 70 - 246
Target Start/End: Complemental strand, 20045416 - 20045240
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    ||||||||||||||||| |  |||||||||||||| | ||||||||| || | ||||  |||| ||| ||||| |||  |||||||||||||||||||||    
T  20045416 gctcgcttaagcgacgggtagttcgcttaagcgactactcatctgggcagggtaaaagttacgattttcagacttctcatcactccaaaaacccaatttt 20045317  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaa 246  Q
    ||||||| |||||||||||| |||||||   | ||||||||||||| |||| ||||||| |||||||| | |||||||    
T  20045316 aatcccctgatcacccaaaacgttttccggga-atgtttacaggtcatatacacaactaagcatctaaggaaacacaa 20045240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 91 - 280
Target Start/End: Original strand, 11157702 - 11157891
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaa 188  Q
    ||||||||||||||| |||||||| || |||||||| || |||| ||||| |||  |||||||||||||| | |||||||||||||| |||||| |  ||    
T  11157702 ttcgcttaagcgacctatcatctgtgttgtgcaaaaacttacgggtttcaaaccctttctcactccaaaa-ctcaattttaatcccctgatcactcggaa 11157800  T
Q  189 tgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    ||| | ||||||||||||||||||| |   | ||||||||||||||||||||||||||| |||  || |||||||||| || ||||||||||    
T  11157801 tgtgtcccaacagatgtttacaggttcagaacacaactaggcatctaaaggaacacaaaacaggtattaacaacaacaatt-cagatcattc 11157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 22030225 - 22030085
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa--cctacggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||||||||||||| | |  |||||||||||||||| ||||||||| |||||||||   ||  ||||||| |||  || ||| |||     
T  22030225 gcttgcttgaatgctcgcttaagcgactggtctttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattcc- 22030127  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttcca 197  Q
    |||||||||||||||||||| |||||||||||| || |||||    
T  22030126 aaaacccaattttaatcccctgatcacccaaaacgtattcca 22030085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 463 - 540
Target Start/End: Original strand, 32651563 - 32651640
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaa 540  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 32651640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||||| | ||||||||| |||| ||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 527
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||||| |||| ||| |||||||  |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 525
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacct 525  Q
    |||||||||||||||| || | ||| |||||||||| ||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 32651310 - 32651371
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    ||||||| |||||||||||||||||| ||| ||| |||||||||||||| || ||||||||||    
T  32651310 tatacaattaggcatctaaaggaacataaaacaggcatcaacaacaacaatt-cagatcattc 32651371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 543
Target Start/End: Original strand, 21665177 - 21665208
Alignment:
Q  512 tctcacccttaccttagttttgcagaaaaaat 543  Q
    ||||||||||||||||||||||||||||||||    
T  21665177 tctcacccttaccttagttttgcagaaaaaat 21665208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Complemental strand, 19665877 - 19665847
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaat 543  Q
    |||||||||||||||||||||||||||||||    
T  19665877 ctcacccttaccttagttttgcagaaaaaat 19665847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 19860170 - 19860199
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  19860170 ctcacccttaccttagttttgcagaaaaaa 19860199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 16372689 - 16372737
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  16372689 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 16372737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 155; Significance: 5e-82; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 74 - 525
Target Start/End: Complemental strand, 3753 - 3295
Alignment:
Q  74 gcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacgg-tttcagacctcttctcactccaaaaacccaattttaatc 172  Q
    ||||||||||||| |  |||||||||||||| |  |||||||   ||||||||||||||| |||||||||  ||| |||||||||| |||||||||||||    
T  3753 gcttaagcgacgggtcgttcgcttaagcgactatgcatctggactgtgcaaaacctacgggtttcagaccctttcccactccaaaa-cccaattttaatc 3655  T
Q  173 ccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaagg-aacacaaatcagccatcaacaacaacatttgc 271  Q
    ||| |||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||  | |    
T  3654 ccctgatcgcccaaaacgttttccagcagatgtttacaggtcctatacacaactaggcatctaaaggaaacacaaa-cagacatcaacaacaaca-atac 3557  T
Q  272 agatcattccaccatcatacaca--------aattcatccaatcactcataaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcat 363  Q
    ||||||||||||||||||||| |        |||||||||||||| | || | |||||||||| || ||||||||||||||  |  ||||||| ||||||    
T  3556 agatcattccaccatcatacaaaacttcatcaattcatccaatcaattat-attttcaatcaatttgtgatcacagcaacagtatagattaagatttcat 3458  T
Q  364 tctgaacattatatgacaagagaattaacctga-tcgttacccatttcccttcagaatcatcatcaaaccctaaccctcaatttattttccaaagctatg 462  Q
    ||||||||| | || |||| | ||||||| ||| || ||||||| ||||| |||||||||||||||||||||||||||||||||  |  |||| | || |    
T  3457 tctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatccccaaggttaag 3359  T
Q  463 caattaggtcaattttcagaaattatagattat-gattattgagacatagtctcacccttacct 525  Q
    ||||||||||||||||| ||||||| | |||||  |||| ||||| ||||||||||||||||||    
