View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12731_low_8 (Length: 278)

Name: NF12731_low_8
Description: NF12731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12731_low_8
NF12731_low_8
[»] chr2 (18 HSPs)
chr2 (10-264)||(25137420-25137674)
chr2 (10-264)||(18992618-18992869)
chr2 (19-229)||(24173789-24174001)
chr2 (68-256)||(23013575-23013763)
chr2 (10-253)||(27619235-27619475)
chr2 (19-253)||(113176-113407)
chr2 (55-242)||(22289896-22290083)
chr2 (19-253)||(22048986-22049217)
chr2 (19-253)||(24799655-24799886)
chr2 (19-253)||(27623262-27623493)
chr2 (19-253)||(16771316-16771547)
chr2 (10-75)||(23015014-23015079)
chr2 (111-264)||(23249492-23249645)
chr2 (223-264)||(25353651-25353692)
chr2 (223-264)||(25359929-25359970)
chr2 (19-151)||(24369637-24369769)
chr2 (223-264)||(15605-15646)
chr2 (224-264)||(24176078-24176118)
[»] chr3 (16 HSPs)
chr3 (21-264)||(14069875-14070118)
chr3 (10-254)||(13200986-13201230)
chr3 (19-254)||(14455320-14455553)
chr3 (10-253)||(13510670-13510910)
chr3 (19-253)||(15633229-15633460)
chr3 (19-253)||(15640743-15640974)
chr3 (19-253)||(12191144-12191375)
chr3 (10-253)||(13140486-13140726)
chr3 (19-253)||(10142727-10142958)
chr3 (19-253)||(12197788-12198019)
chr3 (53-253)||(13191742-13191942)
chr3 (19-253)||(11878659-11878890)
chr3 (19-253)||(10164497-10164728)
chr3 (19-117)||(11867280-11867375)
chr3 (223-264)||(10606530-10606571)
chr3 (223-264)||(22168307-22168348)
[»] chr6 (16 HSPs)
chr6 (10-256)||(2652548-2652794)
chr6 (19-264)||(25776484-25776729)
chr6 (19-250)||(22597430-22597661)
chr6 (10-264)||(11206817-11207071)
chr6 (19-249)||(19562075-19562306)
chr6 (10-217)||(11215670-11215877)
chr6 (86-254)||(23613177-23613345)
chr6 (19-264)||(18007505-18007750)
chr6 (19-253)||(20165867-20166098)
chr6 (19-253)||(24859561-24859792)
chr6 (63-264)||(23522134-23522335)
chr6 (19-253)||(22771454-22771685)
chr6 (10-262)||(8728307-8728556)
chr6 (19-260)||(23345404-23345645)
chr6 (20-264)||(25950943-25951187)
chr6 (86-264)||(18846150-18846328)
[»] chr8 (14 HSPs)
chr8 (19-264)||(22827570-22827815)
chr8 (10-264)||(22286662-22286917)
chr8 (10-264)||(18400948-18401202)
chr8 (23-264)||(25468959-25469200)
chr8 (19-262)||(21823033-21823273)
chr8 (26-262)||(22037842-22038075)
chr8 (19-231)||(22359097-22359309)
chr8 (19-253)||(22094910-22095141)
chr8 (19-262)||(21951728-21951968)
chr8 (19-253)||(8310137-8310368)
chr8 (19-253)||(8327167-8327398)
chr8 (86-264)||(19291722-19291900)
chr8 (226-264)||(21234493-21234531)
chr8 (223-264)||(23219020-23219061)
[»] scaffold0042 (1 HSPs)
scaffold0042 (10-264)||(54882-55136)
[»] chr7 (19 HSPs)
chr7 (19-256)||(12737321-12737558)
chr7 (10-254)||(11966390-11966635)
chr7 (10-260)||(16527669-16527919)
chr7 (10-264)||(13653662-13653913)
chr7 (19-262)||(16469824-16470064)
chr7 (19-254)||(13373089-13373324)
chr7 (10-142)||(16765325-16765457)
chr7 (19-196)||(12387606-12387782)
chr7 (19-253)||(18275693-18275924)
chr7 (19-253)||(13669505-13669736)
chr7 (19-253)||(18597639-18597870)
chr7 (76-264)||(543330-543518)
chr7 (86-264)||(16329089-16329267)
chr7 (223-264)||(13632304-13632345)
chr7 (223-264)||(13738984-13739025)
chr7 (223-264)||(14547259-14547300)
chr7 (223-264)||(23511872-23511913)
chr7 (223-264)||(8785661-8785702)
chr7 (86-195)||(14228158-14228267)
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-256)||(25506-25752)
[»] chr5 (17 HSPs)
chr5 (10-264)||(22321763-22322017)
chr5 (21-264)||(21383931-21384174)
chr5 (10-264)||(25120502-25120756)
chr5 (10-264)||(25179593-25179847)
chr5 (10-262)||(30767437-30767686)
chr5 (19-264)||(21274922-21275167)
chr5 (19-264)||(21276469-21276714)
chr5 (10-262)||(20442510-20442759)
chr5 (19-253)||(20617830-20618061)
chr5 (19-253)||(24967516-24967747)
chr5 (223-264)||(18069070-18069111)
chr5 (223-264)||(20599834-20599875)
chr5 (223-264)||(20606131-20606172)
chr5 (223-264)||(20612450-20612491)
chr5 (223-264)||(21284233-21284274)
chr5 (223-264)||(20794739-20794780)
chr5 (223-260)||(24216621-24216658)
[»] scaffold1058 (1 HSPs)
scaffold1058 (21-264)||(1261-1503)
[»] scaffold0634 (1 HSPs)
scaffold0634 (22-264)||(963-1205)
[»] chr1 (10 HSPs)
chr1 (19-233)||(8647397-8647611)
chr1 (19-264)||(8951749-8951994)
chr1 (19-254)||(22467298-22467533)
chr1 (10-264)||(52952115-52952369)
chr1 (10-264)||(20233177-20233428)
chr1 (10-142)||(19786464-19786596)
chr1 (19-253)||(21803019-21803250)
chr1 (19-253)||(22843391-22843622)
chr1 (182-256)||(19786597-19786671)
chr1 (213-250)||(16399395-16399432)
[»] scaffold0117 (1 HSPs)
scaffold0117 (48-249)||(44338-44539)
[»] scaffold0750 (1 HSPs)
scaffold0750 (10-251)||(1919-2159)
[»] scaffold0346 (2 HSPs)
scaffold0346 (10-264)||(633-887)
scaffold0346 (144-254)||(18070-18180)
[»] scaffold0075 (1 HSPs)
scaffold0075 (10-264)||(45413-45667)
[»] chr4 (8 HSPs)
chr4 (10-264)||(5832-6086)
chr4 (19-262)||(15264409-15264649)
chr4 (19-262)||(15249992-15250232)
chr4 (19-253)||(22106629-22106861)
chr4 (19-253)||(1461-1692)
chr4 (19-127)||(15857903-15858011)
chr4 (19-261)||(11920629-11920871)
chr4 (19-155)||(15303758-15303891)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-254)||(116620-116855)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-254)||(187882-188126)
[»] scaffold0396 (1 HSPs)
scaffold0396 (22-264)||(5752-5994)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-264)||(367677-367922)
[»] scaffold1589 (1 HSPs)
scaffold1589 (21-264)||(887-1131)
[»] scaffold0759 (1 HSPs)
scaffold0759 (10-242)||(538-770)
[»] scaffold0326 (1 HSPs)
scaffold0326 (10-211)||(17032-17233)
[»] scaffold0078 (1 HSPs)
scaffold0078 (10-262)||(26160-26409)
[»] scaffold0213 (1 HSPs)
scaffold0213 (19-264)||(23243-23488)
[»] scaffold0164 (1 HSPs)
scaffold0164 (19-262)||(35133-35373)
[»] scaffold0112 (1 HSPs)
scaffold0112 (19-253)||(6967-7198)
[»] scaffold1092 (1 HSPs)
scaffold1092 (146-264)||(9-126)
[»] scaffold0506 (1 HSPs)
scaffold0506 (10-117)||(6384-6491)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-264)||(523766-524011)
[»] scaffold0556 (2 HSPs)
scaffold0556 (144-262)||(59-177)
scaffold0556 (10-108)||(176-271)
[»] scaffold0175 (1 HSPs)
scaffold0175 (223-264)||(10974-11015)
[»] scaffold0029 (1 HSPs)
scaffold0029 (223-264)||(119551-119592)
[»] scaffold0023 (1 HSPs)
scaffold0023 (10-84)||(119215-119286)
[»] scaffold0035 (1 HSPs)
scaffold0035 (86-264)||(53962-54140)


Alignment Details
Target: chr2 (Bit Score: 183; Significance: 5e-99; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 25137420 - 25137674
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  25137420 ctcgttccttggttgtattgagcgtagttcattttctcaatactattagcagcactacctaactgacaatcaacaccaatatgaccaaatataccacaaa 25137519  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| || |||||||||||||    
T  25137520 tgtcacaaggaggagatgcaggagtaggtgtgatagcactaacatttagtttttcaaatttttgggttagtgcatcaaccttaccagcaaggtgatcata 25137619  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     | ||||||||  ||||||||||||||||| |||||||||||||| |||||||||    
T  25137620 gtcagagacttcatacatacctgcctctttcttagagggtgtagaggcagtgatg 25137674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 18992618 - 18992869
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |    
T  18992618 ctcgttccttggttgtattgagcatagttcattagctcaatactattagtagcactacctaactaacaatcaacaccaatatgaccaaatataccacaaa 18992717  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||   |||||||| ||||||||  |||| | || ||||||| ||||||||||| ||| || ||| |||||| ||||||||| |||||||||||||    
T  18992718 tttcaca---aggagatgtaggagtaggggtgacaacattaacattaagtttttcaaattttcggtttagtgcatccaccttagcagcaaggtgatcata 18992814  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || | ||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  18992815 atcaaagacttcgtacatacctgcctcttttttagagggtgtagaagtagtgatg 18992869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 24173789 - 24174001
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||| ||||||||||||| || || ||||| |||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  24173789 tggttgtattgagcatagttcatttgctcaacaccattagtagcactacctaactggaaatcaacaccaatatgaccaaatataccacaaatttcacaag 24173888  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttatt--gcatcaaccttagcaacaaggtgatcataattagag 216  Q
    || |||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||| |  ||||||||||||||| |||| |||||||| ||||||    
T  24173889 gaagagatgcaagagtaggtgtgacagcactaacatttagtttttcaaatttttgggttagtgcgcatcaaccttagcagcaagatgatcatagttagag 24173988  T
Q  217 acttattacatac 229  Q
    ||||  |||||||    
T  24173989 acttcgtacatac 24174001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 68 - 256
Target Start/End: Complemental strand, 23013763 - 23013575
Alignment:
Q  68 ctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaa 167  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  23013763 ctaactgacaatcaacaccaatatgaccaaatatactacagatttcacaaggaggagatataggagtaggtgtgacagcactaacattaagtttttcaaa 23013664  T
