View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12721_high_25 (Length: 251)

Name: NF12721_high_25
Description: NF12721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12721_high_25
NF12721_high_25
[»] chr1 (43 HSPs)
chr1 (120-251)||(33359323-33359454)
chr1 (154-223)||(33373435-33373504)
chr1 (4-36)||(6089737-6089769)
chr1 (1-33)||(14171547-14171579)
chr1 (4-36)||(48067898-48067930)
chr1 (1-36)||(7763749-7763784)
chr1 (1-36)||(25509211-25509246)
chr1 (1-36)||(27037271-27037306)
chr1 (1-36)||(42276161-42276196)
chr1 (1-36)||(43456621-43456656)
chr1 (6-36)||(47296550-47296580)
chr1 (1-33)||(943637-943669)
chr1 (1-33)||(1039381-1039413)
chr1 (1-33)||(1046287-1046319)
chr1 (4-36)||(3549034-3549066)
chr1 (1-33)||(4102714-4102746)
chr1 (4-36)||(4280129-4280161)
chr1 (4-36)||(9413328-9413360)
chr1 (1-33)||(11741402-11741434)
chr1 (1-33)||(11907230-11907262)
chr1 (1-33)||(13343778-13343810)
chr1 (1-33)||(15811232-15811264)
chr1 (4-36)||(17483735-17483767)
chr1 (4-36)||(21631110-21631142)
chr1 (4-36)||(22940563-22940595)
chr1 (1-33)||(23541984-23542016)
chr1 (4-36)||(25227306-25227338)
chr1 (4-36)||(27037533-27037565)
chr1 (4-36)||(28885844-28885876)
chr1 (1-33)||(30289862-30289894)
chr1 (1-33)||(30290270-30290302)
chr1 (1-33)||(36694859-36694891)
chr1 (1-33)||(36710960-36710992)
chr1 (1-33)||(37951949-37951981)
chr1 (4-36)||(38613739-38613771)
chr1 (1-33)||(39363194-39363226)
chr1 (1-33)||(39497438-39497470)
chr1 (4-36)||(41317595-41317627)
chr1 (1-33)||(44649634-44649666)
chr1 (1-33)||(45039417-45039449)
chr1 (1-33)||(46075867-46075899)
chr1 (1-33)||(49907026-49907058)
chr1 (1-33)||(52431174-52431206)
[»] chr7 (29 HSPs)
chr7 (129-223)||(29701330-29701423)
chr7 (4-36)||(49045123-49045155)
chr7 (1-36)||(2290016-2290051)
chr7 (1-36)||(34012517-34012552)
chr7 (1-36)||(41444204-41444239)
chr7 (1-35)||(31769332-31769366)
chr7 (2-36)||(33381574-33381608)
chr7 (4-33)||(18113169-18113198)
chr7 (1-33)||(6387330-6387362)
chr7 (1-33)||(19920568-19920600)
chr7 (1-33)||(21295156-21295188)
chr7 (1-33)||(26255101-26255133)
chr7 (4-36)||(27813498-27813530)
chr7 (5-33)||(29176997-29177025)
chr7 (1-33)||(29286037-29286069)
chr7 (1-33)||(29643143-29643175)
chr7 (1-33)||(31458002-31458034)
chr7 (4-36)||(31581679-31581711)
chr7 (4-36)||(32118166-32118198)
chr7 (1-33)||(32814438-32814470)
chr7 (1-33)||(32872375-32872407)
chr7 (1-33)||(33858866-33858898)
chr7 (1-33)||(36698131-36698163)
chr7 (1-33)||(38858303-38858335)
chr7 (1-33)||(39197723-39197755)
chr7 (1-33)||(39871613-39871645)
chr7 (1-33)||(41026096-41026128)
chr7 (1-33)||(41252361-41252393)
chr7 (1-33)||(48521034-48521066)
[»] chr5 (26 HSPs)
chr5 (130-177)||(36311077-36311124)
chr5 (1-36)||(3028015-3028050)
chr5 (1-36)||(8949814-8949849)
chr5 (1-36)||(20988213-20988248)
chr5 (1-36)||(23092640-23092675)
chr5 (1-36)||(23260138-23260173)
chr5 (1-36)||(23286474-23286509)
chr5 (1-36)||(43060411-43060446)
chr5 (2-36)||(19571940-19571974)
chr5 (1-35)||(20987751-20987785)
chr5 (2-35)||(4902810-4902843)
chr5 (1-33)||(1265954-1265986)
chr5 (4-36)||(4976293-4976325)
chr5 (1-33)||(6673228-6673260)
chr5 (4-36)||(7734835-7734867)
chr5 (4-36)||(7940454-7940486)
chr5 (1-33)||(9828398-9828430)
chr5 (1-33)||(13660866-13660898)
chr5 (4-36)||(14435832-14435864)
chr5 (1-33)||(14913653-14913685)
chr5 (1-33)||(16127264-16127296)
chr5 (1-33)||(22527697-22527729)
chr5 (1-33)||(26894873-26894905)
chr5 (5-33)||(32147555-32147583)
chr5 (4-36)||(38371978-38372010)
chr5 (1-33)||(40004409-40004441)
[»] chr4 (42 HSPs)
chr4 (1-36)||(17339080-17339115)
chr4 (1-36)||(41191628-41191663)
chr4 (1-33)||(50424854-50424886)
chr4 (1-33)||(52870649-52870681)
chr4 (1-32)||(422928-422959)
chr4 (1-36)||(4415967-4416002)
chr4 (1-36)||(14794022-14794057)
chr4 (1-36)||(20455181-20455216)
chr4 (1-36)||(25124246-25124281)
chr4 (1-36)||(28501386-28501421)
chr4 (1-36)||(29520164-29520199)
chr4 (1-36)||(31937078-31937113)
chr4 (1-36)||(36990916-36990951)
chr4 (1-36)||(46949994-46950029)
chr4 (1-36)||(49373693-49373728)
chr4 (1-36)||(49793093-49793128)
chr4 (1-36)||(53564356-53564391)
chr4 (1-36)||(56432520-56432555)
chr4 (2-36)||(32899219-32899253)
chr4 (1-35)||(41620517-41620551)
chr4 (2-36)||(55563128-55563162)
chr4 (222-251)||(581742-581771)
chr4 (4-33)||(49228721-49228750)
chr4 (1-33)||(4035830-4035862)
chr4 (1-33)||(5375557-5375589)
chr4 (1-33)||(5743659-5743691)
chr4 (4-36)||(7698472-7698504)
chr4 (1-33)||(9328240-9328272)
chr4 (4-36)||(18872719-18872751)
chr4 (1-33)||(30771533-30771565)
chr4 (1-33)||(32032993-32033025)
chr4 (1-33)||(33413523-33413555)
chr4 (1-33)||(34273219-34273251)
chr4 (4-36)||(39670989-39671021)
chr4 (1-33)||(43387993-43388025)
chr4 (1-33)||(44294794-44294826)
chr4 (1-33)||(45742806-45742838)
chr4 (1-33)||(47228728-47228760)
chr4 (1-33)||(47806865-47806897)
chr4 (1-33)||(50352069-50352101)
chr4 (1-33)||(52977987-52978019)
chr4 (1-33)||(55632259-55632291)
[»] chr8 (28 HSPs)
chr8 (1-33)||(29598229-29598261)
chr8 (1-33)||(38878726-38878758)
chr8 (1-36)||(2152240-2152275)
chr8 (1-36)||(5162306-5162341)
chr8 (1-36)||(12802613-12802648)
chr8 (1-36)||(17069844-17069879)
chr8 (1-36)||(17578394-17578429)
chr8 (1-36)||(18641380-18641415)
chr8 (1-36)||(30140124-30140159)
chr8 (3-36)||(6050557-6050590)
chr8 (1-33)||(51095-51127)
chr8 (1-33)||(1774347-1774379)
chr8 (1-33)||(2944272-2944304)
chr8 (1-33)||(8251933-8251965)
chr8 (1-33)||(8951428-8951460)
chr8 (129-165)||(12504149-12504185)
chr8 (1-33)||(13153933-13153965)
chr8 (1-33)||(18754149-18754181)
chr8 (4-36)||(23487066-23487098)
chr8 (4-36)||(23688168-23688200)
chr8 (1-33)||(28192175-28192207)
chr8 (1-33)||(28572051-28572083)
chr8 (1-33)||(28579644-28579676)
chr8 (4-36)||(32522846-32522878)
chr8 (1-33)||(32675757-32675789)
chr8 (1-33)||(34568495-34568527)
chr8 (1-33)||(39029183-39029215)
chr8 (4-36)||(44888682-44888714)
[»] chr6 (24 HSPs)
chr6 (1-33)||(10195993-10196025)
chr6 (1-33)||(19097801-19097833)
chr6 (1-36)||(402621-402656)
chr6 (1-36)||(2090660-2090695)
chr6 (1-36)||(13901643-13901678)
chr6 (1-36)||(15498631-15498666)
chr6 (1-36)||(23604462-23604497)
chr6 (1-36)||(25045643-25045678)
chr6 (1-36)||(34915543-34915578)
chr6 (1-35)||(17227527-17227561)
chr6 (1-30)||(17175464-17175493)
chr6 (222-251)||(23158117-23158146)
chr6 (1-33)||(231105-231137)
chr6 (4-36)||(4175244-4175276)
chr6 (1-33)||(4844405-4844437)
chr6 (219-251)||(7367872-7367904)
chr6 (1-33)||(8743193-8743225)
chr6 (4-36)||(13321329-13321361)
chr6 (4-36)||(16122517-16122549)
chr6 (4-36)||(22710268-22710300)
chr6 (4-36)||(28236204-28236236)
chr6 (1-33)||(30248652-30248684)
chr6 (4-36)||(31091447-31091479)
chr6 (1-33)||(34301832-34301864)
[»] chr3 (39 HSPs)
chr3 (1-33)||(50647944-50647976)
chr3 (1-36)||(4759351-4759386)
chr3 (1-36)||(8321927-8321962)
chr3 (1-36)||(20918221-20918256)
chr3 (1-36)||(20927183-20927218)
chr3 (1-36)||(24087335-24087370)
chr3 (1-36)||(41392880-41392915)
chr3 (1-36)||(46845492-46845527)
chr3 (1-36)||(49383833-49383868)
chr3 (222-251)||(23217930-23217959)
chr3 (2-35)||(44542474-44542507)
chr3 (4-36)||(4759090-4759122)
chr3 (1-33)||(7181355-7181387)
chr3 (1-33)||(7462997-7463029)
chr3 (1-33)||(9499497-9499529)
chr3 (4-36)||(10015792-10015824)
chr3 (1-33)||(10220938-10220970)
chr3 (1-33)||(12050392-12050424)
chr3 (1-33)||(14428615-14428647)
chr3 (4-36)||(15996776-15996808)
chr3 (1-33)||(16435236-16435268)
chr3 (4-36)||(19897839-19897871)
chr3 (1-33)||(21756491-21756523)
chr3 (1-33)||(22103929-22103961)
chr3 (1-33)||(25149122-25149154)
chr3 (1-33)||(26058551-26058583)
chr3 (1-33)||(26593765-26593797)
chr3 (4-36)||(28875254-28875286)
chr3 (1-33)||(35868083-35868115)
chr3 (1-33)||(37728718-37728750)
chr3 (4-36)||(42801523-42801555)
chr3 (1-33)||(43868108-43868140)
chr3 (1-33)||(44543787-44543819)
chr3 (1-33)||(45252778-45252810)
chr3 (4-36)||(45513640-45513672)
chr3 (1-33)||(46049986-46050018)
chr3 (1-33)||(46703032-46703064)
