View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12728_low_16 (Length: 330)

Name: NF12728_low_16
Description: NF12728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12728_low_16
NF12728_low_16
[»] chr1 (60 HSPs)
chr1 (1-83)||(34756429-34756511)
chr1 (1-80)||(8224773-8224852)
chr1 (1-80)||(15034664-15034743)
chr1 (1-80)||(24273209-24273288)
chr1 (1-80)||(28632575-28632653)
chr1 (1-80)||(50005084-50005163)
chr1 (10-80)||(15034743-15034813)
chr1 (10-80)||(23536072-23536142)
chr1 (1-80)||(4038150-4038229)
chr1 (1-80)||(26501068-26501147)
chr1 (2-80)||(38277420-38277498)
chr1 (2-80)||(45565399-45565477)
chr1 (4-77)||(44410319-44410392)
chr1 (1-76)||(37448390-37448465)
chr1 (14-80)||(4038080-4038146)
chr1 (10-80)||(27804270-27804340)
chr1 (10-80)||(30190220-30190290)
chr1 (3-80)||(37036940-37037017)
chr1 (1-77)||(28745805-28745880)
chr1 (1-80)||(6470675-6470754)
chr1 (1-80)||(31166315-31166394)
chr1 (1-76)||(44570687-44570762)
chr1 (1-80)||(47165201-47165280)
chr1 (10-80)||(40264114-40264184)
chr1 (11-80)||(43622977-43623046)
chr1 (1-80)||(27804340-27804419)
chr1 (10-81)||(28745880-28745951)
chr1 (1-80)||(49659222-49659300)
chr1 (1-55)||(5474474-5474528)
chr1 (10-80)||(50005163-50005233)
chr1 (1-78)||(37447891-37447968)
chr1 (15-80)||(38277504-38277568)
chr1 (1-68)||(946930-946997)
chr1 (13-80)||(32287934-32288001)
chr1 (1-80)||(39887132-39887211)
chr1 (10-80)||(27935569-27935639)
chr1 (6-68)||(29446767-29446828)
chr1 (1-47)||(32572960-32573006)
chr1 (10-76)||(32573006-32573072)
chr1 (10-80)||(34756511-34756581)
chr1 (10-62)||(37214842-37214894)
chr1 (1-80)||(946381-946458)
chr1 (1-47)||(15245480-15245526)
chr1 (1-67)||(31195474-31195540)
chr1 (1-47)||(40264068-40264114)
chr1 (1-58)||(15467952-15468009)
chr1 (10-74)||(25889169-25889232)
chr1 (1-80)||(10166504-10166583)
chr1 (1-80)||(34003382-34003461)
chr1 (25-80)||(44410410-44410465)
chr1 (1-80)||(51847857-51847935)
chr1 (1-47)||(23536142-23536188)
chr1 (1-47)||(27935523-27935569)
chr1 (1-67)||(32647319-32647385)
chr1 (1-47)||(37214894-37214939)
chr1 (1-47)||(37447348-37447394)
chr1 (1-47)||(44571239-44571285)
chr1 (1-55)||(47541977-47542031)
chr1 (2-47)||(32128068-32128113)
chr1 (11-47)||(45565479-45565515)
[»] chr4 (57 HSPs)
chr4 (1-80)||(15660258-15660337)
chr4 (1-80)||(31473854-31473933)
chr4 (1-80)||(36455912-36455991)
chr4 (1-77)||(10128049-10128125)
chr4 (1-81)||(28845875-28845955)
chr4 (1-80)||(7352817-7352896)
chr4 (1-80)||(10633037-10633116)
chr4 (10-80)||(49111396-49111466)
chr4 (1-77)||(1539649-1539725)
chr4 (1-73)||(42844555-42844627)
chr4 (1-80)||(2125862-2125941)
chr4 (10-80)||(857323-857393)
chr4 (10-80)||(4896716-4896786)
chr4 (11-80)||(1112610-1112679)
chr4 (1-77)||(1107127-1107203)
chr4 (12-80)||(11040973-11041040)
chr4 (199-310)||(2299394-2299505)
chr4 (10-80)||(7352896-7352966)
chr4 (6-80)||(14982285-14982359)
chr4 (10-80)||(26250914-26250984)
chr4 (10-80)||(28845955-28846025)
chr4 (1-58)||(857266-857323)
chr4 (1-58)||(29091164-29091221)
chr4 (7-80)||(36456007-36456080)
chr4 (11-80)||(41498575-41498644)
chr4 (1-65)||(35470142-35470206)
chr4 (8-79)||(1112704-1112775)
chr4 (17-80)||(4896653-4896716)
chr4 (1-80)||(16516176-16516255)
chr4 (14-80)||(5715749-5715815)
chr4 (16-77)||(11348327-11348388)
chr4 (28-80)||(4441342-4441394)
chr4 (1-60)||(41139498-41139557)
chr4 (1-79)||(9451121-9451199)
chr4 (10-80)||(10127979-10128049)
chr4 (18-80)||(15660188-15660250)
chr4 (1-55)||(26534523-26534577)
chr4 (3-80)||(55266852-55266929)
chr4 (1-77)||(19461725-19461801)
chr4 (10-80)||(1107056-1107127)
chr4 (2-53)||(16300209-16300260)
chr4 (37-80)||(31742875-31742918)
chr4 (2-80)||(41498494-41498573)
chr4 (1-80)||(46242533-46242612)
chr4 (10-80)||(467887-467955)
chr4 (1-47)||(26250984-26251030)
chr4 (38-80)||(42542979-42543021)
chr4 (1-47)||(42775643-42775689)
chr4 (10-80)||(42844627-42844697)
chr4 (16-80)||(31742781-31742845)
chr4 (1-80)||(42776642-42776721)
chr4 (1-47)||(11041042-11041088)
chr4 (1-67)||(12169037-12169102)
chr4 (50-80)||(47108323-47108353)
chr4 (1-47)||(53760779-53760825)
chr4 (9-66)||(10354361-10354418)
chr4 (1-79)||(31947596-31947675)
[»] chr8 (52 HSPs)
chr8 (1-80)||(3853621-3853700)
chr8 (1-80)||(3858079-3858158)
chr8 (1-80)||(24044965-24045044)
chr8 (1-80)||(17110944-17111023)
chr8 (1-80)||(4156242-4156321)
chr8 (1-68)||(13404902-13404969)
chr8 (1-80)||(23011739-23011818)
chr8 (1-80)||(29257350-29257429)
chr8 (1-80)||(29482806-29482885)
chr8 (1-80)||(33377296-33377375)
chr8 (2-80)||(33902672-33902748)
chr8 (1-80)||(44346677-44346756)
chr8 (1-80)||(44889359-44889438)
chr8 (10-80)||(17110874-17110944)
chr8 (10-80)||(42711364-42711434)
chr8 (1-80)||(14800035-14800114)
chr8 (1-80)||(35979003-35979082)
chr8 (2-80)||(33986009-33986087)
chr8 (12-80)||(40046809-40046877)
chr8 (1-68)||(8049271-8049338)
chr8 (1-80)||(11744718-11744797)
chr8 (1-80)||(28324661-28324740)
chr8 (1-80)||(36103106-36103185)
chr8 (2-80)||(14244-14321)
chr8 (10-80)||(13404832-13404902)
chr8 (10-68)||(40046874-40046932)
chr8 (1-80)||(515531-515610)
chr8 (10-80)||(3853700-3853770)
chr8 (10-80)||(3858158-3858228)
chr8 (2-80)||(9982642-9982719)
chr8 (10-80)||(37268091-37268161)
chr8 (27-80)||(14991697-14991750)
chr8 (1-65)||(15186816-15186880)
chr8 (28-80)||(31807414-31807465)
chr8 (1-52)||(13144616-13144667)
chr8 (21-79)||(8689138-8689196)
chr8 (1-47)||(26520438-26520484)
chr8 (1-47)||(30444932-30444978)
chr8 (1-47)||(34008819-34008865)
chr8 (1-55)||(38573470-38573524)
chr8 (40-80)||(27322687-27322727)
chr8 (1-80)||(1088276-1088355)
chr8 (37-76)||(32626069-32626108)
chr8 (10-80)||(33902750-33902820)
chr8 (1-68)||(35404741-35404808)
chr8 (50-80)||(26520469-26520499)
chr8 (1-47)||(29611408-29611454)
chr8 (11-52)||(8689207-8689248)
chr8 (1-58)||(21465572-21465629)
chr8 (31-80)||(30435251-30435300)
chr8 (11-47)||(7202885-7202921)
chr8 (3-47)||(42739969-42740013)
[»] chr6 (22 HSPs)
chr6 (1-80)||(9285652-9285731)
chr6 (1-80)||(9763017-9763096)
chr6 (1-80)||(34244969-34245048)
chr6 (10-80)||(6919713-6919783)
chr6 (11-80)||(15299510-15299578)
chr6 (1-65)||(776155-776219)
chr6 (1-80)||(6919783-6919861)
chr6 (1-80)||(13487280-13487359)
chr6 (1-80)||(28918170-28918249)
chr6 (1-80)||(29889423-29889502)
chr6 (1-80)||(1368482-1368561)
chr6 (1-80)||(15832471-15832550)
chr6 (13-67)||(15299417-15299471)
chr6 (3-80)||(6358242-6358319)
chr6 (21-80)||(8574700-8574759)
chr6 (21-80)||(8574760-8574819)
chr6 (10-80)||(9763096-9763166)
chr6 (1-58)||(34364770-34364827)
chr6 (1-58)||(9697489-9697546)
chr6 (21-65)||(776100-776144)
chr6 (45-80)||(33733437-33733472)
chr6 (2-47)||(1195371-1195416)
[»] chr2 (51 HSPs)
chr2 (1-80)||(27033495-27033574)
chr2 (1-80)||(41461590-41461669)
chr2 (10-80)||(14365705-14365775)
chr2 (8-80)||(17180302-17180374)
chr2 (1-80)||(784868-784947)
chr2 (1-80)||(10480124-10480203)
chr2 (1-80)||(11532242-11532321)
chr2 (1-80)||(11793900-11793979)
chr2 (10-80)||(14537204-14537274)
chr2 (1-80)||(769041-769120)
chr2 (1-80)||(1583798-1583877)
chr2 (1-80)||(13017784-13017863)
chr2 (2-80)||(14365777-14365853)
chr2 (1-80)||(33189246-33189325)
chr2 (10-80)||(11716413-11716483)
chr2 (1-77)||(30698289-30698365)
chr2 (1-80)||(11141310-11141389)
chr2 (1-80)||(45094460-45094539)
chr2 (2-80)||(28740601-28740679)
chr2 (28-80)||(11684604-11684656)
chr2 (1-80)||(35047668-35047747)
chr2 (10-80)||(17905659-17905729)
chr2 (1-79)||(40026070-40026148)
chr2 (28-77)||(11716501-11716550)
chr2 (1-58)||(32839637-32839694)
chr2 (1-77)||(3092290-3092366)
chr2 (1-65)||(39630245-39630308)
chr2 (1-80)||(10244182-10244261)
chr2 (3-94)||(30751338-30751428)
chr2 (1-59)||(7167656-7167714)
chr2 (1-79)||(11606719-11606797)
