View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1272_low_37 (Length: 395)
Name: NF1272_low_37
Description: NF1272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1272_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 81 - 297
Target Start/End: Original strand, 25795399 - 25795615
Alignment:
| Q |
81 |
atcataggtgttgtgattgtgagatgttattaaatattataggtcatgtttttgtgttaccaaaagaagcttcagctgaaagaaataagcttgtatggtt |
180 |
Q |
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| T |
25795399 |
atcataggtgttgtgattgtgagatgttattaaatattataggtcatgtttttgtgttaccaaaagaagcttcagctgaaagaaataagcttgtatggtt |
25795498 |
T |
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| Q |
181 |
aagttatatagttcagaaccttatagaataagttacatgaatgaaatacctggctctgtgggcacaagtgccagcttcattctcagattaggccaaacct |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
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| T |
25795499 |
aagttatatagttcagaaccttatagaataagttacatgaatgaaatacctggctctgtgggcacaagtgccagcttcattctcagattaggccagactt |
25795598 |
T |
|
| Q |
281 |
tgttttcatctgcttcc |
297 |
Q |
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||||||||||||||||| |
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| T |
25795599 |
tgttttcatctgcttcc |
25795615 |
T |
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