chr3 (1-33)||(47066939-47066971)
chr3 (1-33)||(51284062-51284094)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-36)||(5153-5188)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-36)||(10182-10217)
[»] scaffold0240 (2 HSPs)
scaffold0240 (1-36)||(18499-18534)
scaffold0240 (4-36)||(18759-18791)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-36)||(3440-3475)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-36)||(48656-48691)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-36)||(45674-45709)
[»] chr2 (30 HSPs)
chr2 (1-36)||(2060318-2060353)
chr2 (1-36)||(7116299-7116334)
chr2 (1-36)||(8782468-8782503)
chr2 (1-36)||(8912874-8912909)
chr2 (1-36)||(12360459-12360494)
chr2 (1-36)||(12872988-12873023)
chr2 (1-36)||(26322293-26322328)
chr2 (1-36)||(28566153-28566188)
chr2 (1-31)||(20727858-20727888)
chr2 (4-36)||(2200243-2200275)
chr2 (1-33)||(2438230-2438262)
chr2 (4-36)||(3095301-3095333)
chr2 (1-33)||(7491849-7491881)
chr2 (1-33)||(8716892-8716924)
chr2 (1-33)||(11201688-11201720)
chr2 (4-36)||(12890211-12890243)
chr2 (1-33)||(17408294-17408326)
chr2 (4-36)||(18374707-18374739)
chr2 (1-33)||(20252215-20252247)
chr2 (1-33)||(24300351-24300383)
chr2 (4-36)||(24345681-24345713)
chr2 (1-33)||(27560211-27560243)
chr2 (4-36)||(32712791-32712823)
chr2 (1-33)||(34062665-34062697)
chr2 (1-33)||(34883848-34883880)
chr2 (1-33)||(36131028-36131060)
chr2 (1-33)||(40607707-40607739)
chr2 (4-36)||(41422514-41422546)
chr2 (1-33)||(41450521-41450553)
chr2 (4-36)||(41494625-41494657)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-31)||(31687-31717)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-33)||(3782-3814)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-33)||(7140-7172)
[»] scaffold0163 (1 HSPs)
scaffold0163 (4-36)||(1449-1481)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-33)||(12070-12102)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-36)||(36366-36398)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-33)||(51682-51714)
[»] scaffold0020 (1 HSPs)
scaffold0020 (4-36)||(164216-164248)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-33)||(47645-47677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-33)||(259122-259154)


Alignment Details
Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 33359454 - 33359323
Alignment:
Q  120 gtcatcttactaaataatataatatcttcgaacactaattaaacccgatgtgaatttgcatattaaaattgcgtatgaaaataaattagaaaataaagtt 219  Q
    ||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33359454 gtcatctaactaaagaatataatatcttcgaaccctaattaaacccgacgtgaatttgcatatttaaattgcgtatgaaaataaattagaaaataaagtt 33359355  T
Q  220 gcatctatacctattaataaagacaatacttt 251  Q
    |||||||||||||||| |||||| ||||||||    
T  33359354 gcatctatacctattattaaagataatacttt 33359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 33373504 - 33373435
Alignment:
Q  154 ctaattaaacccgatgtgaatttgcatattaaaattgcgtatgaaaataaattagaaaataaagttgcat 223  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33373504 ctaactaaatccgatgtgaatttccatattaaaattgcgtatgaaaataaattagaaaataaagttgcat 33373435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 6089769 - 6089737
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||||||||||||    
T  6089769 tcaaaagggtcttataattagagacggaggtag 6089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14171579 - 14171547
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  14171579 ttctcaaaagggtcttataattagagacggagg 14171547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 48067898 - 48067930
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||||||||||||    
T  48067898 tcaaaagggtcttataattagagacggaggtag 48067930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7763749 - 7763784
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  7763749 ttctcaaaagggtcttataattagggacggaggtag 7763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 25509246 - 25509211
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  25509246 ttctcaaaagggtcttataattagggacggaggtag 25509211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 27037306 - 27037271
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  27037306 ttctcaaaagggtcttataattagggacggaggtag 27037271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 42276161 - 42276196
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  42276161 ttctcaaaagggtcttataattagggacggaggtag 42276196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 43456621 - 43456656
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  43456621 ttctcaaaagggtcttataattagggacggaggtag 43456656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 47296550 - 47296580
Alignment:
Q  6 aaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||||||||||    
T  47296550 aaaagggtcttataattagagacggaggtag 47296580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 943637 - 943669
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  943637 ttctcaaaagggtcttataattagggacggagg 943669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1039381 - 1039413
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  1039381 ttctcaaaagggtcttataattagggacggagg 1039413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1046287 - 1046319
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  1046287 ttctcaaaagggtcttataattagggacggagg 1046319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 3549066 - 3549034
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||| ||||||||||||||||||||||||    
T  3549066 tcaaaaggatcttataattagagacggaggtag 3549034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4102714 - 4102746
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4102714 ttctcaaaagggtcttataattagggacggagg 4102746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 4280129 - 4280161
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  4280129 tcaaaagggtcttataattagggacggaggtag 4280161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 9413328 - 9413360
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  9413328 tcaaaagggtcttataattagggacggaggtag 9413360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11741434 - 11741402
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11741434 ttctcaaaagggtcttataattagggacggagg 11741402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11907230 - 11907262
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||| ||||||||||||||||||||||||||||    
T  11907230 ttcttaaaagggtcttataattagagacggagg 11907262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13343810 - 13343778
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  13343810 ttctcaaaagggtcttataattagggacggagg 13343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15811232 - 15811264
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  15811232 ttctcaaaagggtcttataattagggacggagg 15811264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 17483767 - 17483735
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  17483767 tcaaaagggtcttataattagggacggaggtag 17483735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 21631110 - 21631142
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  21631110 tcaaaagggtcttataattagggacggaggtag 21631142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 22940595 - 22940563
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||| |||||||||||||||||||||    
T  22940595 tcaaaagggtcctataattagagacggaggtag 22940563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23542016 - 23541984
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  23542016 ttctcaaaagggtcttataattagggacggagg 23541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 25227338 - 25227306
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  25227338 tcaaaagggtcttataattagggacggaggtag 25227306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 27037533 - 27037565