chr2 (2-52)||(14954343-14954393)
chr2 (10-80)||(41461520-41461590)
chr2 (10-80)||(44256191-44256260)
chr2 (10-65)||(784813-784868)
chr2 (1-80)||(7228001-7228080)
chr2 (2-49)||(11607257-11607304)
chr2 (1-47)||(8736430-8736476)
chr2 (1-47)||(14537274-14537320)
chr2 (1-79)||(29279008-29279086)
chr2 (1-45)||(44255674-44255718)
chr2 (2-49)||(11595355-11595402)
chr2 (1-47)||(3345783-3345829)
chr2 (50-80)||(8736461-8736491)
chr2 (1-47)||(11824755-11824801)
chr2 (1-47)||(20935744-20935790)
chr2 (15-80)||(8735849-8735914)
chr2 (10-47)||(11684674-11684711)
chr2 (39-80)||(39477976-39478017)
chr2 (1-65)||(740724-740788)
chr2 (11-59)||(11532169-11532217)
[»] chr7 (49 HSPs)
chr7 (2-80)||(40110742-40110820)
chr7 (1-80)||(5644682-5644761)
chr7 (1-80)||(23455222-23455301)
chr7 (1-80)||(26162112-26162191)
chr7 (1-80)||(29065824-29065903)
chr7 (1-80)||(31632727-31632806)
chr7 (1-80)||(35776930-35777009)
chr7 (1-80)||(28539143-28539222)
chr7 (6-80)||(43955522-43955596)
chr7 (8-80)||(43955596-43955668)
chr7 (1-80)||(6498740-6498819)
chr7 (1-80)||(39342617-39342696)
chr7 (14-80)||(2057400-2057466)
chr7 (1-79)||(21635960-21636038)
chr7 (10-80)||(40110822-40110892)
chr7 (1-80)||(2057470-2057549)
chr7 (1-80)||(9784906-9784985)
chr7 (1-80)||(14603237-14603316)
chr7 (1-80)||(23548586-23548665)
chr7 (1-80)||(25189201-25189280)
chr7 (1-80)||(35455809-35455888)
chr7 (1-83)||(43791094-43791174)
chr7 (14-80)||(34388353-34388419)
chr7 (10-80)||(44915200-44915270)
chr7 (1-55)||(46069421-46069475)
chr7 (15-80)||(5644766-5644831)
chr7 (16-80)||(34398938-34399003)
chr7 (1-80)||(22391562-22391641)
chr7 (1-80)||(29639190-29639269)
chr7 (1-80)||(30629062-30629141)
chr7 (1-80)||(49052860-49052936)
chr7 (10-80)||(29065903-29065973)
chr7 (10-80)||(49052791-49052860)
chr7 (1-80)||(18789221-18789300)
chr7 (1-80)||(34388270-34388349)
chr7 (1-66)||(3905634-3905699)
chr7 (1-65)||(30524275-30524339)
chr7 (10-80)||(40854053-40854124)
chr7 (10-76)||(21635894-21635960)
chr7 (1-47)||(32650611-32650657)
chr7 (1-47)||(40854007-40854053)
chr7 (1-55)||(44915270-44915324)
chr7 (2-58)||(18789544-18789600)
chr7 (28-76)||(22351874-22351922)
chr7 (1-47)||(14790151-14790197)
chr7 (1-47)||(45984378-45984424)
chr7 (1-47)||(45988738-45988784)
chr7 (11-59)||(29639119-29639167)
chr7 (11-59)||(31632828-31632876)
[»] chr3 (57 HSPs)
chr3 (10-80)||(9129428-9129498)
chr3 (10-80)||(9137535-9137605)
chr3 (1-77)||(31070415-31070490)
chr3 (1-80)||(21307520-21307599)
chr3 (9-80)||(46672799-46672870)
chr3 (1-80)||(44436263-44436342)
chr3 (1-80)||(44692827-44692906)
chr3 (5-80)||(49457348-49457423)
chr3 (1-80)||(53129831-53129910)
chr3 (10-80)||(27251978-27252048)
chr3 (10-80)||(44692906-44692976)
chr3 (10-79)||(28092220-28092289)
chr3 (3-80)||(36397979-36398056)
chr3 (1-80)||(5415858-5415937)
chr3 (1-80)||(7302351-7302430)
chr3 (1-80)||(47767437-47767516)
chr3 (1-77)||(19475824-19475900)
chr3 (1-80)||(31189385-31189464)
chr3 (1-80)||(37054399-37054478)
chr3 (1-80)||(42005941-42006020)
chr3 (1-80)||(48947610-48947689)
chr3 (1-80)||(53470417-53470496)
chr3 (1-67)||(30766571-30766637)
chr3 (10-80)||(46429480-46429550)
chr3 (3-80)||(34088576-34088653)
chr3 (1-77)||(671607-671683)
chr3 (1-73)||(7976560-7976632)
chr3 (16-80)||(47284316-47284380)
chr3 (1-80)||(9129349-9129428)
chr3 (1-80)||(9137456-9137535)
chr3 (14-80)||(5415788-5415854)
chr3 (10-80)||(39110399-39110469)
chr3 (31-80)||(35279920-35279969)
chr3 (1-80)||(52527041-52527120)
chr3 (10-80)||(39215922-39215992)
chr3 (10-66)||(31070490-31070546)
chr3 (10-77)||(37321558-37321625)
chr3 (8-55)||(42130774-42130821)
chr3 (10-52)||(44436342-44436384)
chr3 (1-47)||(46429434-46429480)
chr3 (2-47)||(332051-332096)
chr3 (16-80)||(46635862-46635926)
chr3 (1-52)||(8762159-8762210)
chr3 (25-80)||(42130697-42130752)
chr3 (1-61)||(46706674-46706736)
chr3 (1-68)||(50168598-50168665)
chr3 (1-47)||(2104772-2104818)
chr3 (1-51)||(13176550-13176600)
chr3 (1-51)||(13339451-13339501)
chr3 (1-47)||(28092289-28092335)
chr3 (1-47)||(38506864-38506910)
chr3 (1-35)||(39215888-39215922)
chr3 (21-79)||(44288467-44288525)
chr3 (1-43)||(47284268-47284310)
chr3 (10-47)||(332012-332049)
chr3 (1-77)||(30767112-30767189)
chr3 (11-59)||(19475923-19475971)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-80)||(4080-4159)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-80)||(56349-56428)
scaffold0044 (14-55)||(56304-56345)
[»] chr5 (63 HSPs)
chr5 (1-80)||(15374035-15374114)
chr5 (1-80)||(20523208-20523287)
chr5 (1-80)||(22766957-22767036)
chr5 (1-80)||(37722880-37722959)
chr5 (12-80)||(2721557-2721625)
chr5 (5-80)||(3563282-3563357)
chr5 (1-80)||(9764343-9764422)
chr5 (1-80)||(25935276-25935355)
chr5 (1-80)||(40090400-40090479)
chr5 (1-80)||(40643893-40643971)
chr5 (7-80)||(16515099-16515172)
chr5 (1-78)||(37145487-37145564)
chr5 (1-80)||(2316383-2316463)
chr5 (8-80)||(26281262-26281334)
chr5 (1-80)||(927307-927386)
chr5 (1-80)||(9894308-9894387)
chr5 (1-80)||(19533893-19533972)
chr5 (1-80)||(22303856-22303935)
chr5 (1-80)||(32389977-32390056)
chr5 (1-80)||(41762201-41762280)
chr5 (14-80)||(9764426-9764492)
chr5 (10-80)||(15804327-15804397)
chr5 (10-80)||(32390056-32390126)
chr5 (10-65)||(2316463-2316518)
chr5 (1-80)||(32250084-32250162)
chr5 (10-80)||(15373965-15374035)
chr5 (10-80)||(20523138-20523208)
chr5 (8-80)||(16515010-16515081)
chr5 (9-80)||(33245366-33245437)
chr5 (1-80)||(40809416-40809495)
chr5 (30-80)||(28828372-28828422)
chr5 (10-80)||(28828431-28828501)
chr5 (10-80)||(40809346-40809416)
chr5 (30-75)||(13243469-13243514)
chr5 (1-80)||(6634089-6634168)
chr5 (1-80)||(14834829-14834908)
chr5 (1-80)||(20320634-20320713)
chr5 (5-80)||(35379349-35379423)
chr5 (6-68)||(23091979-23092041)
chr5 (10-80)||(23092046-23092116)
chr5 (143-252)||(28101163-28101273)
chr5 (31-80)||(15804399-15804448)
chr5 (10-59)||(32470966-32471015)
chr5 (1-65)||(32470902-32470966)
chr5 (12-80)||(34982221-34982288)
chr5 (25-80)||(6634020-6634075)
chr5 (1-79)||(10314655-10314733)
chr5 (1-47)||(15270840-15270886)
chr5 (1-47)||(17542347-17542393)
chr5 (1-47)||(22305132-22305178)
chr5 (1-47)||(33146211-33146257)
chr5 (1-46)||(28490031-28490076)
chr5 (37-77)||(12991334-12991374)
chr5 (37-80)||(13243515-13243558)
chr5 (1-55)||(35111256-35111310)
chr5 (11-53)||(37241598-37241640)
chr5 (1-46)||(17492634-17492679)
chr5 (168-252)||(26640873-26640958)
chr5 (143-215)||(28103921-28103994)
chr5 (2-43)||(28489505-28489546)
chr5 (11-47)||(2550348-2550384)
chr5 (40-80)||(5658781-5658821)
chr5 (37-77)||(13064957-13064997)
[»] scaffold0048 (1 HSPs)
scaffold0048 (3-85)||(82943-83025)
[»] scaffold1562 (2 HSPs)
scaffold1562 (14-80)||(493-559)
scaffold1562 (1-80)||(410-489)
[»] scaffold1158 (2 HSPs)
scaffold1158 (14-80)||(2034-2100)
scaffold1158 (1-80)||(2104-2183)
[»] scaffold0009 (2 HSPs)
scaffold0009 (6-80)||(42002-42076)
scaffold0009 (28-80)||(42080-42132)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-80)||(4487-4566)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-80)||(5131-5210)
[»] scaffold0129 (2 HSPs)
scaffold0129 (2-80)||(19203-19280)
scaffold0129 (11-80)||(19784-19852)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-66)||(10905-10970)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-80)||(2872-2950)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-80)||(7156-7235)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-80)||(15855-15931)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-80)||(2897-2973)
[»] scaffold0790 (1 HSPs)
scaffold0790 (229-296)||(3448-3515)
[»] scaffold0449 (1 HSPs)
scaffold0449 (83-113)||(4312-4342)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-51)||(130388-130438)


