View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12721_low_13 (Length: 347)
Name: NF12721_low_13
Description: NF12721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12721_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 41010455 - 41010152
Alignment:
| Q |
1 |
caagctcagcatagttaggcaaatcctatgtatactatacctaactaataaatgttcttttgtagaaacaaactcttctttgtcgtgacaaaccatgcat |
100 |
Q |
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| T |
41010455 |
caagctcagcatagttaggcaaaacctatgtatactatacctaactaataaatgttcttttgtagaaataaactcttctttgtcgtgacaaaccatgcat |
41010356 |
T |
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| Q |
101 |
gcactctacggtttgttttgtctgaaaagtttaatacaaataactgccctgctataataagtttgagaacgttgttcctttctggagttaatttattaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41010355 |
gcactctacggtttgttttgtctgaaaagtttaatacaaataactgccctgctataataagtttgagaacgttgttcctttctggagttaatttattaat |
41010256 |
T |
|
| Q |
201 |
aggtaaagggaagcatcaagtggaaaagctagaaaaataatttcgttcatagttttagatcaaaatctagttctagttaatttattaataggtcatcttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41010255 |
aggtaaagggaagcatcaagtggaaaagctagaaaaataatttcgttcatagttttagatcaaaatctagttctagttaatttattaataggtcatcttg |
41010156 |
T |
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| Q |
301 |
caac |
304 |
Q |
| |
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|||| |
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| T |
41010155 |
caac |
41010152 |
T |
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