View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12728_low_3 (Length: 608)

Name: NF12728_low_3
Description: NF12728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12728_low_3
NF12728_low_3
[»] scaffold0170 (3 HSPs)
scaffold0170 (22-258)||(4434-4672)
scaffold0170 (342-491)||(4680-4829)
scaffold0170 (483-600)||(4993-5110)
[»] chr7 (27 HSPs)
chr7 (96-218)||(45054839-45054962)
chr7 (110-220)||(22074622-22074732)
chr7 (96-216)||(41449193-41449314)
chr7 (93-216)||(33899578-33899702)
chr7 (93-216)||(17025970-17026095)
chr7 (96-216)||(42071566-42071687)
chr7 (131-218)||(11596403-11596490)
chr7 (96-216)||(3931321-3931443)
chr7 (110-216)||(10618082-10618188)
chr7 (96-196)||(23236775-23236876)
chr7 (96-216)||(26215763-26215884)
chr7 (151-216)||(26719244-26719309)
chr7 (93-216)||(18250619-18250743)
chr7 (131-209)||(33124170-33124248)
chr7 (96-216)||(37333743-37333865)
chr7 (131-216)||(8390111-8390196)
chr7 (160-192)||(8110870-8110902)
chr7 (164-216)||(35544142-35544194)
chr7 (161-216)||(18740832-18740887)
chr7 (131-196)||(33172135-33172200)
chr7 (96-216)||(43052328-43052449)
chr7 (167-216)||(45174732-45174781)
chr7 (161-214)||(46574231-46574284)
chr7 (160-216)||(388526-388582)
chr7 (160-216)||(5776538-5776594)
chr7 (160-216)||(7443940-7443996)
chr7 (160-216)||(20400283-20400339)
[»] chr1 (12 HSPs)
chr1 (110-218)||(43090003-43090111)
chr1 (93-216)||(7955692-7955816)
chr1 (95-216)||(15257819-15257941)
chr1 (110-216)||(24575361-24575467)
chr1 (96-212)||(47982707-47982823)
chr1 (161-210)||(3577050-3577099)
chr1 (94-213)||(29678080-29678200)
chr1 (96-214)||(37441788-37441907)
chr1 (147-216)||(40160277-40160346)
chr1 (93-208)||(15305925-15306041)
chr1 (144-196)||(19508001-19508053)
chr1 (160-216)||(24470499-24470555)
[»] chr5 (15 HSPs)
chr5 (96-218)||(4983936-4984059)
chr5 (110-218)||(41782755-41782863)
chr5 (97-218)||(26217470-26217592)
chr5 (147-216)||(13937226-13937295)
chr5 (93-196)||(1840970-1841074)
chr5 (93-216)||(27195466-27195590)
chr5 (113-218)||(11136634-11136739)
chr5 (97-192)||(34720060-34720156)
chr5 (97-192)||(39408766-39408862)
chr5 (159-218)||(14501325-14501384)
chr5 (171-217)||(17198316-17198362)
chr5 (96-216)||(10493420-10493541)
chr5 (93-192)||(15931980-15932080)
chr5 (93-216)||(19283558-19283681)
chr5 (97-192)||(27450987-27451083)
[»] chr8 (4 HSPs)
chr8 (96-218)||(43966928-43967051)
chr8 (132-216)||(39477501-39477584)
chr8 (93-214)||(12377764-12377886)
chr8 (160-192)||(11161189-11161221)
[»] chr6 (6 HSPs)
chr6 (96-218)||(33109878-33110001)
chr6 (96-214)||(7957100-7957219)
chr6 (144-216)||(13311443-13311515)
chr6 (161-216)||(3082304-3082359)
chr6 (110-216)||(10346273-10346379)
chr6 (110-218)||(22295417-22295525)
[»] chr2 (10 HSPs)
chr2 (96-218)||(2647571-2647694)
chr2 (116-216)||(3409822-3409922)
chr2 (160-216)||(33830989-33831045)
chr2 (110-214)||(40675226-40675330)
chr2 (129-216)||(40458412-40458499)
chr2 (110-216)||(41958608-41958714)
chr2 (96-216)||(36538123-36538244)
chr2 (160-216)||(27633253-27633309)
chr2 (162-202)||(41331661-41331701)
chr2 (172-216)||(44741269-44741313)
[»] chr3 (11 HSPs)
chr3 (110-218)||(5418104-5418212)
chr3 (132-216)||(54432864-54432948)
chr3 (142-217)||(20661768-20661843)
chr3 (95-192)||(25252919-25253017)
chr3 (93-220)||(33895959-33896087)
chr3 (93-216)||(40942938-40943061)
chr3 (96-192)||(39471076-39471173)
chr3 (93-216)||(12710103-12710227)
chr3 (160-216)||(23206910-23206966)
chr3 (112-187)||(30740795-30740870)
chr3 (160-216)||(32688670-32688726)
[»] chr4 (23 HSPs)
chr4 (96-216)||(49820424-49820545)
chr4 (125-192)||(24009427-24009494)
chr4 (96-218)||(52705639-52705762)
chr4 (93-213)||(40797197-40797318)
chr4 (96-208)||(50711422-50711535)
chr4 (114-211)||(5769734-5769831)
chr4 (96-216)||(21436353-21436474)
chr4 (96-216)||(44377651-44377772)
chr4 (131-215)||(11055812-11055896)
chr4 (116-216)||(28266717-28266817)
chr4 (93-216)||(43386577-43386701)
chr4 (110-216)||(19850193-19850299)
chr4 (166-216)||(38791127-38791177)
chr4 (130-196)||(48151730-48151796)
chr4 (114-215)||(5765186-5765286)
chr4 (114-215)||(5767430-5767530)
chr4 (171-216)||(12673640-12673685)
chr4 (171-220)||(22720848-22720897)
chr4 (93-177)||(25133976-25134061)
chr4 (96-216)||(50605501-50605622)
chr4 (144-216)||(9222760-9222832)
chr4 (160-216)||(36543405-36543461)
chr4 (160-216)||(44792766-44792822)
[»] scaffold0025 (1 HSPs)
scaffold0025 (116-215)||(4745-4843)
[»] scaffold0444 (1 HSPs)
scaffold0444 (96-216)||(1386-1507)
[»] scaffold0135 (1 HSPs)
scaffold0135 (144-216)||(33413-33485)


Alignment Details
Target: scaffold0170 (Bit Score: 183; Significance: 1e-98; HSPs: 3)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 22 - 258
Target Start/End: Original strand, 4434 - 4672
Alignment:
Q  22 gcctataaattcaacctatttagttccctgcgagtagggctggaaatgagtggagttga-cgcatcaaagcacgactcgactcaataaga-ttggttcgg 119  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  4434 gcctataaattcaacctatttagttccccgcgagtagggctggaaatgagtggagttgaacgcatcaaagcacgactcgattcaataagaattggttcgg 4533  T
Q  120 cttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttcatta 219  Q
    || ||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4534 ctcgcaactcaactcgaattcaatacaaaccttttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttcatta 4633  T
Q  220 ggtttatttcggtagatcgaataacataattaaaaggcc 258  Q
    || ||| |||| |||||||||||||||||||||||||||    
T  4634 gggttagttcgctagatcgaataacataattaaaaggcc 4672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 342 - 491
Target Start/End: Original strand, 4680 - 4829
Alignment:
Q  342 tacaatcatatatttgctttacttcattatgtgcgttgtcgaatcgaatttcagttcattgcagacctacctgcgagcaaagtccttcccgaacaagtct 441  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4680 tacaatcatatatttgctttacttcattatgtgtgttgtcgaatcgaatttcagttcattgcagacctacctgcgagcaaagtccttcccgaacaagtct 4779  T
Q  442 actcaagagggcatattataacaaataatttaatgaagaacgtcattatc 491  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  4780 actcaagagggcatattataacaaataatttattgaagaacgtcgttatc 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 483 - 600
Target Start/End: Original strand, 4993 - 5110
