View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12728_low_13 (Length: 356)

Name: NF12728_low_13
Description: NF12728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12728_low_13
NF12728_low_13
[»] chr2 (13 HSPs)
chr2 (17-340)||(30220583-30220906)
chr2 (135-231)||(14871727-14871823)
chr2 (135-224)||(6646912-6647001)
chr2 (135-233)||(2144808-2144907)
chr2 (135-230)||(6511444-6511539)
chr2 (135-224)||(32972798-32972887)
chr2 (145-222)||(13961286-13961363)
chr2 (158-225)||(33412901-33412968)
chr2 (42-80)||(3091741-3091779)
chr2 (135-224)||(38821453-38821542)
chr2 (145-230)||(3412442-3412527)
chr2 (42-79)||(14891112-14891149)
chr2 (42-82)||(5954514-5954554)
[»] chr3 (13 HSPs)
chr3 (135-231)||(52564536-52564632)
chr3 (155-227)||(36505575-36505647)
chr3 (165-233)||(48612929-48612997)
chr3 (39-82)||(1295329-1295372)
chr3 (144-225)||(32631451-32631531)
chr3 (135-224)||(5393727-5393816)
chr3 (135-236)||(13348016-13348117)
chr3 (135-176)||(34456879-34456920)
chr3 (42-81)||(44855251-44855290)
chr3 (139-234)||(46965893-46965988)
chr3 (135-237)||(54260084-54260186)
chr3 (179-232)||(29212340-29212392)
chr3 (41-81)||(37988631-37988671)
[»] chr1 (16 HSPs)
chr1 (140-229)||(31433583-31433672)
chr1 (135-230)||(37454043-37454138)
chr1 (161-231)||(35848525-35848595)
chr1 (135-200)||(5507319-5507383)
chr1 (39-80)||(38019537-38019578)
chr1 (145-224)||(43893356-43893435)
chr1 (135-222)||(18639603-18639690)
chr1 (135-225)||(19442600-19442690)
chr1 (42-81)||(26585205-26585244)
chr1 (144-222)||(5617670-5617747)
chr1 (40-82)||(5959386-5959428)
chr1 (151-225)||(41062179-41062252)
chr1 (41-82)||(34157805-34157846)
chr1 (34-87)||(46281428-46281481)
chr1 (135-231)||(11597725-11597821)
chr1 (42-82)||(27352630-27352670)
[»] chr6 (9 HSPs)
chr6 (146-233)||(10053043-10053130)
chr6 (145-224)||(30945912-30945991)
chr6 (140-226)||(34851580-34851666)
chr6 (135-225)||(30565934-30566023)
chr6 (135-224)||(5522533-5522622)
chr6 (150-230)||(30956175-30956255)
chr6 (135-238)||(25127710-25127813)
chr6 (135-234)||(26595437-26595536)
chr6 (39-80)||(12280437-12280478)
[»] chr8 (15 HSPs)
chr8 (135-224)||(3946329-3946418)
chr8 (153-227)||(25150872-25150946)
chr8 (153-226)||(12765375-12765448)
chr8 (135-233)||(32954929-32955027)
chr8 (150-233)||(37754665-37754748)
chr8 (161-235)||(1248366-1248440)
chr8 (190-232)||(24795392-24795434)
chr8 (40-81)||(14531619-14531660)
chr8 (46-87)||(33511739-33511780)
chr8 (136-224)||(37657079-37657167)
chr8 (45-81)||(14228710-14228746)
chr8 (40-80)||(28623144-28623184)
chr8 (42-82)||(37343374-37343414)
chr8 (46-82)||(43344810-43344846)
chr8 (135-226)||(44331024-44331112)
[»] chr7 (18 HSPs)
chr7 (135-224)||(35192167-35192256)
chr7 (167-227)||(42853732-42853792)
chr7 (135-224)||(37899412-37899501)
chr7 (190-235)||(20337454-20337499)
chr7 (145-225)||(31487290-31487370)
chr7 (144-225)||(37832534-37832614)
chr7 (136-224)||(37905924-37906012)
chr7 (138-224)||(22638777-22638863)
chr7 (135-224)||(37899106-37899195)
chr7 (135-177)||(47448915-47448957)
chr7 (42-87)||(24680995-24681040)
chr7 (135-227)||(2230462-2230554)
chr7 (33-81)||(12645943-12645991)
chr7 (39-79)||(27688645-27688685)
chr7 (164-228)||(28953908-28953972)
chr7 (41-81)||(29763829-29763869)
chr7 (139-230)||(38344853-38344944)
chr7 (31-79)||(38547313-38547361)
[»] chr5 (8 HSPs)
chr5 (135-224)||(8920167-8920256)
chr5 (154-226)||(14323421-14323492)
chr5 (34-80)||(36572683-36572729)
chr5 (135-187)||(42225698-42225750)
chr5 (135-224)||(29463084-29463173)
chr5 (41-94)||(42225785-42225838)
chr5 (42-82)||(8959160-8959200)
chr5 (38-94)||(40584235-40584291)
[»] chr4 (11 HSPs)
chr4 (135-209)||(8457783-8457857)
chr4 (135-224)||(2401699-2401788)
chr4 (137-201)||(7209375-7209438)
chr4 (135-177)||(149425-149467)
chr4 (135-224)||(42062525-42062614)
chr4 (145-187)||(49954952-49954994)
chr4 (139-224)||(51225418-51225503)
chr4 (35-80)||(31240641-31240686)
chr4 (32-81)||(55960690-55960739)
chr4 (161-233)||(8810686-8810758)
chr4 (42-82)||(41495013-41495053)
[»] scaffold1086 (1 HSPs)
scaffold1086 (135-225)||(2364-2453)
[»] scaffold0034 (1 HSPs)
scaffold0034 (135-223)||(22667-22755)


Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 17 - 340
Target Start/End: Complemental strand, 30220906 - 30220583
Alignment:
Q  17 caaatatagattatcttaaaataatgagaaatgatatttgtataactattctgtgataacttttgggacaaatctctccctcgtattttcattgtgttct 116  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30220906 caaatttagattatcttaaaataatgagaaatgatatttgtacaactattctgtgataacttttgggacaaatctctccctcgtattttcattgtgttct 30220807  T
Q  117 cannnnnnnnnnnnnnnn--attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgt 214  Q
    ||                  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30220806 cactctctctctctctctctattgctttagtttttg--ccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagtggt 30220709  T