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  27037533 tcaaaagggtcttataattagggacggaggtag 27037565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 28885876 - 28885844
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  28885876 tcaaaagggtcttataattagggacggaggtag 28885844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30289862 - 30289894
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30289862 ttctcaaaagggtcttataattagggacggagg 30289894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30290302 - 30290270
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30290302 ttctcaaaagggtcttataattagggacggagg 30290270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36694891 - 36694859
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36694891 ttctcaaaagggtcttataattagggacggagg 36694859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36710992 - 36710960
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36710992 ttctcaaaagggtcttataattagggacggagg 36710960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37951949 - 37951981
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  37951949 ttctcaaaagggtcttataattagggacggagg 37951981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 38613739 - 38613771
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  38613739 tcaaaagggtcttataattagggacggaggtag 38613771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39363194 - 39363226
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39363194 ttctcaaaagggtcttataattagggacggagg 39363226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39497470 - 39497438
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39497470 ttctcaaaagggtcttataattagggacggagg 39497438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 41317627 - 41317595
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  41317627 tcaaaagggtcttataattagggacggaggtag 41317595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44649666 - 44649634
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  44649666 ttctcaaaagggtcttataattagggacggagg 44649634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45039449 - 45039417
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  45039449 ttctcaaaagggtcttataattagggacggagg 45039417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46075867 - 46075899
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  46075867 ttctcaaaagggtcttataattagggacggagg 46075899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 49907058 - 49907026
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  49907058 ttctcaaaagggtcttataattagggacggagg 49907026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52431174 - 52431206
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  52431174 ttctcaaaagggtcttataattagggacggagg 52431206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 29701423 - 29701330
Alignment:
Q  129 ctaaataatataatatcttcgaacactaattaaacccgatgtgaatttgcatattaaaattgcgtatgaaaataaattagaaaataaagttgcat 223  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||| ||||||    
T  29701423 ctaaataatataatgtcttcgaacactaattaaacccgacgtgaatttgcatattaaaattgcgtat-taaataaattaaaaaataaaattgcat 29701330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 49045123 - 49045155
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||||||||||||    
T  49045123 tcaaaagggtcttataattagagacggaggtag 49045155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 2290016 - 2290051
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  2290016 ttctcaaaagggtcttataattagggacggaggtag 2290051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34012517 - 34012552
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34012517 ttctcaaaagggtcttataattagggacggaggtag 34012552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 41444239 - 41444204
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41444239 ttctcaaaagggtcttataattagagacgaaggtag 41444204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31769332 - 31769366
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggta 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  31769332 ttctcaaaagggtcttataattagggacggaggta 31769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 33381574 - 33381608
Alignment:
Q  2 tctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||| |||||||||||    
T  33381574 tctcaaaagggtcttataattagggacggaggtag 33381608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 18113169 - 18113198
Alignment:
Q  4 tcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||||||||||||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagg 18113198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6387362 - 6387330
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||| ||||||||||||||||||||||    
T  6387362 ttctcaaaagagtcttataattagagacggagg 6387330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19920600 - 19920568
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  19920600 ttctcaaaagggtcttataattagggacggagg 19920568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21295188 - 21295156
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  21295188 ttctcaaaagggtcttataattagggacggagg 21295156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26255133 - 26255101
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  26255133 ttctcaaaagggtcttataattagggacggagg 26255101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 27813530 - 27813498
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  27813530 tcaaaagggtcttataattagggacggaggtag 27813498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 29177025 - 29176997
Alignment:
Q  5 caaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||    
T  29177025 caaaagggtcttataattagagacggagg 29176997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29286037 - 29286069
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  29286037 ttctcaaaagggtcttataattagggacggagg 29286069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29643143 - 29643175
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||||||||||||||||||| |||||    
T  29643143 ttctcaaaagggtcttataattagagatggagg 29643175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31458034 - 31458002
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  31458034 ttctcaaaagggtcttataattagggacggagg 31458002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 31581711 - 31581679
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  31581711 tcaaaagggtcttataattagggacggaggtag 31581679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 32118166 - 32118198
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  32118166 tcaaaagggtcttataattagggacggaggtag 32118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32814470 - 32814438
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32814470 ttctcaaaagggtcttataattagggacggagg 32814438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32872375 - 32872407
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32872375 ttctcaaaagggtcttataattagggacggagg 32872407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33858866 - 33858898
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  33858866 ttctcaaaagggtcttataattagggacggagg 33858898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36698131 - 36698163
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36698131 ttctcaaaagggtcttataattagggacggagg 36698163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38858335 - 38858303
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  38858335 ttctcaaaagggtcttataattagggacggagg 38858303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39197755 - 39197723
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39197755 ttctcaaaagggtcttataattagggacggagg 39197723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39871613 - 39871645
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39871613 ttctcaaaagggtcttataattagggacggagg 39871645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41026096 - 41026128
