View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12728_low_17 (Length: 306)

Name: NF12728_low_17
Description: NF12728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12728_low_17
NF12728_low_17
[»] scaffold0449 (1 HSPs)
scaffold0449 (82-298)||(4089-4286)
[»] chr5 (44 HSPs)
chr5 (1-58)||(37722907-37722964)
chr5 (1-58)||(6634015-6634072)
chr5 (1-58)||(9764338-9764395)
chr5 (1-58)||(15374062-15374119)
chr5 (1-58)||(40643919-40643976)
chr5 (1-56)||(2721573-2721628)
chr5 (1-60)||(15804320-15804379)
chr5 (1-56)||(28828449-28828504)
chr5 (1-58)||(2316378-2316435)
chr5 (1-58)||(9764440-9764497)
chr5 (1-58)||(16515120-16515177)
chr5 (1-58)||(22303883-22303940)
chr5 (1-58)||(22766952-22767009)
chr5 (1-58)||(26281282-26281339)
chr5 (3-56)||(28828369-28828422)
chr5 (1-58)||(32390074-32390131)
chr5 (1-58)||(40090427-40090484)
chr5 (1-57)||(3563278-3563334)
chr5 (1-57)||(20523235-20523291)
chr5 (9-56)||(13243514-13243561)
chr5 (1-56)||(32389974-32390029)
chr5 (3-58)||(13243457-13243514)
chr5 (1-58)||(927302-927359)
chr5 (1-58)||(15373960-15374017)
chr5 (1-58)||(23091963-23092019)
chr5 (1-58)||(25935303-25935360)
chr5 (1-58)||(32250111-32250167)
chr5 (1-58)||(35379344-35379400)
chr5 (1-58)||(41762228-41762285)
chr5 (4-56)||(15804399-15804451)
chr5 (1-56)||(19533920-19533975)
chr5 (1-58)||(20523133-20523190)
chr5 (1-58)||(23092064-23092121)
chr5 (1-58)||(34982216-34982272)
chr5 (1-58)||(40809341-40809398)
chr5 (1-57)||(33245385-33245441)
chr5 (1-56)||(37145514-37145569)
chr5 (1-58)||(32470984-32471039)
chr5 (1-58)||(2316481-2316537)
chr5 (1-54)||(9894335-9894388)
chr5 (9-50)||(12991333-12991374)
chr5 (1-54)||(16515009-16515061)
chr5 (1-58)||(32470882-32470939)
chr5 (2-58)||(40809444-40809500)
[»] chr4 (37 HSPs)
chr4 (1-58)||(4896648-4896705)
chr4 (1-58)||(15660285-15660342)
chr4 (1-56)||(26250911-26250966)
chr4 (1-58)||(2125857-2125914)
chr4 (1-58)||(15660183-15660240)
chr4 (1-58)||(49111414-49111471)
chr4 (1-56)||(4896734-4896789)
chr4 (1-58)||(857341-857398)
chr4 (1-58)||(1107154-1107211)
chr4 (1-58)||(1112605-1112662)
chr4 (1-58)||(5715744-5715801)
chr4 (1-58)||(7352914-7352971)
chr4 (1-58)||(11040968-11041024)
chr4 (1-58)||(31473849-31473906)
chr4 (1-58)||(36455907-36455964)
chr4 (1-58)||(41498592-41498649)
chr4 (1-57)||(4441338-4441394)
chr4 (1-56)||(7352814-7352869)
chr4 (1-56)||(10127976-10128031)
chr4 (1-56)||(42844645-42844700)
chr4 (1-55)||(10633035-10633089)
chr4 (4-58)||(14982280-14982334)
chr4 (1-58)||(10128076-10128133)
chr4 (1-58)||(11348339-11348396)
chr4 (1-58)||(28845973-28846030)
chr4 (1-56)||(31742778-31742833)
chr4 (4-58)||(16516171-16516225)
chr4 (1-50)||(1539649-1539698)
chr4 (9-58)||(31742874-31742923)
chr4 (1-58)||(36456028-36456085)
chr4 (1-53)||(28845876-28845928)
chr4 (1-56)||(19461752-19461807)
chr4 (1-58)||(1107051-1107109)
chr4 (1-58)||(1112724-1112781)
chr4 (1-58)||(35470122-35470179)
chr4 (11-56)||(42542979-42543024)
chr4 (1-58)||(55266877-55266934)
[»] chr3 (39 HSPs)
chr3 (1-58)||(9129446-9129503)
chr3 (1-58)||(9137553-9137610)
chr3 (1-58)||(46429498-46429555)
chr3 (1-58)||(47284328-47284385)
chr3 (1-58)||(5415783-5415840)
chr3 (1-58)||(46672818-46672875)
chr3 (1-58)||(49457343-49457400)
chr3 (1-58)||(5415885-5415942)
chr3 (1-58)||(27251996-27252053)
chr3 (1-58)||(36398004-36398061)
chr3 (1-58)||(44436258-44436315)
chr3 (1-58)||(44692822-44692879)
chr3 (1-58)||(44692924-44692981)
chr3 (1-58)||(47767432-47767489)
chr3 (1-58)||(53129858-53129915)
chr3 (2-58)||(7302346-7302402)
chr3 (2-58)||(46001364-46001420)
chr3 (1-56)||(42130694-42130749)
chr3 (4-58)||(42005971-42006025)
chr3 (1-58)||(9129344-9129401)
chr3 (1-58)||(9137451-9137508)
chr3 (1-54)||(21307547-21307600)
chr3 (1-58)||(28092214-28092271)
chr3 (1-58)||(31189412-31189469)
chr3 (1-58)||(37054394-37054451)
chr3 (1-58)||(37321550-37321607)
chr3 (1-58)||(53470444-53470501)
chr3 (1-56)||(39215940-39215995)
chr3 (1-39)||(31070508-31070546)
chr3 (4-54)||(35279920-35279970)
chr3 (1-50)||(31070415-31070463)
chr3 (1-58)||(34088571-34088628)
chr3 (1-58)||(39110394-39110451)
chr3 (1-58)||(46635857-46635914)
chr3 (2-58)||(671635-671691)
chr3 (27-58)||(47284226-47284257)
chr3 (1-54)||(1146960-1147013)
chr3 (1-58)||(21730902-21730959)
chr3 (1-58)||(48947605-48947662)
[»] chr2 (31 HSPs)
chr2 (1-58)||(17180297-17180354)
chr2 (1-58)||(784895-784952)
chr2 (1-58)||(14365700-14365757)
chr2 (1-58)||(41461617-41461674)
chr2 (1-56)||(11532269-11532324)
chr2 (1-56)||(11793897-11793952)
chr2 (1-54)||(11684603-11684656)
chr2 (1-58)||(14365801-14365858)
chr2 (1-58)||(14537199-14537256)
chr2 (1-58)||(27033490-27033547)
chr2 (4-56)||(41461517-41461569)
chr2 (4-58)||(45094490-45094544)
chr2 (1-58)||(769036-769093)
chr2 (1-58)||(1583825-1583882)
chr2 (1-58)||(10244177-10244234)
chr2 (1-58)||(10480119-10480176)
chr2 (1-58)||(11141305-11141362)
chr2 (1-58)||(11716408-11716465)
chr2 (1-50)||(11716501-11716550)
chr2 (1-58)||(33189273-33189330)
chr2 (1-58)||(35047695-35047752)
chr2 (3-56)||(44256211-44256263)
chr2 (1-55)||(28740599-28740653)
chr2 (1-58)||(13017779-13017836)
chr2 (1-58)||(17905654-17905711)
chr2 (1-50)||(30698289-30698338)
chr2 (4-57)||(30751365-30751418)
chr2 (4-58)||(7228031-7228085)
chr2 (9-58)||(11981580-11981629)
chr2 (1-58)||(39630225-39630282)
chr2 (4-52)||(40026070-40026118)
[»] chr1 (40 HSPs)
chr1 (1-56)||(40264132-40264187)
chr1 (4-58)||(8224768-8224822)
chr1 (1-58)||(4038177-4038234)
chr1 (1-58)||(15034761-15034818)
chr1 (1-58)||(23536067-23536124)
chr1 (1-58)||(38277415-38277472)
chr1 (1-57)||(32573024-32573080)
chr1 (1-56)||(38277517-38277571)
chr1 (1-56)||(50005181-50005236)
chr1 (1-55)||(37036965-37037019)
chr1 (1-58)||(4038075-4038132)
chr1 (1-58)||(15034659-15034716)
chr1 (1-58)||(24273236-24273293)
chr1 (1-58)||(26501095-26501152)
chr1 (1-58)||(30190238-30190295)
chr1 (1-58)||(34756427-34756484)
chr1 (1-58)||(44410413-44410470)
chr1 (1-58)||(50005079-50005136)
chr1 (1-56)||(28632601-28632656)
chr1 (1-56)||(28745799-28745854)
chr1 (1-56)||(34756529-34756584)
chr1 (1-55)||(45565397-45565451)
chr1 (1-58)||(6470702-6470759)
chr1 (1-54)||(27804269-27804322)
chr1 (1-58)||(27935587-27935644)
chr1 (5-58)||(31166310-31166363)
chr1 (1-58)||(47165228-47165285)
chr1 (1-53)||(28745898-28745950)
chr1 (1-58)||(10166499-10166556)
chr1 (1-58)||(25889158-25889214)
chr1 (1-58)||(27804367-27804424)
chr1 (1-58)||(29446750-29446807)
chr1 (1-58)||(32287949-32288006)
chr1 (4-49)||(37448420-37448465)
chr1 (10-58)||(43623003-43623051)
chr1 (1-56)||(34003379-34003434)
chr1 (28-58)||(17502198-17502228)
chr1 (1-51)||(37447918-37447968)
chr1 (1-58)||(44410311-44410368)
chr1 (1-49)||(44570687-44570735)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-54)||(56376-56429)
[»] chr8 (33 HSPs)
chr8 (1-58)||(14800062-14800119)
chr8 (1-58)||(24044960-24045017)
chr8 (1-56)||(4156269-4156324)
chr8 (1-56)||(13404829-13404884)
chr8 (4-58)||(37268112-37268166)
chr8 (1-58)||(3853616-3853673)
chr8 (1-58)||(3858074-3858131)
chr8 (1-58)||(14991692-14991749)
chr8 (1-58)||(17110869-17110926)
chr8 (1-58)||(31807409-31807465)
chr8 (1-58)||(33902667-33902724)
chr8 (1-58)||(42711382-42711439)
chr8 (1-56)||(3853718-3853773)
chr8 (1-56)||(3858176-3858231)
chr8 (1-58)||(11744745-11744802)
chr8 (1-58)||(17110971-17111028)
chr8 (1-58)||(28324688-28324745)
chr8 (1-58)||(29257377-29257434)
chr8 (1-58)||(33377323-33377380)
chr8 (1-58)||(40046804-40046861)
chr8 (1-58)||(44889354-44889411)
chr8 (1-56)||(29482833-29482888)
chr8 (1-58)||(14239-14295)
chr8 (1-58)||(23011734-23011791)
chr8 (1-58)||(33986004-33986061)
chr8 (1-58)||(36103101-36103158)
chr8 (1-54)||(44346704-44346757)
chr8 (1-41)||(13404929-13404969)
chr8 (10-58)||(32626069-32626117)
chr8 (1-41)||(40046892-40046932)
chr8 (1-58)||(515558-515615)
chr8 (13-58)||(27322687-27322732)
chr8 (1-41)||(8049271-8049311)
[»] chr7 (38 HSPs)
chr7 (1-58)||(2057497-2057554)
chr7 (1-58)||(35776957-35777014)
chr7 (1-58)||(40110737-40110794)
chr7 (1-58)||(43955517-43955574)
chr7 (1-56)||(43955616-43955671)
chr7 (1-58)||(2057395-2057452)
chr7 (1-58)||(5644779-5644836)
chr7 (1-58)||(6498767-6498824)
chr7 (1-54)||(23455249-23455302)
chr7 (1-58)||(25189228-25189285)
chr7 (1-58)||(26162139-26162196)
chr7 (1-58)||(28539170-28539227)