Alignment Details
Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34756511 - 34756429
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactct 83  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34756511 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactct 34756429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8224852 - 8224773
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 8224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15034743 - 15034664
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  15034743 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 15034664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24273209 - 24273288
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 24273288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28632575 - 28632653
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacac 28632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50005163 - 50005084
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  50005163 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacac 50005084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 15034743 - 15034813
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15034743 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 15034813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 23536142 - 23536072
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 23536072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4038150 - 4038229
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  4038150 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 4038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26501068 - 26501147
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 26501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38277498 - 38277420
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||||| |||| |||||||||||||    
T  38277498 aaacaatataattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacac 38277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 45565477 - 45565399
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  45565477 aaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 45565399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 44410392 - 44410319
Alignment:
Q  4 acaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  44410392 acaatagaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaa 44410319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 76  Q
    |||||||| |||||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 4038146 - 4038080
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacac 4038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 27804340 - 27804270
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  27804340 gaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacac 27804270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 30190220 - 30190290
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||| || |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacac 30190290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 37036940 - 37037017
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| ||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacac 37037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28745880 - 28745805
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||| |||||| ||||||||    
T  28745880 caaacaatagaattcaccttaaa-taattgaattccctcaaaccattacattccctcaaaatattcccccatccaaa 28745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6470675 - 6470754
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||| |||||||||| | |||||||| ||||||||||||||||| |||||||||||||  |||||||||||    
T  6470675 caaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacac 6470754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31166394 - 31166315
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| |||||| || ||| ||||  |||||||||||||||  ||||||||||||||||||||||||||    
T  31166394 caaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacac 31166315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44570762 - 44570687
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 76  Q
    |||||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||| | |||||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 47165201 - 47165280
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||| |||||| |||||||| |||||||||||||||| |||||||||||| |  |||||||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacac 47165280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 40264114 - 40264184
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  40264114 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacac 40264184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 43622977 - 43623046
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| || ||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  43622977 aattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacac 43623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27804340 - 27804419
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| || |||||| ||||||||  || |||||||||||| ||||||||||||||  |||||||||||    
T  27804340 caaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacac 27804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 28745880 - 28745951
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacact 81  Q
    |||||||||||||| || |||||||| ||||||| |||||||||||| |||| |||| ||||||||||||||    
T  28745880 gaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacact 28745951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 49659300 - 49659222
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| || ||||| |||  |||||||||||||||||| |||||||| |||||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattccc-catccaaacac 49659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5474474 - 5474528
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  5474474 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 50005163 - 50005233
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| |||||  |||||||||||    
T  50005163 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacac 50005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37447891 - 37447968
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaac 78  Q
    |||||||| ||||||||||||| ||| ||||||||  |||||||||||||||||||| ||| ||||||  ||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 38277504 - 38277568
Alignment:
Q  15 cacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  38277504 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatattccc-catccaaacac 38277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 946997 - 946930
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    |||||||| |||||||||||| |||| |||||||  ||||||| | ||||||||||||||||||||||    
T  946997 caaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacattccc 946930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 32287934 - 32288001
Alignment:
Q  13 ttcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||| ||||  |||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacac 32288001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39887211 - 39887132
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||| |||||||| |||||||   ||||||||| | ||||||| |||||||||||||||| ||||||    
T  39887211 caaacaatggaattcacatcaaagtatttgaatttcttcaaaacatcatattcccttaaaacattccctcatctaaacac 39887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 27935569 - 27935639
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||||||||||| ||| |  |||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacac 27935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 29446828 - 29446767
Alignment:
Q  6 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||||| |||||||||||||    
T  29446828 aatagaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattccc 29446767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32573006 - 32572960
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||    
T  32573006 caaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 32573006 - 32573072
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 76  Q
    |||| |||||||||  |||||||||| |||||||||||||||| |||||||| |||||| |||||||    
T  32573006 gaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 34756511 - 34756581
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||    
T  34756511 gaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaacac 34756581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 37214894 - 37214842
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaac 62  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  37214894 gaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 946458 - 946381
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| | ||||||| || ||||| ||||||||| |||||||||||||| ||||  |||||||||||||    
T  946458 caaacaatagaattcatc-caaagtatttaaattccctcaaaacaatacattccctcaaagcatt-tctcatccaaacac 946381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15245526 - 15245480
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  15245526 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31195540 - 31195474
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 67  Q
    |||||||| |||||||||||||| || || ||||  |||| |||||||||||||||||||| |||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcc 31195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40264114 - 40264068
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||    
T  40264114 caaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15467952 - 15468009
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| ||||||||||||    
T  15467952 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 25889232 - 25889169
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatcc 74  Q
    |||| ||||||||| |||||||||||  ||||||||||| ||| |||||||| ||||||||||||    
T  25889232 gaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcc 25889169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10166583 - 10166504
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  ||||||||| ||  || |||| |||  ||||||||||||||| || |||||||||| |||||||||||||    
T  10166583 caaacaatgaaattcacctaaatatatttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacac 10166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34003461 - 34003382
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||| ||||||||||||||||| |||||| | ||||||| |||| ||| | | |||| |||| |||||||||||||    
T  34003461 caaataatggaattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacac 34003382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44410410 - 44410465
Alignment:
Q  25 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||| |||||||| ||||||| |||||||| ||||||  ||||||||||    
T  44410410 taattgaattccctcaaaactttacattacctcaaaatattccccaatccaaacac 44410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51847935 - 51847857
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| || |||||||||| |||||| |||||||   | ||||||||||||| ||||||||||||||  |||||||||||    
T  51847935 caaacgatggaattcacct-aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaacac 51847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23536142 - 23536188
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  23536142 caaacaatataattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27935569 - 27935523
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||||| |||||| |||||||  |||||||||||    
T  27935569 caaacaatagaattcacctgaaagtagttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32647385 - 32647319
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 67  Q
    |||||||| | ||||||| ||||||| |||||||  ||||||||| |||||| | ||||||||||||    
T  32647385 caaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcc 32647319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37214894 - 37214939
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||    
T  37214894 caaacaatagaattcacctc-aagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37447348 - 37447394
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  37447348 caaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44571285 - 44571239
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  44571285 caaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47541977 - 47542031
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    ||||||||  |||||||||||||||| || ||||| |||| ||||||||||||||    
T  47541977 caaacaatgaaattcacctcaaagtatttaaattctctcataacattacattccc 47542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 45565479 - 45565515
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||| |||||||| |||||||||||    
T  45565479 aattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15660258 - 15660337
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15660258 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 15660337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31473933 - 31473854
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31473854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36455991 - 36455912
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  36455991 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacac 36455912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10128049 - 10128125
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  10128049 caaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaa 10128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28845955 - 28845875
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacact 81  Q
    ||||||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||  ||||||||||||    
T  28845955 caaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacact 28845875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7352896 - 7352817
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| ||| || ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  7352896 caaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacac 7352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10633116 - 10633037
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 10633037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 49111396 - 49111466
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49111466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1539725 - 1539649
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42844627 - 42844555
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatc 73  Q
    |||||||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||| ||||    
T  42844627 caaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatc 42844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2125941 - 2125862
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||| |||||| |||||||||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacac 2125862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 857323 - 857393
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  857323 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 857393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 4896716 - 4896786
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| || |||||||||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 4896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 1112679 - 1112610
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||| |||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacac 1112610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1107127 - 1107203
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||||||||||||| | |||| |||||||| |||||||||||| |||||||||||| |||||| ||||||||    
T  1107127 caaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaa 1107203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 11041040 - 11040973
Alignment:
Q  12 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattccc-catccaaacac 11040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 2299394 - 2299505
Alignment:
Q  199 ggttgttcttctagcctttgttgcgtttcagttttgcgttggagtaatctggtttggttcacctcagctgtagcaagttttcgtgcaattttgcttctat 298  Q
    |||||||| ||| |||||||| ||| |||| |||| | ||||||||||||||||| ||||  ||||||||||||| | |||| ||||| ||||||||| |    
T  2299394 ggttgttcatctggcctttgtcgcgcttcactttttctttggagtaatctggtttagttccgctcagctgtagcaggctttcatgcaactttgcttctgt 2299493  T
Q  299 tgtgtggtgttt 310  Q
    |||| |||||||    
T  2299494 tgtgcggtgttt 2299505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 7352896 - 7352966
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||  |||||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  7352896 gaattcaattcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 7352966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 14982359 - 14982285
Alignment:
Q  6 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  14982359 aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 14982285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 26250984 - 26250914
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||    
T  26250984 gaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacac 26250914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 28845955 - 28846025
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||| || |||||||||||    
T  28845955 gaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacac 28846025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 857323 - 857266
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  857323 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 36456007 - 36456080
Alignment:
Q  7 atagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||| |||||||  ||||||| |||||||||||||||||||||||  |||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacac 36456080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 41498575 - 41498644
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||  |||||||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacac 41498644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35470206 - 35470142
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  35470206 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatt 35470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 1112704 - 1112775
Alignment:
Q  8 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||  |||||||||| ||| ||||||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaaca 1112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 4896716 - 4896653
Alignment:
Q  17 cctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  4896716 cctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacac 4896653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16516255 - 16516176
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| || ||||| |||||||| || |||||  ||||||||||||||||| ||||||||||||| |||||||||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacac 16516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 5715815 - 5715749
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| |||||||| |||||||  ||||||||||||||||  ||||||||||||||||||||||||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacac 5715749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 11348327 - 11348388
Alignment:
Q  16 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaa 11348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4441394 - 4441342
Alignment:
Q  28 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacac 4441342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41139557 - 41139498
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaa 60  Q
    ||||||||||||||||||| |||||| |||||||  |||||||||||||||| |||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaa 41139498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9451121 - 9451199
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    ||||||||| |||| | || |||||| ||||| || |||||||||||||||| ||| |||||||||| |||||||||||    
T  9451121 caaacaataaaatttagctaaaagtatttgaactctctcaaaacattacattaccttaaaacattccttcatccaaaca 9451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 10128049 - 10127979
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| |||||||||||  ||||||||||||||| | |||||| |||||| |||||||||||    
