View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1272_high_42 (Length: 333)
Name: NF1272_high_42
Description: NF1272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1272_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 28 - 311
Target Start/End: Complemental strand, 34655153 - 34654870
Alignment:
| Q |
28 |
caatcatttcatgttgaaattagctaatggaaaatcgactgtcaactgaatcacttgtcaactgaaggttaaacatgattgccaaatctaaatggacttg |
127 |
Q |
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| T |
34655153 |
caatcatctcatgttgaaatcagctaatggagaatggactgacaacttaatcacttgtcaactgaaggttaaacatgattaccaaatctaaatggacttg |
34655054 |
T |
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| Q |
128 |
taggtggttacaagcctcattagaagtgattgcatctgatcaattgtaacaaaatcaattgagattggaatcaacttatcatttaaaattggatggaagc |
227 |
Q |
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| T |
34655053 |
taggtggttacaagcctcattagaagtgattgcatctgatcaattgtaacaaaatcaattgagattggaatcaacttatcatttaaaattggatggaagc |
34654954 |
T |
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| Q |
228 |
taaagcaggccaaacatagtcaccaagtctaaatatggttaatcagcttggatgttgtttgttattggtcttattagggtcatg |
311 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34654953 |
taaagcaggccaaacatagtcacgaagtctaaatatggttaatcagcttggatgttgtttgttattggtcttattagggtcatg |
34654870 |
T |
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