Q  215 tcaaataacatacctctttaataatagaaatttctcaattgaaatataagtttagtttcttattggatttaatttgtctacaatgtcagggtaaaactta 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30220708 tcaaataacatacctctttaataatagaaatttctcaattgaaatataagtttagtttcttattggatttaatttgtctacaatgtcagggtaaaactta 30220609  T
Q  315 ttttatacatacatgatacatccaac 340  Q
    ||||||||||||||||||||||||||    
T  30220608 ttttatacatacatgatacatccaac 30220583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 14871727 - 14871823
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctct 231  Q
    ||||||||  |||||||| ||| || ||||||||||| ||||| ||  ||||| ||||||||||| | |||| ||||||||||||||||||||||||    
T  14871727 attgctttgatttttgtgtcaagacatacatttctttctatatttttagttgtcccataagttgtacaaaaagtagttgttcaaataacatacctct 14871823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 6646912 - 6647001
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| ||  |||||||||| ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  6646912 attgctttggtttttgtgccaagactcacatttctttctatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 6647001  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 2144808 - 2144907
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtc--ctaaaaatagttgttcaaataacatacctctt 232  Q
    |||||||| ||||||||||||||||  | |||||||||||||| || | |||||||| ||||||||  | |||| |||||||||||||||||  ||||||    
T  2144808 attgctttggtttttgtgccaatactcatatttctttgtatat-ttagattgttccacaagttgtcaacaaaaattagttgttcaaataacactcctctt 2144906  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 6511539 - 6511444
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataacatacctc 230  Q
    |||||||| ||||||||| ||| ||  |||||||||| ||||| |||| |||| ||| ||||||||||| ||||| |||||||||||||||| ||||    
T  6511539 attgctttggtttttgtgtcaagactcacatttctttctatattttgg-ttgtcccacaagttgtcctacaaaatggttgttcaaataacattcctc 6511444  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 32972887 - 32972798
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| ||  |||||||||  ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  32972887 attgctttggtttttgtgccaagactcacatttcttactatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 32972798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 13961363 - 13961286
Alignment:
Q  145 tttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataa 222  Q
    |||| |||| ||||||| ||||||||||||||||||  |||||   |||||||||   ||||||||||||||||||||    
T  13961363 ttttcgtgctaataccttcatttctttgtatatctttagttgtattataagttgtttaaaaaatagttgttcaaataa 13961286  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 33412901 - 33412968
Alignment:
Q  158 acctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataacat 225  Q
    |||||||||||||||||||| |||  ||||||||||| |||||  | ||||||||||||||||||||||    
T  33412901 acctacatttctttgtatattttga-ttgttccataaattgtcaaataaaatagttgttcaaataacat 33412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 3091741 - 3091779
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataactttt 80  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  3091741 gagaaatgatatttgtacaactattttgtgataactttt 3091779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 38821453 - 38821542
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtc-ctaaaaatagttgttcaaataaca 224  Q
    |||||||| || |||||||||||||  | |||||||||||||| || |||||| ||| ||||||||   |||||| |||||||||||||||    
T  38821453 attgctttggtatttgtgccaatactcatatttctttgtatat-ttaggttgtcccaaaagttgtcaacaaaaattgttgttcaaataaca 38821542  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 3412527 - 3412442
Alignment:
Q  145 tttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctc 230  Q
    |||||||| ||||| |||| |||||||||| || |  ||||||| || ||||||||  | ||||||||||||||| |||| |||||    
T  3412527 tttttgtggcaatatctacttttctttgtaaatttatggttgtttcaaaagttgtcacataaatagttgttcaaacaacacacctc 3412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 14891149 - 14891112
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttt 79  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  14891149 gagaaatgatatttgtacaactattttgtgataacttt 14891112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 5954554 - 5954514
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  5954554 gagaaatgatatttgtacaaccattatgtgataacttttgg 5954514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 52564632 - 52564536
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctct 231  Q
    |||||||| ||||| |||||||||||||| |||||||||| ||||  |||||| |||||||||||| || |||| ||||||||||||||||||||||    
T  52564632 attgctttggttttagtgccaatacctacttttctttgtaaatctatggttgtcccataagttgtcatagaaatggttgttcaaataacatacctct 52564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 36505647 - 36505575
Alignment:
Q  155 aatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatac 227  Q
    ||||||||||||||||||| || |||  |||||||||||||||||  ||||||| |||||| |||||||||||    
T  36505647 aatacctacatttctttgtctaactttagttgttccataagttgttttaaaaatggttgtttaaataacatac 36505575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 48612929 - 48612997
Alignment:
Q  165 tttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttt 233  Q
    |||||||||||||||| |||| || || ||||| ||| | |||||| ||||||||||||||||||||||    
T  48612929 tttctttgtatatctttggttattacaaaagttatcccacaaatagatgttcaaataacatacctcttt 48612997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 1295329 - 1295372
Alignment:
Q  39 aatgagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  1295329 aatgagaaatgatatttgtacaactattttgtgataacttttgg 1295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 32631531 - 32631451
Alignment:
Q  144 gtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtc-ctaaaaatagttgttcaaataacat 225  Q
    ||||||||||||| |||||||||||||| ||||| || ||||||||||| ||||||| |  ||||| ||||||||||||||||    
T  32631531 gtttttgtgccaagacctacatttctttatatat-tttggttgttccat-agttgtcacataaaatggttgttcaaataacat 32631451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 5393816 - 5393727
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataaca 224  Q
    |||||||| ||||| ||| ||| || ||||||||||| |||||  | |||||| ||||||||||| | |||| | |||||||||||||||    
T  5393816 attgctttggttttcgtgtcaagacatacatttctttctatattcttggttgtaccataagttgtacaaaaagtggttgttcaaataaca 5393727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 13348117 - 13348016
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttta 234  Q
    |||||||| ||||||||  ||||||||   |||||||||| |  || |||||| ||| |||||||| || |||| | ||||||||||||||| |||||||    
T  13348117 attgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactcttta 13348018  T
Q  235 at 236  Q
    ||    
T  13348017 at 13348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 34456879 - 34456920
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtata 176  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  34456879 attgctttaatttttgtgccaatacctaaatttctttgtata 34456920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 44855251 - 44855290
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttg 81  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  44855251 gagaaatgatatttgtataactattttgtgacaacttttg 44855290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 46965988 - 46965893
Alignment:
Q  139 ctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttta 234  Q
    |||||||||||||| |||||||||| |||||||||| || |  | |||| | | ||||||||  | |||| ||||||||||||||| | |||||||    
T  46965988 ctttagtttttgtgtcaatacctacttttctttgtaaatttatgattgtcctaaaagttgtcacacaaattgttgttcaaataacacatctcttta 46965893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 54260186 - 54260084
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataacatacctcttt 233  Q
    ||||||||  |||||||||||| ||  |||||||||| ||||| |||| |||| ||| || |||| ||| |||||||||||||||||||||  |||| ||    
T  54260186 attgctttgatttttgtgccaaaactcacatttctttttatattttgg-ttgtcccacaaattgttctacaaaatagttgttcaaataacactcctcatt 54260088  T
Q  234 aata 237  Q
    ||||    
T  54260087 aata 54260084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 29212392 - 29212340
Alignment:
Q  179 ttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctctt 232  Q
    ||||| ||||||||||||| || ||||| | |||||||||||||||||||||||    
T  29212392 ttgggatgttccataagttatcttaaaa-tggttgttcaaataacatacctctt 29212340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 37988631 - 37988671
Alignment:
Q  41 tgagaaatgatatttgtataactattctgtgataacttttg 81  Q
    ||||||||||||||| |||||||||| ||||| ||||||||    
T  37988631 tgagaaatgatatttatataactattttgtgacaacttttg 37988671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 31433583 - 31433672
Alignment:
Q  140 tttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacct 229  Q
    ||||||||| ||| ||||||||||||| ||||||| ||||  ||||||  |||||||| || || |||||||||||||||||||| ||||    
T  31433583 tttagttttcgtgtcaatacctacattactttgtaaatctatggttgtctcataagttatcatacaaatagttgttcaaataacacacct 31433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 37454043 - 37454138
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctc 230  Q
    ||||||||  |||| ||| ||| || ||||||| ||| ||||| ||  ||||| ||||||||||| | |||| |||||||||||||||||||||||    
T  37454043 attgctttgattttcgtgtcaaaacatacatttttttctatatttttagttgtcccataagttgtacaaaaagtagttgttcaaataacatacctc 37454138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 35848525 - 35848595
Alignment:
Q  161 tacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctct 231  Q
    ||||||||||| |||||  | |||||| ||||||||||| | |||| | ||||||||||||||||||||||    
