View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12721_low_14 (Length: 328)
Name: NF12721_low_14
Description: NF12721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12721_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 47117507 - 47117816
Alignment:
| Q |
1 |
tggtaagcttcatgcgagttgaatttactactaatcacattattttgaaaattagtatgaaattttgaaacatctaatttttgtgttgtttctatcagtc |
100 |
Q |
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| T |
47117507 |
tggtaagcttcatgcgagttgaatttactactaatcacattattttgaaaattagtatgaaattttgaaacatctaatttttgtgttgtttctattagtc |
47117606 |
T |
|
| Q |
101 |
aattcgctccactcaggaacaacctctatctgcaagatcacggtcaccaatggtataattggcttcagtaaatagaaccgcttaaattttagatcatagt |
200 |
Q |
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| T |
47117607 |
aattcgctctactcaggaacaacctctatctgcaagatcacggtcaccaatggtataattggcttcagtaaatagaaccgcttaaattttagatcatagt |
47117706 |
T |
|
| Q |
201 |
tttttgtttggaaatttgaaacttgtggtttgttgttttattagaaatttcgctctgctcaagaacaacctcaatctgcaagacctcgttcccccgcacc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117707 |
tttttgtttggaaatttgaaacttgtggtttgttgttttattagaaatttcgctctgctcaagaacaacctcaatctgcaagacctcgttcccccgcacc |
47117806 |
T |
|
| Q |
301 |
agtggtaatt |
310 |
Q |
| |
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|||||||||| |
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| T |
47117807 |
agtggtaatt |
47117816 |
T |
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