chr7 (1-58)||(31632722-31632779)
chr7 (1-58)||(34398950-34399008)
chr7 (1-58)||(5644677-5644734)
chr7 (1-58)||(14603264-14603321)
chr7 (1-58)||(21635885-21635942)
chr7 (1-58)||(29065819-29065876)
chr7 (1-58)||(29065921-29065978)
chr7 (1-58)||(34388367-34388424)
chr7 (1-58)||(35455804-35455861)
chr7 (1-58)||(39342644-39342701)
chr7 (1-58)||(40110840-40110897)
chr7 (1-58)||(44915195-44915252)
chr7 (1-57)||(9784933-9784989)
chr7 (11-58)||(29195709-29195756)
chr7 (1-58)||(18789248-18789305)
chr7 (1-58)||(23548613-23548670)
chr7 (1-58)||(34388265-34388322)
chr7 (1-58)||(49052786-49052842)
chr7 (7-56)||(18926812-18926861)
chr7 (27-60)||(19865564-19865597)
chr7 (1-58)||(29639217-29639274)
chr7 (1-58)||(30524255-30524312)
chr7 (4-52)||(21635990-21636038)
chr7 (1-49)||(22351874-22351922)
chr7 (4-56)||(22391592-22391644)
chr7 (1-56)||(46069493-46069545)
[»] chr6 (17 HSPs)
chr6 (1-58)||(9285647-9285704)
chr6 (1-58)||(9763114-9763171)
chr6 (1-58)||(6919809-6919866)
chr6 (1-58)||(34244996-34245053)
chr6 (1-58)||(8574695-8574752)
chr6 (1-58)||(8574767-8574824)
chr6 (1-58)||(29889450-29889507)
chr6 (1-56)||(6919710-6919765)
chr6 (1-56)||(9763014-9763069)
chr6 (1-58)||(13487275-13487332)
chr6 (1-54)||(15299527-15299579)
chr6 (1-58)||(28918165-28918222)
chr6 (1-58)||(776080-776137)
chr6 (1-58)||(776182-776239)
chr6 (1-58)||(1368477-1368534)
chr6 (1-54)||(15832470-15832523)
chr6 (18-58)||(33733432-33733472)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-56)||(507-562)
scaffold1562 (1-58)||(405-462)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-56)||(2031-2086)
scaffold1158 (1-58)||(2131-2188)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-57)||(4514-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-57)||(5158-5214)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-56)||(82945-83000)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-58)||(4075-4132)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-58)||(41997-42054)
scaffold0009 (1-58)||(42080-42137)
[»] scaffold0129 (1 HSPs)
scaffold0129 (9-56)||(19200-19247)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-58)||(2867-2924)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-56)||(7153-7208)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-57)||(10887-10943)


Alignment Details
Target: scaffold0449 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 82 - 298
Target Start/End: Complemental strand, 4286 - 4089
Alignment:
Q  82 aaaagaaatggtatatataaat---ctcattactcccattatgatcgactacagctaccacatttctcatttcttctcctccctcaccatggctatctga 178  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||           
T  4286 aaaaaaaatggtatatataaattccctcattactcccattatgatcgactacagctaccacatttctcatttcttctcttccctcaccatggc------- 4194  T
Q  179 tacaaatgatatcactatcacaatccaaaaggtatgcattcttggcctttctgaggacttgaaagatgacattgagaaaatttcagtatacattcttggc 278  Q
                   |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4193 ---------------tatcacaacccaaaaggtatgcattcttggcctttctcaggacttgaaagatcacattgagaaaatttcagtatgcattcttggc 4109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37722907 - 37722964
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37722907 ttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6634072 - 6634015
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactct 6634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9764395 - 9764338
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  9764395 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 9764338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15374062 - 15374119
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  15374062 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40643919 - 40643976
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40643919 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2721573 - 2721628
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  2721573 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15804379 - 15804320
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactctca 60  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||    
T  15804379 ttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactctca 15804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28828449 - 28828504
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  28828449 ttgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2316435 - 2316378
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||    
T  2316435 ttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactct 2316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9764440 - 9764497
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||    
T  9764440 ttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16515120 - 16515177
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||    
T  16515120 ttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactct 16515177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22303883 - 22303940
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  22303883 ttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22767009 - 22766952
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  22767009 ttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26281282 - 26281339
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  26281282 ttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  3 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32390074 - 32390131
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||    
T  32390074 ttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactct 32390131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40090427 - 40090484
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40090427 ttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactct 40090484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3563334 - 3563278
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  3563334 ttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20523235 - 20523291
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    |||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||    
T  20523235 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 13243514 - 13243561
Alignment:
Q  9 cctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32390029 - 32389974
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||||||||||| |||||||| | |||||| |||||||||||||||||||||    
T  32390029 ttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 13243514 - 13243457
Alignment:
Q  3 gaattccctcaaaacattacattgcctcaaaatattccctcatc--caaacacactct 58  Q
    ||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactct 13243457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 927359 - 927302
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| |||||||| ||| || ||||||||||||||||    
T  927359 ttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactct 927302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15374017 - 15373960
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  15374017 ttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23092019 - 23091963
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  23092019 ttgaattccttcaaaacattacattccctcaaaatattccc-catcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25935303 - 25935360
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  25935303 ttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactct 25935360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32250111 - 32250167
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  32250111 ttgaattccctcaaaacattactttccctcaaaacattccc-catccaaacacactct 32250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35379400 - 35379344
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  35379400 ttgaattccctcaaaacattacattatctcaaaacattccc-catccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41762228 - 41762285
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  41762228 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 41762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||||||||||||||||| |||||||| ||| || ||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19533920 - 19533975