T  35848525 tacatttctttctatattcttggttgtcccataagttgtacaaaaagtggttgttcaaataacatacctct 35848595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 5507319 - 5507383
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtc 200  Q
    |||||||| ||||||| ||||| |||||||||||||||||||| || | ||||| |||||||||||    
T  5507319 attgctttggtttttgagccaaaacctacatttctttgtatat-tttgcttgtttcataagttgtc 5507383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 38019578 - 38019537
Alignment:
Q  39 aatgagaaatgatatttgtataactattctgtgataactttt 80  Q
    ||||||||||||||||||||||| |||| |||||||||||||    
T  38019578 aatgagaaatgatatttgtataattattttgtgataactttt 38019537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 43893356 - 43893435
Alignment:
Q  145 tttttgtgccaatacct-acatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataaca 224  Q
    |||||||||| | |||| |||||||||||||||| |||| |||| ||| |||||||||  ||||| |||||||||||||||    
T  43893356 tttttgtgcctagacctcacatttctttgtatattttgg-ttgtcccacaagttgtccgtaaaatggttgttcaaataaca 43893435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 18639690 - 18639603
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataa 222  Q
    |||| ||||||||| ||| |||||||||| | |||||||| || ||  |||||||||||| ||||| || ||||  ||||||||||||    
T  18639690 attgttttagttttcgtgtcaatacctacttatctttgtaaatattttgttgttccataaattgtcatacaaatgattgttcaaataa 18639603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 19442600 - 19442690
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttg-tcctaaaaatagttgttcaaataacat 225  Q
    |||||||| ||||||||||||| ||||| || ||||||||||| ||  ||||| | |||||||| | |  ||||||||||||||||||||||    
T  19442600 attgctttggtttttgtgccaagacctatatatctttgtatat-tttagttgtccaataagttgttacataaaatagttgttcaaataacat 19442690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 26585244 - 26585205
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttg 81  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  26585244 gagaaatgatatttgtacaactattttgtgataacttttg 26585205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 5617747 - 5617670
Alignment:
Q  144 gtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataa 222  Q
    |||||||||  ||||| ||||||||||||||||| || ||||||  ||||| ||||||   ||||||||||||||||||    
T  5617747 gtttttgtgttaatacatacatttctttgtatat-tttggttgtcacataaattgtccattaaatagttgttcaaataa 5617670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 5959386 - 5959428
Alignment:
Q  40 atgagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||    
T  5959386 atgagaaatgatatttgtataaccattatgtgacaacttttgg 5959428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 41062179 - 41062252
Alignment:
Q  151 tgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacat 225  Q
    ||||||||||||||||||| ||||||| || |||| | | | ||||| ||| ||||||| |||||||||||||||    
T  41062179 tgccaatacctacatttctctgtatat-tttggttatccaagaagttatccaaaaaataattgttcaaataacat 41062252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 34157805 - 34157846
Alignment:
Q  41 tgagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||||||| |||| |||||||| ||||||    
T  34157805 tgagaaatgatatttgtataattattttgtgataatttttgg 34157846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 46281428 - 46281481
Alignment:
Q  34 aaaataatgagaaatgatatttgtataactattctgtgataacttttgggacaa 87  Q
    |||| |||||||||||||||||||| ||||||| ||| |||| ||||| |||||    
T  46281428 aaaaaaatgagaaatgatatttgtacaactattttgtaataatttttgtgacaa 46281481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 11597725 - 11597821
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctct 231  Q
    |||| ||| ||||| |||| |||| |||| |||||||||| ||||  |||||| ||||||||||||    |||| | ||||||||||||| ||||||    
T  11597725 attgttttggttttcgtgctaatatctacttttctttgtaaatctatggttgtcccataagttgtcaagcaaatggatgttcaaataacacacctct 11597821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 27352630 - 27352670
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  27352630 gagaaatgatatttgtacaaccattttgtgataacttttgg 27352670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 10053130 - 10053043
Alignment:
Q  146 ttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataacatacctcttt 233  Q
    ||||||||||| |||||||||||||||||||| ||  ||||| ||| ||||| ||| | ||||||||||||||||||||||| ||||||    
T  10053130 ttttgtgccaaaacctacatttctttgtatat-tttagttgtcccacaagttatccaataaaatagttgttcaaataacatatctcttt 10053043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 30945912 - 30945991
Alignment:
Q  145 tttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataaca 224  Q
    |||| ||||||||| |||| |||||||||| ||||  |||||||||||||||| || || |||| |||||||||||||||    
T  30945912 ttttcgtgccaatatctacttttctttgtaaatctatggttgttccataagttttcatacaaatggttgttcaaataaca 30945991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 34851580 - 34851666
Alignment:
Q  140 tttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacata 226  Q
    |||||||||||||  ||||  |||||||||||||| ||||| ||||||  ||||||||||  ||||||| ||| |||||||||||||    
T  34851580 tttagtttttgtgttaatatatacatttctttgtaaatctttggttgtctcataagttgttttaaaaatggttcttcaaataacata 34851666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 30565934 - 30566023
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacat 225  Q
    |||| ||| ||||| |||||||||||||||||||||| ||| | ||  ||||| |||||||||||| ||||||| |||| |||| ||||||    
T  30565934 attgttttggttttcgtgccaatacctacatttctttttat-tatttagttgtaccataagttgtcataaaaatggttggtcaactaacat 30566023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 5522622 - 5522533
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataaca 224  Q
    |||||||| |||||||||| ||||||||| || |||| || || |  |||||||||| ||||||||   ||||| |||||||||||||||    
T  5522622 attgctttggtttttgtgctaatacctactttcctttataaatttatggttgttccaaaagttgtcaccaaaattgttgttcaaataaca 5522533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 30956175 - 30956255
Alignment:
Q  150 gtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctc 230  Q
    ||||||||| |||  |||||||||| ||||  |||||| ||||||||| || || |||| ||||||||||||||| |||||    
T  30956175 gtgccaatatctaattttctttgtaaatctatggttgtcccataagttttcatataaatggttgttcaaataacaaacctc 30956255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 25127813 - 25127710
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttta 234  Q
    |||||||| ||||  ||| |||||||||| |||||||||| || |  |||||| ||| || |||||  | |||| ||||||||||||||| |||||| ||    
T  25127813 attgctttggtttccgtgtcaatacctacttttctttgtaaatttatggttgtcccagaatttgtcgcacaaatggttgttcaaataacacacctctata 25127714  T
Q  235 ataa 238  Q
    ||||    
T  25127713 ataa 25127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 26595437 - 26595536
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttta 234  Q
    |||||||| ||||||||| ||||||||   |||||||||| |  || ||||||| || |||||||| || |||| | ||||||||||||| | |||||||    
T  26595437 attgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttta 26595536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 12280437 - 12280478
Alignment:
Q  39 aatgagaaatgatatttgtataactattctgtgataactttt 80  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  12280437 aatgagaaatgatatttgtataactattttctgacaactttt 12280478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 3946329 - 3946418
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| ||  |||||||||| ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  3946329 attgctttggtttttgtgccaagactcacatttctttctatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 3946418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 25150946 - 25150872
Alignment:
Q  153 ccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatac 227  Q
    |||| ||||| ||||||||||||||||| |||||| || ||||||| || |||||| ||||||||||| ||||||    
T  25150946 ccaaaacctatatttctttgtatatcttaggttgtcccgtaagttgcccaaaaaatggttgttcaaattacatac 25150872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 12765375 - 12765448
Alignment:
Q  153 ccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacata 226  Q
    |||||| |||||||||||||| |||||| | ||||||||||| || |  ||||||| |||||||||||||||||    
T  12765375 ccaatagctacatttctttgtttatctttgtttgttccataatttatggtaaaaatggttgttcaaataacata 12765448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 32954929 - 32955027
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataacatacctcttt 233  Q
    |||||||| ||||||||| ||| ||  |||||||||| ||||| |||| |||| | | ||||||||||| ||||| |||||||||||||||  |||||||    
T  32954929 attgctttggtttttgtgtcaagactcacatttctttctatattttgg-ttgtactacaagttgtcctataaaatggttgttcaaataacactcctcttt 32955027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 37754665 - 37754748
Alignment:
Q  150 gtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttt 233  Q
    |||||||||||||  |||||||||| || |   ||||||||| |||||||| || |||| |||||| |||||||| ||||||||    
T  37754665 gtgccaatacctatttttctttgtaaatttaaagttgttccaaaagttgtcatacaaatggttgtttaaataacacacctcttt 37754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 1248366 - 1248440
Alignment:
Q  161 tacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctctttaa 235  Q
    ||||||||||| |||||  | | ||||  ||||| |||| | |||||||||||||||||||||||||||| ||||    
T  1248366 tacatttctttctatattcttgtttgtctcataaattgtacaaaaaatagttgttcaaataacatacctcattaa 1248440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 24795392 - 24795434
Alignment:
Q  190 cataagttgtcctaaaaatagttgttcaaataacatacctctt 232  Q
    |||||||||||  | ||||||||||||||||||||||||||||    
T  24795392 cataagttgtcaaacaaatagttgttcaaataacatacctctt 24795434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 14531619 - 14531660
Alignment:
Q  40 atgagaaatgatatttgtataactattctgtgataacttttg 81  Q