T  10128049 gaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacac 10127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 15660250 - 15660188
Alignment:
Q  18 ctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| ||||||||||| |||||||||||||||| |||||||| ||||||  ||||||||||    
T  15660250 ctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacac 15660188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26534577 - 26534523
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 55266852 - 55266929
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||| |||||||| ||||||| |||| ||| |||||||||||||   |||||||||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacac 55266929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19461725 - 19461801
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||||||||| |  ||||| || ||||||||||||||||||||||||| | |||||| ||| || ||||||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 1107127 - 1107056
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccc-tcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| ||||||||  |||||||||||||||||| | |||| ||| ||||||||||||||    
T  1107127 gaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacac 1107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattc 53  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 31742875 - 31742918
Alignment:
Q  37 ctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  31742875 ctcaaaacattacattccctcaaaacattcctccatccaaacac 31742918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 41498573 - 41498494
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctc-aaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||| |||||  |||||||| ||| |||||||||  ||| ||||||||| |||| |||||||||||    
T  41498573 aaacaatagaattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacac 41498494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 46242533 - 46242612
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| ||  ||||  ||||||||||| ||| ||||||||||||  |||||| ||||||    
T  46242533 caaacaatggaattcacctcaaagtattttgattccttcaaaacattatatttcctcaaaacattgtctcatcaaaacac 46242612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 467887 - 467955
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||  |||||||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  467887 gaattcacttcaaagtggttgaattc-ctcaaaacattacattccatcaaaacattctc-catccaaacac 467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26250984 - 26251030
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||    
T  26250984 caaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 42542979 - 42543021
Alignment:
Q  38 tcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacac 42543021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 42844627 - 42844697
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||| ||||| ||||||| ||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  42844627 gaatccacttcaaaataattgatttccctcaaaacattacattacctcaaaatatttccccatccaaacac 42844697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 31742845 - 31742781
Alignment:
Q  16 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||| |||||||||||||| | ||| |||| |||||  |||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacac 31742781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42776721 - 42776642
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  ||||||||| |||||| |||||||  |||||||||||||||  ||| |||||||||   |||||||||||    
T  42776721 caaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacac 42776642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11041042 - 11041088
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||||  |||||| |||||||| |||||||||||    
T  11041042 caaacaatagaattcaccataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12169102 - 12169037
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 67  Q
    ||||||| ||||||||| | ||| || |||||||  ||||||||||||| |||||||||||||||||    
T  12169102 caaacaacagaattcactttaaaatagttgaattt-ctcaaaacattactttccctcaaaacattcc 12169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 47108353 - 47108323
Alignment:
Q  50 attccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||||||||    
T  47108353 attccctcaaaacattccctcatccaaacac 47108323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 53760779 - 53760825
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||| ||||| || |||||||| |||||||||||    
T  53760779 caaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 10354418 - 10354361
Alignment:
Q  9 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 66  Q
    |||||||||||| || || || ||||  |||||||||||||||| |||||||||||||    
T  10354418 agaattcacctccaaatatttcaattttctcaaaacattacattacctcaaaacattc 10354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31947675 - 31947596
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattaca---ttccctcaaaacattccctcatccaaaca 79  Q
    |||||||| ||||||||||||  ||| |||||||| |||  |||||||||   |||||||||||||||| | ||||||||||    
T  31947675 caaacaatggaattcacctca--gtatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaaca 31947596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3853700 - 3853621
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  3853700 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 3853621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3858158 - 3858079
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  3858158 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 3858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24045044 - 24044965
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacac 24044965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17110944 - 17111023
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||| |  |||||||||||    
T  17110944 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacac 17111023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4156242 - 4156321
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||| |||| | |||||||||||    
T  4156242 caaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacac 4156321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13404902 - 13404969
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    ||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  13404902 caaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccc 13404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23011818 - 23011739
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| | | |||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacac 23011739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29257350 - 29257429
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  29257350 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 29257429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29482806 - 29482885
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||||| |||||||||||    
T  29482806 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacac 29482885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33377296 - 33377375
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| || ||||||||||||||||||| |||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacac 33377375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 33902748 - 33902672
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  33902748 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 33902672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44346677 - 44346756
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  44346677 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 44346756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44889438 - 44889359
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacac 44889359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 17110944 - 17110874
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  17110944 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 17110874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 42711364 - 42711434
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacac 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14800035 - 14800114
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| |||||||||  ||||| |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  14800035 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 14800114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35979003 - 35979082
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||  || |||||||||||||||||||||||  |||||||||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacac 35979082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 33986087 - 33986009
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||  |||||||||||||||| |||||||| |||||||||||||||| | |||| |||||||| |||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacac 33986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 40046877 - 40046809
Alignment:
Q  12 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||   |||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacac 40046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8049338 - 8049271
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    ||||||||  |||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccc 8049271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11744718 - 11744797
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| ||| || ||||||||  ||| |||||||||||||||| ||| |||| |||||||||||||    
T  11744718 caaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacac 11744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28324661 - 28324740
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||| ||||| ||| ||||||||  ||||||||||||||||||||||||||||||  |||||||||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacac 28324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36103185 - 36103106
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  ||||||| |||||||| |||||||  || ||||||||||||||||||||||||||||  |||||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 36103106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 14321 - 14244
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||  |||||||| ||||||| |||||||| || |||||||||||||||||| |||||||||| |||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacattccc-catccaaacac 14244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 13404902 - 13404832
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  13404902 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 13404832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 40046874 - 40046932
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  40046874 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 515531 - 515610
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  ||||||| |||||||| ||||| || || ||||||||||||||| ||||||||||||  |||||||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacac 515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 3853700 - 3853770
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| ||| |||||||||||| |||||||| ||| || |||||||||||    
T  3853700 gaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacac 3853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 3858158 - 3858228
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| ||| |||||||||||| |||||||| ||| || |||||||||||    
T  3858158 gaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacac 3858228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 9982719 - 9982642
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| |||||||||||||| || || ||||| |||||||||||||||| ||| ||||||||| | |||||||||||    
T  9982719 aaacaatggaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaacattctc-catccaaacac 9982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 37268091 - 37268161
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||| |||||||| ||||||  ||||||||||    
T  37268091 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacac 37268161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 14991750 - 14991697
Alignment:
Q  27 attgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||||||| ||||||||||||||| |||||||||||    
T  14991750 attgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacac 14991697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15186816 - 15186880
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||||||||||||||| ||| || |||||||  ||||||||||||||||  |||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacattatctcaaaacatt 15186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 31807465 - 31807414
Alignment:
Q  28 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  31807465 ttgaattccctcaaaacattacattcc-tcaaaacattctctcatccaaacac 31807414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 52  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 8689196 - 8689138
Alignment:
Q  21 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| |  ||||||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38573470 - 38573524
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    |||||||||||||||| ||||||||| |||||||  ||||||||| |||||||||    
T  38573470 caaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattccc 38573524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 27322687 - 27322727
Alignment:
Q  40 aaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacac 27322727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1088276 - 1088355
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||| ||| |||| || |||||||  ||||||||| ||||||| |||||||||||||  || ||||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacac 1088355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 32626069 - 32626108
Alignment:
Q  37 ctcaaaacattacattccctcaaaacattccctcatccaa 76  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaa 32626108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 33902750 - 33902820
Alignment:
Q  10 gaattcacctcaaagtaatt-gaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| || |||||| |||||||||  |||||||||| |||||||||| ||||| |||||    
T  33902750 gaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacac 33902820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35404741 - 35404808
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    |||||| || |||||||||||||||| |||||||  ||||||| |||||||| ||||  |||||||||    
T  35404741 caaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacattacctcgtaacattccc 35404808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 26520469 - 26520499
Alignment:
Q  50 attccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||||||||    
T  26520469 attccctcaaaacattccctcatccaaacac 26520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29611454 - 29611408
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 8689207 - 8689248
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacatt 52  Q
    |||||| || ||||||||||||||| ||||||||||||||||    
T  8689207 aattcaacttaaagtaattgaattccctcaaaacattacatt 8689248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21465572 - 21465629
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    |||||||| ||||| ||||||||||| |||||||| |||  || ||||||||||||||    
T  21465572 caaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattccctca 21465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 30435300 - 30435251
Alignment:
Q  31 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| ||| ||||||||||||||||||||||||| |  |||||||||||    
T  30435300 aattccctccaaacattacattccctcaaaacatttctccatccaaacac 30435251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||| |||||||| |||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 42740013 - 42739969
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||| |||||| ||||||||| |||||||| |||||||||||    
T  42740013 aacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9285731 - 9285652
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  9285731 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 9285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9763096 - 9763017
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || | |||||||||    
T  9763096 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacac 9763017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34244969 - 34245048
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 34245048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 6919783 - 6919713
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacac 6919713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 15299510 - 15299578
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattccc-catccaaacac 15299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 776155 - 776219
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||    
T  776155 caaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacatt 776219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6919783 - 6919861
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| ||| |  |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  6919783 caaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacac 6919861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13487359 - 13487280
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||| |||| ||||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacac 13487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28918249 - 28918170
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||||||| |||||||  || ||||||||||||||||||||||||||||  |||||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 28918170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29889423 - 29889502
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||| |||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||  |||||||||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacac 29889502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1368561 - 1368482
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||  | |||||||| || |||| ||||||||| |||||||||||||  |||||||||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacac 1368482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15832550 - 15832471
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||| ||||||| |||||||| || ||||||||||||||| || ||||||| ||||||||||||||    
T  15832550 caaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacac 15832471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 15299471 - 15299417
Alignment:
Q  13 ttcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 67  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcc 15299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 6358242 - 6358319
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| ||||||| || ||||| |||||||||||||||| ||||||||||  | |||||| ||||||    
T  6358242 aacaatagaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaacacgctctcatctaaacac 6358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 8574759 - 8574700
Alignment:
Q  21 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 8574760 - 8574819
Alignment:
Q  21 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 9763096 - 9763166
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||| | ||||||||||| |||||||||||||||| |||||||| |||||  |||||||||||    
T  9763096 gaatccacctcacaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacac 9763166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34364827 - 34364770
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    |||||||| ||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9697546 - 9697489
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    |||||||| |||||||| |||||||| ||||||||  ||||||||| |||||||||||    
T  9697546 caaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattccctca 9697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 776144 - 776100
Alignment:
Q  21 aaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    |||||| |||||||  |||||||||||||||||||||||||||||    
T  776144 aaagtagttgaatttcctcaaaacattacattccctcaaaacatt 776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 33733472 - 33733437
Alignment:
Q  45 attacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||| |||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacac 33733437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||| ||||||||||||||||| ||||| || |||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

