View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12722_low_15 (Length: 268)

Name: NF12722_low_15
Description: NF12722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12722_low_15
NF12722_low_15
[»] chr4 (6 HSPs)
chr4 (5-263)||(53402530-53402788)
chr4 (5-119)||(4826211-4826330)
chr4 (1-89)||(43543262-43543350)
chr4 (5-119)||(35043067-35043180)
chr4 (36-114)||(13119487-13119565)
chr4 (31-89)||(53618856-53618914)
[»] chr3 (6 HSPs)
chr3 (5-93)||(5528339-5528427)
chr3 (23-96)||(35314084-35314157)
chr3 (5-92)||(27158312-27158399)
chr3 (36-119)||(10896174-10896257)
chr3 (5-95)||(25410372-25410461)
chr3 (127-179)||(8868639-8868691)
[»] chr2 (7 HSPs)
chr2 (21-112)||(40800179-40800270)
chr2 (5-96)||(17560803-17560895)
chr2 (26-111)||(31013610-31013695)
chr2 (5-96)||(15970626-15970715)
chr2 (1-96)||(16907928-16908025)
chr2 (5-79)||(41501050-41501124)
chr2 (5-80)||(41969395-41969470)
[»] chr6 (4 HSPs)
chr6 (21-119)||(30655819-30655917)
chr6 (5-94)||(11714212-11714301)
chr6 (21-80)||(33189518-33189577)
chr6 (4-92)||(7810115-7810201)
[»] chr1 (4 HSPs)
chr1 (5-79)||(39003194-39003268)
chr1 (15-79)||(1485427-1485491)
chr1 (32-96)||(5696788-5696852)
chr1 (21-112)||(6087552-6087643)
[»] scaffold0606 (1 HSPs)
scaffold0606 (21-85)||(1963-2026)
[»] chr7 (3 HSPs)
chr7 (5-113)||(26562957-26563065)
chr7 (5-85)||(34889960-34890040)
chr7 (5-77)||(12163666-12163738)
[»] chr5 (1 HSPs)
chr5 (21-83)||(42204988-42205050)
[»] chr8 (1 HSPs)
chr8 (15-79)||(30678426-30678490)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 5 - 263
Target Start/End: Original strand, 53402530 - 53402788
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttcc 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  53402530 aaatgaggatgaatgtgtaaaagtgtgtgggaaatgaatcgtaccttgagggtgacgcgaaatcacccttatataggagaatgaggcgctaacgtcttcc 53402629  T
Q  105 gtgaaatgcggcgccacacaagggtttggggtccacatgtcttcatgggattgatgttctagccggtccaaaacaagattaaatcaattggaatttgtag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  53402630 gtgaaatgcggcgccacacaagggtttggggtccacatgtcttcatgggattgacgttctagccggttcagaacaagattaaatcaattggaatttgtag 53402729  T
Q  205 agttttaatatctagtttgaataatctttggtctaattttacttagctcgagatctgtg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53402730 agttttaatatctagtttgaataatctttggtctaattttacttagctcgagatttgtg 53402788  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 4826211 - 4826330
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcgg-----aatcacccttatataggagaatgaggcgctaaagt 99  Q
    |||||||  ||| ||||||||||||||||||||||||||||||| || ||| ||||||||     |||| | || ||||||||||| |||||||||| |     
T  4826211 aaatgagattgagtgggtaaaagtgtgtgggaaatgaatcgtactttgaggatgacgcggaatataatctctctaatataggagaaggaggcgctaacga 4826310  T
Q  100 tttccgtgaaatgcggcgcc 119  Q
     ||||||||||||| |||||    
T  4826311 cttccgtgaaatgcagcgcc 4826330  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43543350 - 43543262
Alignment:
Q  1 tagaaaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgag 89  Q
    |||||||||||| || ||| |||| |||||||||||||||||| ||| ||| ||||||||||  | ||| ||||||||| |||||||||    
T  43543350 tagaaaatgaggttgtatgcgtaagagtgtgtgggaaatgaattgtatcttgagggtgacgcaaagtcatccttatataagagaatgag 43543262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 35043180 - 35043067
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttcc 104  Q
    |||||||| |||||| |||||  ||| | ||||||||||||||| || ||||||||||||| ||||| ||||||||  ||| ||||||||||    ||||    
T  35043180 aaatgaggttgaatgtgtaaatatgt-tcggaaatgaatcgtacattgagggtgacgcggagtcaccattatatagaggaaggaggcgctaactacttcc 35043082  T
Q  105 gtgaaatgcggcgcc 119  Q
    ||| |||||||||||    
T  35043081 gtgtaatgcggcgcc 35043067  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 13119487 - 13119565
Alignment:
Q  36 aaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttccgtgaaatgcg 114  Q
    |||||||||||||||| || ||||||  || ||||||||||||||| ||| |||||| ||| |  |||||| |||||||    
T  13119487 aaatgaatcgtaccttgagagtgacgttgagtcacccttatataggtgaaggaggcgttaacggcttccgtaaaatgcg 13119565  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 53618856 - 53618914
Alignment:
Q  31 gtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgag 89  Q
    |||| |||||||||||||||| ||||||||| ||| ||||| |||||||  ||||||||    
T  53618856 gtggaaaatgaatcgtaccttgagggtgacgtggagtcaccattatataaaagaatgag 53618914  T