Alignment:
Q  483 gtcattatcacaatatctatcctcgcatagaacattgaagttgctcgaaatcatcacacttatttcaagaatgacgacttgaggggttacggttctagac 582  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||     
T  4993 gtcatgatcacaatatctatcctcgcatagaacatagaagttgctcgaaatcatcacacttattccaagaatgacgacttgaggggttacacttctagat 5092  T
Q  583 tgctcaaaggcctatgct 600  Q
    |||| ||||| |||||||    
T  5093 tgctaaaaggtctatgct 5110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 45054839 - 45054962
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||||| ||| |||||||| ||||| |||||| ||||||  ||||||||||| ||||||||||||||||| | ||||    
T  45054839 ctcgactcgataagaattggttcggcttgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaac 45054938  T
Q  195 tcagtttgactcgttaggttcatt 218  Q
    || ||| | |||||||||||||||    
T  45054939 tcggttcggctcgttaggttcatt 45054962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 22074622 - 22074732
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||| ||| |||| ||||||||||||| | ||| ||||||||||| ||||| |||||||| ||| ||||||||    
T  22074622 attggttcggctcgaaactcgactcgagttcgatatgaactttttttatggctcaaattcggctcgtttaaaattcacgaacaactcggttcgactcgtt 22074721  T
Q  210 aggttcattag 220  Q
    ||||| |||||    
T  22074722 aggtttattag 22074732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 41449193 - 41449314
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| |||| |||||| | ||  |||||||||||| |||| ||| |||||| | |||||||||||||||||||||||||||| ||| ||    
T  41449193 ctcgactcgataagaattggctcggctcgaaattcgactcgaattcgatacaaaccttttttctagctcgagttcagctcgtttaaagttcacgaactac 41449292  T
Q  195 tcagtttgactcgttaggttca 216  Q
    || |||  ||||||||| ||||    
T  41449293 tcggttcaactcgttagattca 41449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 33899702 - 33899578
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| ||| ||||||| | ||| ||  |||  ||||| |||||| |||||| | |||||||||| ||||||||||||||||| |||    
T  33899702 cgactcgactcgataagaattgattcggctcgaaactcggttcgggttcaaaacgaaccttttttctagctcgagttcggctcgtttaaagttcacgaac 33899603  T
Q  192 aactcagtttgactcgttaggttca 216  Q
     |||| ||| |||||||||||||||    
T  33899602 cactcggttcgactcgttaggttca 33899578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 17026095 - 17025970
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaa-cattttttatggctcgagttcagctcgtttaaagttcacaaa 190  Q
    ||||||||||| |||||| ||||||||||| | ||| |||||||| ||  | ||||| | |||||| |  ||||||||| ||||||||||||||| | ||    
T  17026095 cgactcgactcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaatctttttttttaactcgagttcggctcgtttaaagttcgcgaa 17025996  T
Q  191 caactcagtttgactcgttaggttca 216  Q
    |||||| ||| |||||||||||||||    
T  17025995 caactcggttcgactcgttaggttca 17025970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 42071566 - 42071687
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    ||||||||||||||| ||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||| ||||||||||||||||| ||||      
T  42071566 ctcgactcaataagaattggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagt 42071665  T
Q  195 tcagtttgactcgttaggttca 216  Q
    || ||| |||||||||||||||    
T  42071666 tcggttcgactcgttaggttca 42071687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 11596490 - 11596403
Alignment:
Q  131 actcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttcatt 218  Q
    |||||| ||||| |||||| ||||||  ||||||| ||| ||||||||||||||||| | |||||| ||| | |||||||||||||||    
T  11596490 actcgagttcaaaacgaacctttttttgggctcgatttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttcatt 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 3931443 - 3931321
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaac-attttttatggctcgagttcagctcgtttaaagttcacaaacaa 193  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| | |||||| |||||||   |||||||||||||||||||||||||||| ||||     
T  3931443 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaactatttttttcagctcgagttcagctcgtttaaagttcacgaacag 3931344  T
Q  194 ctcagtttgactcgttaggttca 216  Q
     || ||| | |||||||||||||    
T  3931343 ttcggttcggctcgttaggttca 3931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 10618082 - 10618188
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||| | | ||| |||||||| | | ||| |||| |||||| |  || |||||| ||||||||||||||||| |||||||||||| | ||||||    
T  10618082 attggttcggttcgaaactcgactcgagtgcgatatgaaccttttttttaacttgagttcggctcgtttaaagttcacgaacaactcagttcgcctcgtt 10618181  T
Q  210 aggttca 216  Q
    |||||||    
T  10618182 aggttca 10618188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 23236876 - 23236775
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| || | |||||| | ||| |||||| |||||||||||||| |||||| | ||| |||||| ||||||||||||||||| ||| ||    
T  23236876 ctcgactcgataagaattagctcggctcgaaactcgactcaaattcaatacgaaccttttttctagcttgagttcggctcgtttaaagttcacgaactac 23236777  T
Q  195 tc 196  Q
    ||    
T  23236776 tc 23236775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 26215763 - 26215884
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| | ||||||  |||||    ||||||||| ||||||||||||||||| ||||      
T  26215763 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaactattttttcaactcgagttcggctcgtttaaagttcacgaacagt 26215862  T
Q  195 tcagtttgactcgttaggttca 216  Q
    || |||||||||||||||||||    
T  26215863 tcggtttgactcgttaggttca 26215884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 26719244 - 26719309
Alignment:
Q  151 ttttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||| | |||||||||| ||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  26719244 ttttttctagctcgagttcggctcgtttaaagttcacgaaccactcggttcgactcgttaggttca 26719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 18250743 - 18250619
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| ||||||||||| | |||  ||||||| ||  | |||||| |||| | |  ||||||||| ||||||||||||||||| |||    
T  18250743 cgactcgactcgataagaattggttcggctcgaaacttgactcgagtttgaaacgaaccttttctctaactcgagttcggctcgtttaaagttcacgaac 18250644  T
Q  192 aactcagtttgactcgttaggttca 216  Q
    |  || ||| |||||||||||||||    