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Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27033574 - 27033495
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  27033574 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 27033495  T

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Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41461590 - 41461669
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  41461590 caaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 41461669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 14365775 - 14365705
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 14365705  T

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Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 17180374 - 17180302
Alignment:
Q  8 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 17180302  T

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Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 784868 - 784947
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||| |||||| |||||||||||    
T  784868 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacac 784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10480203 - 10480124
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||||||||||||||||||||||| |||||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacac 10480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11532242 - 11532321
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||| |||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacac 11532321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11793979 - 11793900
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||| |||||| |||||||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacac 11793900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 14537274 - 14537204
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  14537274 gaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacac 14537204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 769120 - 769041
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  769120 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 769041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1583798 - 1583877
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  1583798 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 1583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13017863 - 13017784
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| || |||| ||||||||||||||||||||| || |||||||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacac 13017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 14365777 - 14365853
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  14365777 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 14365853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33189246 - 33189325
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  33189246 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 33189325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 11716483 - 11716413
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||   |||||||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacac 11716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11141389 - 11141310
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  11141389 caaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 11141310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45094460 - 45094539
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||| | |||||| || ||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacac 45094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 28740679 - 28740601
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacac 28740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 11684656 - 11684604
Alignment:
Q  28 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 11684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35047668 - 35047747
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| | ||||||||| ||||||| |||||||| || |||||| |||||| ||||||||||||||| |||||||||||    
T  35047668 caaacattggaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacac 35047747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 17905729 - 17905659
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||| || ||||||||  | |||||||||||||| |||||||||||||||||||| |||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacac 17905659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40026148 - 40026070
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    |||||||||||||||||||||||||| || ||||  |||||||||||| ||| |||||||| |||||| ||| ||||||    
T  40026148 caaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  28 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3092366 - 3092290
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||| ||||| ||| ||||||| |||||||  ||||||||| |||||||||||||||||||||  ||||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaa 3092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39630308 - 39630245
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatt 39630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10244261 - 10244182
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| |||||||||  ||||| |||||||| ||||||||||||| |||||||| || |||| | |||||||||||    
T  10244261 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacac 10244182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 30751338 - 30751428
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactctgagggattttt 94  Q
    |||||||||||||| || ||| || || ||||| ||||||||||||||||  |||||||||||| ||||||||||||| || | ||||||||    
T  30751338 aacaatagaattcatcttaaa-tatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactcatggattttt 30751428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 59  Q
    ||||||||  |||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11606797 - 11606719
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    ||||||||  |||||||||||||||| ||| ||||  | |||| |||||||||| ||||||||||||||||||| ||||    
T  11606797 caaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattccttcaaaacattccctcatcctaaca 11606719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 14954343 - 14954393
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 52  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 41461590 - 41461520
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  41461590 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 41461520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 44256191 - 44256260
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||| |||| |||||| |||||||||||||||| |||| ||| |||||| |||||||||||    
T  44256191 gaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacac 44256260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 784868 - 784813
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||| ||||||||| || |||||  ||||||||||||||||||||||||||||    
T  784868 gaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatt 784813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7228001 - 7228080
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||| ||||||| ||| || |||||  |||||||||||||||| ||||||||||| || |||||||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacac 7228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 49  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14537274 - 14537320
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  14537274 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29279008 - 29279086
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    |||||||||||||| | |  || ||| |||||||  ||| |||||||||||| |||||||||||||| |||||||||||    
T  29279008 caaacaatagaatttagcaaaatgtatttgaattatctcgaaacattacattacctcaaaacattccttcatccaaaca 29279086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaaca 45  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 49  Q
    ||||||| |||||||||||||| || |||||||| |||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3345829 - 3345783
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||| |||| |||||| |||||||| |||||||||||    
T  3345829 caaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 8736461 - 8736491
Alignment:
Q  50 attccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||||||||    
T  8736461 attccctcaaaacattccctcatccaaacac 8736491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11824755 - 11824801
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  11824755 caaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20935790 - 20935744
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  20935790 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 8735914 - 8735849
Alignment:
Q  15 cacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||| |||||||| |||  ||||||| |||||||||||||||   | |||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacac 8735849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 39477976 - 39478017
Alignment:
Q  39 caaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||| ||||||||||||| | |||||||||||    
T  39477976 caaaacattacattacctcaaaacattctcacatccaaacac 39478017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 740788 - 740724
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||||| |||||||||||||  |  ||||||| | ||||||||||||||  |||||||||||    
T  740788 caaacaataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaacatt 740724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 11532169 - 11532217
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 59  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 11532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 40110820 - 40110742
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  40110820 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 40110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5644761 - 5644682
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  5644761 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 5644682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23455222 - 23455301
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23455222 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacac 23455301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26162112 - 26162191
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 26162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29065903 - 29065824
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||   |||||||||||    
T  29065903 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacac 29065824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31632806 - 31632727
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31632806 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31632727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35776930 - 35777009
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacac 35777009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28539143 - 28539222
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  28539143 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacac 28539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 43955596 - 43955522
Alignment:
Q  6 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  43955596 aatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 43955522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 43955596 - 43955668
Alignment:
Q  8 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  43955596 tagaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 43955668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6498740 - 6498819
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 6498819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39342617 - 39342696
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  39342617 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 39342696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 2057466 - 2057400
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacac 2057400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21635960 - 21636038
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    |||||||||||||||| ||||||||| || |||||  |||||||||||||||||||||||||||| || ||||||||||    
T  21635960 caaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 40110822 - 40110892
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| || |||||||||||    
T  40110822 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacac 40110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2057470 - 2057549
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| |||||||||  ||||| |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  2057470 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 2057549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9784906 - 9784985
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| || |||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||  |||||||||||    
T  9784906 caaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacac 9784985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14603237 - 14603316
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||| ||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  14603237 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 14603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23548586 - 23548665
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||  ||||||||| |||||||||||||||||||||  |||||||||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacac 23548665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25189201 - 25189280
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  ||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||||||| |||||||||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacac 25189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35455888 - 35455809
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||| ||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  35455888 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 35455809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43791174 - 43791094
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactct 83  Q
    |||||||| || |||||||||||||| |||||||| |||||||||||||||||||||  ||| || |||||||||||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctc--aacttttcctcatccaaacactct 43791094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 34388353 - 34388419
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacac 34388419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 44915270 - 44915200
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||| |||| |||||||||||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacac 44915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46069475 - 46069421
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  46069475 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 5644766 - 5644831
Alignment:
Q  15 cacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||||    
T  5644766 cacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacac 5644831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 34398938 - 34399003
Alignment:
Q  16 acctcaaagtaattgaattcgc-tcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacac 34399003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22391562 - 22391641
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  ||||||||||||| || || ||||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  22391562 caaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacac 22391641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29639190 - 29639269