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Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 5528427 - 5528339
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgc 93  Q
    |||||||| |||||| ||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||||    
T  5528427 aaatgaggttgaatgtgtaaaagtgtgtgagaaataaatcgtaccttgagggtgacgcagaatcacccttatataggagaaggaggcgc 5528339  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 35314157 - 35314084
Alignment:
Q  23 aaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaa 96  Q
    |||| |||||||||||||||||||||||| ||||||||||  | || |||||||||||  ||||||||||||||    
T  35314157 aaaaatgtgtgggaaatgaatcgtaccttgagggtgacgctaagtctcccttatatagaggaatgaggcgctaa 35314084  T

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Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 27158312 - 27158399
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcg 92  Q
    |||| ||| |||||| ||||||||||||||||||||||| ||||||| |||||||||  ||||||| ||| ||||  |||| ||||||    
T  27158312 aaataaggttgaatgtgtaaaagtgtgtgggaaatgaattgtaccttgagggtgacgttgaatcactcttgtataaaagaaggaggcg 27158399  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 10896174 - 10896257
Alignment:
Q  36 aaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttccgtgaaatgcggcgcc 119  Q
    |||||||||||||||| |||| ||||| |||| |||||||| |||||||| ||||  |||||   || ||||||||||||||||    
T  10896174 aaatgaatcgtaccttgagggcgacgcagaataacccttatgtaggagaaggaggtactaaaaaatttcgtgaaatgcggcgcc 10896257  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 25410461 - 25410372
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgcta 95  Q
    |||||||  |||||| |||||| | |||||||||||||||||| ||  ||||||||| ||||||| ||||||||| ||||| || ||||||    
T  25410461 aaatgagattgaatgtgtaaaa-tatgtgggaaatgaatcgtatctggagggtgacgtggaatcatccttatataagagaaggaagcgcta 25410372  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 8868639 - 8868691
Alignment:
Q  127 ggtttggggtccacatgtcttcatgggattgatgttctagccggtccaaaaca 179  Q
    ||||| |||||||| ||||||||||||||||  | |||||||| |||||||||    
T  8868639 ggttttgggtccacgtgtcttcatgggattggcgctctagccgatccaaaaca 8868691  T

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Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 40800179 - 40800270
Alignment:
Q  21 gtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttccgtgaaatg 112  Q
    |||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||  ||||| |  ||||||||||||    
T  40800179 gtaaaagtgtggaggaaatgaatcgtaccttgagggtgacgcgaaatcacccttatataggagaaggagatgctaacgacttccgtgaaatg 40800270  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 17560803 - 17560895
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaa-tgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaa 96  Q
    |||||||| |||||| |||| | ||||||| ||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  17560803 aaatgaggttgaatgtgtaagaatgtgtggaaaaatgaattgtaccttgagggtgacgcagaatcacccttatataggagaaggaggcgctaa 17560895  T

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Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 31013610 - 31013695
Alignment:
Q  26 agtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttccgtgaaat 111  Q
    ||||||||| |||||||||||||||| |  |||||| ||||||||| ||||||||||||| |||||||||| |  |||||||||||    
T  31013610 agtgtgtggaaaatgaatcgtaccttgactgtgacgtggaatcacctttatataggagaaggaggcgctaacggcttccgtgaaat 31013695  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 15970626 - 15970715
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaa 96  Q
    |||||||  |||||| |||||| |||||||||||||||  |||||||  ||   ||||||||||||||||||||||||||||||||||||||    
T  15970626 aaatgagattgaatgtgtaaaaatgtgtgggaaatgaaatgtacctt--ggacaacgcggaatcacccttatataggagaatgaggcgctaa 15970715  T

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Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16907928 - 16908025
Alignment:
Q  1 tagaaaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtac-cttaagggtgacgcggaatcaccctta-tataggagaatgaggcgctaa 96  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||  ||| |||||||||  ||||||| ||| ||||| |||| ||||||||||    
T  16907928 tagaaaatgaggttgaatgtgtaaaagtgtgcgggaaatgaatcgtacgtttatgggtgacgcataatcacctttattatagaagaaggaggcgctaa 16908025  T

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Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 41501124 - 41501050
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatata 79  Q
    |||||||| | |||| ||||||  ||||||||||||||||||||||| |||||||||||||  ||| ||||||||    
T  41501124 aaatgaggtttaatgtgtaaaaaagtgtgggaaatgaatcgtaccttgagggtgacgcggagacactcttatata 41501050  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 41969395 - 41969470
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatga-atcgtaccttaagggtgacgcggaatcacccttatatag 80  Q
    |||||||| |||||||||||||  |||||| |||  | |||||||||| ||||||||||| | ||||||||||||||    
T  41969395 aaatgaggttgaatgggtaaaaa-gtgtggaaaaatatatcgtaccttgagggtgacgcgaagtcacccttatatag 41969470  T