T  3358 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 154; Significance: 2e-81; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 24051 - 23858
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggtttcagacctcttctcactc 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  24051 ggcagcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcatacctcttctcactc 23952  T
Q  154 caaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||| | |||||||||||||    
T  23951 caaaaacccaattttaatcccctgatcacccaaaatgttttccagcaattgtttacaggtcctatacacaactaggcaccgaaaggaacacaaa 23858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 539
Target Start/End: Complemental strand, 23624 - 23558
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    ||||||||||||||||| |||||||| ||| | | ||| || ||||||||||||||  |||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaaa 23558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 41055 - 40816
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| ||||||||| ||||||||||| |  ||||||||||| | ||||||||||||||||||||||||||||||||| |  |||||||||| ||||| |    
T  41055 gctcgctcactgttcccttaagcgaactgacaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagtgaccatt 40956  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| |||||||||    
T  40955 catctgggcagtgcaaaagcctacgggttcaaacctcttctcactccaaaagcccaattttaatcccctgatcacccaaaacgttttccagcagatgttt 40856  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  40855 acaggtcctatacacaactaggcatctaaaggaacacaaa 40816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 472 - 581
Target Start/End: Complemental strand, 40587 - 40480
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctc 571  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||| ||| |||  ||||||  |||||||| ||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcag-aaagattgcacagca-aaatcggttcctaggctc 40490  T
Q  572 tcctctcttg 581  Q
    | ||||||||    
T  40489 ttctctcttg 40480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 148; Significance: 8e-78; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 134 - 533
Target Start/End: Complemental strand, 2133 - 1727
Alignment:
Q  134 tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggca-t 232  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2133 tttcagacttcttctcactccaaaaaccccattttaatcccctgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatt 2034  T
Q  233 ctaaaggaacacaaatcagccatcaacaacaacatttgcag-atcattccaccatcatacacaaattcatccaatc-----actcat--aaatttcaatc 324  Q
     ||||| ||||||| ||| ||||||||||||||| || ||| ||||||| |||||||| |  | ||||||| | ||     | ||||   || |||||||    
T  2033 ataaagaaacacaattcaaccatcaacaacaacaattacagaatcattctaccatcatcccaatattcatcaattcatacaattcatcacaaattcaatc 1934  T
Q  325 aagttat-gatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatcat 423  Q
    |  | || |||  |||||||| || |||||||| ||||||||| ||||||| ||  | ||| || |||| | ||| |||| ||||  || ||||||||||    
T  1933 agttaatggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcat 1836  T
Q  424 catcaaaccctaaccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttac 523  Q
    ||||||||||||||  |||  |||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1835 catcaaaccctaactttcatattattttccaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttac 1737  T
Q  524 cttagttttg 533  Q
    ||||||||||    
T  1736 cttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 337 - 533
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  337 cagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatcatcatcaaaccctaa 436  Q
    |||||||| || |||||||| ||||||||| ||||||| ||  | ||| || |||| | ||| |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  437 ccctcaatttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttg 533  Q
    |  |||  |||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 230 - 528
Target Start/End: Complemental strand, 10500 - 10195
Alignment:
Q  230 catctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcactcataaatttca 321  Q
    |||||||||||||| ||| ||  ||||||||||||||  | ||||||| |||||||||||||| |        |||||||||||||| |||||| |||||    
T  10500 catctaaaggaacataaaacacgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttca 10402  T
Q  322 atcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatc 421  Q
    ||||| ||||||||||| |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  |||||||| |||| |||||||    
T  10401 atcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatc 10303  T
Q  422 atcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcaccct 520  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10302 atcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccaccct 10203  T
Q  521 taccttag 528  Q
    ||||||||    
T  10202 taccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 230 - 528
Target Start/End: Complemental strand, 1830 - 1525
Alignment:
Q  230 catctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattccaccatcatacaca--------aattcatccaatcactcataaatttca 321  Q
    |||||||||||||| ||| ||  ||||||||||||||  | ||||||| |||||||||||||| |        |||||||||||||| |||||| |||||    
T  1830 catctaaaggaacataaaacacgcatcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataa-tttca 1732  T
Q  322 atcaagttatgatcacagcaacaacaaggattaagttttcattctgaacattatatgacaagagaattaacctgatcgttacccatttcccttcagaatc 421  Q
    ||||| ||||||||||| |||||  |  ||||||||||||||||| ||||||| || |||| ||||||||| |||||  |||||||| |||| |||||||    