    ||||||||||||||||||| ||||||| | ||||||||||||    
T  14531619 atgagaaatgatatttgtacaactattttatgataacttttg 14531660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 33511780 - 33511739
Alignment:
Q  46 aatgatatttgtataactattctgtgataacttttgggacaa 87  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||    
T  33511780 aatgatatttgtacaactattttgtgaaaacttttgggacaa 33511739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 37657079 - 37657167
Alignment:
Q  136 ttgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    ||||||| ||||||||||||| ||  |||||||||  ||||| |||| |||| ||  |||||||| || |||||||||||||||||||||    
T  37657079 ttgctttggtttttgtgccaagactcacatttcttactatattttgg-ttgtccctgaagttgtcatacaaaatagttgttcaaataaca 37657167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 14228710 - 14228746
Alignment:
Q  45 aaatgatatttgtataactattctgtgataacttttg 81  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  14228710 aaatgatatttgtacaactattttgtgataacttttg 14228746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 28623184 - 28623144
Alignment:
Q  40 atgagaaatgatatttgtataactattctgtgataactttt 80  Q
    ||||||||||||||||||| ||| ||| |||||||||||||    
T  28623184 atgagaaatgatatttgtacaaccattatgtgataactttt 28623144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 37343374 - 37343414
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||| ||||||| |||||||| ||||||    
T  37343374 gagaaatgatatttgtacaactattatgtgataatttttgg 37343414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 43344810 - 43344846
Alignment:
Q  46 aatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  43344810 aatgatatttgtataactattgtgtgataccttttgg 43344846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 44331024 - 44331112
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacata 226  Q
    |||||||| ||||| ||||| |||| |||||||| ||||||||| | |||| |||  |||||||||| ||||||  || |||||||||||||    
T  44331024 attgctttggttttcgtgccgatacgtacatttcgttgtatatcattggtt-ttc--taagttgtccaaaaaatgtttattcaaataacata 44331112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 35192256 - 35192167
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||| | ||  |||||||||| ||||| || | |||||||||||||||||||| |||||| ||||||||||||||    
T  35192256 attgctttggtttttgtgcctagactcacatttctttatatattttag-ttgttccataagttgtcctataaaataattgttcaaataaca 35192167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 42853792 - 42853732
Alignment:
Q  167 tctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatac 227  Q
    |||||||||||||| | |||| |||||| |||||| |||||| ||||||||||||||||||    
T  42853792 tctttgtatatctttgattgtcccataatttgtccaaaaaatggttgttcaaataacatac 42853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 37899412 - 37899501
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| ||  |||||||||  ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  37899412 attgctttggtttttgtgccaagactcacatttcttactatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 37899501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20337454 - 20337499
Alignment:
Q  190 cataagttgtcctaaaaatagttgttcaaataacatacctctttaa 235  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||    
T  20337454 cataagttgtcatacaaatagttgttcaaataacacacctctttaa 20337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 31487290 - 31487370
Alignment:
Q  145 tttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtc-ctaaaaatagttgttcaaataacat 225  Q
    |||||||| ||| ||||||||||||||||| || || ||||||||||||||||||| |  ||| | ||||||||||||||||    
T  31487290 tttttgtgtcaagacctacatttctttgtaaat-tttggttgttccataagttgtcacataaagtggttgttcaaataacat 31487370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 37832534 - 37832614
Alignment:
Q  144 gtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacat 225  Q
    ||||| ||| ||||||||||||| ||||||||||||| |||||| |  || ||||||  |||||| ||||||||||||||||    
T  37832534 gttttcgtgtcaatacctacatt-ctttgtatatctttggttgtcctgtaggttgtctaaaaaatggttgttcaaataacat 37832614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 37905924 - 37906012
Alignment:
Q  136 ttgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    ||||||| ||||||||||||| ||  |||||||||  ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  37905924 ttgctttggtttttgtgccaagactcacatttcttactatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 37906012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 22638863 - 22638777
Alignment:
Q  138 gctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    ||||| ||||||||||||| ||  |||||||||| ||||| || | |||| ||| ||||||||||| ||||| |||||||||||||||    
T  22638863 gctttggtttttgtgccaagactaacatttctttctatat-tttgattgtcccacaagttgtcctacaaaatggttgttcaaataaca 22638777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 37899195 - 37899106