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41026096 ttctcaaaagggtcttataattagggacggagg 41026128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41252361 - 41252393
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41252361 ttctcaaaagggtcttataattagggacggagg 41252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48521066 - 48521034
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  48521066 ttctcaaaagggtcttataattagggacggagg 48521034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 36311077 - 36311124
Alignment:
Q  130 taaataatataatatcttcgaacactaattaaacccgatgtgaatttg 177  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||    
T  36311077 taaataatataatgtcttcgaacactaattaaacccaacgtgaatttg 36311124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3028050 - 3028015
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3028050 ttctcaaaagggtcttataattagggacggaggtag 3028015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8949849 - 8949814
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  8949849 ttctcaaaagggtcttataattagggacggaggtag 8949814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 20988213 - 20988248
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  20988213 ttctcaaaagggtcttataattggagacggaggtag 20988248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23092640 - 23092675
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23092640 ttctcaaaagggtcttatagttagagacggaggtag 23092675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23260138 - 23260173
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  23260138 ttctcaaaagggtcttataattagggacggaggtag 23260173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23286474 - 23286509
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  23286474 ttctcaaaagggtcttataattagggacggaggtag 23286509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 43060411 - 43060446
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  43060411 ttctcaaaagggtcttataattagggacggaggtag 43060446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 19571940 - 19571974
Alignment:
Q  2 tctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||| |||||||||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtag 19571974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20987785 - 20987751
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggta 35  Q
    ||||||| |||||||||||||||||||||||||||    
T  20987785 ttctcaagagggtcttataattagagacggaggta 20987751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 4902843 - 4902810
Alignment:
Q  2 tctcaaaagggtcttataattagagacggaggta 35  Q
    |||||||| |||||||||||||||||||||||||    
T  4902843 tctcaaaatggtcttataattagagacggaggta 4902810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1265986 - 1265954
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  1265986 ttctcaaaagggtcttataattagggacggagg 1265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 4976293 - 4976325
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  4976293 tcaaaagggtcttataattagggacggaggtag 4976325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6673228 - 6673260
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  6673228 ttctcaaaagggtcttataattagggacggagg 6673260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 7734867 - 7734835
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||| ||||||||||||||||||||||||    
T  7734867 tcaaaaggatcttataattagagacggaggtag 7734835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 7940486 - 7940454
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  7940486 tcaaaagggtcttataattagggacggaggtag 7940454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9828430 - 9828398
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  9828430 ttctcaaaagggtcttataattagggacggagg 9828398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13660898 - 13660866
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  13660898 ttctcaaaaggatcttataattagagacggagg 13660866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 14435864 - 14435832
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  14435864 tcaaaagggtcttataattagggacggaggtag 14435832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14913685 - 14913653
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14913685 ttctcaaaagggtcttataattagggacggagg 14913653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16127296 - 16127264
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  16127296 ttctcaaaagggtcttataattagggacggagg 16127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22527729 - 22527697
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  22527729 ttctcaaaagggtcttataattagggacggagg 22527697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26894873 - 26894905
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  26894873 ttctcaaaagggtcttataattagggacggagg 26894905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 32147555 - 32147583
Alignment:
Q  5 caaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||    
T  32147555 caaaagggtcttataattagagacggagg 32147583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 38371978 - 38372010
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||||||| ||||    
T  38371978 tcaaaagggtcttataattagagacggatgtag 38372010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40004409 - 40004441
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  40004409 ttctcaaaagggtcttataattagggacggagg 40004441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17339115 - 17339080
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  17339115 ttctcaaaagggtcttataattagagacggaggtag 17339080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 41191628 - 41191663
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  41191628 ttctcaaaagggtcttataattagagacggaggtag 41191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 50424854 - 50424886
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  50424854 ttctcaaaagggtcttataattagagacggagg 50424886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52870681 - 52870649
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  52870681 ttctcaaaagggtcttataattagagacggagg 52870649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 422928 - 422959
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggag 32  Q
    ||||||||||||||||||||||||||||||||    
T  422928 ttctcaaaagggtcttataattagagacggag 422959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 4416002 - 4415967
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  4416002 ttctcaaaagggtcttataattagggacggaggtag 4415967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 14794022 - 14794057
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  14794022 ttcttaaaagggtcttataattagagacggaggtag 14794057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 20455181 - 20455216
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  20455181 ttctcaaaagggtcttataattagggacggaggtag 20455216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 25124246 - 25124281
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  25124246 ttctcaaaagggtcttataattagggacggaggtag 25124281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28501386 - 28501421
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  28501386 ttctcaaaagggtcttataattagggacggaggtag 28501421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 29520164 - 29520199
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  29520164 ttctcaaaagggtcttataattagggacggaggtag 29520199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 31937113 - 31937078
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  31937113 ttctcaaaagggtcttataattagggacggaggtag 31937078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 36990951 - 36990916