T  1731 atcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatc 1633  T
Q  422 atcatcaaaccctaaccctcaatttattttccaaag-ctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcaccct 520  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  1632 atcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccaccct 1533  T
Q  521 taccttag 528  Q
    ||||||||    
T  1532 taccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 138; Significance: 8e-72; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 54 - 266
Target Start/End: Complemental strand, 102410 - 102197
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcact 152  Q
    |||| ||||||||| |||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||    
T  102410 ggcaacttgcttgagtgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctcttctcact 102311  T
Q  153 ccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagc 252  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||     
T  102310 ccaaaaacccaattttaatcccctgatcacccataacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacagg 102211  T
Q  253 catcaacaacaaca 266  Q
    ||||||||||||||    
T  102210 catcaacaacaaca 102197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 129; Significance: 2e-66; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 54 - 280
Target Start/End: Complemental strand, 15480 - 15254
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcac 151  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||||||| ||||| |||| |||||||    
T  15480 ggcagctagcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaaccttttctcac 15381  T
Q  152 tccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcag 251  Q
    ||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||    
T  15380 tccaaaa-cccaattttaatcccctgatcacccaaagcgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacag 15282  T
Q  252 ccatcaacaacaacatttgcagatcattc 280  Q
     |||||||||||||| || ||||||||||    
T  15281 gcatcaacaacaacaatt-cagatcattc 15254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||||| |||| ||| |||||||  |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Original strand, 26892 - 26922
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaat 543  Q
    |||||||||||||||||||||||||||||||    
T  26892 ctcacccttaccttagttttgcagaaaaaat 26922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 9 - 280
Target Start/End: Complemental strand, 534 - 264
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaat 108  Q
    ||||| |||| ||||||||||||||||   |||||    ||| | ||||||||||||||||||||||||||||||||| |  ||||||||||| |||| |    
T  534 gctcgctcacagttcacttaagcgaacttctaaaacataattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcaaccatt 435  T
Q  109 catctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgttt 207  Q
    |||||||| ||||||||| ||||||| ||||  |||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||    
T  434 catctgggcagtgcaaaaacctacgggttcaaccctcttctcactccaaaa-cccaattttaatcccccgattacccaaaacattttccaacagatgttt 336  T
Q  208 acaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    |||||| | ||| ||||||||||||||||||||||||||| ||  ||| |||||||||| || ||||||||||    
T  335 acaggttcaatacacaactaggcatctaaaggaacacaaaacatgcattaacaacaacaatt-cagatcattc 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 113; Significance: 6e-57; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 54 - 280
Target Start/End: Original strand, 16396 - 16619
Alignment:
Q  54 ggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcact 152  Q
    ||||||||||||||||| ||||||||||||||| |  |||||||  ||||||| |||||| || || |||||| ||||||| |||| |||||||||||||    
T  16396 ggcagcttgcttgaatgttcgcttaagcgacgggtcgttcgctt--gcgaccattcatctaggcagcgcaaaaacctacgggttcaaacctcttctcact 16493  T
Q  153 ccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagc 252  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||| |||     
T  16494 ccaaaa-cccaattttgatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatacacaactaggcatctaaaggaacgcaaaacagg 16592  T
Q  253 catcaacaacaacatttgcagatcattc 280  Q
    |||||||||||||| || ||||||||||    
T  16593 catcaacaacaacaatt-cagatcattc 16619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 109; Significance: 2e-54; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 57 - 280
Target Start/End: Complemental strand, 34755 - 34533
Alignment:
Q  57 agcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactcca 155  Q
    ||||||| ||||||||| |||||||||||| |  |||||||||||||||| ||||||||| ||||||||| ||||||| ||||  |||||||||||||||    
T  34755 agcttgcgtgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaccctcttctcactcca 34656  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| | |||||||||||||| ||| |||||||| |||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||| ||  |||    
T  34655 aaa-ctcaattttaatcccctgattacccaaaacgttttccaacagatatttacaggttcaatacacaactaggcatctaaaggaacacaaaacaagcat 34557  T
Q  256 caacaacaacatttgcagatcattc 280  Q
     |||||||||| || ||||||||||    
T  34556 taacaacaacaatt-cagatcattc 34533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||||||||||||||| | ||||||||| |||| ||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 35774 - 35711
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  35774 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 35711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 108; Significance: 6e-54; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 58 - 264