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||    
T  19533920 ttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20523190 - 20523133
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| || |||||||| |||||||| |||| | ||||||||||||||||    
T  20523190 ttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23092064 - 23092121
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||| |||||||||||||||||||   |||||| |||||| ||||||||||||||||    
T  23092064 ttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactct 23092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34982272 - 34982216
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||| ||||| |||||||| ||||||  |||||||||||||||    
T  34982272 ttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactct 34982216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40809398 - 40809341
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||| |||  ||||||| ||| || ||||||||||||||||    
T  40809398 ttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactct 40809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33245385 - 33245441
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    |||||||  |||||||||||||||| | |||||| |||||| |||||||||||||||    
T  33245385 ttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37145514 - 37145569
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||| |||| ||||||||||| |||||||| |||||| ||||||||| ||||    
T  37145514 ttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32470984 - 32471039
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||  || ||| || ||||||||||||||||    
T  32470984 ttgaattccctcaaaacattacattccctc--aagatttccacatccaaacacactct 32471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2316481 - 2316537
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||| |||||||| |||  | ||||||||||||||||    
T  2316481 ttgaattctctcaaaacattacattccctcaaaacattttc-catccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9894335 - 9894388
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    |||||||||||   ||||||||||| |||||||| |||||| ||||||||||||    
T  9894335 ttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 12991333 - 12991374
Alignment:
Q  9 cctcaaaacattacattgcctcaaaatattccctcatccaaa 50  Q
    |||||||||||||| || |||||||| |||||||||||||||    
T  12991333 cctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16515061 - 16515009
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||||||||||||||| ||||||| |||||||| |||| | ||||||||||||    
T  16515061 ttgaattccctcaaaaccttacattccctcaaaacattctc-catccaaacaca 16515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32470939 - 32470882
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||| ||| |  |||||||| |||||||    
T  32470939 ttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactct 32470882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 40809444 - 40809500
Alignment:
Q  2 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||  ||||||| ||| || |||| |||||||||||    
T  40809444 tgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4896705 - 4896648
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15660285 - 15660342
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  15660285 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26250966 - 26250911
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26250966 ttgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacact 26250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2125914 - 2125857
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  2125914 ttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15660240 - 15660183
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  15660240 ttgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 15660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49111414 - 49111471
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  49111414 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4896734 - 4896789
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  4896734 ttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 4896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 857341 - 857398
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  857341 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1107154 - 1107211
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  1107154 ttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1112662 - 1112605
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||    
T  1112662 ttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactct 1112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5715801 - 5715744
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  5715801 ttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7352914 - 7352971
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  7352914 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 7352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11041024 - 11040968
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  11041024 ttgaattctctcaaaacattacattccctcaaaatattccc-catccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31473906 - 31473849
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  31473906 ttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36455964 - 36455907
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  36455964 ttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41498592 - 41498649
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  41498592 ttgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4441394 - 4441338
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7352869 - 7352814
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  7352869 ttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10128031 - 10127976
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||    
T  10128031 ttgaattccttcaaaacattacattacttcaaaatattcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42844645 - 42844700
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||| |||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  42844645 ttgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10633089 - 10633035
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 55  Q
    ||||||||||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  10633089 ttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14982334 - 14982280
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  14982334 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10128076 - 10128133
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| |||||| |||||||| |||||||    
T  10128076 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11348339 - 11348396
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||    
T  11348339 ttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28845973 - 28846030
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||| ||| |||||||| ||| || ||||||||||||||||    
T  28845973 ttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31742833 - 31742778
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||| | ||| ||||||||||  ||||||||||||||    
T  31742833 ttgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 16516225 - 16516171
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||| ||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  16516225 aattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1539698 - 1539649
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 50  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  1539698 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 31742874 - 31742923
Alignment:
Q  9 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactct 31742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36456028 - 36456085
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| |||||||| |||||||| |||||||| |||||  ||||||||||||||||    
T  36456028 ttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactct 36456085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28845928 - 28845876
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacac 53  Q
    |||||||||||| |||||||||||| |||||||| |||||  |||||||||||    