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||| || |||||||  |||| ||||||||||||||| ||||||||||| |||||| ||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacac 29639269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30629141 - 30629062
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||| ||||||| || ||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  30629141 caaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacac 30629062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 49052860 - 49052936
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||| |||||||||| |||||||||||    
T  49052860 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt-cctc-aaacattccc-catccaaacac 49052936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 29065903 - 29065973
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||  |||||||||||    
T  29065903 gaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacac 29065973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 49052860 - 49052791
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  49052860 gaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacac 49052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18789221 - 18789300
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||| |||||| |||||||| |||| ||||||| |||| ||||||| |||||  |||||||||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacac 18789300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34388349 - 34388270
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||| |||||| |||||||| |||| |||||||| || |||||||| ||| || |||||||||||    
T  34388349 caaacaatggaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacac 34388270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3905634 - 3905699
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 66  Q
    |||||||||||||||||||||||||| ||||||||  | |||||||||  || |||||||||||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaattccttgaaaacattatttttcctcaaaacattc 3905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30524339 - 30524275
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||||  |||||| | ||||||| |||||||| |||||||||||||||||| ||||||||||    
T  30524339 caaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacatt 30524275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 40854053 - 40854124
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgc-tcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| | |||||| |||||||||||||| |||||| || |||||||||||    
T  40854053 gaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacac 40854124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 21635960 - 21635894
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 76  Q
    |||| ||||||||| ||||||||| | |||||||||||||||| |||||||| |||| | |||||||    
T  21635960 gaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaa 21635894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40854053 - 40854007
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  40854053 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44915270 - 44915324
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    ||||||||||||||||||| | |||| |||||||| |||||||||||| ||||||    
T  44915270 caaacaatagaattcaccttagagtagttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 58  Q
    ||||||| ||||||||||||||||| |||||||| |||  |||||||||||| ||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  28 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 76  Q
    |||||||| |||||||||||||||| || |||||||||||| |||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14790197 - 14790151
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||| |||| |||||||||||||||| |||||||| |||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45984424 - 45984378
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  45984424 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45988784 - 45988738
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  45988784 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 29639119 - 29639167
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 59  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  29639119 aatttacctcaaagtatttgaattctctcataacattacatttcctcaa 29639167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 31632876 - 31632828
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 59  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  31632876 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 31632828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 9129428 - 9129498
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9129428 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 9129498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 9137535 - 9137605
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9137535 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 9137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31070490 - 31070415
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  31070490 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccc-catccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21307520 - 21307599
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacac 21307599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 46672799 - 46672870
Alignment:
Q  9 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 46672870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44436342 - 44436263
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| ||| || |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  44436342 caaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 44436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44692906 - 44692827
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||  |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  44692906 caaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacac 44692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 49457423 - 49457348
Alignment:
Q  5 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49457348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 53129831 - 53129910
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacac 53129910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 27251978 - 27252048
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacac 27252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 44692906 - 44692976
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  44692906 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 44692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 28092289 - 28092220
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||    
T  28092289 gaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 36397979 - 36398056
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  36397979 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacac 36398056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5415858 - 5415937
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| ||||||||  |||||||||||| ||||||||||| |||||| |||||||||||    
T  5415858 caaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacac 5415937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7302430 - 7302351
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||| |||  |||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacac 7302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47767516 - 47767437
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 47767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||  ||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31189385 - 31189464
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| ||| |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||| |||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacac 31189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37054478 - 37054399
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacac 37054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42005941 - 42006020
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||| ||| || |||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 42006020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48947689 - 48947610
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||   |||||||||||    
T  48947689 caaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacac 48947610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 53470417 - 53470496
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||| ||||||| |||||||| ||||||||| || |||||||||||||||| ||||||||||||||    
T  53470417 caaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacac 53470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 67  Q
    |||||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 46429480 - 46429550
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| |||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||    
T  46429480 gaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacac 46429550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 34088653 - 34088576
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||| |  |||||||||||    
T  34088653 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacac 34088576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 671607 - 671683
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||| ||||||||| |||||||  ||||||| ||||||||| ||||||||||||||||||||||  |||||||    
T  671607 caaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaa 671683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7976632 - 7976560
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatc 73  Q
    |||||||||||||||||||||| ||| || |||||  ||||||||||||||||| ||||||||||| ||||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattctctcatc 7976560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 47284316 - 47284380
Alignment:
Q  16 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||    
T  47284316 acctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacac 47284380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9129428 - 9129349
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| || |||||| ||||||||  |||||||||||||||||||||||| | || | |||||||||||    
T  9129428 caaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacac 9129349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9137535 - 9137456
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| || |||||| ||||||||  |||||||||||||||||||||||| | || | |||||||||||    
T  9137535 caaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacac 9137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 5415854 - 5415788
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||  ||||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacac 5415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 39110469 - 39110399
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| | ||||||||||||||| ||||||||||| | ||||||||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacac 39110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 35279920 - 35279969
Alignment:
Q  31 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacac 35279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 52527120 - 52527041
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||| ||||||||||| ||||||||   || |||||||||| || ||||||||||||| |||||||||||    
T  52527120 caaacaatggaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacac 52527041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 39215922 - 39215992
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||  |||||||||||| ||| |||||||| |||| |||||||||||||    
T  39215922 gaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattctctcatccaaacac 39215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 31070490 - 31070546
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 66  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| ||||    
T  31070490 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 37321625 - 37321558
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||||| |||||| |||||||  ||||||||||||| || |||||||| |||||| ||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaa 37321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 42130774 - 42130821
Alignment:
Q  8 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||    
T  42130774 tagaattcacctcaaagtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 44436342 - 44436384
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacatt 52  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  44436342 gaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46429480 - 46429434
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  46429480 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 332051 - 332096
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||    
T  332051 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 46635926 - 46635862
Alignment:
Q  16 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| |||||| |||||||  ||||||||||||||||  |||||||||||  |||||||||||||    
T  46635926 acctaaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacac 46635862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8762210 - 8762159
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 52  Q
    |||||||| |||||||| |||||||| |||||||| |||| |||||||||||    
T  8762210 caaacaatggaattcacatcaaagtatttgaattccctcataacattacatt 8762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 42130752 - 42130697
Alignment:
Q  25 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||| |||||||||||||||  |||||||| |||||| || ||||||||    
T  42130752 taattgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacac 42130697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46706736 - 46706674
Alignment:
Q  1 caaacaatagaattcacctcaaagtaatt--gaattcgctcaaaacattacattccctcaaaa 61  Q
    |||||||| ||||||||||||||||| ||  |||||| ||| |||||||||||||| ||||||    
T  46706736 caaacaatggaattcacctcaaagtatttaagaattctctcgaaacattacattccttcaaaa 46706674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50168598 - 50168665
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    |||||||| ||||||| || ||| || |||| ||  |||||||||||||||| |||||||||||||||    
T  50168598 caaacaatggaattcagctaaaattatttgagtttcctcaaaacattacattacctcaaaacattccc 50168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2104818 - 2104772
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||||    
T  2104818 caaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13176550 - 13176600
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 51  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13176550 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 13176600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13339451 - 13339501
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 51  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13339451 caaacaatagaatccacctaaaagtctttgaattctctcaaaacattacat 13339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28092289 - 28092335
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||||||||||  | |||||||| |||||||||||    
T  28092289 caaacaatagaattcacctcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38506864 - 38506910
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| |||||||||||||| || |||||||| |||||||||||    
T  38506864 caaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39215922 - 39215888
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattc 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  39215922 caaacaataaaattcacctcaaagtaattgaattc 39215888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  21 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    |||||| ||||||||  ||||||||||| ||| ||||||||||||||  ||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47284310 - 47284268
