View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1272_high_23 (Length: 443)

Name: NF1272_high_23
Description: NF1272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1272_high_23
NF1272_high_23
[»] chr6 (11 HSPs)
chr6 (5-293)||(11170952-11171240)
chr6 (1-243)||(11209770-11210012)
chr6 (1-231)||(11276332-11276562)
chr6 (1-226)||(11197101-11197326)
chr6 (1-246)||(11156648-11156895)
chr6 (1-226)||(11241005-11241236)
chr6 (1-125)||(11161527-11161651)
chr6 (1-125)||(11200270-11200394)
chr6 (1-222)||(11133372-11133593)
chr6 (363-433)||(11171312-11171382)
chr6 (380-425)||(8382104-8382149)
[»] scaffold1207 (1 HSPs)
scaffold1207 (1-292)||(1263-1538)
[»] scaffold0734 (2 HSPs)
scaffold0734 (372-426)||(1908-1962)
scaffold0734 (189-243)||(6714-6770)
[»] chr7 (7 HSPs)
chr7 (367-426)||(2407345-2407404)
chr7 (380-426)||(7875716-7875762)
chr7 (366-426)||(40352657-40352717)
chr7 (380-422)||(41415672-41415714)
chr7 (108-217)||(3147757-3147866)
chr7 (100-159)||(8647354-8647410)
chr7 (100-170)||(8640170-8640237)
[»] chr5 (1 HSPs)
chr5 (380-424)||(5003527-5003571)
[»] chr1 (2 HSPs)
chr1 (100-158)||(15595516-15595571)
chr1 (381-426)||(33096059-33096104)
[»] chr8 (1 HSPs)
chr8 (380-426)||(18896459-18896505)


Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 11170952 - 11171240
Alignment:
Q  5 ttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagttaac 104  Q
    ||||||||||| | | ||| |||||||||  ||||||  |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11170952 ttgatccaaggaaggtttctgctatctcgcgcattttcaccaataccatggatgagatttcttcagcagcaaaatgtttttcctcgtcattatagttaac 11171051  T
Q  105 aacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagc 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  11171052 aacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaattagc 11171151  T
Q  205 ctctttgcatctacaaaacaaaagagagttgtgtacactatgnnnnnnnnttggatcgctttatgaattaatcattctatgtggatttg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  11171152 ctctttgcatctacaaaacaaaagagagttgtgtacactatgaaaaacaattggatcgctttatgaattaatcattctatgtggatttg 11171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 11209770 - 11210012
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    ||||||||||||||| | ||||| ||| ||||   |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  11209770 actgttgatccaaggaaggcttctgctgtctctcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtctttatagt 11209869  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaat 200  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  11209870 taacaacaatcatgggtttgtcatttaggtcgccaattactttgaatggccacaacttcacatcactttctactatggggtcgcaaaatttccgaccaat 11209969  T
Q  201 tagcctctttgcatctacaaaacaaaagagagttgtgtacact 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11209970 tagcctctttgcatctacaaaacaaaagagagttgtgtacact 11210012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 11276332 - 11276562
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    |||||| |||||||| | ||||| |||||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  11276332 actgttaatccaaggaaggcttctgctatctcgcgcattttcgccaataccatggatgagatttcttcagcagtaaaatgcttttcctcgtcattatagt 11276431  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  11276432 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaat 11276531  T
Q  201 tagcctctttgcatctacaaaacaaaagaga 231  Q
    |||||||||||||||||||||||||||||||    
T  11276532 tagcctctttgcatctacaaaacaaaagaga 11276562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 11197101 - 11197326
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11197101 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 11197200  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaat 200  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||||| |||||||||||| || |  |||||||| |||| ||||||    
T  11197201 taacaacaatcatgggtttgtcattgaggtcgccaattactttgaagggccacgacttcatatcactttgtacgattgagtcgcaaaacttcctaccaat 11197300  T
Q  201 tagcctctttgcatctacaaaacaaa 226  Q
    ||||||||||||||||||||||||||    
T  11197301 tagcctctttgcatctacaaaacaaa 11197326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 11156648 - 11156895