T  28845928 ttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19461752 - 19461807
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||| |||||||||||||||| | |||||||||| || |||||||| |||||    
T  19461752 ttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1107109 - 1107051
Alignment:
Q  1 ttgaattccctcaaaacattacattgcc-tcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| || | |||| ||| |||||||||||||||||||    
T  1107109 ttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactct 1107051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1112724 - 1112781
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||| ||||||||||||  ||||||| || ||| |||||||||| |||||    
T  1112724 ttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35470179 - 35470122
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| |||||||| ||| |  |||| |||||||||||    
T  35470179 ttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  11 tcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||| |||||||| |||||  ||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 55266877 - 55266934
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||| |||| ||| |||||||| ||||   ||||||||||||||||    
T  55266877 ttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9129446 - 9129503
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9129446 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9137553 - 9137610
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9137553 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46429498 - 46429555
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46429498 ttgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47284328 - 47284385
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  47284328 ttgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5415840 - 5415783
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  5415840 ttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactct 5415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46672818 - 46672875
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  46672818 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49457400 - 49457343
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  49457400 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49457343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5415885 - 5415942
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||    
T  5415885 ttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27251996 - 27252053
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||    
T  27251996 ttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactct 27252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36398004 - 36398061
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  36398004 ttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44436315 - 44436258
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  44436315 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 44436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44692879 - 44692822
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  44692879 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44692924 - 44692981
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  44692924 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 44692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47767489 - 47767432
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  47767489 ttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53129858 - 53129915
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||    
T  53129858 ttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactct 53129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7302402 - 7302346
Alignment:
Q  2 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||  ||||||| |||||||||||||||||||||||    
T  7302402 tgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactct 7302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 46001420 - 46001364
Alignment:
Q  2 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactct 46001364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42130749 - 42130694
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||  ||||||||||||||| || |||||||||||    
T  42130749 ttgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacact 42130694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 42005971 - 42006025
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  42005971 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 42006025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9129401 - 9129344
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||||| || | ||||||||||||||||    
T  9129401 ttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9129344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9137508 - 9137451
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||||| || | ||||||||||||||||    
T  9137508 ttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9137451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21307547 - 21307600
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  21307547 ttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28092271 - 28092214
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||| ||||| |||||||| |||||| |||||||||| |||||    
T  28092271 ttgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31189412 - 31189469
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  31189412 ttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37054451 - 37054394
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  37054451 ttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37321607 - 37321550
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| |||||||||||||| || ||||||||||||||| |||||||| |||||||    
T  37321607 ttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53470444 - 53470501
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| || ||| |||||||| ||| |||||||||||||||||||    
T  53470444 ttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39215940 - 39215995
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||  |||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  39215940 ttgaattttctcaaaacattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31070508 - 31070546
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  31070508 ttgaattccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||| |||||||||||||||| |||||||| |||||| ||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31070463 - 31070415
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 50  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  31070463 ttgaattccctcaaaacattacattccctcaaaacattccc-catccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34088628 - 34088571
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| |||||||| ||| |  ||||||||||||||||    
T  34088628 ttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactct 34088571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39110451 - 39110394
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||| ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  39110451 ttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46635914 - 46635857
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| |||||||||||||||||  ||||||| |||  ||||||||||||||||||    
T  46635914 ttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactct 46635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 671635 - 671691
Alignment:
Q  2 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||| |||||| |||||||| ||||||  ||||||| |||||||    
T  671635 tgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactct 671691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 58
Target Start/End: Original strand, 47284226 - 47284257
Alignment:
Q  27 cctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||||||||||    
T  47284226 cctcaaaatattccctcatccaaacacactct 47284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1146960 - 1147013
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    |||||||  ||||||| ||||||||  |||||||||||||||||| ||||||||    
T  1146960 ttgaattttctcaaaaaattacattagctcaaaatattccctcattcaaacaca 1147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21730959 - 21730902