Q  168 attttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaag 256  Q
     |||||||||| |||||| ||||||||| ||||||||||||| | ||||||||  |||||||||| ||||||| |||||||||||||||    
T  23013663 tttttgggttagtgcatccaccttagcagcaaggtgatcatagtcagagacttcgtacatacctgactcttttctagagggtgtagaag 23013575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 27619475 - 27619235
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  27619475 ctcgttccttggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctatatgaccggatataccacaga 27619379  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||| ||||||| || || || || |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | |||    
T  27619378 tttcacaaggaggggatgcagaagaaggtgcgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttata 27619279  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtag 253  Q
     | ||||||||  || |||||||||||||| |||||||| ||||    
T  27619278 ttcagagacttcgtatatacctgcctctttcttagagggagtag 27619235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 113407 - 113176
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||| ||||||||||||||||||||||| | ||||||||  |||||||||||| ||||||||    
T  113407 tggttgtattgagcgtaattcagttgctcaata---ttggcaacactacctaactgacaatcaacacctatatgaccggatataccacagacttcacaag 113311  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| | ||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  113310 gagggggtgcagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttatattcagagac 113211  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  113210 ttcgtatatacctgcctctttcttagagggagtag 113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 22290083 - 22289896
Alignment:
Q  55 ttagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacat 154  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| || || || |||| ||||||    
T  22290083 ttagcagcattacctaactgacaatcaacaccaatatgaccaattataccacagatttcacaaggaggagatgtaggagaaggtgcgacagcattaacat 22289984  T
Q  155 ttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctctttttt 242  Q
    | |  || ||||| ||||| ||||  ||||||||||||||| | ||||||||||| ||||||||||  |||||||||||||| |||||    
T  22289983 taaacttatcaaatttttgagttaaagcatcaaccttagcagctaggtgatcatagttagagacttcgtacatacctgcctccttttt 22289896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 22048986 - 22049217
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  22048986 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 22049082  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  22049083 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 22049182  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  22049183 ttcgtgtatacctgcctctttcttagagggagtag 22049217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 24799655 - 24799886
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  24799655 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 24799751  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  24799752 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 24799851  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  24799852 ttcgtgtatacctgcctctttcttagagggagtag 24799886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 27623493 - 27623262
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  27623493 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 27623397  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  27623396 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 27623297  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  27623296 ttcgtgtatacctgcctctttcttagagggagtag 27623262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 16771547 - 16771316
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  16771547 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 16771451  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | | ||||    
T  16771450 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcatagac 16771351  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  16771350 ttcgtgtatacctgcctctttcttagagggagtag 16771316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 23015079 - 23015014
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactga 75  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  23015079 ctcgttcattggttgtattgagcatagttcatttgctcaatactattagtagcactacctaactga 23015014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 23249492 - 23249645
Alignment:
Q  111 ttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataa 210  Q
    |||||||||||| ||  || ||| || |||||||||||||  ||| | ||| ||||| ||||| || | ||||||||||||| || | || ||||||       
T  23249492 ttcacaaggaggtgaaacaagagcaggtgtgatagcactagtattcattttgtcaaatttttgtgtgagtgcatcaaccttaacagctagatgatcaagg 23249591  T
Q  211 ttagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     |||| | ||  |||||||||||||||||||||||||||| ||||||| |||||    
T  23249592 gtagaaatttcatacatacctgcctcttttttagagggtgaagaagcaatgatg 23249645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 25353692 - 25353651
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  25353692 tacatacctgcctcttttttagagggtgaagaagcagtgatg 25353651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 25359970 - 25359929
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  25359970 tacatacctgcctcttttttagagggtgaagaagcagtgatg 25359929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 24369637 - 24369769
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||| ||| || |||||||||| || ||| | | ||||||||||||  || || |||||  |||||||| ||||||||||| ||| ||||||||    
T  24369637 tggttgtattaagcataattcatttgctcaacactttcaacagcactacctagttggcattcaacgccaatatgatcaaatataccatagacttcacaag 24369736  T
Q  119 gaggagatgcaggagtagatgtgatagcactaa 151  Q
    |||| ||  |||||| || ||||| | ||||||    
T  24369737 gaggtgaaacaggagcaggtgtgacaacactaa 24369769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 15605 - 15646
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  15605 tacatacctgcctcctttttagagggtgaagaagcagtgatg 15646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 24176078 - 24176118
Alignment:
Q  224 acatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  24176078 acatacctgcctcttttttagagggtgaagaagctgtgatg 24176118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 7e-95; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 21 - 264
Target Start/End: Original strand, 14069875 - 14070118
Alignment:
Q  21 gttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaagga 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14069875 gttgtattgagcgtagttcatttgctcaatactattagcagcactacctaactgacaatcaacaccaatatgaccaaatataccacagatttcacaagga 14069974  T
Q  121 ggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagactt 220  Q
    ||||||| |||||||| ||||| |||||||||||| |||||||||||  ||||||||| ||| |||||||||||| ||||||||||||| | ||||||||    
T  14069975 ggagatgtaggagtaggtgtgacagcactaacattaagtttttcaaatctttgggttaatgcgtcaaccttagcagcaaggtgatcatagtcagagactt 14070074  T
Q  221 attacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
      ||||||||| ||||||||||||||||||||||||| ||||||    
T  14070075 cgtacataccttcctcttttttagagggtgtagaagcggtgatg 14070118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 13200986 - 13201230
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||||||||| || || |||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  13200986 ctcgttccttggttgtattgtgcataattcatttgctcaatactattagtagcactatctaactgtcaatcaacaccaatatgaccaaatataccacaga 13201085  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||| | || ||||| |||| ||||||| ||||||||||| ||||| ||||  ||||||||||||||| | |||||||||||    
T  13201086 tttcacaaggaggagatgtaggtgaaggtgtgacagcattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagcgaggtgatcata 13201185  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtaga 254  Q
    ||  |||| ||  |||||||||||||| ||||| ||| |||||||    
T  13201186 atcggagaattcgtacatacctgcctcctttttggagagtgtaga 13201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 14455320 - 14455553
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||    
T  14455320 tggttgtattgagcgtagttcatttgttcaataccattggcagcactacctaactgacaatcaacacctatatgaccaaatacaccacaaatttcacaag 14455419  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| || || || | ||| |||  ||||||| |||||||  ||| |||| ||||  ||||||||||||||| ||||||||||||||| ||||||    
T  14455420 gaggagatgtagtagaaggtatgacagctttaacattaagttttt--aaaatttgagttaaggcatcaaccttagcagcaaggtgatcataatcagagac 14455517  T
Q  219 ttattacatacctgcctcttttttagagggtgtaga 254  Q
     |  |||||| ||||||| ||||| |||||||||||    
T  14455518 ctcgtacatatctgcctcctttttggagggtgtaga 14455553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 13510670 - 13510910
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  13510670 ctcgttccttggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctatatgaccggatataccacaga 13510766  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||| | ||||| || || |||||||||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | |||    