Target Start/End: Original strand, 1395 - 1601
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acggtttcagacctcttctcactccaa 156  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| |||||| || ||||||||| || ||||||||| |||  |||||| | |||    
T  1395 gcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctaggcagtgcaaaaacttacggtttcaaaccctttctcattacaa 1494  T
Q  157 aaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatc 256  Q
    || |||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||  || |    
T  1495 aa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaacataaagcatgcagc 1593  T
Q  257 aacaacaa 264  Q
    ||||||||    
T  1594 aacaacaa 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 134979 - 135201
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| |||| ||||||||||||||||||||| | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  134979 gttcgcttaggcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcag 135078  T
Q  120 tgcaaaacctacg-gtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctat 218  Q
     | |||| |||||  ||||| || ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||   | ||||||||| |||||||    
T  135079 ggtaaaagctacgattttcaaacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc-tgaaatgtttacaagtcctat 135177  T
Q  219 atacaactaggcatctaaaggaaca 243  Q
    | ||||| || |||| |||||||||    
T  135178 acacaaccagacatc-aaaggaaca 135201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 11524 - 11278
Alignment:
Q  20 gttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||| ||||||||||||| ||||| |  ||| ||||  ||| ||||||||||||||||||||||| | |   ||||| ||||||| | ||||||||| ||    
T  11524 gttcgcttaagcgaacggctaaaaacaaattctaggttgctagcttgaatgctcgcttaagcgacaggtagctcgctcaagcgacaactcatctgggcag 11425  T
Q  120 tgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctat 218  Q
     | |||| |||||| |||||||| ||| ||||||||||| || |||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||    
T  11424 ggtaaaaacctacgatttcagacttctcctcactccaaacacgcaattttaatcccctgatcacc-aaaatgttttccagcaaatgtttacaggtcctat 11326  T
Q  219 atacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    | |||  |||||||||||||||||||||| ||| ||||||||||||||    
T  11325 acacagttaggcatctaaaggaacacaaaacagacatcaacaacaaca 11278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 116507 - 116664
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaa 188  Q
    |||||||||||||||| ||||||||   |||||||| ||||||| |||||||||  |||||||||||||| |||||||||||||||| ||||||||||||    
T  116507 ttcgcttaagcgaccattcatctggactgtgcaaaaacctacgggtttcagaccctttctcactccaaaa-cccaattttaatcccctgatcacccaaaa 116605  T
Q  189 tgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  116606 tgttttccaacagatgtttacaggtccaatacacaactaggcatctaaaggaacacaaa 116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 266
Target Start/End: Complemental strand, 129136 - 128927
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-ac-ggtttcagacctct-tctcactcc 154  Q
    |||| |||||||||||||||||||||||| |  |||||||||||||  | ||||||| | ||||||||| || || ||||||| || ||| ||||| |||    
T  129136 gcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgattattcatctgagcagtgcaaaaacttacaggtttcaaac-tctctctcattcc 129038  T
Q  155 aaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagcca 254  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||  ||    
T  129037 aaaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcaatatacaactaggcatctaaaggaacataaaacataca 128939  T
Q  255 tcaacaacaaca 266  Q
    ||||||||||||    
T  128938 tcaacaacaaca 128927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 463 - 540
Target Start/End: Original strand, 116887 - 116964
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaaa 540  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 116266 - 116299
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgacc 105  Q
    |||||||||||||||||| |||||||||||||||    
T  116266 tcgcttaagcgacggctggttcgcttaagcgacc 116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 51822 - 52032
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactcca 155  Q
    |||| |||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||| || |||| |||||  ||  |||||| || |    
T  51822 gcttccttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcaacccctttctcattc-a 51920  T
Q  156 aaaacccaattttaatccccc-gatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagcca 254  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |  || |||||||||||||| |||||||| ||| ||| ||    
T  51921 aaaacccaattttaatccccctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatcttaaggaacataaaacaggca 52020  T
Q  255 tcaacaacaaca 266  Q
    ||||||||||||    
T  52021 tcaacaacaaca 52032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 266
Target Start/End: Complemental strand, 81692 - 81483
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactcca 155  Q
    |||| |||||||||||||||||||||||| |  |||||||| ||||||| |||| |||| ||||||||| || |||| |||||  ||  |||||| ||||    
T  81692 gcttacttgaatgctcgcttaagcgacgggttgttcgcttatgcgaccattcatttgggcagtgcaaaaacttacgggtttcaacccctttctcattcca 81593  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |  || ||||||||||||||||||||||| ||| ||| |||    
T  81592 aaa-cccaattttaatcccctgatcacccaaaacgttttccaacagatgtttacaggttcagtacacaactaggcatctaaaggaacataaaacaggcat 81494  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  81493 caacaacaaca 81483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 80017 - 79783