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||  ||| |  | |||||||||||||||||||||||    
T  21730959 ttgaattccttcaaaacattacataaccttaggacattccctcatccaaacacactct 21730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48947662 - 48947605
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| ||||||||| |||||| |||||||| ||||   ||||||||||||||||    
T  48947662 ttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17180354 - 17180297
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  17180354 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 17180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 784895 - 784952
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  784895 ttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14365757 - 14365700
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14365757 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14365700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41461617 - 41461674
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  41461617 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11532269 - 11532324
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  11532269 ttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11793952 - 11793897
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  11793952 ttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11684656 - 11684603
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14365801 - 14365858
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  14365801 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14537256 - 14537199
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14537256 ttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27033547 - 27033490
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  27033547 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactct 27033490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 41461569 - 41461517
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  41461569 aattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 41461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 45094490 - 45094544
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  45094490 aattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 769093 - 769036
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  769093 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1583825 - 1583882
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  1583825 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10244234 - 10244177
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || ||||| ||||||| | ||||||||||||||||    
T  10244234 ttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10480176 - 10480119
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||  ||||||||||| |||||||| |||||| ||||||||||||||||    
T  10480176 ttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 10480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11141362 - 11141305
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  11141362 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 11141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11716465 - 11716408
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  11716465 ttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 50  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33189273 - 33189330
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  33189273 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 33189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35047695 - 35047752
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  35047695 ttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 44256211 - 44256263
Alignment:
Q  3 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  44256211 gaattccctcaaaacattacattacctc-aaatattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28740653 - 28740599
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 55  Q
    ||||||||||||||||||||||||| |||||||| ||| || ||| |||||||||    
T  28740653 ttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13017836 - 13017779
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||| |||||||| |||||||| ||| || ||||||||||||||||    
T  13017836 ttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17905711 - 17905654
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| | |||||||||||||  ||||||| |||||||||||| ||||||||||    
T  17905711 ttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactct 17905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30698338 - 30698289
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 50  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  30698338 ttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 30751365 - 30751418
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  30751365 aattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 7228031 - 7228085
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||| |||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  7228031 aattccttcaaaacattacattctctcaaaacatttccccatccaaacacactct 7228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 11981580 - 11981629
Alignment:
Q  9 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||| ||  |||||||||  |||||||||||||||||    
T  11981580 cctcaaaacattacattaccctaaaatattctttcatccaaacacactct 11981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39630282 - 39630225
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| |||||||| ||| |  ||| ||||||||||||    
T  39630282 ttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactct 39630225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 40026118 - 40026070
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaaca 52  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  40026118 aatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40264132 - 40264187
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  40264132 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 8224822 - 8224768
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  8224822 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 8224768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4038177 - 4038234
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  4038177 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15034761 - 15034818
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  15034761 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23536124 - 23536067
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  23536124 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 23536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38277472 - 38277415
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  38277472 ttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactct 38277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32573024 - 32573080
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  32573024 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38277517 - 38277571
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  38277517 ttgaattccctcaaaacattacattacctcaaaatattccc-catccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50005181 - 50005236
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  50005181 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37036965 - 37037019
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 55  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  37036965 ttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4038132 - 4038075
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||    
T  4038132 ttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactct 4038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15034716 - 15034659
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  15034716 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 15034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24273236 - 24273293
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  24273236 ttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26501095 - 26501152