T  13510767 tttcacaaggagggggtgcagaagaaggtgtgatagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttata 13510866  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtag 253  Q
     | ||||||||  || |||||||||||||| |||||||| ||||    
T  13510867 ttcagagacttcgtatatacctgcctctttcttagagggagtag 13510910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 15633229 - 15633460
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||    
T  15633229 tggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctatatgaccggatataccacagatttcacaag 15633325  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || ||| | |||| ||||||| ||||||||||  |||||||||| ||| ||| |||||||| ||||||| | ||| | ||||||    
T  15633326 gaggggatgcagaagaaggtgtaacagcattaacattaagtttttcaatcttttgggttaatgcctcatccttagcagcaaggtggttatattcagagac 15633425  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  15633426 ttcatatatacctgcctctttcttagagggagtag 15633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 15640974 - 15640743
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  15640974 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 15640878  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  15640877 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 15640778  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  15640777 ttcgtgtatacctgcctctttcttagagggagtag 15640743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 12191144 - 12191375
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| || ||||||||  ||||||||||| ||||||||    
T  12191144 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacaccagtatgaccagttataccacagacttcacaag 12191240  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| || || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  12191241 taggggatgcaggagaaggtggggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 12191340  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  12191341 ttcgtatatacctgcctctttcttagagggagtag 12191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 13140486 - 13140726
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | || ||||   ||||||||||||    
T  13140486 ctcgttccttggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctatgtgactggatataccacaga 13140582  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||| |||||||  | || ||| | | || ||||||| ||||||||||  |||||||||| ||| |||||||||||| ||||||| | |||    
T  13140583 tttcacaaggaggggatgcagaggaaggtgtaacatcattaacattaagtttttcaatcttttgggttaatgcctcaaccttagcagcaaggtggttata 13140682  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtag 253  Q
     | ||||||||  || |||||||||||||| |||||||| ||||    
T  13140683 ttcagagacttcatatatacctgcctctttcttagagggagtag 13140726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 10142958 - 10142727
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||| ||| |  ||||||||  ||||||||||| ||||||||    
T  10142958 tggttgtattgagcgtaatttaattgctcaata---ttggcagcactacctaactgacaatcgacacctgtatgaccagttataccacagacttcacaag 10142862  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| || || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  10142861 taggggatgcaggaggaggtggggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 10142762  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  10142761 ttcgtatatacctgcctctttcttagagggagtag 10142727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 12197788 - 12198019
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  12197788 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 12197884  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| |  || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  12197885 taggggatgcaggagaatgtggggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 12197984  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  12197985 ttcgtatatacctgcctctttcttagagggagtag 12198019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 53 - 253
Target Start/End: Original strand, 13191742 - 13191942
Alignment:
Q  53 tattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaac 152  Q
    |||| |||||||||| |||||||||||||||| |  ||||||||  ||||||||||| |||||||| ||| |||||||||| || || || |||| ||||    
T  13191742 tattggcagcactacttaactgacaatcaacacctgtatgaccagttataccacagacttcacaagtaggggatgcaggagaaggtgggacagcattaac 13191841  T
Q  153 atttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgta 252  Q
    ||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||||  || |||||||||||||| |||||||| |||    
T  13191842 attaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagacttcgtatatacctgcctctttcttagagggagta 13191941  T
Q  253 g 253  Q
    |    
T  13191942 g 13191942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 11878659 - 11878890
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  11878659 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 11878755  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  11878756 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 11878855  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  11878856 ttcgtgtatacctgcctctttcttagagggagtag 11878890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 10164497 - 10164728
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  10164497 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 10164593  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| || || |  || | ||||||| |||||||| |  ||||| |||| ||| ||||| |||||| ||||||| | ||| | ||||||    
T  10164594 taggggatgcaggagaaggtgaggcagtattaacattaagtttttctattttttgtgttaatgcctcaactttagcagcaaggtggttatattcagagac 10164693  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || ||| |||||||||| |||||||| ||||    
T  10164694 ttcgtatatatctgcctctttcttagagggagtag 10164728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 11867280 - 11867375
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaa 117  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| |||||||    
T  11867280 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaa 11867375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 10606530 - 10606571
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  10606530 tacatacctgcctcttttttagagggtgaagaagcagtgatg 10606571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 22168307 - 22168348
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  22168307 tacatacctacctcttttttagagggtgaagaagcagtgatg 22168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 2652794 - 2652548
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |    
T  2652794 ctcgttccttggttgtattgagcatagttcatttgctcaatactattagtagcactacctaacttacaatcaacaccaatatgaccaaatataccacata 2652695  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| |||||||| ||||| | |||||||||| ||||||||||| |||||||||| |||||| ||||||| | |||||||||||||    
T  2652694 tttcacaaggaggagatgtaggagtaggtgtgacaacactaacattaagtttttcaaatttttgggttagtgcatccaccttagtagcaaggtgatcata 2652595  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaag 256  Q
    || ||||||||  ||||||||||||||||||||||||||||||||||    
T  2652594 atcagagacttcatacatacctgcctcttttttagagggtgtagaag 2652548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 25776729 - 25776484
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||    
T  25776729 tggttgtattgagcgtagttcatttgctcaataccattagcagcactacctaacttaaaatcaacatcaatataaccaaatataccacaaatttcacaag 25776630  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||||| |||  ||||||||| | ||||||||||||||  | ||||||||||   ||||||    
T  25776629 gaggagatgtaggagtaggtgtgacagcactaacattaagttttttaaatctttgggttaatacatcaaccttagcagaatggtgatcataggcagagac 25776530  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  ||||||||||||||||||| |||| ||||||| || ||||||    
T  25776529 ttcgtacatacctgcctctttttaagagagtgtagaggcggtgatg 25776484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 22597430 - 22597661
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||| |||||||||| || || || ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  22597430 tggttgtattgagcatagttcattttctcaacaccattagtagcactacctaactggcaatcaacaccaatatgaccaaatataccacaaatttcacaag 22597529  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||| |||||||||||||| ||||| | |||||||||||||||||||||| ||||  |||| |||| ||||||||||| |||| |||||||| ||||||||    
T  22597530 gagaagatgcaggagtaggtgtgacaacactaacatttagtttttcaaatttttaagttagtgcagcaaccttagcagcaagatgatcatagttagagac 22597629  T
Q  219 ttattacatacctgcctcttttttagagggtg 250  Q
    ||  |||||| |||||||||||||||||||||    
T  22597630 ttcgtacatatctgcctcttttttagagggtg 22597661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 11207071 - 11206817
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| |||||||||||| || |||||||| ||||||||||||    