Alignment:
Q  9 gctcgttcactgttcacttaagcgaacgggtaaaatcgcatta-taggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaa 107  Q
    ||||| ||||||||| |||||||||||||||||||||  |||  | |||||||  | |||||| ||||||||||||||| |||||||||||||||||||     
T  80017 gctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagcta-catgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccac 79919  T
Q  108 tcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtt 206  Q
    ||||||||| || | ||||  |||| ||| ||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| | | |||||    
T  79918 tcatctgggcagggtaaaagttacgattttcagacttctcctcactccaaaaacccagttttaatcccctgatcacccaaaacgttttcc-agaaatgtt 79820  T
Q  207 tacaggtcctatatacaactaggcatctaaaggaaca 243  Q
    |||| |||||||||||||  || |||| |||||||||    
T  79819 tacaagtcctatatacaatcagacatcaaaaggaaca 79783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 92 - 266
Target Start/End: Complemental strand, 18874 - 18700
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaacct-acggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||||| ||||||||| ||||||||| || ||||||||| |||  |||||| ||||||| |||||||||||||||| |||||||||||| |    
T  18874 tcgcttaagcgaccattcatctgggcagtgcaaaaacttacggtttcaaaccctttctcattccaaaa-cccaattttaatcccctgatcacccaaaacg 18776  T
Q  191 ttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||| ||| ||  ||||| ||||||||    
T  18775 ttttccaacagatgtttacacgttcaatatacaactaggcatctaaaggaacataaaacattcatcatcaacaaca 18700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 4192 - 4011
Alignment:
Q  15 tcactgttcacttaagcgaacgggtaaaatcgcattataggcagcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctg 114  Q
    ||||||||| ||||||||||| |||||||||| ||| | ||||| || | |||||| ||||||||||||||||||||||||||||||||||||||||||     
T  4192 tcactgttcgcttaagcgaacaggtaaaatcgtattctgggcag-ttacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatcta 4094  T
Q  115 ggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttcc 196  Q
    || || | ||||  |||| ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  4093 ggcagggtaaaagttacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacgttttcc 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 91; Significance: 8e-44; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 1645 - 1854
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacct-acgg-tttcagacctcttctcactcca 155  Q
    |||| ||||||||||||||||||||||||    |||||||||||||||| ||||||||| ||||||||| || |||| ||||| |||  |||||| ||||    
T  1645 gcttacttgaatgctcgcttaagcgacgggacgttcgcttaagcgaccattcatctgggcagtgcaaaaacttacgggtttcaaaccctttctcattcca 1744  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| |||||||||||| ||||||||  | |||||||||||| ||||||| ||  ||||||||||||||||||||| ||  |||    
T  1745 aaa-cccaattttaatcccctgatcacccaaaacgttttccataaaatgtttacaggttctatatataataaggcatctaaaggaacacaaaacatgcat 1843  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  1844 caacaacaaca 1854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 65686 - 65836
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa--cctacgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaa 188  Q
    ||||||||||||||  ||||||||| |||||||||  ||||||| ||||| |||  ||| |||||||||| |||||||||||||||  ||||||||||||    
T  65686 tcgcttaagcgaccgttcatctgggcagtgcaaaaaacctacgggtttcaaaccctttcccactccaaaa-cccaattttaatcccttgatcacccaaaa 65784  T
Q  189 tgttttccaacagatgtttacaggtcctatatacaactaggcatctaaagga 240  Q
     ||||||||||| |||||||||||| | ||| |||||| |||| ||||||||    
T  65785 cgttttccaacaaatgtttacaggttcaatacacaactgggcacctaaagga 65836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 92 - 280
Target Start/End: Original strand, 998 - 1186
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacgg-tttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    ||||||||||| ||| ||||||||| ||||||||| ||||||| ||||| |||  |||||||||||||| || ||||||||||||| ||||||||||||     
T  998 tcgcttaagcggccattcatctgggcagtgcaaaaacctacgggtttcaaaccctttctcactccaaaa-cctaattttaatcccctgatcacccaaaac 1096  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaacatttgcagatcattc 280  Q
    ||||||||| ||||||||| |||| | ||| | ||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||    
T  1097 gttttccaatagatgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcatcaacaacaacaatt-cagatcattc 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  464 aattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    |||||| |||||||||| |||||||| || ||||| ||||| | ||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 756 - 789
Alignment:
Q  72 tcgcttaagcgacggctgcttcgcttaagcgacc 105  Q
    |||||||||||||||||| |||||||||||||||    
T  756 tcgcttaagcgacggctggttcgcttaagcgacc 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 91 - 266
Target Start/End: Original strand, 967 - 1143
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    |||||||||||||| | ||||||||| || | |||| |||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||     
T  967 ttcgcttaagcgactactcatctgggcagggtaaaaacctacgatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaac 1066  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
     ||||||| |   ||||||||||||||| | ||||||||||||| || |||| ||||| ||| ||||||||||||||    