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaa 43  Q
    ||||||||||||||||||||||||||  ||||||| |||||||    
T  47284310 caaacaatagaattcacctcaaagtagctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30767189 - 30767112
Alignment:
Q  1 caaacaatagaattcacctca-aagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    |||||||| ||||||||||   ||||| ||||||||  ||| ||||||| |||||||||||||||| || ||||||||    
T  30767189 caaacaatggaattcaccttttaagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 19475971 - 19475923
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 59  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  19475971 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 19475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4159 - 4080
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacac 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 56349 - 56428
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  56349 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacac 56428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 56345 - 56304
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15374035 - 15374114
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| | |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15374035 caaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 15374114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20523208 - 20523287
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  20523208 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 20523287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22767036 - 22766957
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacac 22766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37722880 - 37722959
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacac 37722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 2721557 - 2721625
Alignment:
Q  12 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2721625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 3563357 - 3563282
Alignment:
Q  5 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  3563357 caatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacac 3563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9764422 - 9764343
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  9764422 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 9764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25935276 - 25935355
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||| |||||||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacac 25935355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40090400 - 40090479
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacac 40090479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40643893 - 40643971
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  40643893 caaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 40643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 16515099 - 16515172
Alignment:
Q  7 atagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacac 16515172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37145487 - 37145564
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaac 78  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2316463 - 2316383
Alignment:
Q  1 caaacaatagaattcacctc-aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||  |||||| |||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  2316463 caaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacac 2316383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 26281262 - 26281334
Alignment:
Q  8 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacac 26281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 927386 - 927307
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||| || |||||||||||    
T  927386 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacac 927307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9894308 - 9894387
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||||||||| |||||||| ||   ||||||||||||||||||||||||||| |||||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacac 9894387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19533893 - 19533972
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacac 19533972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22303856 - 22303935
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 22303935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32390056 - 32389977
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| |||||||||||||| | |||| |||||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  32390056 caaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacac 32389977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41762201 - 41762280
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 41762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 9764426 - 9764492
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacac 9764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 15804397 - 15804327
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacac 15804327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 32390056 - 32390126
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| || ||||||||||    
T  32390056 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacac 32390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 2316463 - 2316518
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt 2316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32250084 - 32250162
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||| ||||| ||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacattccc-catccaaacac 32250162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 15374035 - 15373965
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||   |||||||||||    
T  15374035 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacac 15373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 20523208 - 20523138
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| |||||||| |||| || |||||||||||||||||||||| | |||||||||||    
T  20523208 gaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacac 20523138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 16515081 - 16515010
Alignment:
Q  8 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||| | |||||||||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattctc-catccaaacac 16515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 33245366 - 33245437
Alignment:
Q  9 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| || |||||| |||||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacac 33245437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40809416 - 40809495
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||| ||||||||| ||||||  ||||||| ||||||||||||||||| ||||||||||| || |||| ||||||    
T  40809416 caaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacac 40809495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 28828422 - 28828372
Alignment:
Q  30 gaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 28828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 28828431 - 28828501
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 28828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 40809416 - 40809346
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| ||||||||| |||||||| |||||||||||| |||| ||||||||||| || |||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacac 40809346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 13243514 - 13243469
Alignment:
Q  30 gaattcgctcaaaacattacattccctcaaaacattccctcatcca 75  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatcca 13243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6634089 - 6634168
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| ||||| ||  | |||| ||||||||||||| |||  ||||| |||||||||||    
T  6634089 caaacaatagaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacac 6634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14834908 - 14834829
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||  |||||||||||||||| ||| |||| || |||||||||||||||||| |||||||| | ||| |||||||    
T  14834908 caaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacac 14834829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20320634 - 20320713
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||  ||||||| |||||||| || |||| |||||||||| |||||||||||  ||||||||||||    
T  20320634 caaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacac 20320713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 35379423 - 35379349
Alignment:
Q  5 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| ||||||| |||||| | |||||||| ||||||||||||||||  |||||||||||||| |||||||||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacattccc-catccaaacac 35379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 23092041 - 23091979
Alignment:
Q  6 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 68  Q
    ||||||||||| || |||||| ||||||||  |||||||||||||||||||||||| ||||||    
T  23092041 aatagaattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaatattccc 23091979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 23092046 - 23092116
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| || |||||| ||||| || |||||||||||||||||  ||||||||||||| |||||||||||    
T  23092046 gaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacac 23092116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 28101163 - 28101273
Alignment:
Q  143 agttctttgtggcttttagcgttgtt-cagaattgtgaggtgcagcggctgctactcggttgttcttctagcctttgttgcgtttcagttttgcgttgga 241  Q
    |||||| ||||| |||||||| |||| || ||||||||||| | | ||||||| || ||||||||||||||||  ||||| ||||| |||||||  | ||    
T  28101163 agttctatgtggtttttagcgatgtttcaaaattgtgaggtacggaggctgctgcttggttgttcttctagcccatgttgtgtttctgttttgctctaga 28101262  T
Q  242 gtaatctggtt 252  Q
    |||||||||||    
T  28101263 gtaatctggtt 28101273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 15804399 - 15804448
Alignment:
Q  31 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacac 15804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 32470966 - 32471015
Alignment:
Q  10 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 59  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  32470966 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaa 32471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32470966 - 32470902
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 65  Q
    |||| ||||||||| |||| ||| || ||||||||  ||||||||||||||||||||||||||||    
T  32470966 caaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaacatt 32470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 34982288 - 34982221
Alignment:
Q  12 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||  |||||||| |||||||||| |||||||||||||||||||||  ||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacac 34982221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 6634075 - 6634020
Alignment:
Q  25 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||| |||||||||||||||| |||||||| || ||| |||||||||||    
T  6634075 taattgaattccctcaaaacattacattacctcaaaatatccccccatccaaacac 6634020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10314733 - 10314655
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 79  Q
    ||||||||||||||||| ||||| || |||||||| || |||| |||||||| | |||||||||| |  ||||||||||    
T  10314733 caaacaatagaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaaca 10314655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15270840 - 15270886
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  15270840 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17542347 - 17542393
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  17542347 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacat 46  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 12991334 - 12991374
Alignment:
Q  37 ctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  12991334 ctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 13243515 - 13243558
Alignment:
Q  37 ctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| |||||||| |||||| |||||||||||    
T  13243515 ctcaaaacattacattacctcaaaatattcccccatccaaacac 13243558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35111310 - 35111256
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 55  Q
    |||||||||||| |||| ||||| || ||||||||  ||||||||||||||||||    
T  35111310 caaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattccc 35111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattc 53  Q
    |||||| ||||||||| |||||||| |||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17492634 - 17492679
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacat 46  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||    
T  17492634 caaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 26640873 - 26640958
Alignment:
Q  168 tcagaattgtgaggtgcagcggctgctactcggttgttcttctagcctttgt-tgcgtttcagttttgcgttggagtaatctggtt 252  Q
    ||||||||||||||  ||| ||||||| || ||||||||||||||||| |||  ||||||  ||||| |  |||||||||||||||    
T  26640873 tcagaattgtgaggcacagaggctgctgcttggttgttcttctagcctgtgtccgcgtttatgtttttctctggagtaatctggtt 26640958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 28103921 - 28103994
Alignment:
Q  143 agttctttgtggcttttagcgttgtt-cagaattgtgaggtgcagcggctgctactcggttgttcttctagcct 215  Q
    |||||| ||||| ||||||| ||||| |||||||||||||||| | ||||| | || |||| ||||||||||||    
T  28103921 agttctatgtggattttagcattgtttcagaattgtgaggtgcggaggctgatgcttggttattcttctagcct 28103994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 28489546 - 28489505
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaa 43  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  28489546 aaacaatggaattcacctcaaagtatttgaattctctcaaaa 28489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacatt 47  Q
    |||||||||||||||| |||||||| |||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 5658821 - 5658781
Alignment:
Q  40 aaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||||||||||||| |  |||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacac 5658781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 13064957 - 13064997
Alignment:
Q  37 ctcaaaacattacattccctcaaaacattccctcatccaaa 77  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  13064957 ctcaaaacattactttacgtcaaaacattccctcatccaaa 13064997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 83025 - 82943
Alignment:
Q  3 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactctga 85  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacactga 82943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 493 - 559
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 489 - 410
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||   ||||| |||||||| ||||||||||||  ||||||||||| |||||| |||||||||||    
T  489 caaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 2100 - 2034
Alignment:
Q  14 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2104 - 2183
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||   ||||| |||||||| ||||||||||||  ||||||||||| |||||| |||||||||||    
T  2104 caaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 42076 - 42002
Alignment:
Q  6 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 42002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 42080 - 42132
Alignment:
Q  28 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacac 42132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4487 - 4566
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| |||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacac 4566  T