T  18250643 agttcggttcgactcgttaggttca 18250619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 33124170 - 33124248
Alignment:
Q  131 actcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||| |||||||||||| ||| || |  ||||||||| ||||||||||||||||| |||||||| |||  |||||||    
T  33124170 actcgagttcaatacgaacctttcttttaactcgagttcggctcgtttaaagttcacgaacaactcggttcaactcgtt 33124248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 37333743 - 37333865
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaac-attttttatggctcgagttcagctcgtttaaagttcacaaacaa 193  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| ||| |||| |||||||   |||||||||| ||||||||||||||||| ||||     
T  37333743 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgatatgaactatttttttcagctcgagttcggctcgtttaaagttcacgaacag 37333842  T
Q  194 ctcagtttgactcgttaggttca 216  Q
     || ||| | |||||||||||||    
T  37333843 ttcggttcggctcgttaggttca 37333865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 8390196 - 8390111
Alignment:
Q  131 actcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| |||| ||| |||||  | |||||||||  |||||||||| |||||| |||||||| ||| | |||||||||||||    
T  8390196 actcgaattcgatacaaacctttttcttagctcgagtttggctcgtttaatgttcacgaacaactcggttcggctcgttaggttca 8390111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 8110870 - 8110902
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaaca 192  Q
    |||||||||||||||||||||||||||||||||    
T  8110870 gctcgagttcagctcgtttaaagttcacaaaca 8110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 35544194 - 35544142
Alignment:
Q  164 gagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||    
T  35544194 gagttcggctcgtttaaagttcacgaacagctcggtttggctcgttaggttca 35544142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 18740887 - 18740832
Alignment:
Q  161 ctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||  |||||||||||||||| |||||||| ||| | |||||||||||||    
T  18740887 ctcgagttcgactcgtttaaagttcacgaacaactcggttcggctcgttaggttca 18740832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 33172200 - 33172135
Alignment:
Q  131 actcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactc 196  Q
    ||||||||| ||||| ||| |||||| | ||||||||||  ||| |||||||||||||||| ||||    
T  33172200 actcgaatttaatacaaactttttttctagctcgagttctactcatttaaagttcacaaactactc 33172135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 43052328 - 43052449
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | |||  | ||||| ||| | ||||||  |||||   |||||||||| |||| |||||||||||| ||||      
T  43052328 ctcgactcgataagaattggttcggctcgaaacttggctcgagttcgacacgaactattttttcagctcgagttcggctcatttaaagttcacgaacagt 43052427  T
Q  195 tcagtttgactcgttaggttca 216  Q
    |||||| | |||||||||||||    
T  43052428 tcagttcggctcgttaggttca 43052449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 45174732 - 45174781
Alignment:
Q  167 ttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    ||||||||||||||||||||| ||||| || ||| | |||||||||||||    
T  45174732 ttcagctcgtttaaagttcacgaacaattcggttcggctcgttaggttca 45174781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 46574284 - 46574231
Alignment:
Q  161 ctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggtt 214  Q
    ||||||||| ||||||||||||||| | |||||||| ||| | |||||||||||    
T  46574284 ctcgagttcggctcgtttaaagttcgcgaacaactcggttcggctcgttaggtt 46574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 388526 - 388582
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| | |||||||||||||    
T  388526 gctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttca 388582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 5776594 - 5776538
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||| ||||| ||||| || ||| | |||||||||||||    
T  5776594 gctcgagttcggctcgtttaaaattcacgaacaattcggttcggctcgttaggttca 5776538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 7443940 - 7443996
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    ||||||||||||||||||||| |||||| ||||  || ||||| || ||||||||||    
T  7443940 gctcgagttcagctcgtttaatgttcacgaacagttcggtttggcttgttaggttca 7443996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 20400283 - 20400339
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||  ||||||||||||||||| || |  || |||||||||||||||||||    
T  20400283 gctcgagtttggctcgtttaaagttcacgaatagttcggtttgactcgttaggttca 20400339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 43090111 - 43090003
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||||| |||||||||||||  ||||||||||| ||||||||||||||||| | |||||| ||| | ||||||    
T  43090111 attggttcggctcgaaactcgactcgagttcaaaacgaacatttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgtt 43090012  T
Q  210 aggttcatt 218  Q
    |||||||||    
T  43090011 aggttcatt 43090003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 7955692 - 7955816
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    |||||||||||||||||| ||||||||||| | ||| ||  |||| ||| | |||||  |||||| | |||||||||| ||||||||||||||||| |||    
T  7955692 cgactcgactcaataagaattggttcggctcgaaactcggttcgagttcgaaacgaatcttttttctagctcgagttcggctcgtttaaagttcacgaac 7955791  T
Q  192 aactcagtttgactcgttaggttca 216  Q
     |||  ||| |||||||||||||||    
T  7955792 cacttggttcgactcgttaggttca 7955816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 15257941 - 15257819
Alignment:
Q  95 actcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaa 193  Q
    ||||||||| |||||| ||||||||||| | ||| ||  |||| ||| | ||||||  ||||| | |||||||||| ||||||||||||||||| ||| |    
T  15257941 actcgactcgataagaattggttcggctcgaaactcggttcgagttcgaaacgaaccatttttctagctcgagttcggctcgtttaaagttcacgaacca 15257842  T
Q  194 ctcagtttgactcgttaggttca 216  Q
    ||| ||| |||||||||||||||    
T  15257841 ctcggttcgactcgttaggttca 15257819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 24575361 - 24575467
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||  | |||||| |||||| |  ||||||||| ||||||||||||||||| |||||||| ||| | ||||||    
T  24575361 attggttcggctcgaaactcgactcgagtttgaaacgaactttttttttaactcgagttcggctcgtttaaagttcacgaacaactcggttcggctcgtt 24575460  T
Q  210 aggttca 216  Q
    |||||||    