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  26501095 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 26501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30190238 - 30190295
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  30190238 ttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34756484 - 34756427
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||    
T  34756484 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44410413 - 44410470
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||| ||||||| |||||||||||||||  |||||||||||||||    
T  44410413 ttgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactct 44410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50005136 - 50005079
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  50005136 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactct 50005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28632601 - 28632656
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||    
T  28632601 ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacact 28632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28745854 - 28745799
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  28745854 ttgaattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34756529 - 34756584
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||    
T  34756529 ttgaattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45565451 - 45565397
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 55  Q
    |||||||||||||||||||||||||  ||||||| |||||| |||||||||||||    
T  45565451 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6470702 - 6470759
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||    
T  6470702 ttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27804322 - 27804269
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    |||||||||||||||| |||||||| |||||||| |||||| ||||||||||||    
T  27804322 ttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27935587 - 27935644
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||||||| |  ||||||||||||||||    
T  27935587 ttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactct 27935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 31166363 - 31166310
Alignment:
Q  5 attccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||||||||||||    
T  31166363 attccatcaaaacattacattatctcaaaacattccctcatccaaacacactct 31166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47165228 - 47165285
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||| |  ||||||||||||||||    
T  47165228 ttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28745898 - 28745950
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacac 53  Q
    |||||||||||||||| |||||||| ||| ||||||||| |||||||||||||    
T  28745898 ttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10166556 - 10166499
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||| |||| ||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  10166556 ttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacacactct 10166499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25889214 - 25889158
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||    
T  25889214 ttgaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacactct 25889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27804367 - 27804424
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| || |||||||||||| |||||||| |||||  ||||||||||||||||    
T  27804367 ttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactct 27804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29446807 - 29446750
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| | |||||| |||||| | | ||||||||||||    
T  29446807 ttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactct 29446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32287949 - 32288006
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| ||||||||  ||||  ||||||||||||||||    
T  32287949 ttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactct 32288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37448420 - 37448465
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaa 49  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  37448420 aattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 43623003 - 43623051
Alignment:
Q  10 ctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  43623003 ctcaaaacattacattccatcaaaacattcccccatccaaacacactct 43623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34003434 - 34003379
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||| ||||||||| |||| ||||| | ||||||||| ||||||||||||||||    
T  34003434 ttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacacact 34003379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 17502228 - 17502198
Alignment:
Q  28 ctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||||||||    
T  17502228 ctcaaaatattccctcatccaaacacactct 17502198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37447918 - 37447968
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaac 51  Q
    ||||||||| ||||||||||||||| |||| ||||||||||  ||||||||    
T  37447918 ttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44410368 - 44410311
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| || ||||||||||||| |||||||| |||| | |||||||| |||||||    
T  44410368 ttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44570735 - 44570687
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaa 49  Q
    ||||||||| ||||||||||||||| |||||||| |||| | |||||||    
T  44570735 ttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 56376 - 56429
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  56376 ttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14800062 - 14800119
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  14800062 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24045017 - 24044960
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  24045017 ttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4156269 - 4156324
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  4156269 ttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13404884 - 13404829
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  13404884 ttgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 37268112 - 37268166
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  37268112 aattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3853673 - 3853616
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  3853673 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3858131 - 3858074
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  3858131 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14991749 - 14991692
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactct 14991692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17110926 - 17110869
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  17110926 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 17110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31807465 - 31807409
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  31807465 ttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33902724 - 33902667
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  33902724 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42711382 - 42711439
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||||||  |||||||||||||||    
T  42711382 ttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactct 42711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3853718 - 3853773
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||||||| |||||||||||| |||||||||||| || ||||||||||||||    
T  3853718 ttgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3858176 - 3858231
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||||||| |||||||||||| |||||||||||| || ||||||||||||||    
T  3858176 ttgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11744745 - 11744802
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||| ||||||||||| |||| |||||||| ||||||||||||||||||    
T  11744745 ttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactct 11744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17110971 - 17111028