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||| ||||||||||||||||||||||||||    
T  36990951 ttctcaaaaaggtcttataattagagacggaggtag 36990916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 46950029 - 46949994
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  46950029 ttctcaaaagggtcttataattagggacggaggtag 46949994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 49373693 - 49373728
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  49373693 ttctcaaaagggtcttataattagggacggaggtag 49373728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 49793128 - 49793093
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  49793128 ttctcaaaagggtcttataattagggacggaggtag 49793093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 53564356 - 53564391
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  53564356 ttctcaaaagggtcttataattagggacggaggtag 53564391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 56432555 - 56432520
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  56432555 ttctcaaaagggtcttataattagggacggaggtag 56432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 32899219 - 32899253
Alignment:
Q  2 tctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||| |||||||||||    
T  32899219 tctcaaaagggtcttataattagggacggaggtag 32899253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 41620551 - 41620517
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggta 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  41620551 ttctcaaaagggtcttataattagggacggaggta 41620517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 55563128 - 55563162
Alignment:
Q  2 tctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||| |||||||||||    
T  55563128 tctcaaaagggtcttataattagggacggaggtag 55563162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 581742 - 581771
Alignment:
Q  222 atctatacctattaataaagacaatacttt 251  Q
    ||||||||||||||||||||||||||||||    
T  581742 atctatacctattaataaagacaatacttt 581771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 49228721 - 49228750
Alignment:
Q  4 tcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||||||||||||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagg 49228750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4035862 - 4035830
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4035862 ttctcaaaagggtcttataattagggacggagg 4035830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5375557 - 5375589
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  5375557 ttctcaaaagggtcttataattagggacggagg 5375589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5743659 - 5743691
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  5743659 ttctcaaaagggtcttataattagggacggagg 5743691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 7698472 - 7698504
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  7698472 tcaaaagggtcttataattagggacggaggtag 7698504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9328240 - 9328272
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  9328240 ttctcaaaagggtcttataattagggacggagg 9328272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 18872751 - 18872719
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  18872751 tcaaaagggtcttataattagggacggaggtag 18872719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30771565 - 30771533
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30771565 ttctcaaaagggtcttataattagggacggagg 30771533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32032993 - 32033025
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32032993 ttctcaaaagggtcttataattagggacggagg 32033025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33413555 - 33413523
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  33413555 ttctcaaaagggtcttataattagggacggagg 33413523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34273219 - 34273251
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34273219 ttctcaaaagggtcttataattagggacggagg 34273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 39670989 - 39671021
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  39670989 tcaaaagggtcttataattagggacggaggtag 39671021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43387993 - 43388025
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  43387993 ttctcaaaagggtcttataattagggacggagg 43388025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44294826 - 44294794
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  44294826 ttctcaaaagggtcttataattagggacggagg 44294794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45742806 - 45742838
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  45742806 ttctcaaaagggtcttataattagggacggagg 45742838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47228728 - 47228760
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  47228728 ttctcaaaagggtcttataattagggacggagg 47228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 47806897 - 47806865
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  47806897 ttctcaaaagggtcttataattagggacggagg 47806865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 50352101 - 50352069
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  50352101 ttctcaaaaggatcttataattagagacggagg 50352069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52978019 - 52977987
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  52978019 ttctcaaaagggtcttataattagggacggagg 52977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55632259 - 55632291
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  55632259 ttctcaaaaggatcttataattagagacggagg 55632291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29598261 - 29598229
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  29598261 ttctcaaaagggtcttataattagagacggagg 29598229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38878758 - 38878726
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  38878758 ttctcaaaagggtcttataattagagacggagg 38878726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 2152240 - 2152275
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  2152240 ttctcaaaagggtcttataattagggacggaggtag 2152275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5162341 - 5162306
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  5162341 ttctcaaaagggtcttataattagggacggaggtag 5162306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 12802648 - 12802613
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  12802648 ttctcaaaagggtcttataattagggacggaggtag 12802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 17069844 - 17069879
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  17069844 ttctcaaaagggtcttataattagggacggaggtag 17069879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17578429 - 17578394
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  17578429 ttctcaaaagggtcttataattagggacggaggtag 17578394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 18641380 - 18641415
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  18641380 ttctcaaaagggtcttataattagggacggaggtag 18641415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30140159 - 30140124
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30140159 ttctcaaaagggtcttataattatagacggaggtag 30140124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 6050557 - 6050590
Alignment:
Q  3 ctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||| |||||||||||    
T  6050557 ctcaaaagggtcttataattagggacggaggtag 6050590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51095 - 51127
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  51095 ttctcaaaagggtcttataattagggacggagg 51127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1774379 - 1774347
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  1774379 ttctcaaaagggtcttataattagggacggagg 1774347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2944272 - 2944304