T  24575461 aggttca 24575467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 47982707 - 47982823
Alignment:
Q  96 ctcgactcaataagatt-ggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||||| |||| | ||||||| | | ||| |||||||| ||||| ||||||||||||| |  ||||||||    ||||||||||||||||||||||    
T  47982707 ctcgactcaacaagaatcggttcggttcgaaactcgactcgagttcaaaacgaacatttttt-taactcgagtttgattcgtttaaagttcacaaacaac 47982805  T
Q  195 tcagtttgactcgttagg 212  Q
    || ||| |||||||||||    
T  47982806 tcggttcgactcgttagg 47982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 3577050 - 3577099
Alignment:
Q  161 ctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtta 210  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||| |||||    
T  3577050 ctcgagttcggctcgtttaaagttcacgaacaactcagttcgacccgtta 3577099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 29678200 - 29678080
Alignment:
Q  94 gactcgactcaataagat-tggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    |||||||||| ||||||  |||||||||| | ||| |||||| | ||| | |||||| ||||||    ||||||||| ||||||||||||||||| | ||    
T  29678200 gactcgactcgataagaaatggttcggctcgaaactcgactcaagttcgaaacgaacctttttttcatctcgagttcggctcgtttaaagttcacgagca 29678101  T
Q  193 actcagtttgactcgttaggt 213  Q
    |||| ||| | ||||||||||    
T  29678100 actctgttcggctcgttaggt 29678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 37441907 - 37441788
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||| ||||||||||||||||| ||||      
T  37441907 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagt 37441808  T
Q  195 tcagtttgactcgttaggtt 214  Q
    || ||| | |||||||||||    
T  37441807 tcggttcggctcgttaggtt 37441788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 40160346 - 40160277
Alignment:
Q  147 aacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| |  || |||||| | ||||||||||||||| ||| |||| ||| |||||||||||||||    
T  40160346 aacattttttctaacttgagttcggttcgtttaaagttcacgaaccactcggttcgactcgttaggttca 40160277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 15305925 - 15306041
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    |||||||||||||||||| |||  ||||||   ||| |||||||| ||  ||||||||  ||||  || ||| ||||| ||||||||||||||||| ||     
T  15305925 cgactcgactcaataagaattgactcggctcaaaactcgactcgagtttgatacgaaccattttcttgactcaagttcggctcgtttaaagttcacgaaa 15306024  T
Q  192 aactcagtttgactcgt 208  Q
    ||||| ||| |||||||    
T  15306025 aactcggttcgactcgt 15306041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 19508001 - 19508053
Alignment:
Q  144 acgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactc 196  Q
    |||||| ||||||  ||||||||||  ||||||||||||||||||| ||||||    
T  19508001 acgaacctttttttgggctcgagtttggctcgtttaaagttcacaagcaactc 19508053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 24470555 - 24470499
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| | |||||||||||||    
T  24470555 gctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttca 24470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 4984059 - 4983936
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||| ||||| ||| |||||||| ||||| |||||| ||||||  ||||||||||| ||||||||||||||||| | ||||    
T  4984059 ctcgactcgataagaattggttcagcttgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaac 4983960  T
Q  195 tcagtttgactcgttaggttcatt 218  Q
    || ||| | |||||||||||||||    
T  4983959 tcggttcggctcgttaggttcatt 4983936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 41782755 - 41782863
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||||| |||||| ||||||  ||||||||||| ||||||||||||||||| | |||||| ||| | ||||||    
T  41782755 attggttcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgtt 41782854  T
Q  210 aggttcatt 218  Q
    |||||||||    
T  41782855 aggttcatt 41782863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 26217470 - 26217592
Alignment:
Q  97 tcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaact 195  Q
    |||||||||||||| ||||||||||| | ||| |||||||| ||||| |||||| ||||||  ||||| ||||| ||||||||||||||||| |  ||||    
T  26217470 tcgactcaataagaattggttcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctccagttcggctcgtttaaagttcacgagaaact 26217569  T
Q  196 cagtttgactcgttaggttcatt 218  Q
    | ||| |  ||||||||||||||    
T  26217570 cggttcggttcgttaggttcatt 26217592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 13937295 - 13937226
Alignment:
Q  147 aacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| | |||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||    
T  13937295 aacattttttctagctcgagttcggctcgtttaaagttcacaaaccactcggttcgactcgttaggttca 13937226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 1841074 - 1840970
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| ||||||||||| | ||| |||||||| ||| ||||||||  ||||| |  ||||||||| ||||||||||||||||| |||    
T  1841074 cgactcgactcgataagaattggttcggctcgaaactcgactcgagttcgatacgaaccctttttttaactcgagttcggctcgtttaaagttcacgaac 1840975  T
Q  192 aactc 196  Q
    |||||    
T  1840974 aactc 1840970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 27195466 - 27195590
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    |||||||||||||||||| ||||||||||| | ||| | |||||| ||  | |||||| |||| | |  ||||||||| ||||||||||||||||| |||    
T  27195466 cgactcgactcaataagaattggttcggctcgaaactctactcgagtttgaaacgaaccttttctctaactcgagttcggctcgtttaaagttcacgaac 27195565  T
Q  192 aactcagtttgactcgttaggttca 216  Q
    | ||| |||||| ||||||||||||    
T  27195566 agctcggtttgattcgttaggttca 27195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 11136739 - 11136634
Alignment:
Q  113 ggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttagg 212  Q
    ||||||||| | ||| |||||||| ||||| |||||| ||||||  |||||||| || | ||||||||||||||| | |||||| ||| | |||||||||    
T  11136739 ggttcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgagctcggttcgtttaaagttcacgagcaactcggttcggctcgttagg 11136640  T
Q  213 ttcatt 218  Q
    ||||||    
T  11136639 ttcatt 11136634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 34720156 - 34720060
Alignment:
Q  97 tcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    ||||||| |||||| ||||||||| | | ||| |||||||| ||| |  ||||| ||||||   |||||||||||||||||||||||||||| ||||    
T  34720156 tcgactcgataagaattggttcggttcgaaactcgactcgagttcgaagcgaacttttttttaagctcgagttcagctcgtttaaagttcacgaaca 34720060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 39408766 - 39408862
Alignment:
Q  97 tcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    ||||||| |||||| ||||||||||| | ||| |||||||| ||| |  ||||| ||||||   |||||||||| ||||||||||||||||| ||||    
T  39408766 tcgactcgataagaattggttcggctcgaaactcgactcgagttcgaagcgaacttttttttaagctcgagttcggctcgtttaaagttcacgaaca 39408862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 14501384 - 14501325
Alignment:
Q  159 ggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttcatt 218  Q
    ||||||||||| ||||||||||||||||| | |||||| ||| | ||||||| |||||||    
T  14501384 ggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaagttcatt 14501325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 17198316 - 17198362
Alignment:
Q  171 gctcgtttaaagttcacaaacaactcagtttgactcgttaggttcat 217  Q
    |||||||||||||||||||||||||| |||   ||||||||||||||    
T  17198316 gctcgtttaaagttcacaaacaactcggttcagctcgttaggttcat 17198362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 10493420 - 10493541
Alignment:
Q  96 ctcgactcaataagat-tggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| ||||||  |||||||||| | ||| |||||||| ||| | |||||| ||||||    ||| ||||| ||||||||||||||||| | ||||    
T  10493420 ctcgactcgataagaaatggttcggctcgaaactcgactcgagttcgaaacgaacctttttttcaactcaagttcggctcgtttaaagttcacgagcaac 10493519  T
Q  195 tcagtttgactcgttaggttca 216  Q
    ||  || ||||| |||||||||    
T  10493520 tcgattcgactcattaggttca 10493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 15931980 - 15932080
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| ||||||| ||||| ||| ||  |||| ||||| ||||||  |||||  | ||||||||| | ||||||||||||||| |||    
T  15931980 cgactcgactcgataagaattggttcagcttgaaactcggttcgagttcaacacgaactcttttttcgactcgagttcggttcgtttaaagttcacgaac 15932079  T
Q  192 a 192  Q
    |    
T  15932080 a 15932080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 19283681 - 19283558
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| ||||||  ||| | ||| |||||||| ||| |||||||| |||||| |  |||||||||  ||  |||||||||||| |||    
T  19283681 cgactcgactcgataagaattggtttagctcgaaactcgactcgagttcgatacgaacctttttt-taactcgagttctactgatttaaagttcacgaac 19283583  T
Q  192 aactcagtttgactcgttaggttca 216  Q
    ||||| ||| ||||| |||| ||||    
T  19283582 aactcggttcgactcattagattca 19283558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 27451083 - 27450987
Alignment:
Q  97 tcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    ||||||| |||||| ||||||||||| | ||| | |||||| ||| |  ||||||||||||    ||||||||| ||||||||||||||||| ||||    
T  27451083 tcgactcgataagaattggttcggctcgaaactcaactcgagttcgaagcgaacatttttttaaactcgagttcggctcgtttaaagttcacgaaca 27450987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 43966928 - 43967051
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| |||||||| ||||| |||||  ||||||  ||||||||||| ||||||||||||||||| | ||||    
T  43966928 ctcgactcgataagaattggttcggctcgaaactcgactcgagttcaaaacgaatttttttttgggctcgagttcggctcgtttaaagttcacgagcaac 43967027  T
Q  195 tcagtttgactcgttaggttcatt 218  Q
    || ||| | |||||||||||||||    
T  43967028 tcggttcggctcgttaggttcatt 43967051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 39477501 - 39477584
Alignment:
Q  132 ctcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    ||||||||| | ||||||||||||  | |||||||||| ||| ||||||||||||| ||| |||||||| |||||||||||||||    
T  39477501 ctcgaattcgaaacgaacatttttc-tagctcgagttcggcttgtttaaagttcacgaaccactcagttcgactcgttaggttca 39477584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 12377764 - 12377886
Alignment:
Q  93 cgactcgactcaataagattg-gttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    |||||||| || |||||| || |||| ||| | ||| |||||||| ||| | ||||||  ||||| |  |||||||||| ||||||||||||||||||||    
T  12377764 cgactcgattcgataagaatgtgttcagctcgaaactcgactcgagttcgaaacgaactatttttttaactcgagttcatctcgtttaaagttcacaaac 12377863  T
Q  192 aactcagtttgactcgttaggtt 214  Q
    ||||| |||  |||| |||||||    
T  12377864 aactcggttccactcattaggtt 12377886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 11161189 - 11161221
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaaca 192  Q
    |||||||||||||||||||||||||||| ||||    
T  11161189 gctcgagttcagctcgtttaaagttcacgaaca 11161221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 33109878 - 33110001
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| |||||||| ||||| |||||| ||||||  ||||||||||| ||||||||||||||||  | ||||    
T  33109878 ctcgactcgataagaattggttcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcatgagcaac 33109977  T
Q  195 tcagtttgactcgttaggttcatt 218  Q
    ||  |||| |||||||||||||||    
T  33109978 tcgatttggctcgttaggttcatt 33110001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 7957100 - 7957219
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||||| ||||||  |||||   |||||||||||||||||||||||||||| ||||      
T  7957100 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcaacacgaactattttttcagctcgagttcagctcgtttaaagttcacgaacagt 7957199  T
Q  195 tcagtttgactcgttaggtt 214  Q
    || ||| | |||||||||||    
T  7957200 tcggttcggctcgttaggtt 7957219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 13311443 - 13311515
Alignment:
Q  144 acgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||| |||||| | |||||||||| ||||||||||||||||| ||| ||||  || |||||||||||||||    
T  13311443 acgaaccttttttctagctcgagttcggctcgtttaaagttcacgaaccactcgattcgactcgttaggttca 13311515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 3082359 - 3082304
Alignment:
Q  161 ctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||  ||||||| |||||||| | |||||||||| |||||||||||||||    
T  3082359 ctcgagttcgactcgttttaagttcacgagcaactcagttcgactcgttaggttca 3082304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 10346273 - 10346379
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||| ||||||||||||||||| ||||  || ||| | ||||||    