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Target: scaffold0365 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5131 - 5210
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||| |||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacac 5210  T

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Target: scaffold0129 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 19280 - 19203
Alignment:
Q  2 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    ||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattc-ctcaaaacattacattccctcaaaatactcccccatccaaacac 19203  T

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Target: scaffold0129; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 19784 - 19852
Alignment:
Q  11 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||||||||||| |||||||  || |||||||||||||||||||||||| |||| |||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacac 19852  T

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Target: scaffold0027 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10970 - 10905
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 66  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattc 10905  T

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Target: scaffold0318 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2950 - 2872
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||||||||| ||| |||||||||| |||| ||||||    
T  2950 caaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacac 2872  T

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Target: scaffold0301 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7235 - 7156
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||  ||||||| |||||||| || |||||| |||||||||||||||||||||  |||||||||||    
T  7235 caaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacac 7156  T

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Target: scaffold0337 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15855 - 15931
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| |||| |||||||||||    
T  15855 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacac 15931  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2897 - 2973
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 80  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| |||| |||||||||||    
T  2897 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacac 2973  T

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Target: scaffold0790 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 3448 - 3515
Alignment:
Q  229 gttttgcgttggagtaatctggtttggttcacctcagctgtagcaagttttcgtgcaattttgcttct 296  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||| | | |||| |||| ||||||||||    
T  3448 gttttgctttggagtaatatggttttgttcagctcagctgtagtaggctttcatgcagttttgcttct 3515  T

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Target: scaffold0449 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 113
Target Start/End: Original strand, 4312 - 4342
Alignment:
Q  83 tgagggatttttgagggaatttataccttta 113  Q
    |||||||||||||||||||||||||||||||    
T  4312 tgagggatttttgagggaatttataccttta 4342  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 130438 - 130388
Alignment:
Q  1 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 51  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  130438 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 130388  T

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