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Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 30655819 - 30655917
Alignment:
Q  21 gtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttccgtgaaatgcggcgcc 119  Q
    ||||||| || |||||||||||| ||||||| ||||||| |||||||||||||||||||  |||| |||  |||||||  |||||||||||||||||||    
T  30655819 gtaaaagcgtttgggaaatgaattgtaccttgagggtgatgcggaatcacccttatatacaagaaggagatgctaaagaattccgtgaaatgcggcgcc 30655917  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 11714212 - 11714301
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgct 94  Q
    |||||||| |||||| |||||| ||| |||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||  |||||||    
T  11714212 aaatgaggttgaatgtgtaaaaatgtatgggaaatgaattgtaccttgagggtgacgtggagtcacccttatataggagaagaaggcgct 11714301  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 33189518 - 33189577
Alignment:
Q  21 gtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatatag 80  Q
    ||||||||||||||||||||||||||||||| | |||||||| || || |||||||||||    
T  33189518 gtaaaagtgtgtgggaaatgaatcgtaccttgatggtgacgctgagtctcccttatatag 33189577  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 7810201 - 7810115
Alignment:
Q  4 aaaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcg 92  Q
    ||||||| | |||||| |||||||  |||| |||||||||| |||||| |||||||| |||| ||||||||| ||||||||| ||||||    
T  7810201 aaaatgaagttgaatgtgtaaaag--tgtgcgaaatgaatcataccttcagggtgactcggagtcacccttacataggagaaggaggcg 7810115  T

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Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 39003194 - 39003268
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatata 79  Q
    |||||| | |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  39003194 aaatgaagttgaatgtgtaaaagtgtgtgggaaattaatcgtaccttgagggtgatgcggaatcacccttatata 39003268  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 1485427 - 1485491
Alignment:
Q  15 gaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatata 79  Q
    ||||| |||||| |||| |||||||||||| |||||| ||||||||||||||||| |||||||||    
T  1485427 gaatgtgtaaaaatgtgagggaaatgaatcataccttgagggtgacgcggaatcatccttatata 1485491  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 5696852 - 5696788
Alignment:
Q  32 tgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaa 96  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||||| | | ||||||||||    
T  5696852 tgggaaatgaatcgtaccttgagggtgacgcagaatcgcccttatatagggggaggaggcgctaa 5696788  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 6087643 - 6087552
Alignment:
Q  21 gtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttccgtgaaatg 112  Q
    |||||||||| || ||||||||||||| ||| |||||| ||| ||  |||| ||||||||||||| |||||| ||| | |||||||||||||    
T  6087643 gtaaaagtgtatgagaaatgaatcgtatcttgagggtgccgcagagccacctttatataggagaaggaggcgttaagggtttccgtgaaatg 6087552  T

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Target: scaffold0606 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 2026 - 1963
Alignment:
Q  21 gtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaa 85  Q
    |||||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  2026 gtaaaagtgtgtgg-aaatgaatcgtaccttgagggtgatgcagaatcacccttatataggagaa 1963  T

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Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 26562957 - 26563065
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaatgaggcgctaaagttttcc 104  Q
    |||||||| | |||| |||||||||||| |||||| ||||||||||| | ||||||||| |||||| |||| |||||| || |||||||||| |  |||     
T  26562957 aaatgaggttaaatgtgtaaaagtgtgtaggaaataaatcgtaccttgaaggtgacgcgaaatcactcttagataggataaagaggcgctaacgacttct 26563056  T
Q  105 gtgaaatgc 113  Q
    |||||||||    
T  26563057 gtgaaatgc 26563065  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 34889960 - 34890040
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggagaa 85  Q
    |||||||| |||||| ||| ||| |||||||||| ||||| |||||| ||||||| ||||||||||||||||| |||||||    
T  34889960 aaatgaggttgaatgtgtacaagcgtgtgggaaaagaatcataccttgagggtgatgcggaatcacccttatacaggagaa 34890040  T

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Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 12163738 - 12163666
Alignment:
Q  5 aaatgaggatgaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttata 77  Q
    ||||| || |||||| |||||| | |||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  12163738 aaatggggttgaatgtgtaaaattatgtgggaaatgaatcgtaacttgagggtgacgcggaatcgcccttata 12163666  T

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Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 42204988 - 42205050
Alignment:
Q  21 gtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatataggag 83  Q
    |||||||||||||| |||||||  ||| ||||||||||||| | |||||||||||||||||||    
T  42204988 gtaaaagtgtgtggaaaatgaactgtatcttaagggtgacgtgaaatcacccttatataggag 42205050  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 30678490 - 30678426
Alignment:
Q  15 gaatgggtaaaagtgtgtgggaaatgaatcgtaccttaagggtgacgcggaatcacccttatata 79  Q
    ||||| ||||||||  |||| ||||||||  |||||| ||||||| |||||||||||||||||||    
T  30678490 gaatgtgtaaaagtacgtggaaaatgaattctaccttgagggtgatgcggaatcacccttatata 30678426  T

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