T  10346273 attggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgtt 10346372  T
Q  210 aggttca 216  Q
    |||||||    
T  10346373 aggttca 10346379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 22295417 - 22295525
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||| | || ||| ||||||  ||||||||||| |||| |||||| ||||| | |||||| |||   ||||||    
T  22295417 attggttcggctcgaaactcgactcgagttcgaaacaaactttttttccggctcgagttcggctcatttaaaattcacgagcaactcggttcagctcgtt 22295516  T
Q  210 aggttcatt 218  Q
    || ||||||    
T  22295517 agattcatt 22295525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 2647694 - 2647571
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| |||||||| ||||| || ||| ||||||  ||||||||||| ||||||||||||||||| | ||||    
T  2647694 ctcgactcgataagaattggttcggctcgaaactcgactcgagttcaaaaccaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaac 2647595  T
Q  195 tcagtttgactcgttaggttcatt 218  Q
    || ||| | |||||||||||||||    
T  2647594 tcggttcggctcgttaggttcatt 2647571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 3409922 - 3409822
Alignment:
Q  116 tcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttc 215  Q
    |||||||| ||| |||||||| ||| |||||||| |||||| |  ||||||||| ||||||||||||||||| ||| |||| |||  | |||||||||||    
T  3409922 tcggcttgaaactcgactcgagttcgatacgaaccttttttttaactcgagttcggctcgtttaaagttcacgaactactcggttcaaatcgttaggttc 3409823  T
Q  216 a 216  Q
    |    
T  3409822 a 3409822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 33830989 - 33831045
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||| || ||| | |||||||||||||    
T  33830989 gctcgagttcggctcgtttaaagttcacgaacaattcggttcggctcgttaggttca 33831045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 40675226 - 40675330
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||| ||||||||  ||||| |  ||| | ||  |||||||||||||||||||||||||| ||| | |||| |    
T  40675226 attggttcggctcgaaactcgactcgagttcgatacgaaccatttttttaactcaaatttggctcgtttaaagttcacaaacaactcggttcggctcgat 40675325  T
Q  210 aggtt 214  Q
    |||||    
T  40675326 aggtt 40675330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 40458412 - 40458499
Alignment:
Q  129 cgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||| ||| | |||||||||||||    ||||||||| ||||||||||| ||||| | ||| || ||| |||||||||||||||    
T  40458412 cgactcgagttcgaaacgaacatttttttcaactcgagttcggctcgtttaaaattcacgagcaattcggttcgactcgttaggttca 40458499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 41958608 - 41958714
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||| ||||||||||||||||| ||||  || ||| | ||||||    
T  41958608 attggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgtt 41958707  T
Q  210 aggttca 216  Q
    |||||||    
T  41958708 aggttca 41958714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 36538123 - 36538244
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||  ||||||||||||||||| ||||      
T  36538123 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagtttggctcgtttaaagttcacgaacagt 36538222  T
Q  195 tcagtttgactcgttaggttca 216  Q
    || ||| | |||||||||||||    
T  36538223 tcggttcggctcgttaggttca 36538244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 27633253 - 27633309
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| | |||||||||||||    
T  27633253 gctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttca 27633309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 41331661 - 41331701
Alignment:
Q  162 tcgagttcagctcgtttaaagttcacaaacaactcagtttg 202  Q
    |||||||| | |||||||||||||||||||||||| |||||    
T  41331661 tcgagttcggttcgtttaaagttcacaaacaactcggtttg 41331701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 44741313 - 44741269
Alignment:
Q  172 ctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||||||||| ||||  || |||||||||||||||||||    
T  44741313 ctcgtttaaagttcacgaacagttcggtttgactcgttaggttca 44741269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 5418104 - 5418212
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| |||||||| ||||| |||||| ||||||  ||||||| ||||||||||||||||||||| | |||||| ||| | ||||||    
T  5418104 attggttcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgatttcagctcgtttaaagttcacgagcaactcggttcggctcgtt 5418203  T
Q  210 aggttcatt 218  Q
    || ||||||    
T  5418204 agattcatt 5418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 54432948 - 54432864
Alignment:
Q  132 ctcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    ||||| ||||| |||||| |||||| | |||||||||| ||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  54432948 ctcgagttcaaaacgaaccttttttttagctcgagttcggctcgtttaaaattcacgaacaactcggttcgactcgttaggttca 54432864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 20661768 - 20661843
Alignment:
Q  142 atacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttcat 217  Q
    |||| ||| ||||||| || |||||||||||||||||||||||||| |||||||| ||| | ||||||||||||||    
T  20661768 atacaaaccttttttaaggttcgagttcagctcgtttaaagttcacgaacaactcggttcggctcgttaggttcat 20661843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 25252919 - 25253017
Alignment:
Q  95 actcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    ||||||||| |||||| |||||||||||   ||| |||||||| |||||||||||| |||| |   |||||||||| ||||||||||||||||| ||||    
T  25252919 actcgactcgataagaattggttcggctcaaaactcgactcgagttcaatacgaactttttgttaagctcgagttcggctcgtttaaagttcacgaaca 25253017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 33895959 - 33896087
Alignment:
Q  93 cgactcgactcaataagat-tggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||||||||||  |||||| |||   ||| |||||||| ||| | |||||| |||||| | |||||| ||| ||||||||||||||||| |||    
T  33895959 cgactcgactcaataagaaatggttcagctccaaactcgactcgagttcgacacgaaccttttttttagctcgaattcggctcgtttaaagttcacgaac 33896058  T
Q  192 aactcagtttgactcgttaggttcattag 220  Q
    | |||  || |||| | ||||||||||||    
T  33896059 agctcgattcgacttgataggttcattag 33896087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 40942938 - 40943061
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    |||||| |||| |||||| |||||||| || | ||| || ||||| ||||| |||||| |||||  | |||||||||| |||| |||||||||||| |||    