T  11207071 ctcgttccttggttgtattgagcatagttcaattgctcaatactattagtagcactacctaattgacaatcaacaccagtatgaccatatataccacaga 11206972  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||||||||  |||| || ||||| |||| ||||||| ||||||||||| ||||| |||| |||| | |||||||||||||||||||||||    
T  11206971 tttcacaaggaggagatgtcggagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaatgcaacgaccttagcaacaaggtgatcata 11206872  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  || ||||||||||| ||||| ||||||||||| || ||||||    
T  11206871 atcagagacctcgtaaatacctgcctcctttttggagggtgtagaggcggtgatg 11206817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 19562075 - 19562306
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||| ||||| ||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||     
T  19562075 tggttgtattgagcatagttgatttgctcaatactattagtaacactacctaactgacaatcaacaccaatatgaccgaatataccacagatttcacaat 19562174  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaa-attttgggttattgcatcaaccttagcaacaaggtgatcataattagaga 217  Q
    ||||||||| |||||||| |||||   |||||||||| | |||||||||  |||| ||||| |||||| ||||||||| ||||||||||||||| |||||    
T  19562175 gaggagatgtaggagtaggtgtgactacactaacattaaatttttcaaatttttttggttagtgcatccaccttagcagcaaggtgatcataatcagaga 19562274  T
Q  218 cttattacatacctgcctcttttttagagggt 249  Q
    |||  |||||| ||| ||||||||||||||||    
T  19562275 cttcgtacataactggctcttttttagagggt 19562306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 11215877 - 11215670
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| |||||||||||| || |||||||| ||||||||||||    
T  11215877 ctcgttccttggttgtattgagcatagttcaattgctcaatactattagtagcactacctaattgacaatcaacaccagtatgaccatatataccacaga 11215778  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||||||||  |||| || ||||| |||| ||||||| ||||||||||| ||||| |||| |||||| ||||||||| |||||||||||||    
T  11215777 tttcacaaggaggagatgtcggagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaatgcatcgaccttagcagcaaggtgatcata 11215678  T
Q  210 attagaga 217  Q
    || |||||    
T  11215677 atcagaga 11215670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 86 - 254
Target Start/End: Original strand, 23613177 - 23613345
Alignment:
Q  86 caatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatc 185  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||| ||||||||||| ||||| |||| ||||||    
T  23613177 caatatgaccaaatataccacagatttcacaaggaggagatgtaggagaaggtgtgatagcattaacattaagtttttcaaatttttgagttaatgcatc 23613276  T
Q  186 aaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtaga 254  Q
     ||||||||| |||||||||| |||| |||||| |  || ||||||||||| |||||||||||||||||    
T  23613277 gaccttagcagcaaggtgatcttaatcagagacctcgtaaatacctgcctcctttttagagggtgtaga 23613345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 18007750 - 18007505
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | | ||| ||| ||||||||||||| ||||||||||||| | ||||||||||| | |||||||||||||||||    
T  18007750 tggttgtattgagcgtagttcatttgttcattaccattggcagcactacctagctgacaatcaacacctatatgaccaaaaacaccacagatttcacaag 18007651  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| |||| || || || ||||| |||| ||| ||| ||||||| ||| ||||| ||||  |||||||  |||||| ||||||||||||||| |||||     
T  18007650 gaggggatgtagtagaaggtgtgacagcattaagattaagttttttaaatttttgagttaaggcatcaaaattagcagcaaggtgatcataatcagagat 18007551  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     |  || ||||||||||| ||||| ||||||||||| || ||||||    
T  18007550 ctcgtaaatacctgcctcctttttggagggtgtagaggcggtgatg 18007505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 20166098 - 20165867
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  20166098 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 20166002  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| || || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  20166001 taggggatgcaggagaaggtggggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 20165902  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  20165901 ttcgtatatacctgcctctttcttagagggagtag 20165867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 24859561 - 24859792
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || |||||||| |||||||| ||||||||| | |||||||||  ||||||||||||||||||||    
T  24859561 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactgcctaactggcaatcaacacctatatgaccagttataccacagatttcacaag 24859657  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  24859658 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 24859757  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  24859758 ttcgtgtatacctgcctctttcttagagggagtag 24859792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 264
Target Start/End: Original strand, 23522134 - 23522335
Alignment:
Q  63 actacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttt 162  Q
    |||||||| |||  |||||||| ||||||| ||||| | |||||| |||||||||||||||||| ||||||||| ||||| || ||||||||| | ||||    
T  23522134 actacctagctggaaatcaacaccaatatggccaaacacaccacaaatttcacaaggaggagatacaggagtaggtgtgacagaactaacattcattttt 23522233  T
Q  163 tcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||||| |||||||| | |   |||||||||||| |||| ||||||    |||||||||  ||||||||||||||||||| ||| |||| |||||||||||    
T  23522234 tcaaacttttgggtgagtaagtcaaccttagcagcaagatgatcaagggtagagacttcgtacatacctgcctctttttaagaaggtgaagaagcagtga 23522333  T
Q  263 tg 264  Q
    ||    
T  23522334 tg 23522335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 22771454 - 22771685
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  22771454 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 22771550  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| ||||| |||| || || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  22771551 taggggatgcgggagaaggtgaggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 22771650  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  22771651 ttcgtatatacctgcctctttcttagagggagtag 22771685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 262
Target Start/End: Original strand, 8728307 - 8728556
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| || | ||||| ||||   || |||||||||||||  || ||||||||| | ||||||||  |||||||||| |    
T  8728307 ctcgttccttggttatattgagcgtaattgagttgctcaata---ttggcagcactacctagttggcaatcaacaccgatatgaccggatataccacata 8728403  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||| |  |||| |||| || ||  | ||||| |||| ||||||| |||||||| || ||||||||||  || |||||||||||| ||||||| | |||    
T  8728404 tttcaaaccgaggggatgtagaagatggtgtgacagcattaacattaagtttttcgaatttttgggttaacgcctcaaccttagcagcaaggtggttata 8728503  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
     | ||||||||  || |||||||||||||| |||||||| |||||||| ||||    
T  8728504 ttcagagacttcgtatatacctgcctctttcttagagggagtagaagcggtga 8728556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 23345404 - 23345645
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||| || |||||| ||| || ||  | |  |||||||||||  || ||||||||  || ||||| |||||| |||||||| ||||||||    
T  23345404 tggttgtattgagcataattcattagctcaacaccttcaatagcactacctagttgtcaatcaacgccagtatgagcaaatacaccacagacttcacaag 23345503  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||  |||||| || ||||| |||||||||||| | ||| ||||| ||  | || | ||| |||||||||||| | || ||||||     ||| |     
T  23345504 gaggtgagacaggagcaggtgtgacagcactaacattcattttgtcaaatttaagtgtgagtgcgtcaaccttagcatctagatgatcaagggaagaaat 23345603  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagt 260  Q
    ||  |||||||||||||||||||||||||||| |||||||||    
T  23345604 ttcgtacatacctgcctcttttttagagggtgaagaagcagt 23345645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 264
Target Start/End: Complemental strand, 25951187 - 25950943
Alignment:
Q  20 ggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaagg 119  Q
    |||| |||||||  || |||| ||||| |||||| | |||| |||||||||  || |||||||   ||||||| ||||||| |||||| |||||||||||    
T  25951187 ggttatattgagaataattcaattgctcaatactttcagcaacactacctagttggcaatcaatgccaatatggccaaatacaccacaaatttcacaagg 25951088  T
Q  120 aggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagact 219  Q
    ||| ||| |||| | || ||||| | |||||  ||| | ||| ||||| ||||| |||| ||| |||||||||||| | || | ||||     ||| | |    
T  25951087 aggtgatacaggggcaggtgtgacatcactagtattcattttatcaaatttttgtgttagtgcgtcaaccttagcagctagataatcaagggaagaaatt 25950988  T
Q  220 tattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |  |||||||||||| ||||||||||||||| |||||||||||||    
T  25950987 tcatacatacctgccccttttttagagggtgaagaagcagtgatg 25950943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 264
Target Start/End: Complemental strand, 18846328 - 18846150
Alignment:
Q  86 caatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatc 185  Q
    ||||||| ||||||| |||||| | |||||||||||| ||| |||| | || ||||| |||||||  ||| | | | ||||| ||||| |||| ||| ||    
T  18846328 caatatggccaaatacaccacaaacttcacaaggaggtgatacaggggcaggtgtgacagcactagtattcattgtatcaaatttttgtgttagtgcgtc 18846229  T