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11156648 actgttgatccaaggtaaacttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtctttatagt 11156747  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaat 200  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||| |||||| |||||| |||||||||||| || |  |||||||| |||| ||||||    
T  11156748 taacaacaatcatgggtttgtcattgaggttgccaattactttgaagggccacgacttcatatcactttgtacgattgagtcgcaaaacttcctaccaat 11156847  T
Q  201 tagcctctttgcatctacaaaacaa--aagagagttgtgtacactatg 246  Q
    |||||||||||||||||||||||||  || ||||||| ||||||||||    
T  11156848 tagcctctttgcatctacaaaacaaacaaaagagttgagtacactatg 11156895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11241236 - 11241005
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11241236 actgttgatccaaggtaagcttcagctatcttggccatttttgccaataccatcgatgagatttcttcagcagcgaaatgcttttcctcgtcattatagt 11241137  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgca------aaatttccg 194  Q
    |||||| | ||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||  ||||| || ||      ||| ||||     
T  11241136 taacaatagtcatgtgtttgtcattcaggtcgccaattactttgaagggccacaacttcatatcactttgtatgatggggtcacaaaacttaaacttcct 11241037  T
Q  195 accaattagcctctttgcatctacaaaacaaa 226  Q
    ||||||||||||||||||||||||||||||||    
T  11241036 accaattagcctctttgcatctacaaaacaaa 11241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11161527 - 11161651
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  11161527 actgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagt 11161626  T
Q  101 taacaacaatcatgggtttgtcatt 125  Q
    |||||||||||||||||||||||||    
T  11161627 taacaacaatcatgggtttgtcatt 11161651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11200270 - 11200394
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  11200270 actgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagt 11200369  T
Q  101 taacaacaatcatgggtttgtcatt 125  Q
    |||||||||||||||||||||||||    
T  11200370 taacaacaatcatgggtttgtcatt 11200394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 11133372 - 11133593
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    |||||||||||||||||| |||| || |||||    ||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||||  |||| || |    
T  11133372 actgttgatccaaggtaaacttctgcaatctcacgaatttttgtcaataccattgatgatatttcctcagcagcaaaatgtttttcctctccattgtaat 11133471  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaat 200  Q
    | ||||||||  ||||||||||||| | | ||||||||||||| ||||||||||| |||| |||||| || ||||| || || | |||||  | ||||||    
T  11133472 tgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttcatatcactctgaactatagggtcactaaattctctaccaat 11133571  T
Q  201 tagcctctttgcatctacaaaa 222  Q
     |||||||| ||||||||||||    
T  11133572 gagcctcttcgcatctacaaaa 11133593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 363 - 433
Target Start/End: Original strand, 11171312 - 11171382
Alignment:
Q  363 ttaaccccgtaagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagctcctatg 433  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11171312 ttaaccccgtaagtaatacaatcttgggattttggtcccttataaaaaacaataacaaatcagctcctatg 11171382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Original strand, 8382104 - 8382149
Alignment:
Q  380 acaatcttgggattttggtcccttgtaaaaaacaataacaaatcag 425  Q
    |||||||||  |||||| |||||| |||||||||||||||||||||    
T  8382104 acaatcttgcaattttgatcccttataaaaaacaataacaaatcag 8382149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 1263 - 1538
Alignment:
Q  1 actgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 100  Q
    ||||||||||||||| | ||||| ||| |||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1263 actgttgatccaaggaaggcttctgctgtctcgcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtcattatagt 1362  T
Q  101 taacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaat 200  Q
    ||||||||||||||||||| |                   | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1363 taacaacaatcatgggtttatg------------------tatgaatggccacaacttcacatcactttctactatgggatcgcaaaatttccgaccaat 1444  T
Q  201 tagcctctttgcatctacaaaacaaaagagagttgtgtacactatg--nnnnnnnnttggatcgctttatgaattaatcattctatgtggattt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||| |||||||||| |||||||||||    