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  2944272 ttctcaaaagggtcttataattagggacggagg 2944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8251933 - 8251965
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  8251933 ttctcaaaagggtcttataattagggacggagg 8251965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8951428 - 8951460
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  8951428 ttctcaaaagggtcttataattagggacggagg 8951460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 12504149 - 12504185
Alignment:
Q  129 ctaaataatataatatcttcgaacactaattaaaccc 165  Q
    |||||||||||||| |||||||| |||||||||||||    
T  12504149 ctaaataatataatgtcttcgaagactaattaaaccc 12504185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13153965 - 13153933
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  13153965 ttctcaaaagggtcttataattagggacggagg 13153933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18754181 - 18754149
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  18754181 ttctcaaaagggtcttataattagggacggagg 18754149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 23487098 - 23487066
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  23487098 tcaaaagggtcttataattagggacggaggtag 23487066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 23688168 - 23688200
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  23688168 tcaaaagggtcttataattagggacggaggtag 23688200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28192175 - 28192207
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28192175 ttctcaaaagggtcttataattagggacggagg 28192207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28572083 - 28572051
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28572083 ttctcaaaagggtcttataattagggacggagg 28572051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28579676 - 28579644
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28579676 ttctcaaaagggtcttataattagggacggagg 28579644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 32522846 - 32522878
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  32522846 tcaaaagggtcttataattagcgacggaggtag 32522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32675757 - 32675789
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32675757 ttctcaaaagggtcttataattagggacggagg 32675789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34568527 - 34568495
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34568527 ttctcaaaagggtcttataattagggacggagg 34568495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39029215 - 39029183
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39029215 ttctcaaaagggtcttataattagggacggagg 39029183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 44888714 - 44888682
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  44888714 tcaaaagggtcttataattagggacggaggtag 44888682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10195993 - 10196025
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  10195993 ttctcaaaagggtcttataattagagacggagg 10196025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19097801 - 19097833
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  19097801 ttctcaaaagggtcttataattagagacggagg 19097833  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 402621 - 402656
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  402621 ttctcaaaagggtcttataattagggacggaggtag 402656  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2090695 - 2090660
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  2090695 ttctcaaaagggtcttataattagggacggaggtag 2090660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13901678 - 13901643
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  13901678 ttctcaaaagggtcttataattagggacggaggtag 13901643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15498666 - 15498631
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  15498666 ttctcaaaagggtcttataattagggacggaggtag 15498631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 23604497 - 23604462
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  23604497 ttctcaaaagggtcttataattagggacggaggtag 23604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 25045643 - 25045678
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  25045643 ttctcaaaagggtcttataattagggacggaggtag 25045678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34915543 - 34915578
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34915543 ttctcaaaagggtcttataattagggacggaggtag 34915578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17227527 - 17227561
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggta 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  17227527 ttctcaaaagggtcttataattagggacggaggta 17227561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17175464 - 17175493
Alignment:
Q  1 ttctcaaaagggtcttataattagagacgg 30  Q
    ||||||||||||||||||||||||||||||    
T  17175464 ttctcaaaagggtcttataattagagacgg 17175493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 23158117 - 23158146
Alignment:
Q  222 atctatacctattaataaagacaatacttt 251  Q
    ||||||||||||||||||||||||||||||    
T  23158117 atctatacctattaataaagacaatacttt 23158146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 231105 - 231137
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  231105 ttctcaaaagggtcttataattagggacggagg 231137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 4175276 - 4175244
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||||||| ||||    
T  4175276 tcaaaagggtcttataattagagacggatgtag 4175244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4844437 - 4844405
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4844437 ttctcaaaagggtcttataattagggacggagg 4844405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 7367872 - 7367904
Alignment:
Q  219 tgcatctatacctattaataaagacaatacttt 251  Q
    ||||||||||||||||||||||| |||||||||    
T  7367872 tgcatctatacctattaataaaggcaatacttt 7367904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8743225 - 8743193
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  8743225 ttctcaaaagggtcttataattagggacggagg 8743193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 13321329 - 13321361
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  13321329 tcaaaagggtcttataattagggacggaggtag 13321361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 16122517 - 16122549
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  16122517 tcaaaagggtcttataattagggacggaggtag 16122549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 22710300 - 22710268
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||| |||||||||||||||||||||||||    
T  22710300 tcaaaagtgtcttataattagagacggaggtag 22710268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 28236204 - 28236236
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||| |||||||||||||||||||||||||    
T  28236204 tcaaaagtgtcttataattagagacggaggtag 28236236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30248684 - 30248652
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30248684 ttctcaaaagggtcttataattagggacggagg 30248652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 31091479 - 31091447
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  31091479 tcaaaagggtcttataattagggacggaggtag 31091447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34301832 - 34301864
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34301832 ttctcaaaagggtcttataattagggacggagg 34301864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 50647944 - 50647976
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||||||||||||    
T  50647944 ttctcaaaagggtcttataattagagacggagg 50647976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 4759351 - 4759386
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  4759351 ttctcaaaagggtcttataattagggacggaggtag 4759386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8321962 - 8321927