Q  186 aaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||||   || ||||||      || | ||  |||||| ||||||||||||||||||||| ||||||| |||||    
T  18846228 aaccttagcagttagatgatcaaggaaggaaatttcgtacatatctgcctcttttttagagggtgaagaagcattgatg 18846150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 4e-84; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 22827815 - 22827570
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||||    
T  22827815 tggttgtattgagcgtagttcatttgctcaatactattagcagcactacctaattgacaatcaacactaacatgaccaaatataccacagatttcacaag 22827716  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||||  |||  ||||||||| |||||||||||||| | ||||||||||||| | ||||||    
T  22827715 gaggagatgtaggagtaggtgtgacagcactaacattaagttttgaaaatctttgggttaatgcatcaaccttagtagcaaggtgatcatagtcagagac 22827616  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  |||||| |||||||||||||||||||||||||||| ||||||    
T  22827615 ttcgtacatatctgcctcttttttagagggtgtagaagcggtgatg 22827570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 22286917 - 22286662
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||||| || ||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| ||||||| ||||||||||||||||    
T  22286917 ctcgttccttggttgtttttagcgtagttcatttgctcaatactattagtagcgctacctaaatgacaatcaacaccaatatgcccaaatataccacaga 22286818  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  22286817 tttcacaaagaggagatgcaggagtaggtgcgatagcactaacatttagtttttcaaatttttgggttagtgcatcaaccttagcagcaaggtgatcata 22286718  T
Q  210 attagagacttattacatacctgcctcttt-tttagagggtgtagaagcagtgatg 264  Q
     | ||||||||  ||||||||||||| ||| |||| |||||||| |||| ||||||    
T  22286717 gtcagagacttcgtacatacctgcctttttctttaaagggtgtacaagcggtgatg 22286662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 18401202 - 18400948
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| |||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18401202 ctcgttccttggttatattgagcatagttcaattgctcaatactattagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacaga 18401103  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||| ||||||||||||| ||||| || | ||| |||| ||||||| ||||||||||| ||||||||||  |||||||| |||||| |||||||||| ||    
T  18401102 tttcgcaaggaggagatgtaggagaaggtatgacagcattaacattaagtttttcaaatttttgggttaaagcatcaactttagcagcaaggtgatcgta 18401003  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || ||||||||  || |||||| |||| ||||| |||||||||||||| ||||||    
T  18401002 atcagagacttcgtatatacctacctcctttttggagggtgtagaagcggtgatg 18400948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 264
Target Start/End: Complemental strand, 25469200 - 25468959
Alignment:
Q  23 tgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggagg 122  Q
    |||||||||||||||||| ||||| |||| |||| ||| ||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  25469200 tgtattgagcgtagttcaattgctcaatattattggcaacactacctaactgacaatcaacacctatatgaccaaatacaccacaaatttcacaaggagg 25469101  T
Q  123 agatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttat 222  Q
    ||||| || || || | ||| | || ||||||| ||||||||||| ||||| ||||  ||||||||||||||| ||||||||||||||| |||||| |      
T  25469100 agatgtagtagaaggtatgacaacattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagcaaggtgatcataatcagagacctca 25469001  T
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||| |||| ||||||||||||||||| || ||||||    
T  25469000 tacataccttcctcctttttagagggtgtagaggcggtgatg 25468959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 21823273 - 21823033
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||    
T  21823273 tggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatataccacagatttcacaag 21823177  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||||| ||| | ||||||    
T  21823176 gaggggatgcagaagaagttgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtgattatattcagagac 21823077  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||  |  |||||||||||||| |||||||| |||| ||| ||||    
T  21823076 ttcgtgtatacctgcctctttcttagagggagtaggagcggtga 21823033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 262
Target Start/End: Original strand, 22037842 - 22038075
Alignment:
Q  26 attgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggaggaga 125  Q
    |||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||| ||    
T  22037842 attgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatataccacagatttcacaaggagggga 22037938  T
Q  126 tgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattac 225  Q
    ||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| | ||||||||  ||     
T  22037939 tgcagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttatattcagagacttcgtat 22038038  T
Q  226 atacctgcctcttttttagagggtgtagaagcagtga 262  Q
    |||||||||||||| |||||||| |||| ||| ||||    
T  22038039 atacctgcctctttcttagagggagtaggagcggtga 22038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 22359309 - 22359097
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | |||||  ||   ||||||||||||||||||||||||| | ||||||||||| | |||||||||||||||||    
T  22359309 tggttgtattgagcgtagttcatttgttcaataccgttgatagcactacctaactgacaatcaacacctatatgaccaaaaacaccacagatttcacaag 22359210  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| || || || ||||| |||| ||||||| ||||||||||| ||||| ||||  ||||||||||||||| |||||||||| |||| ||||||    
T  22359209 gaggagatgtagtagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaaggcatcaaccttagcagcaaggtgatcgtaatcagagac 22359110  T
Q  219 ttattacatacct 231  Q
     |  |||||||||    
T  22359109 ctcgtacatacct 22359097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 22095141 - 22094910
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || |||||||||| |||||||||||||||| | ||||||||  |||||||||||| ||||||||    
T  22095141 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacttaactgacaatcaacacctatatgaccggatataccacagacttcacaag 22095045  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || ||||| | || |||| || ||||||||||| |||||||||| ||| |||||||||||| ||||||||| ||| | ||||||    
T  22095044 gaggggatgcagaagaaggtgtgacaacattaacgttaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtgattatattcagagac 22094945  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  22094944 tttgtatatacctgcctctttcttagagggagtag 22094910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 21951968 - 21951728
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| ||||||||||| |||| |||||    | |||| |||||||||||||  |||||||||||| | ||||||||  |||||||||||||||||||||    
T  21951968 tggttatattgagcgtaattcagttgct---cagtattggcagcactacctatttgacaatcaacaccgatatgaccggatataccacagatttcacaag 21951872  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || | || ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  21951871 gaggggatgcagaagaaggtgcgacaacattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttatattcagagac 21951772  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||  || |||||||||||||| |||||||| |||| ||| ||||    
T  21951771 ttcgtatatacctgcctctttcttagagggagtaggagcggtga 21951728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 8310368 - 8310137
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||| ||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  8310368 tggttgtattgagcgtaattcagttgctcaatg---tttgcaacactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 8310272  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    || | ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  8310271 gacgggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 8310172  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  8310171 ttcgtgtatacctgcctctttcttagagggagtag 8310137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 8327167 - 8327398
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  8327167 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 8327263  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| || || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  8327264 taggggatgcaggagaaggtggggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 8327363  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  8327364 ttcgtatatacctgcctctttcttagagggagtag 8327398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 264
Target Start/End: Original strand, 19291722 - 19291900
Alignment:
Q  86 caatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatc 185  Q
    ||||||| ||||||| |||||| | |||||||||||| ||| |||||| || ||||| |||||||  ||| | | | ||||| ||||| |||| ||| ||    
T  19291722 caatatggccaaatacaccacaaacttcacaaggaggtgatacaggagcaggtgtgacagcactagtattcattgtatcaaatttttgtgttagtgcgtc 19291821  T
Q  186 aaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||||   || ||||||      || | ||  |||||||||||||||||||||||||||| |||||||||||||    
T  19291822 aaccttagcagttagatgatcaagggaggaaattttgtacatacctgcctcttttttagagggtgaagaagcagtgatg 19291900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 21234531 - 21234493
