View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12725_low_3 (Length: 267)
Name: NF12725_low_3
Description: NF12725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12725_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 35012924 - 35012690
Alignment:
| Q |
18 |
taattcagccaatgtttcaacttaatgcatgcatgtgatccacgaacgaaagcaactactgttgctgcatttgagttgagttaacggtctctatagtcta |
117 |
Q |
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| T |
35012924 |
taattcagccaatgtttcaacttaatgcatg----tgatccacgaacgaaagcaactactgttgctgcatttgagttgagttaacggtctctatagtcta |
35012829 |
T |
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| Q |
118 |
taatgaaaaatggttcgctagtaatttattaggacaacaaaaattgggtggtagacaaggtaagtgtttaaaaatcagagtaggtgcaaatgaaaattgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35012828 |
taatgaaaaatggttcgctagtaatttattaggacaacaaaaattgggtggtagacaaggtaagtgtttaaaaatcagagtaggtgcaaatgaaaattgt |
35012729 |
T |
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| Q |
218 |
aatttatacatgtgatcaatgtcttgttcgtagtttcat |
256 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
35012728 |
aatttatacatgtgatcaatgtcttgttcgtagtttcat |
35012690 |
T |
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