View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1273-Insertion-7 (Length: 61)
Name: NF1273-Insertion-7
Description: NF1273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1273-Insertion-7 |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 51; Significance: 5e-21; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-21
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 4390383 - 4390329
Alignment:
| Q |
7 |
acaatgcaataccgatgaaggctgtgaagagtaaggagtttgttagaatgtgtga |
61 |
Q |
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| T |
4390383 |
acaatgcaataccgatgaaggcggtgaagagtaaggagtttgttagaatgtgtga |
4390329 |
T |
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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 4385270 - 4385217
Alignment:
| Q |
7 |
acaatgcaataccgatgaaggctgtgaagagtaaggagtttgttagaatgtgtg |
60 |
Q |
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| T |
4385270 |
acaatgcaataccgatgaaggcggtgaagagtatggagtttgttcaaatgtgtg |
4385217 |
T |
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