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| |   |||||||||  ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  37899195 attgctttggtttttgtgccaagattcacatttcttactatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 37899106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 47448915 - 47448957
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatat 177  Q
    |||||||| |||||||||||| |||||| ||||||||||||||    
T  47448915 attgctttggtttttgtgccactacctaaatttctttgtatat 47448957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 24681040 - 24680995
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttgggacaa 87  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||    
T  24681040 gagaaatgatatttgtataaccattttcttataacttttgggacaa 24680995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 2230462 - 2230554
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatac 227  Q
    ||||||||| |||| ||  |||||||||||||||||||||||| || | || |   ||||||||| | ||||||  || ||||||||||||||    
T  2230462 attgctttaattttcgtaacaatacctacatttctttgtatatatttgattatcatataagttgttcaaaaaatgattattcaaataacatac 2230554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 12645991 - 12645943
Alignment:
Q  33 taaaataatgagaaatgatatttgtataactattctgtgataacttttg 81  Q
    |||||| ||||||||||||||||| ||| ||||| |||||||| |||||    
T  12645991 taaaattatgagaaatgatatttgaatatctattttgtgataatttttg 12645943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 27688645 - 27688685
Alignment:
Q  39 aatgagaaatgatatttgtataactattctgtgataacttt 79  Q
    |||||||||||||||||||||||||| | ||||| ||||||    
T  27688645 aatgagaaatgatatttgtataactactatgtgacaacttt 27688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 28953972 - 28953908
Alignment:
Q  164 atttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacc 228  Q
    ||||||||||||||||| |||||||   |  ||||| | ||||||||||||| ||||||||||||    
T  28953972 atttctttgtatatctttggttgttttgtttgttgtaccaaaaatagttgtttaaataacatacc 28953908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 29763829 - 29763869
Alignment:
Q  41 tgagaaatgatatttgtataactattctgtgataacttttg 81  Q
    |||||||||||||||||| ||| ||| ||||||||||||||    
T  29763829 tgagaaatgatatttgtacaaccattttgtgataacttttg 29763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 38344853 - 38344944
Alignment:
Q  139 ctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaa-aaatagttgttcaaataacatacctc 230  Q
    |||||||||||||| || | |||| |||||||||||| | || | |||||| | ||||||| |||| ||| ||||||||||||||||| ||||    
T  38344853 ctttagtttttgtgtcactgcctaaatttctttgtatgt-tttgattgttcaaaaagttgttctaacaaagagttgttcaaataacattcctc 38344944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 38547361 - 38547313
Alignment:
Q  31 cttaaaataatgagaaatgatatttgtataactattctgtgataacttt 79  Q
    ||||||||||| |||||||||||||||| ||||||| | ||| ||||||    
T  38547361 cttaaaataataagaaatgatatttgtacaactattttttgacaacttt 38547313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 8920167 - 8920256
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| ||  |||||||||| ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  8920167 attgctttggtttttgtgccaagactcacatttctttctatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 8920256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14323492 - 14323421
Alignment:
Q  154 caatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacata 226  Q
    ||||||||| ||||||||||  |||||  ||||| | ||||||||||| ||||||||||||||||||||||||    
T  14323492 caatacctatatttctttgtg-atcttaagttgtcctataagttgtccaaaaaatagttgttcaaataacata 14323421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 36572683 - 36572729
Alignment:
Q  34 aaaataatgagaaatgatatttgtataactattctgtgataactttt 80  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  36572683 aaaataaagagaaatgatatttgtataactattttgtgacaactttt 36572729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 42225750 - 42225698
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgt 187  Q
    |||||| | ||||| |||||| |||||||||||||||||||||||| ||||||    
T  42225750 attgctctggttttcgtgccactacctacatttctttgtatatctttggttgt 42225698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 29463084 - 29463173
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtc-ctaaaaatagttgttcaaataaca 224  Q
    ||||||||  |||||||||||||||  | |||||||||||||| || |||||| ||| ||||||||   |||||| |||||||||||||||    
T  29463084 attgctttgatttttgtgccaatactcatatttctttgtatat-ttaggttgtcccacaagttgtcaacaaaaatggttgttcaaataaca 29463173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 42225838 - 42225785
Alignment:
Q  41 tgagaaatgatatttgtataactattctgtgataacttttgggacaaatctctc 94  Q
    |||||||||||||||||| ||| ||| ||| | |||||||||||||| ||||||    
T  42225838 tgagaaatgatatttgtaaaaccattttgtaacaacttttgggacaactctctc 42225785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 8959160 - 8959200
