View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1272_low_97 (Length: 229)
Name: NF1272_low_97
Description: NF1272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1272_low_97 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 10928768 - 10928992
Alignment:
| Q |
7 |
acctcaacttattaaagctggagatttt-gttatcagtctgccaag-cagccacctcttttaatgatgttaggccgatttctacttcattgttagtgttg |
104 |
Q |
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| T |
10928768 |
acctcaacttattaaatctggagatttttgttatcagcctgccaaggcagccacctcttttaatgatgttaggccgatttctacttcattgttagtgttt |
10928867 |
T |
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| Q |
105 |
aacatttgattagttagctctgttgatggtctcgtaattggatctatcctctcactatcatttttagttgttaattttaactgatcctcactaggnnnnn |
204 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10928868 |
aacatttgattagttagctctgttgatggtctcataattggatctatcctctcactatcatttttagttgttaattttaactgatcctcactaggttttt |
10928967 |
T |
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| Q |
205 |
nnncttttacaaatgaactacagaa |
229 |
Q |
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|||||||||||||||||||||| |
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| T |
10928968 |
tttcttttacaaatgaactacagaa |
10928992 |
T |
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