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  8321962 ttctcaaaagggtcttataattagggacggaggtag 8321927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 20918256 - 20918221
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  20918256 ttctcaaaagggtcttataattagggacggaggtag 20918221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 20927218 - 20927183
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  20927218 ttctcaaaagggtcttataattagggacggaggtag 20927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 24087335 - 24087370
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  24087335 ttctcaaaagggtcttataattagggacggaggtag 24087370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 41392880 - 41392915
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  41392880 ttctcaaaagggtcttataattagggacggaggtag 41392915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 46845492 - 46845527
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  46845492 ttctcaaaagggtcttataattagggacggaggtag 46845527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 49383833 - 49383868
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  49383833 ttctcaaaagagtcttataattagagacggaggtag 49383868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 23217930 - 23217959
Alignment:
Q  222 atctatacctattaataaagacaatacttt 251  Q
    ||||||||||||||||||||||||||||||    
T  23217930 atctatacctattaataaagacaatacttt 23217959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 44542474 - 44542507
Alignment:
Q  2 tctcaaaagggtcttataattagagacggaggta 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  44542474 tctcaaaagggtcttataattagggacggaggta 44542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 4759122 - 4759090
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  4759122 tcaaaagggtcttataattagggacggaggtag 4759090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7181387 - 7181355
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7181387 ttctcaaaagggtcttataattagggacggagg 7181355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7462997 - 7463029
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  7462997 ttctcaaaaggatcttataattagagacggagg 7463029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9499497 - 9499529
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  9499497 ttctcaaaagggtcttataattagggacggagg 9499529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 10015792 - 10015824
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  10015792 tcaaaagggtcttataattagggacggaggtag 10015824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10220970 - 10220938
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  10220970 ttctcaaaagggtcttataattagggacggagg 10220938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12050392 - 12050424
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  12050392 ttctcaaaagggtcttataattagggacggagg 12050424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14428647 - 14428615
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14428647 ttctcaaaagggtcttataattagggacggagg 14428615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 15996776 - 15996808
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  15996776 tcaaaagggtcttataattagggacggaggtag 15996808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16435236 - 16435268
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  16435236 ttctcaaaaggatcttataattagagacggagg 16435268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 19897839 - 19897871
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  19897839 tcaaaagggtcttataattagggacggaggtag 19897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21756523 - 21756491
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  21756523 ttctcaaaagggtcttataattagggacggagg 21756491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22103929 - 22103961
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  22103929 ttctcaaaagggtcttataattagggacggagg 22103961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25149122 - 25149154
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  25149122 ttctcaaaagggtcttataattagggacggagg 25149154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26058583 - 26058551
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  26058583 ttctcaaaagggtcttataattagggacggagg 26058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26593765 - 26593797
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  26593765 ttctcaaaagggtcttataattagggacggagg 26593797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 28875254 - 28875286
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  28875254 tcaaaagggtcttataattagggacggaggtag 28875286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35868083 - 35868115
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  35868083 ttctcaaaagggtcttataattagggacggagg 35868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37728750 - 37728718
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  37728750 ttctcaaaagggtcttataattagggacggagg 37728718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 42801555 - 42801523
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  42801555 tcaaaagggtcttataattagggacggaggtag 42801523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43868140 - 43868108
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  43868140 ttctcaaaagggtcttataattagggacggagg 43868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44543819 - 44543787
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  44543819 ttctcaaaagggtcttataattagggacggagg 44543787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45252810 - 45252778
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  45252810 ttctcaaaagggtcttataattagggacggagg 45252778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 45513640 - 45513672
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  45513640 tcaaaagggtcttataattagggacggaggtag 45513672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46049986 - 46050018
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  46049986 ttctcaaaagggtcttataattagggacggagg 46050018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46703064 - 46703032
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  46703064 ttctcaaaagggtcttataattagggacggagg 46703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 47066971 - 47066939
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  47066971 ttctcaaaagggtcttataattagggacggagg 47066939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51284062 - 51284094
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  51284062 ttctcaaaagggtcttataattagggacggagg 51284094  T

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Target: scaffold0674 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5188 - 5153
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  5188 ttctcaaaagggtcttataattagggacggaggtag 5153  T

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Target: scaffold0549 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10182 - 10217
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  10182 ttctcaaaagggtcttataattagggacggaggtag 10217  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 18534 - 18499
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  18534 ttctcaaaagggtcttataattagggacggaggtag 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 18759 - 18791
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  18759 tcaaaagggtcttataattagggacggaggtag 18791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3475 - 3440
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3475 ttctcaaaagggtcttataattagggacggaggtag 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 48691 - 48656
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  48691 ttctcaaaagggtcttataattagggacggaggtag 48656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 45709 - 45674