Alignment:
Q  226 atacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  21234531 atacctgcctcttttttagatggtgaagaagcagtgatg 21234493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 23219020 - 23219061
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| ||| | |||||||    
T  23219020 tacatacctgcctcttttttagagggtgaagaggtagtgatg 23219061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 54882 - 55136
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |    
T  54882 ctcgttccttggttgtattgagcatagttcatttgctcaatactattagcagcactacctaactggcaatcaacacctatatgaccaaatataccacaaa 54981  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||| |||||||||||||| |||||||| ||||| ||||||||||||  |||||||||| |||||||||| |||||| ||||||||| |||||||||||||    
T  54982 ttttacaaggaggagatgtaggagtaggtgtgacagcactaacattatgtttttcaaatttttgggttagtgcatcgaccttagcagcaaggtgatcata 55081  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  |||||||||||||||||| ||||||||||||| || ||||||    
T  55082 ataagagacctcgtacatacctgcctcttttctagagggtgtagaggcggtgatg 55136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 12737558 - 12737321
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||    
T  12737558 tggttgtattgagcgtagttcatttgctcaatactattagcagcactacctaattgaaaatcaacacaaatatgaccaaatataccacagatttcacaag 12737459  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| |||||||| || || ||||||||||||  |||||||||| |||| ||||| |||||| ||||||||| ||| ||||||||||| ||||||    
T  12737458 gaggagatgtaggagtaggtgagacagcactaacattatgtttttcaaatttttcggttagtgcatccaccttagcagcaatgtgatcataatcagagac 12737359  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaag 256  Q
    ||  ||||||||||||||||||||||| ||||||||||    
T  12737358 ttcgtacatacctgcctcttttttagaaggtgtagaag 12737321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 11966390 - 11966635
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| |||| |||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11966390 ctcgttccttggttgtattgagcatagttcaattgctcaatattattagtagtactacttaactgacaatcaacaccaatatgaccaaatataccacaga 11966489  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttag-tttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcat 208  Q
    |||||||||||||||||| ||||| || ||||| | || ||||||| || ||||||||| ||||| ||||  ||||||||||| ||||||||||||||||    
T  11966490 tttcacaaggaggagatgtaggagaaggtgtgacatcattaacattaagttttttcaaatttttgagttaaggcatcaaccttggcaacaaggtgatcat 11966589  T
Q  209 aattagagacttattacatacctgcctcttttttagagggtgtaga 254  Q
    |||||||||| |  |||||||||||||| |||||||||||||||||    
T  11966590 aattagagacctcgtacatacctgcctcctttttagagggtgtaga 11966635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 260
Target Start/End: Complemental strand, 16527919 - 16527669
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||| ||| ||||| | ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16527919 ctcgttccttggttgtattaagcatagtttaattgctcaatactgttagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacaga 16527820  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||||  || ||||| |||| ||||||| ||||||||||| ||||| ||||  ||||||||||||||| | |||||||||||    
T  16527819 tttcacaaggaggagatgtaggaaaaggtgtgacagcattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagcgaggtgatcata 16527720  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagt 260  Q
    ||| ||||| |  |||||||||||||| ||||| ||||| ||||| |||||    
T  16527719 attggagacctcgtacatacctgcctcctttttggagggagtagaggcagt 16527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 13653913 - 13653662
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| || |||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13653913 ctcgttccttggttgtattgagcataattcaattgctcaatactattagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacaga 13653814  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||   ||||||| ||||| || ||||| |||| ||||||| ||||||||||| ||||| |||| |||||| ||||||||| |||||||||||||    
T  13653813 tttcacaa---ggagatgtaggagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaatgcatcgaccttagcagcaaggtgatcata 13653717  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || | |||| |  || |||||||||||  |||| ||||||||||| || ||||||    
T  13653716 atcaaagacctcgtaaatacctgcctcccttttggagggtgtagaggcggtgatg 13653662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 16469824 - 16470064
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| |||||||||||||||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  |||||||||| ||||||||||    
T  16469824 tggttatattgagcgtagttcagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatataccacatatttcacaag 16469920  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  16469921 gaggggatgcagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcttcaaccttagcagcaaggtggttatattcagagac 16470020  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||  || |||||||||||||| |||||||| |||| ||| ||||    
T  16470021 ttcgtatatacctgcctctttcttagagggagtaggagcggtga 16470064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 13373089 - 13373324
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | ||||| ||| | |||||| |||| ||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  13373089 tggttgtattgagcgtagttcatttgttcaataccattggaagcactgcctagctgacaatcaacacctatatgaccaaaaataccatagatttcacaag 13373188  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| || || || ||||| | || ||||||| ||||||||||| ||||| ||||  ||||||||||||||| ||||||| ||||||| |||||     
T  13373189 gaggagatgtagtagaaggtgtgacaacattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagcaaggtggtcataatcagagat 13373288  T
Q  219 ttattacatacctgcctcttttttagagggtgtaga 254  Q
     |  || ||||||||||| ||||| |||||||||||    
T  13373289 ctcgtaaatacctgcctcctttttggagggtgtaga 13373324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 16765325 - 16765457
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||| | ||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16765325 ctcgttccttggttgtattgagcatagtttaattgctcaatactgttagcagcactacctagctgacaatcaacaccaatatgaccaaatataccacaga 16765424  T
Q  110 tttcacaaggaggagatgcaggagtagatgtga 142  Q
    |||||||||||||||||| ||||| || |||||    
T  16765425 tttcacaaggaggagatgtaggagaaggtgtga 16765457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 12387606 - 12387782
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | ||||| ||| |||||||||||||||| |||||||||| | ||||||||||| | |||||| |||| |||||    
T  12387606 tggttgtattgagcgtagttcatttgttcaataccattggcagcactacctaactaacaatcaacacctatatgaccaaaaacaccacaaattt-acaag 12387704  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaa 196  Q
     ||||||||||| || || ||||| |||| ||||||| ||||||| ||| ||||| ||||  ||||||||||||||||    
T  12387705 aaggagatgcagtagaaggtgtgacagcattaacattaagttttttaaatttttgagttaaggcatcaaccttagcaa 12387782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 18275924 - 18275693
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||| || |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||   ||||||||| | ||||||||    
T  18275924 tggttgtattgagcataattcagttgctcaata---ttcgcagcactacctaactgacaatcaacacctatatgaccggttataccacaaacttcacaag 18275828  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||  ||||||| ||||||||||  |||||||||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  18275827 gaggggatgcagaagaaggtgggacagctttaacattaagtttttcaattttttgggttaatgcctcaaccttagcagcaaggtggttatattcagagac 18275728  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| ||| |||| ||||    
T  18275727 ttcgtatatacctgcctctttcttaaagggagtag 18275693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 13669736 - 13669505
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  13669736 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 13669640  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  13669639 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 13669540  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  13669539 ttcgtgtatacctgcctctttcttagagggagtag 13669505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 18597639 - 18597870
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| |||||| |    
T  18597639 tggttgtattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacatg 18597735  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||||| || || |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  18597736 taggggatgcaggagaaggtggggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 18597835  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  18597836 ttcgtgtatacctgcctctttcttagagggagtag 18597870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 264
Target Start/End: Original strand, 543330 - 543518
Alignment:
Q  76 caatcaacatcaatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttggg 175  Q
    |||||||  |||||||| ||||||| |||||| | |||||||||||| ||| |||||| || ||||| |||||||  ||| | | | ||||| |||||      