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||| |  ||||||||||||||||    
T  17110971 ttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28324688 - 28324745
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| ||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  28324688 ttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29257377 - 29257434
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  29257377 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33377323 - 33377380
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| || ||| |||||||| |||||| ||||||||||||||||    
T  33377323 ttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactct 33377380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40046861 - 40046804
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  40046861 ttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 40046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44889411 - 44889354
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||    
T  44889411 ttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29482833 - 29482888
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    |||||||||||||||||| ||| || |||||||| |||||| ||||||||||||||    
T  29482833 ttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14295 - 14239
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| ||||||||||||| |||| ||| |||||| ||||||||||||||||    
T  14295 ttgaattcccttaaaacattacattccctccaaacattccc-catccaaacacactct 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23011791 - 23011734
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||||||| |||||||| |||| | | ||||||||||||||    
T  23011791 ttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactct 23011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33986061 - 33986004
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||| | |||| | |||||| ||||||||||||||||    
T  33986061 ttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactct 33986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36103158 - 36103101
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||| ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  36103158 ttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 36103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44346704 - 44346757
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||    
T  44346704 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13404929 - 13404969
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccc 41  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  13404929 ttgaattccctcaaaacattacattccctcaaaacattccc 13404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 32626069 - 32626117
Alignment:
Q  10 ctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||| |||||||| |||||| ||||||| ||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactct 32626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40046892 - 40046932
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccc 41  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  40046892 ttgaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 515558 - 515615
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||| ||||| ||||||||||||| | |||||| |||||  ||||||||||||||||    
T  515558 ttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27322687 - 27322732
Alignment:
Q  13 aaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| |||||||| |||| | ||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactct 27322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8049311 - 8049271
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccc 41  Q
    ||||||||||||||||||||| ||| |||||||| ||||||    
T  8049311 ttgaattccctcaaaacattatattccctcaaaacattccc 8049271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2057497 - 2057554
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  2057497 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35776957 - 35777014
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  35776957 ttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactct 35777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40110794 - 40110737
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40110794 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43955574 - 43955517
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  43955574 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 43955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43955616 - 43955671
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  43955616 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2057452 - 2057395
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  2057452 ttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactct 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5644779 - 5644836
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  5644779 ttgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6498767 - 6498824
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  6498767 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23455249 - 23455302
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  23455249 ttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25189228 - 25189285
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||    
T  25189228 ttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactct 25189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26162139 - 26162196
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  26162139 ttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28539170 - 28539227
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  28539170 ttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31632779 - 31632722
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  31632779 ttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34398950 - 34399008
Alignment:
Q  1 ttgaattc-cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  34398950 ttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5644734 - 5644677
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  5644734 ttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 5644677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14603264 - 14603321
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  14603264 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 14603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21635942 - 21635885
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||| |||||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  21635942 ttgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactct 21635885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29065876 - 29065819
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  29065876 ttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 29065819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29065921 - 29065978
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||| |||| |||||  ||||||||||||||||    
T  29065921 ttgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34388367 - 34388424
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||| |||||||| |||||||| ||||| |||| ||||||||||||    
T  34388367 ttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35455861 - 35455804
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  35455861 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39342644 - 39342701
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  39342644 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 39342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40110840 - 40110897
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||| ||| ||| || ||||||||||||||||    
T  40110840 ttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactct 40110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44915252 - 44915195
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||| |||||||||||| || |||||||| |||| ||||||||||||||||||    
T  44915252 ttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactct 44915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9784933 - 9784989
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    |||||||||||||||||| |||||| |||||||| |||||  |||||||||||||||    