T  1445 tagcctctttgcatctacaaaacaaaagagagttgtgtacactatgaaaaaaacaattgtatcgctttatgtattaatcattttatgtggattt 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 1908 - 1962
Alignment:
Q  372 taagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc 426  Q
    ||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  1908 taagtaacacaatcttgagattttggtcccctataaaaaacaataacaaatcagc 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 6714 - 6770
Alignment:
Q  189 tttccgaccaattagcctctttgcatctacaaaacaaa-ag-agagttgtgtacact 243  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  6714 tttccaaccaattagcctctttgcatctacaaaacaaacagaagagttgtgtacact 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 2407345 - 2407404
Alignment:
Q  367 ccccgtaagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc 426  Q
    |||| ||||||  ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  2407345 ccccctaagtatcacaatcttgcgattttggtcccctataaaaaacaataacaaatcagc 2407404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 7875716 - 7875762
Alignment:
Q  380 acaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc 426  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  7875716 acaatcttgcgattttggtcccctataaaaaacaataacaaatcagc 7875762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 40352657 - 40352717
Alignment:
Q  366 accccgtaagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc 426  Q
    ||||| ||||||  ||||||||| |||||||||| | | ||||||||||||||||||||||    
T  40352657 accccctaagtatcacaatcttgcgattttggtcgcctataaaaaacaataacaaatcagc 40352717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 41415672 - 41415714
Alignment:
Q  380 acaatcttgggattttggtcccttgtaaaaaacaataacaaat 422  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||    
T  41415672 acaatcttgcgattttggccccttataaaaaacaataacaaat 41415714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 3147757 - 3147866
Alignment:
Q  108 aatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctc 207  Q
    ||||||||||||||||||||   | | ||| || ||||||||||||||| ||| |||| |||| || |  | ||| | ||| |||| |||||||| ||||    
T  3147757 aatcatgggtttgtcattcactccgcaaatgaccttgaatggccacaacatcatatcattttgaacaacagaatcaccaaacttcctaccaattaacctc 3147856  T
Q  208 tttgcatcta 217  Q
    ||||||||||    
T  3147857 tttgcatcta 3147866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 8647354 - 8647410
Alignment:
Q  100 ttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttc 159  Q
    ||||||| ||||||||||||||||||||   | ||||| || ||||||||||||||||||    
T  8647354 ttaacaataatcatgggtttgtcattca---ccccaatgaccttgaatggccacaacttc 8647410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 8640237 - 8640170
Alignment:
Q  100 ttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttg 170  Q
    ||||||| |||| |||||||||||||||   | ||||| || ||||||||||||||||||| |||| ||||    
T  8640237 ttaacaataatcgtgggtttgtcattca---ccccaatgaccttgaatggccacaacttcatatcattttg 8640170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 5003527 - 5003571
Alignment:
Q  380 acaatcttgggattttggtcccttgtaaaaaacaataacaaatca 424  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  5003527 acaatcttgcgattttgatcccttataaaaaacaataacaaatca 5003571  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 15595516 - 15595571
Alignment:
Q  100 ttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaactt 158  Q
    ||||||| ||||||||||||||||||||   ||||||| || |||||||||||||||||    
T  15595516 ttaacaataatcatgggtttgtcattca---caccaatgaccttgaatggccacaactt 15595571  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 33096059 - 33096104
Alignment:
Q  381 caatcttgggattttggtcccttgtaaaaaacaataacaaatcagc 426  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  33096059 caatcttgcaattttggtcccttataaaaaataataacaaatcagc 33096104  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 18896459 - 18896505
Alignment:
Q  380 acaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc 426  Q
    ||||||||| |||||||||||| | ||||||||||||| ||||||||    
T  18896459 acaatcttgcgattttggtcccctataaaaaacaataataaatcagc 18896505  T

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