T  543330 caatcaatgtcaatatggccaaatacaccacaaacttcacaaggaggtgatacaggagcaggtgtgacagcactagtattcattgtatcaaatttttgtc 543429  T
Q  176 ttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||| ||| ||||||||||||   || ||||||      || | ||  |||||||||||||||||||||||||||| |||||||||||||    
T  543430 ttagtgcgtcaaccttagcagttagatgatcaagggaggaaattttgtacatacctgcctcttttttagagggtgaagaagcagtgatg 543518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 264
Target Start/End: Original strand, 16329089 - 16329267
Alignment:
Q  86 caatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatc 185  Q
    ||||||| ||||||| |||||| | |||||||||||| ||| |||||| || ||||| | |||||  ||| | | | ||||| ||||| |||| ||| ||    
T  16329089 caatatggccaaatacaccacaaacttcacaaggaggtgatacaggagcaggtgtgacaacactagtattcattgtatcaaatttttgtgttagtgcgtc 16329188  T
Q  186 aaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||||   || ||||||      || | ||  |||||||||||||||||||||||||||| |||||||||||||    
T  16329189 aaccttagcagttagatgatcaagggaggaaattttgtacatacctgcctcttttttagagggtgaagaagcagtgatg 16329267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 13632345 - 13632304
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  13632345 tacatacctgcctcttttttagagggtgaagaagcagtgatg 13632304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 13739025 - 13738984
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  13739025 tacatacctgcctcttttttagagggtgaagaagcagtgatg 13738984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 14547300 - 14547259
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14547300 tacatacctgcctcttttttagagggtgaagaagcagtgatg 14547259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 23511913 - 23511872
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  23511913 tacatacctgcctcttttttagagggtgaagaagcagtgatg 23511872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 8785661 - 8785702
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  8785661 tacatacctgcctcttttttagagggtgaagaagcaatgatg 8785702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 14228158 - 14228267
Alignment:
Q  86 caatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatc 185  Q
    ||||||| ||||||| |||||| | |||||||||||| ||| |||||| || ||||| |||||||  ||| | | | ||||| |||||  ||| ||| ||    
T  14228158 caatatggccaaatacaccacaaacttcacaaggaggtgatacaggagcaggtgtgacagcactagtattcattgtatcaaatttttgtcttagtgcgtc 14228257  T
Q  186 aaccttagca 195  Q
    ||||||||||    
T  14228258 aaccttagca 14228267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 25752 - 25506
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  25752 ctcgttccttggttgtattgagcgtagttcatttgctcaacaccattagcagcactacctaactgacaatcaacaccaatatgaccaaatataccacata 25653  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| | |||||| ||| ||||||| |||||| ||||||||||| |||| |||||  | ||  ||||||||| ||||||||||| |    
T  25652 tttcacaaggaggagatgtaagagtaggtgtaatagcaccaacattaagtttttcaaatttttcggttagcgtattcaccttagcagcaaggtgatcaaa 25553  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaag 256  Q
    || ||||||||  ||||||||||||||||||||||||||||||||||    
T  25552 ataagagacttcgtacatacctgcctcttttttagagggtgtagaag 25506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 4e-75; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 22321763 - 22322017
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  22321763 ctcgttccttggttgtattgagcatagttcaattgctcaatactattagtagcactacctaactgacaatcaacaccgatatgaccaaatataccacaga 22321862  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||||| || ||||| |||| ||||||| ||||||||||| ||||| ||||  ||||||||||||| | |||||||||||||    
T  22321863 tttcacaaggaggagatgtaggagaaggtgtgacagcattaacattaagtttttcaaatttttgagttaaggcatcaaccttagaagcaaggtgatcata 22321962  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  |||||||||||||| ||||| |||||||| ||||| ||||||    
T  22321963 atcagagacctcgtacatacctgcctcctttttggagggtgtggaagcggtgatg 22322017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 264
Target Start/End: Complemental strand, 21384174 - 21383931
Alignment:
Q  21 gttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaagga 120  Q
    |||||||||||| ||||||||||||| || || ||||||||||||||||| ||| ||||| ||| |||||||||||||  ||||||| ||||||||||||    
T  21384174 gttgtattgagcatagttcatttgctgaacaccattagcagcactacctagctggcaatctacaccaatatgaccaaaattaccacaaatttcacaagga 21384075  T
Q  121 ggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagactt 220  Q
    ||| ||||||||||||  |||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||| |||| |||||||  ||||||||||    
T  21384074 ggatatgcaggagtaggagtgacagcactaacatttagtttttcaaatttttgggttagtgcatcaactttagcagcaagatgatcatggttagagactt 21383975  T
Q  221 attacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
      ||||||||| |||||||||||||||||| |||||||||||||    
T  21383974 cgtacatacctccctcttttttagagggtgaagaagcagtgatg 21383931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 25120502 - 25120756
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||| | ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25120502 ctcgttccttggttgtattgagcatagtttaattgctcaatactgttagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacaga 25120601  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||||| || |||||   || ||||||| ||||||||||| ||||  ||||  ||||||||||||||| | |||||||||||    
T  25120602 tttcacaaggaggagatgtaggagaaggtgtgactacattaacattaagtttttcaaatttttcagttaaggcatcaaccttagcagcgaggtgatcata 25120701  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  ||||| |  |||||||||||||| ||||| ||||||||||| || ||||||    
T  25120702 atcggagacctcgtacatacctgcctcctttttggagggtgtagaggcggtgatg 25120756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 25179593 - 25179847
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||| | ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25179593 ctcgttccttggttgtattgagcatagtttaattgctcaatactgttagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacaga 25179692  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||||| || |||||   || ||||||| ||||||||||| ||||  ||||  ||||||||||||||| | |||||||||||    
T  25179693 tttcacaaggaggagatgtaggagaaggtgtgactacattaacattaagtttttcaaatttttcagttaaggcatcaaccttagcagcgaggtgatcata 25179792  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  ||||| |  |||||||||||||| ||||| ||||||||||| || ||||||    
T  25179793 atcggagacctcgtacatacctgcctcctttttggagggtgtagaggcggtgatg 25179847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 262
Target Start/End: Original strand, 30767437 - 30767686
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  30767437 ctcgttccttggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatataccacaga 30767533  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||| ||||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | |||    
T  30767534 tttcacaaggaggggatgcagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttata 30767633  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
     | ||||||||  || |||||||||||||| |||||||| |||| ||| ||||    
T  30767634 ttcagagacttcgtatatacctgcctctttcttagagggagtaggagcggtga 30767686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 264
Target Start/End: Original strand, 21274922 - 21275167
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||| |||||||||||| | ||||| ||| ||||||||||||||||||||||||||| | ||||||||||| | |||||| ||||||||||    
T  21274922 tggttgtattgagtgtagttcatttgttcaataccattggcagcactacctaactgacaatcaacacctatatgaccaaaaacaccacaaatttcacaag 21275021  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| || || || | ||| | || ||||||| ||||||||||| ||||| ||||  |||||||||||||||  |||||| ||| ||||||||||    
T  21275022 gaggagatgtagtagaaggtatgacaacattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagtaaggtggtcacaattagagac 21275121  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     |  || ||||||||||| ||||| ||||||||||| || ||||||    
T  21275122 ctcgtaaatacctgcctcctttttggagggtgtagaggcggtgatg 21275167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 264
Target Start/End: Original strand, 21276469 - 21276714
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||| |||||||||||| | ||||| ||| ||||||||||||||||||||||||||| | ||||||||||| | |||||| ||||||||||    
T  21276469 tggttgtattgagtgtagttcatttgttcaataccattggcagcactacctaactgacaatcaacacctatatgaccaaaaacaccacaaatttcacaag 21276568  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| || || || | ||| | || ||||||| ||||||| ||| ||||| ||||  ||||||| ||||||| ||||||||||||||| ||||||    
T  21276569 gaggagatgtagtagaaggtatgacaacattaacattaagttttttaaatttttgagttaaggcatcaaacttagcagcaaggtgatcataatcagagac 21276668  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     |   ||||| ||||||| ||||| ||||||||||| || ||||||    
T  21276669 ctcgaacatatctgcctcctttttggagggtgtagaggcggtgatg 21276714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 262
Target Start/End: Original strand, 20442510 - 20442759