T  40942938 cgactcaactcgataagaattggttcgactcgaaactcggctcgagttcaaaacgaacctttttc-tagctcgagttcggctcatttaaagttcacgaac 40943036  T
Q  192 aactcagtttgactcgttaggttca 216  Q
     |||| ||| |||||||||||||||    
T  40943037 cactcggttcgactcgttaggttca 40943061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 39471173 - 39471076
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||||||||||||||||||||| ||||    
T  39471173 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcagctcgtttaaagttcacgaaca 39471076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 12710103 - 12710227
Alignment:
Q  93 cgactcgactcaataagattggttcggcttgcaacccgactcgaattcaatacgaacattttttatgg-ctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| | | |||||| | ||| |||||||| ||  | |||||| |||||| |   ||||||||| ||||||||||||||| | |||    
T  12710103 cgactcgactcgataagaattggtcggctcgaaactcgactcgagtttgaaacgaaccttttttcttaactcgagttcggctcgtttaaagttcgcgaac 12710202  T
Q  192 aactcagtttgactcgttaggttca 216  Q
    ||||| ||| | |||||||||||||    
T  12710203 aactcggttcggctcgttaggttca 12710227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 23206966 - 23206910
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| |||||||||||||||    
T  23206966 gctcgagttcggctcgtttaaagttcacgaacagttcggttcgactcgttaggttca 23206910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 30740795 - 30740870
Alignment:
Q  112 tggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcac 187  Q
    ||||| |||| | ||| |||||||| ||| | |||||| |||||| | |||||||||| |||||||||||||||||    
T  30740795 tggtttggctcgaaactcgactcgagttcgacacgaaccttttttttagctcgagttcggctcgtttaaagttcac 30740870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 32688670 - 32688726
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| | |||||||||||||    
T  32688670 gctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttca 32688726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 49820424 - 49820545
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| |||||||| ||| | ||||||  |||||   |||||||||| ||||||||||||||||| ||||      
T  49820424 ctcgactcgataagaattggttcggctcgaaactcgactcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagt 49820523  T
Q  195 tcagtttgactcgttaggttca 216  Q
    |||||| | |||||||||||||    
T  49820524 tcagttcggctcgttaggttca 49820545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 24009494 - 24009427
Alignment:
Q  125 aacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaaca 192  Q
    |||||||||||| ||||| |||||| |||||| | |||||||||| ||||||||||||||||| ||||    
T  24009494 aacccgactcgagttcaaaacgaaccttttttttagctcgagttctgctcgtttaaagttcacgaaca 24009427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 52705639 - 52705762
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| ||| |||| || || | |||| ||||||  ||||||||||| |||||||||||||| || | ||||    
T  52705639 ctcgactcgataagaattggttcggctcgaaactcgattcgagtttaaaatgaacctttttttgggctcgagttcggctcgtttaaagtttacgagcaac 52705738  T
Q  195 tcagtttgactcgttaggttcatt 218  Q
    || ||| | |||||||||||||||    
T  52705739 tcggttcggctcgttaggttcatt 52705762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 40797197 - 40797318
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| ||||||||||| | |||  | ||||| ||||  |||||| | |||| |  ||||||||| | ||||||||||||||| |||    
T  40797197 cgactcgactcgataagaattggttcggctcgaaacatggctcgagttcacaacgaacctcttttctaactcgagttcgggtcgtttaaagttcacgaac 40797296  T
Q  192 aactcagtttgactcgttaggt 213  Q
     |||||||| ||||||||||||    
T  40797297 cactcagttcgactcgttaggt 40797318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 50711535 - 50711422
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| |||||||||||   ||| ||  |||| ||||| |||||  |||||| | |||||||||| ||||||||||||||||||||| ||    
T  50711535 ctcgactcgataagaattggttcggctcaaaactcggttcgagttcaaaacgaatcttttttctagctcgagttcggctcgtttaaagttcacaaaccac 50711436  T
Q  195 tcagtttgactcgt 208  Q
    || ||| |||||||    
T  50711435 tcggttcgactcgt 50711422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 5769831 - 5769734
Alignment:
Q  114 gttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttag 211  Q
    |||||||| | ||| |||||||||||| ||||||||  ||||| |||||  |||||  ||| || ||||||||  |||||||||||| ||||||||||    
T  5769831 gttcggctcgaaactcgactcgaattcgatacgaactatttttttggcttaagttcgactcattaaaagttcatgaacaactcagttcgactcgttag 5769734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 21436353 - 21436474
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||| ||||||| | ||| || ||||||||| | ||| ||  |||||   |||||||||| ||||||||||||||||| ||||      
T  21436353 ctcgactcgataagaattgattcggctcgaaactcggctcgaattcgacacggactattttttcagctcgagttcggctcgtttaaagttcacgaacagt 21436452  T
Q  195 tcagtttgactcgttaggttca 216  Q
    || ||||| |||||||||||||    
T  21436453 tcggtttggctcgttaggttca 21436474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 44377651 - 44377772
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| |||||||| ||  | |||||| |||| | |  || |||||| ||||||||||||||||| ||||||    
T  44377651 ctcgactcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaaccttttctctaacttgagttcggctcgtttaaagttcacgaacaac 44377750  T
Q  195 tcagtttgactcgttaggttca 216  Q
    |  ||| | |||||||||||||    
T  44377751 ttggttcggctcgttaggttca 44377772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 11055896 - 11055812
Alignment:
Q  131 actcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttc 215  Q
    |||||| ||| ||||||||  ||||  || |||||||||||||| |||||||||||| |||||||| ||| | ||||| ||||||    
T  11055896 actcgagttcgatacgaaccattttcttgactcgagttcagctcatttaaagttcacgaacaactcggttcggctcgtaaggttc 11055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 28266817 - 28266717
Alignment:
Q  116 tcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttc 215  Q
    |||||| | ||| |||||||| ||| | ||||||  ||||| | ||||||||||  |||||||||||||||| ||||  || ||| ||||||||||||||    
T  28266817 tcggctcgaaactcgactcgagttcgacacgaactctttttttagctcgagttcgactcgtttaaagttcacgaacagttcggttcgactcgttaggttc 28266718  T
Q  216 a 216  Q
    |    