T  1067 attttccagcgattgtttacaggtcctaaacacaactaggcatcaaagggaatacaaaacagacatcaacaacaaca 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 81; Significance: 8e-38; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 72895 - 73051
Alignment:
Q  92 tcgcttaagcgaccaatcatctgggtagtgcaaaa-cctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatg 190  Q
    ||||||||||||||| ||||| ||| ||  ||||| |||||  |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |    
T  72895 tcgcttaagcgaccactcatccgggcaggacaaaaacctactatttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaacg 72994  T
Q  191 ttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||| ||  ||||||||||||||||| |||||||| |||| |||||||||||||    
T  72995 ttttccagcaattgtttacaggtcctatacacaactagacatcgaaaggaacacaaa 73051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 525
Target Start/End: Original strand, 73224 - 73337
Alignment:
Q  413 ttcagaatcatcatcaaaccctaaccctcaattt-attttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatag 511  Q
    |||| ||||| ||||| |||||||  |||||||| || ||| | |||||| | ||||| | |||||||| |||||||| |||||||| ||||| | |||     
T  73224 ttcaaaatcaacatcacaccctaattctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataa 73323  T
Q  512 tctcacccttacct 525  Q
    || |||||||||||    
T  73324 tcccacccttacct 73337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 58 - 266
Target Start/End: Complemental strand, 3105 - 2896
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    |||||||||||||| |||| |||||| || |  |||||||||||||||| ||||||||| ||||||||| ||    ||||||| |||  |||||||||||    
T  3105 gcttgcttgaatgcgcgctcaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttctcactcca 3006  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| || ||||||||||||| |||||||||||| || |||||| |||||||||||||| |  ||| |||| ||||||||||||||||||||| ||  |||    
T  3005 aaatcc-aattttaatcccctgatcacccaaaacgtattccaaaagatgtttacaggttcattatgcaacaaggcatctaaaggaacacaaaacatgcat 2907  T
Q  256 caacaacaaca 266  Q
    |||||| ||||    
T  2906 caacaaaaaca 2896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 527
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||| ||||| ||||| || |||||||  ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 121479 - 121688
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    |||||||||||||||||||||||||||||    |||||||||||||||| ||||||||| ||||||||| ||    ||||||| |||  || ||| ||||    
T  121479 gcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattcca 121578  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| |||||||||||| || |||||| ||||||||| |||| |  |||||||  ||||||||||||||||||||| ||  |||    
T  121579 aaa-cccaattttaatcccctgatcacccaaaacgtattccaaaagatgtttaaaggttcattatacaataaggcatctaaaggaacacaaaacatgcat 121677  T
Q  256 caacaacaaca 266  Q
    || ||||||||    
T  121678 cagcaacaaca 121688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 132356 - 132565
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    |||||||||||||||||||||||||||||    |||||||||||||||| ||||||||| ||||||||| ||    ||||||| |||  || ||| ||||    
T  132356 gcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaaactctcgggtttcaaaccctttttcattcca 132455  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccat 255  Q
    ||| |||||||||||||||| |||||||||||| || |||||  ||||||||| |||| |  |||||||  |||||||||||||||||||||  |  |||    
T  132456 aaa-cccaattttaatcccctgatcacccaaaacgtattccagaagatgtttataggttcattatacaataaggcatctaaaggaacacaaaatatgcat 132554  T
Q  256 caacaacaaca 266  Q
    |||||||||||    
T  132555 caacaacaaca 132565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 70 - 248
Target Start/End: Complemental strand, 493492 - 493314
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag--tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattt 167  Q
    |||||||||||||| ||    ||||||||||||| || ||||||||| ||  || ||||| |||| |||||||| |||  ||||||||||||||||||||    
T  493492 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaggatg-aaaacttacgatttcagacatctcttcactccaaaaacccaattt 493394  T
Q  168 taatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaat 248  Q
    |||||||| | |||||||||| |||||||| || |||||||||||||||||| ||||||||||| | ||||||||||||||    
T  493393 taatcccctggtcacccaaaacgttttccagca-atgtttacaggtcctatacacaactaggcaccgaaaggaacacaaat 493314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 525341 - 525475
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctac--ggtttcagacctcttctcactcca 155  Q
    ||||||||||||||||| | |||||| || |  |||||||||||||||| |||||| || ||||||||| ||    ||||||| |||  || ||||||||    
T  525341 gcttgcttgaatgctcgttcaagcgatgggtcgttcgcttaagcgaccattcatctcggcagtgcaaaaactctcaggtttcaaaccctttatcactcca 525440  T
Q  156 aaaacccaattttaatcccccgatcacccaaaatgt 191  Q
    ||| |||||||||||||||  |||||||||||||||    
T  525441 aaa-cccaattttaatcccttgatcacccaaaatgt 525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 537
Target Start/End: Complemental strand, 493082 - 493019
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcaga 537  Q
    ||||||||||||||||| |||| ||||||||| | ||| |||||||||||||||||  |||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 11016 - 10838
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggta-gtgcaaaacctacggtttcagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    ||||||||||||| || ||||||||| | |   ||||| |||| |||||||| ||| ||||||||  ||||||||||||    
T  11016 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaagataaaaacttacgatttcagacttctcctcactccttaaacccaatttt 10917  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaa 247  Q