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  8959160 gagaaatgatatttgtacaactattatgtgacaacttttgg 8959200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 40584291 - 40584235
Alignment:
Q  38 taatgagaaatgatatttgtataactattctgtgataacttttgggacaaatctctc 94  Q
    |||||||||||||||||| || ||||||| | | | |||||||||||||| ||||||    
T  40584291 taatgagaaatgatatttctacaactatttttttacaacttttgggacaactctctc 40584235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 8457783 - 8457857
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaata 209  Q
    |||||| ||||||| |||| ||| |||||||||||||||||| ||| |||||| ||||||||||||  |||||||    
T  8457783 attgctctagttttcgtgctaatgcctacatttctttgtatacctttggttgtcccataagttgtctcaaaaata 8457857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 2401699 - 2401788
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||||||| ||||||||||||| ||  |||||||||  ||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||    
T  2401699 attgctttggtttttgtgccaagactcacatttcttactatat-tttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 2401788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 7209375 - 7209438
Alignment:
Q  137 tgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcc 201  Q
    |||||| ||||||||| ||| || ||||||||||||||||| || |||||||||| |||||||||    
T  7209375 tgctttggtttttgtggcaaaacttacatttctttgtatat-tttggttgttccacaagttgtcc 7209438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 149467 - 149425
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatat 177  Q
    |||||||||||||||||| || |||||| ||||||||||||||    
T  149467 attgctttagtttttgtgtcactacctaaatttctttgtatat 149425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 42062614 - 42062525
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    ||||||||  |||||||||| | ||  |||||||||||||||| || |||||| ||| ||||||||| | ||||| |||||||||||||||    
T  42062614 attgctttgatttttgtgcctagactcacatttctttgtatat-tttggttgtcccacaagttgtcccataaaatggttgttcaaataaca 42062525  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 49954994 - 49954952
Alignment:
Q  145 tttttgtgccaatacctacatttctttgtatatcttgggttgt 187  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||    
T  49954994 tttttgtgtcaataactacatttctttgtatatctttggttgt 49954952  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 51225503 - 51225418
Alignment:
Q  139 ctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataaca 224  Q
    |||| ||||||||||||| ||  |||||||||| ||||| |||| |||| ||| |||||||  || |||||||||||||||||||||    
T  51225503 ctttggtttttgtgccaagactcacatttctttttatattttgg-ttgtcccacaagttgttttataaaatagttgttcaaataaca 51225418  T

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Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 31240641 - 31240686
Alignment:
Q  35 aaataatgagaaatgatatttgtataactattctgtgataactttt 80  Q
    |||||||||||||||||||||||| ||| | | |||||||||||||    
T  31240641 aaataatgagaaatgatatttgtacaaccactttgtgataactttt 31240686  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 55960690 - 55960739
Alignment:
Q  32 ttaaaataatgagaaatgatatttgtataactattctgtgataacttttg 81  Q
    |||||| |||||||||||||||||||||||| ||| ||  ||||||||||    
T  55960690 ttaaaaaaatgagaaatgatatttgtataaccattttggtataacttttg 55960739  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 8810686 - 8810758
Alignment:
Q  161 tacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacatacctcttt 233  Q
    ||||||||||| |||||  | ||||||  |||||||||| | |||| | ||||||||||||||||| ||||||    
T  8810686 tacatttctttctatattcttggttgtctcataagttgtacaaaaagtggttgttcaaataacatatctcttt 8810758  T

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Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 41495013 - 41495053
Alignment:
Q  42 gagaaatgatatttgtataactattctgtgataacttttgg 82  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  41495013 gagaaatgatatttgtacaactattatgtgacaacttttgg 41495053  T

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Target: scaffold1086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 2364 - 2453
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtcctaaaaatagttgttcaaataacat 225  Q
    |||| ||| ||||| |||||||||||||||||||||| ||| | ||  ||||| |||||||||||| ||||||| |||| |||| ||||||    
T  2364 attgttttggttttcgtgccaatacctacatttctttttat-tatttagttgtaccataagttgtcataaaaatggttggtcaactaacat 2453  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 22667 - 22755
Alignment:
Q  135 attgctttagtttttgtgccaatacctacatttctttgtatatcttgggttgttccataagttgtccta-aaaatagttgttcaaataac 223  Q
    ||||||||  |||||||||| | ||  |||||||||||||||| || |||||| ||| ||||||||| | ||||| ||||||||||||||    
T  22667 attgctttgatttttgtgcctagactcacatttctttgtatat-tttggttgtcccacaagttgtcccataaaatggttgttcaaataac 22755  T

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