T  28266717 a 28266717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 43386577 - 43386701
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaac 191  Q
    ||||||||||| |||||| || | |||||||| ||| |||||||| ||| | ||||||  |||||   |||||| |||  |||||||||||||||| |||    
T  43386577 cgactcgactcgataagaatttgctcggcttgaaactcgactcgagttcgacacgaactcttttttcagctcgaattcgactcgtttaaagttcacgaac 43386676  T
Q  192 aactcagtttgactcgttaggttca 216  Q
    |  || ||| |||||||||||||||    
T  43386677 agttcggttcgactcgttaggttca 43386701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 19850193 - 19850299
Alignment:
Q  110 attggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgtt 209  Q
    |||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||| ||||||||||||||||| ||||  || ||| | ||||||    
T  19850193 attggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgtt 19850292  T
Q  210 aggttca 216  Q
    |||||||    
T  19850293 aggttca 19850299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 38791127 - 38791177
Alignment:
Q  166 gttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||||||||||||||| ||||||||| |||  ||| |||||||||    
T  38791127 gttcagctcgtttaaagttcacgaacaactcaatttcgctcattaggttca 38791177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 48151796 - 48151730
Alignment:
Q  130 gactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactc 196  Q
    |||||||||||||||||||| |||||  |  |||||||||  |||||||||||||||| ||| ||||    
T  48151796 gactcgaattcaatacgaacctttttcctaactcgagttcgactcgtttaaagttcacgaactactc 48151730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 5765286 - 5765186
Alignment:
Q  114 gttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggt 213  Q
    |||||||| | ||| |||||||||||| ||| ||||  ||||| |||||  |||||  ||| || ||||||||  |||||||||||| ||||||||||||    
T  5765286 gttcggctcgaaactcgactcgaattcgatatgaactattttt-tggcttaagttcgactcattaaaagttcatgaacaactcagttcgactcgttaggt 5765188  T
Q  214 tc 215  Q
    ||    
T  5765187 tc 5765186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 5767530 - 5767430
Alignment:
Q  114 gttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggt 213  Q
    |||||||| | ||| |||||||||||| ||| ||||  ||||| |||||  |||||  ||| || ||||||||  |||||||||||| ||||||||||||    
T  5767530 gttcggctcgaaactcgactcgaattcgatatgaactattttt-tggcttaagttcgactcattaaaagttcatgaacaactcagttcgactcgttaggt 5767432  T
Q  214 tc 215  Q
    ||    
T  5767431 tc 5767430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 12673685 - 12673640
Alignment:
Q  171 gctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    ||||||||||||||| | |||||||| ||| |||||||||||||||    
T  12673685 gctcgtttaaagttcgcgaacaactcggttcgactcgttaggttca 12673640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 22720848 - 22720897
Alignment:
Q  171 gctcgtttaaagttcacaaacaactcagtttgactcgttaggttcattag 220  Q
    ||||||||||||||||||| |||||| |||  ||||||||| ||||||||    
T  22720848 gctcgtttaaagttcacaagcaactcggttcaactcgttagattcattag 22720897  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 25133976 - 25134061
Alignment:
Q  93 cgactcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtt 177  Q
    ||||||||||| |||||| ||||||||||| | ||||||  |||| ||| | ||||||||||||| | |||| ||||| |||||||    
T  25133976 cgactcgactcgataagaattggttcggctcgaaacccggttcgagttcgaaacgaacattttttctagctcaagttcggctcgtt 25134061  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 50605501 - 50605622
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| || ||||| ||| | ||||||  |||||   |||||||||| ||| ||||||||||||| ||||      
T  50605501 ctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggcttgtttaaagttcacgaacagt 50605600  T
Q  195 tcagtttgactcgttaggttca 216  Q
    || ||| | |||||||||||||    
T  50605601 tcggttcggctcgttaggttca 50605622  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 9222832 - 9222760
Alignment:
Q  144 acgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||| |||||| | |||||||||| ||| ||||||||||||  ||| |||| ||| ||||| |||||||||    
T  9222832 acgaaccttttttttagctcgagttcggcttgtttaaagttcatgaaccactcggttcgactcattaggttca 9222760  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 36543405 - 36543461
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| | |||||||||||||    
T  36543405 gctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttca 36543461  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 44792822 - 44792766
Alignment:
Q  160 gctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||||||| ||||||||||||||||| ||||  || ||| | |||||||||||||    
T  44792822 gctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttca 44792766  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 4745 - 4843
Alignment:
Q  116 tcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttc 215  Q
    |||||| | ||| |||||||| ||| ||||||||  ||||| || ||| ||||| |||||||||||||||||  ||||||||||| | ||||||||||||    
T  4745 tcggctcgaaactcgactcgagttcgatacgaaccatttttttgactcaagttcggctcgtttaaagttcac-tacaactcagttcggctcgttaggttc 4843  T

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Target: scaffold0444 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 1507 - 1386
Alignment:
Q  96 ctcgactcaataaga-ttggttcggcttgcaacccgactcgaattcaatacgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaac 194  Q
    |||||||| |||||| ||||||||||| | ||| |||||||| ||  | |||||| |||| | |  || |||||| ||||||||||||||||| ||||||    
T  1507 ctcgactcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaaccttttctctaacttgagttcggctcgtttaaagttcacgaacaac 1408  T
Q  195 tcagtttgactcgttaggttca 216  Q
    |  ||| | |||||||||||||    
T  1407 ttggttcggctcgttaggttca 1386  T

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Target: scaffold0135 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 33485 - 33413
Alignment:
Q  144 acgaacattttttatggctcgagttcagctcgtttaaagttcacaaacaactcagtttgactcgttaggttca 216  Q
    |||||| |||||| | |||||||||| ||| ||||||||||||  ||| |||| ||| ||||| |||||||||    
T  33485 acgaaccttttttttagctcgagttcggcttgtttaaagttcatgaaccactcggttcgactcattaggttca 33413  T

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