    ||||||| |||||||||||| |||||||| ||  ||||||||||||||||| | ||||||||||| |||||||||||||    
T  10916 aatcccctgatcacccaaaacgttttccagcaattgtttacaggtcctatacataactaggcatcgaaaggaacacaaa 10838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 70 - 248
Target Start/End: Original strand, 18210 - 18387
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag--tgcaaaacctacggtttcagacctcttctcactccaaaaacccaattt 167  Q
    |||||||||||||| ||    ||||||||||||| || ||||||||| ||  || ||||| |||| |||||||| |||  |||||| |||||||||||||    
T  18210 gctcgcttaagcgatgggatgttcgcttaagcgatcactcatctgggcaggatg-aaaacttacgatttcagacttctcttcactctaaaaacccaattt 18308  T
Q  168 taatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaat 248  Q
    |||||||| ||||||| |||| |||||||| || |||||||||||||||||| ||||||||||| | ||||||||||||||    
T  18309 taatcccctgatcacc-aaaacgttttccagca-atgtttacaggtcctatacacaactaggcaccgaaaggaacacaaat 18387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 8949 - 9104
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    |||||||||||||| ||    |||||||||||||||| ||||||||| || | |||| ||||| ||| ||||| ||| ||||||||||||||||||||||    
T  8949 gctcgcttaagcgatgggatgttcgcttaagcgaccactcatctgggcagggtaaaagctacgattttcagacttctcctcactccaaaaacccaatttt 9048  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaac 225  Q
    ||||||| |||||||||||| ||||||| | | ||||||||| |||||||| |||||    
T  9049 aatcccctgatcacccaaaacgttttcc-agaaatgtttacaagtcctatacacaac 9104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 91 - 243
Target Start/End: Original strand, 320 - 473
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaat 189  Q
    |||||||||||||||| ||||||||| || | ||||  |||| ||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||     
T  320 ttcgcttaagcgaccactcatctgggcagggtaaaagttacgattttcagacttctcctcactccaaaaacccaattttaatcccctgatcacccaaaac 419  T
Q  190 gttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca 243  Q
    |||||||   |  |||||||| ||| |||| ||||||| ||||| |||||||||    
T  420 gttttccggaaattgtttacaagtcttatacacaactaagcatcaaaaggaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 439 - 539
Target Start/End: Original strand, 680 - 781
Alignment:
Q  439 ctcaatttattttccaaagctatgcaattaggtcaatttt-cagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcaga 537  Q
    |||||||||||||| | | |||| |  |||||| |||||| ||||||||||| |||| ||| ||||| | ||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  538 aa 539  Q
    ||    
T  780 aa 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 16525 - 16355
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggttt-cagacctcttctcactccaaaaacccaatttt 168  Q
    ||||||||||||||||| |  ||| |||||||||||| ||||||||| || | ||||  |||| ||| |||||   ||||||||||||||||||||||||    
T  16525 gctcgcttaagcgacgggtagttcacttaagcgaccactcatctgggcagggtaaaagttacgattttcagac---ttctcactccaaaaacccaatttt 16429  T
Q  169 aatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaaca 243  Q
    ||||||| |||||||||||| |||||||   | ||||||||| |||||||||||||| || |||| |||| ||||    
T  16428 aatcccctgatcacccaaaacgttttcc-tgaaatgtttacaagtcctatatacaaccagacatcaaaagaaaca 16355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 6546 - 6758
Alignment:
Q  58 gcttgcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggt---agtgcaaaacctac--ggtttcagacctcttctcact 152  Q
    |||| ||||||||||| || ||||||||| |  |||||||||||||||| |||||||||    |||| |||| ||    ||||||| |||  |||||| |    
T  6546 gctttcttgaatgctcactcaagcgacgggtcgttcgcttaagcgaccattcatctggggggcagtgtaaaaactctcgggtttcaaaccctttctca-t 6644  T
Q  153 ccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagc 252  Q
    || ||||| |||||||||||||| |||||||| ||| || |||||| ||||||||||| || | ||||||||  ||||||||||||||||||||| ||      
T  6645 cccaaaactcaattttaatcccctgatcacccgaaacgtattccaaaagatgtttacaagttcaatatacaataaggcatctaaaggaacacaaaacata 6744  T
Q  253 catcaacaacaaca 266  Q
    ||||||||||||||    
T  6745 catcaacaacaaca 6758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 416 - 534
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  416 agaatcatcatcaaaccctaaccctca-atttattttccaaagctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtct 514  Q
    |||||||||||||||||||||   ||| |||  ||||| ||| |||| |||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  515 cacccttaccttagttttgc 534  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 14304 - 14195
Alignment:
Q  123 aaaacctacggtttcagacctcttctcactccaaaaacccaattttaatcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatatac 222  Q
    ||||| |||| |||||||| |||   |||||||||||||||||||||||||||||||| ||||||| |||||||| |   |||||||||| | |||| ||    
T  14304 aaaacttacgatttcagacttctctccactccaaaaacccaattttaatcccccgatcgcccaaaacgttttccagcgattgtttacaggacatatacac 14205  T
Q  223 aactaggcat 232  Q
    ||||||||||    
T  14204 aactaggcat 14195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 539
Target Start/End: Original strand, 17643 - 17711
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttag-ttttgcagaaa 539  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaa 17711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 17512 - 17623
Alignment:
Q  65 tgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgc-aaaacctac-ggtttcagacctcttctcactccaaaaaccc 162  Q
    |||||| ||||||||||||||| |  |||||||||||||| | |||| ||| | |||| ||||||||| |||||||||||  ||| |||||| |||||||    
