View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12721_high_26 (Length: 249)
Name: NF12721_high_26
Description: NF12721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12721_high_26 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 1329221 - 1328991
Alignment:
| Q |
19 |
gttgcattgaaacagatagccatgagaatgctttgtatacatgtgtaatgtaatgtgaatatatcatatggtatgcatacttagatatatttgattgcaa |
118 |
Q |
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| T |
1329221 |
gttgcattgaaacagatagccatgagaatgctttgtatacatgtgtaatgtaatgtgaatatatcatatggtatgcatacttagatatatttgattgcaa |
1329122 |
T |
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| Q |
119 |
aaaggtgtttgataagaaaaaactagataaaatctaataatatataaagcaaattgaatggaaggataagtattttgttatgcaaaatgtatggtctaat |
218 |
Q |
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| T |
1329121 |
aaaggtgtttgataagaaaaaactagataaaatctaataatatataaagcaaattgaatggaaggataagtattttgttatgcaaaatgtatggtctaat |
1329022 |
T |
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| Q |
219 |
gatcacaaacctgtggggcgacaagctaaaa |
249 |
Q |
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| T |
1329021 |
gatcacaaacctgtggggcgacaagctaaaa |
1328991 |
T |
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