T  9784933 ttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 29195756 - 29195709
Alignment:
Q  11 tcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactct 29195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18789248 - 18789305
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| ||||||| |||  |||||||||||||  ||||||||||||||||    
T  18789248 ttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23548613 - 23548670
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| |||||||||| |||||| |||||||| |||||  ||||||||||||||||    
T  23548613 ttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34388322 - 34388265
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||| |||||||| || |||||||||||| || ||||||||||||||||    
T  34388322 ttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactct 34388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49052842 - 49052786
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||| |||||||| |||  ||||||||||||||||||    
T  49052842 ttgaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacactct 49052786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 18926812 - 18926861
Alignment:
Q  7 tccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||| ||||||||| | ||| |||| |||||||||    
T  18926812 tccctcaaaacattacattacctcaaaatgtccccccatcaaaacacact 18926861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 19865564 - 19865597
Alignment:
Q  27 cctcaaaatattccctcatccaaacacactctca 60  Q
    |||||||| |||||||||||||||||||||||||    
T  19865564 cctcaaaacattccctcatccaaacacactctca 19865597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29639217 - 29639274
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||| ||||||||||| ||| |||| |||||| |||||| |||||||||    
T  29639217 ttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactct 29639274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30524312 - 30524255
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| | |||||| ||| |  |||||| |||||||||    
T  30524312 ttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactct 30524255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 21635990 - 21636038
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaaca 52  Q
    |||||| ||||||||||||||| |||||||| ||| || ||||||||||    
T  21635990 aattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaa 49  Q
    |||||||| |||||||||||||||| || ||||| |||||| |||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22391592 - 22391644
Alignment:
Q  4 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||| |||||||||||||||| |||||||| |||  ||||| ||||||||||    
T  22391592 aattctctcaaaacattacattccctcaaaacattatctcattcaaacacact 22391644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46069493 - 46069545
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||  ||||||||| ||||||| ||||||| ||||||||||||||    
T  46069493 ttgaattccctcaa--cattacattacctcaaa-tattcccccatccaaacacact 46069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9285704 - 9285647
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  9285704 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9763114 - 9763171
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactct 9763171  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6919809 - 6919866
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 6919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34244996 - 34245053
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  34244996 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8574752 - 8574695
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  8574752 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8574767 - 8574824
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  8574767 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29889450 - 29889507
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| | |||||| |||||  ||||||||||||||||    
T  29889450 ttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6919765 - 6919710
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||  |||||  ||||||||||||||    
T  6919765 ttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9763069 - 9763014
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||| ||| || | ||||||||||||    
T  9763069 ttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13487332 - 13487275
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||| |||| |||||| |||||||| |||||| |||| |||||||||||    
T  13487332 ttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15299527 - 15299579
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||    
T  15299527 ttgaattccttcaaaacattacattccctcaaaacattccc-catccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28918222 - 28918165
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||| ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  28918222 ttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 28918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 776137 - 776080
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| ||| |  |||| |||||||||||    
T  776137 ttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 776182 - 776239
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||| ||||||||||||||||| |||||||| |||  |  |||||||||||||||    
T  776182 ttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactct 776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1368534 - 1368477
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||| |||| ||||||||  ||||||| |||||  ||||||||||||||||    
T  1368534 ttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15832523 - 15832470
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 54  Q
    ||||||||||| ||||||||||||| | || ||| ||| |||||||||||||||    
T  15832523 ttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacaca 15832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  18 attacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||| |||||| ||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 507 - 562
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  507 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 462 - 405
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  462 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2086 - 2031
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  2086 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2131 - 2188
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  2131 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4514 - 4570
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  4514 ttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5158 - 5214
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  5158 ttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 83000 - 82945
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||||||||||| |||||||| |||| | ||||||||||||||    
T  83000 ttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4132 - 4075
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||||||| ||||| | |||||||||||||||    
T  4132 ttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42054 - 41997
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  42054 ttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42080 - 42137
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 42137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 19247 - 19200
Alignment:
Q  9 cctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  19247 cctcaaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2924 - 2867
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 58  Q
    |||||||||||||||||||||||||  ||| ||| |||||| |||| |||||||||||    
T  2924 ttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7208 - 7153
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 56  Q
    ||||||||||| |||||| |||||| |||||||| |||||  ||||||||||||||    
T  7208 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10943 - 10887
Alignment:
Q  1 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 57  Q
    ||||||||||||||||||||||||| ||| |||| ||||   ||| |||||||||||    
T  10943 ttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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