T  17512 tgaatgttcgcttaagcgacgggtcgttcgcttaagcgactattcatatggattgtgcaaaaacctacgggtttcagaccctttcccactcc-aaaaccc 17610  T
Q  163 aattttaatcccc 175  Q
    ||||| |||||||    
T  17611 aatttaaatcccc 17623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 539
Target Start/End: Original strand, 135473 - 135540
Alignment:
Q  472 caattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaa 135540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 438 - 520
Alignment:
Q  184 caaaatgttttccaacagatgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||| || |||||| |||||||||||||| |  |||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  438 caaaacgtattccaaaagatgtttacaggttcattatacaactaggcatctaaaggaacacaaaacatgcatcaacaacaaca 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  463 caattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 591 - 739
Alignment:
Q  70 gctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtagtgcaaaacctacggtttcagacctcttctcactccaaaaacccaatttta 169  Q
    |||||||||||||| ||  | |||||||||||||||| ||||||||| || | |     |||| ||||||||  || |||||||||||||||||||||||    
T  591 gctcgcttaagcgatgggaggttcgcttaagcgaccactcatctgggcagggtacttt-tacgatttcagactcctcctcactccaaaaacccaatttta 689  T
Q  170 atcccccgatcacccaaaatgttttccaacagatgtttacaggtcctatat 220  Q
    ||||||   |||||||||| | ||||||| | ||||||||| |||||||||    
T  690 atccccaattcacccaaaacg-tttccaagaaatgtttacaagtcctatat 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 539
Target Start/End: Original strand, 1453 - 1516
Alignment:
Q  476 tttcagaaattatagattatgattattgagacatagtctcacccttaccttagttttgcagaaa 539  Q
    |||||||||||||| |||| ||| |||||||  ||||||||||||||||||| |||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaaa 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 91 - 225
Target Start/End: Original strand, 12550 - 12688
Alignment:
Q  91 ttcgcttaagcgaccaatcatctgggtagtgcaaaacctacg-gtttcagacctcttctcactcc-aaaaacccaa-ttttaatcccccgatcaccc-aa 186  Q
    |||||||||||||||| ||||||||| || | || | |||||  |||||||| ||| |||||||| |||||||||| ||||||||||| |||||||| ||    
T  12550 ttcgcttaagcgaccactcatctgggcagggtaacagctacgattttcagacttctcctcactccaaaaaacccaatttttaatcccctgatcacccaaa 12649  T
Q  187 aatgttttccaacagatgtttacaggtcctatatacaac 225  Q
    ||||||||||   | ||||||||  ||||||||| ||||    
T  12650 aatgttttccttgaaatgtttacgagtcctatatgcaac 12688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 1763 - 1706
Alignment:
Q  62 gcttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggtag 119  Q
    |||||||| |||||||||||||||| |   ||||||||||||||| ||||||||||||    
T  1763 gcttgaatactcgcttaagcgacgggtagctcgcttaagcgaccactcatctgggtag 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 531
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  471 tcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttagttt 531  Q
    ||||||||| ||||||||| |||||||| |||||||  ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  499 tattgagacatagtctcacccttaccttagttttgcagaa 538  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    ||||||||||||||| | |||||||||||||  | ||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 222540 - 222477
Alignment:
Q  203 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    |||||| |||| | |||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  222540 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 222477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  473 aattttcagaaattatagattatgattattgagacatagtctcacccttacctta 527  Q
    ||||||||||||||||| ||||||| |||||| | ||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 5927 - 5857
Alignment:
Q  458 ctatgcaattaggtcaattttcagaaattatagattatgattattgagacatagtctcacccttaccttag 528  Q
    |||| ||||||| | ||||||||||||||||| ||||| || ||||| | ||| || ||||||||||||||    
T  5927 ctattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Original strand, 371400 - 371430
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaat 543  Q
    |||||||||||||||||||||||||||||||    
T  371400 ctcacccttaccttagttttgcagaaaaaat 371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 252847 - 252876
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  252847 ctcacccttaccttagttttgcagaaaaaa 252876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 259453 - 259482
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaa 542  Q
    ||||||||||||||||||||||||||||||    
T  259453 ctcacccttaccttagttttgcagaaaaaa 259482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 541
Target Start/End: Complemental strand, 11487 - 11459
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaa 541  Q
    |||||||||||||||||||||||||||||    
T  11487 ctcacccttaccttagttttgcagaaaaa 11459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 71662 - 71614
Alignment:
Q  218 tatacaactaggcatctaaaggaacacaaatcagccatcaacaacaaca 266  Q
    ||||||| |||||||||||||||||| ||| ||  ||||||||||||||    
T  71662 tatacaattaggcatctaaaggaacataaaacatgcatcaacaacaaca 71614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 170975 - 170907
Alignment:
Q  513 ctcacccttaccttagttttgcagaaaaaattatacagcaggaatcggtttctaggctctcctctcttg 581  Q
    |||||||||||||||| |||||||||| || |  ||||||  |||||||| ||||||||| ||| ||||    
T  170975 ctcacccttaccttagatttgcagaaagaaatgcacagcaaaaatcggttcctaggctcttctcccttg 170907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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