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  45709 ttcttaaaagggtcttataattagagacggaggtag 45674  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2060353 - 2060318
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  2060353 ttctcaaaagggtcttataattagggacggaggtag 2060318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7116299 - 7116334
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  7116299 ttctcaaaagggtcttataattagggacggaggtag 7116334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8782503 - 8782468
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8782503 ttctcaaaaggttcttataattagagacggaggtag 8782468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 8912874 - 8912909
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  8912874 ttctcaaaagggtcttataattagggacggaggtag 8912909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 12360494 - 12360459
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12360494 ttctcaaaagggtcttataattaaagacggaggtag 12360459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 12873023 - 12872988
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  12873023 ttcttaaaagggtcttataattagagacggaggtag 12872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26322293 - 26322328
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  26322293 ttctcaaaagggtcttataattagggacggaggtag 26322328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 28566188 - 28566153
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggaggtag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  28566188 ttctcaaaagggtcttataattagggacggaggtag 28566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 20727858 - 20727888
Alignment:
Q  1 ttctcaaaagggtcttataattagagacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  20727858 ttctcaaaagggtcttataattagagacgga 20727888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 2200243 - 2200275
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  2200243 tcaaaagggtcttataattagggacggaggtag 2200275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2438262 - 2438230
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  2438262 ttctcaaaagggtcttataattagggacggagg 2438230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 3095333 - 3095301
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  3095333 tcaaaagggtcttataattagggacggaggtag 3095301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7491881 - 7491849
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7491881 ttctcaaaagggtcttataattagggacggagg 7491849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8716892 - 8716924
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  8716892 ttctcaaaagggtcttataattagggacggagg 8716924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11201720 - 11201688
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11201720 ttctcaaaagggtcttataattagggacggagg 11201688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 12890211 - 12890243
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  12890211 tcaaaagggtcttataattagggacggaggtag 12890243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17408294 - 17408326
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  17408294 ttctcaaaagggtcttataattagggacggagg 17408326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 18374707 - 18374739
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  18374707 tcaaaagggtcttataattagggacggaggtag 18374739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20252247 - 20252215
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  20252247 ttctcaaaagggtcttataattagggacggagg 20252215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24300351 - 24300383
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    ||||||||||||||||||||||||| |||||||    
T  24300351 ttctcaaaagggtcttataattagaaacggagg 24300383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 24345681 - 24345713
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  24345681 tcaaaagggtcttataattagggacggaggtag 24345713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27560243 - 27560211
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  27560243 ttctcaaaagggtcttataattagggacggagg 27560211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 32712791 - 32712823
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    |||||| ||||||||||||||||||||||||||    
T  32712791 tcaaaaaggtcttataattagagacggaggtag 32712823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34062665 - 34062697
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34062665 ttctcaaaagggtcttataattagggacggagg 34062697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34883848 - 34883880
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34883848 ttctcaaaagggtcttataattagggacggagg 34883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36131028 - 36131060
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36131028 ttctcaaaagggtcttataattagggacggagg 36131060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40607739 - 40607707
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  40607739 ttctcaaaagggtcttataattagggacggagg 40607707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 41422546 - 41422514
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  41422546 tcaaaagggtcttataattagggacggaggtag 41422514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41450553 - 41450521
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41450553 ttctcaaaagggtcttataattagggacggagg 41450521  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 41494625 - 41494657
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  41494625 tcaaaagggtcttataattagggacggaggtag 41494657  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31687 - 31717
Alignment:
Q  1 ttctcaaaagggtcttataattagagacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  31687 ttctcaaaagggtcttataattagagacgga 31717  T

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Target: scaffold0604 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3782 - 3814
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  3782 ttctcaaaagggtcttataattagggacggagg 3814  T

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Target: scaffold0339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7140 - 7172
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7140 ttctcaaaagggtcttataattagggacggagg 7172  T

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Target: scaffold0163 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 1449 - 1481
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  1449 tcaaaagggtcttataattagggacggaggtag 1481  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12102 - 12070
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  12102 ttctcaaaagggtcttataattagggacggagg 12070  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 36366 - 36398
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||| |||||||||||||||||||||||||    
T  36366 tcaaaagtgtcttataattagagacggaggtag 36398  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51682 - 51714
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  51682 ttctcaaaagggtcttataattagggacggagg 51714  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 164248 - 164216
Alignment:
Q  4 tcaaaagggtcttataattagagacggaggtag 36  Q
    ||||||||||||||||||||| |||||||||||    
T  164248 tcaaaagggtcttataattagggacggaggtag 164216  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 47677 - 47645
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  47677 ttctcaaaagggtcttataattagggacggagg 47645  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 259122 - 259154
Alignment:
Q  1 ttctcaaaagggtcttataattagagacggagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  259122 ttctcaaaagggtcttataattagggacggagg 259154  T

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