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| |||| ||||| ||||   ||  |||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  20442510 ctcgttccttggttatattgagcgtaattcagttgctcaata---ttgacagcactacctaactgacaatcaacaccgatatgaccggatataccacaga 20442606  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||| | |||| || || || ||||| | || ||||||| ||||||||||| |||||||| | ||| |||||||||||| ||||||| | |||    
T  20442607 tttcacaaggaagggatgtagaagaaggtgtgacaacattaacattaagtttttcaaatttttgggtcaatgcctcaaccttagcagcaaggtggttata 20442706  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
     | ||||||||  || |||||||||||||| |||||||| |||||||| ||||    
T  20442707 ttcagagacttcgtatatacctgcctctttcttagagggagtagaagcggtga 20442759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 20618061 - 20617830
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  20618061 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 20617965  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  20617964 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 20617865  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  20617864 ttcgtgtatacctgcctctttcttagagggagtag 20617830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 24967516 - 24967747
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  24967516 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 24967612  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  24967613 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 24967712  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  24967713 ttcgtgtatacctgcctctttcttagagggagtag 24967747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 18069111 - 18069070
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  18069111 tacatacctgcctcttttttagagggtgaagaagcagtgatg 18069070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 20599834 - 20599875
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20599834 tacatacctgcctcttttttagagggtgaagaagcagtgatg 20599875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 20606131 - 20606172
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20606131 tacatacctgcctcttttttagagggtgaagaagcagtgatg 20606172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 20612450 - 20612491
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20612450 tacatacctgcctcttttttagagggtgaagaagcagtgatg 20612491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 21284233 - 21284274
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  21284233 tacatacctgcctcttttttagagggtgaagaagcagtgatg 21284274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 20794739 - 20794780
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  20794739 tacatacttgcctcttttttagagggtgaagaagcagtgatg 20794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 24216658 - 24216621
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagt 260  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  24216658 tacatacctggctcttttttagagggtgaagaagcagt 24216621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 264
Target Start/End: Original strand, 1261 - 1503
Alignment:
Q  21 gttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaagga 120  Q
    |||||||||||| || |||||||||| || || ||||||||||||||||| |||  |||||||| |||||||||||||||||||| | ||||||||||||    
T  1261 gttgtattgagcataattcatttgctcaacaccattagcagcactacctagctgggaatcaacaccaatatgaccaaatataccataaatttcacaagga 1360  T
Q  121 ggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagactt 220  Q
    || ||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||    
T  1361 ggggatgcaggagtaggtgtgacaacactaacatttagtttttc-aaattttgggttagtgcatcaaccttagcagcaagatgatcatagttagagactt 1459  T
Q  221 attacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
      |||||||||||||||||||||||||||  ||||| |||||||    
T  1460 cgtacatacctgcctcttttttagagggtaaagaagtagtgatg 1503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 22 - 264
Target Start/End: Original strand, 963 - 1205
Alignment:
Q  22 ttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggag 121  Q
    ||||||||||| || |||| ||| | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  963 ttgtattgagcataattcaattgatcaatactattagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacagatttcacaaggag 1062  T
Q  122 gagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagactta 221  Q
    |||||| ||||| || ||||| |||| ||||||| ||||||||||| ||||| |||| |||||| ||||||||| ||||||||||||||| |||||| |     
T  1063 gagatgtaggagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaatgcatcgaccttagcagcaaggtgatcataatcagagacctc 1162  T
Q  222 ttacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     || ||||||||||| ||||| ||||||||||| |||||||||    
T  1163 gtaaatacctgcctcctttttggagggtgtagaggcagtgatg 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 9e-73; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 8647611 - 8647397
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  8647611 tggttgtattaagcgtagttgatttgctcaatactattagcagcactacctaactgacaatcaacactaatatgaccaaatataccacagatttcacaag 8647512  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| |||||||| ||||| |||||||||||| | ||||| ||| |||||||| | |||||| ||||||||| ||||||||||||||| ||||||    
T  8647511 gaggagatgtaggagtaggtgtgacagcactaacattaaattttttaaatttttgggtgagtgcatccaccttagcagcaaggtgatcataatcagagac 8647412  T
Q  219 ttattacatacctgc 233  Q
    ||  |||||||||||    
T  8647411 ttcgtacatacctgc 8647397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 264
Target Start/End: Original strand, 8951749 - 8951994
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||| ||| || |||||||||| |||||||||||||||||||| |||||||||||||||| | |||| ||||||||||||||| ||||||||||    
T  8951749 tggttgtattaagcataattcatttgctcaatactattagcagcactacgtaactgacaatcaacacctatataaccaaatataccacaaatttcacaag 8951848  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||| ||| |||||||| ||||| | |||||||||| ||||||||||| |||||||||| |||||||||||| ||| ||||||| ||||| | ||||||    
T  8951849 gaggaaatgtaggagtaggtgtgacaacactaacattaagtttttcaaatttttgggttaatgcatcaaccttggcagcaaggtggtcatagtcagagac 8951948  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  |||||||||||||| ||||||||||||||||| || ||||||    
T  8951949 ttcgtacatacctgcctcctttttagagggtgtagaggcggtgatg 8951994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 22467298 - 22467533
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  22467298 tggttgtattgagcatagttcaattgctcaatactattagtagcactacctaaccgacaatcaacaccaatatgaccaaatataccacagatttcacaag 22467397  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||||||||  |||| || |||||  ||| ||| ||| ||||||||||| ||||| ||||  ||||||||||||||| ||||||||||||||| ||||||    
T  22467398 gaggagatgtgggagaaggtgtgactgcattaaaattaagtttttcaaatttttgagttaaggcatcaaccttagcagcaaggtgatcataatcagagac 22467497  T
Q  219 ttattacatacctgcctcttttttagagggtgtaga 254  Q
     |  |||||||||||||| ||||| |||||||||||    
T  22467498 ctcgtacatacctgcctcctttttggagggtgtaga 22467533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 52952115 - 52952369
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||| ||| ||||| | ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  52952115 ctcgttccttggttgtatttagcatagtttaattgctcaatactattagtagcactacctaactgacaatcaacaccaatatgaccaaatataccataga 52952214  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||  |||||||||| ||||| || ||||| |||| ||||||| ||||||||||| ||||| ||||  |||||||||||||||  ||||||||||||    
T  52952215 tttcacttggaggagatgtaggagaaggtgtgacagcattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagtaaggtgatcata 52952314  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  ||||||||| |||| ||||| ||||| ||||| || ||||||    
T  52952315 atcagagacctcgtacatacctacctcctttttggagggcgtagaggcggtgatg 52952369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 20233428 - 20233177
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| ||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| | |||||| |  ||||||||||||    
T  20233428 ctcgttccttggttatattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgatcggatataccacaga 20233332  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||| ||||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | |||    
T  20233331 tttcacaaggaggggatgcagaaggaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggttata 20233232  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     | ||||||||  || |||||||||||||| |||||||| |||  ||||||||||    
T  20233231 ttcagagacttcgtatatacctgcctctttcttagagggagtaagagcagtgatg 20233177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 19786464 - 19786596
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |    
T  19786464 ctcgttccttggttgtattgagagtagttcatttgctcaatactattagcagcactacctaacggacaatcaacaccaatatgaccaaatataccacata 19786563  T
Q  110 tttcacaaggaggagatgcaggagtagatgtga 142  Q
    ||||||||||||||||||| ||||||| |||||    
T  19786564 tttcacaaggaggagatgcgggagtaggtgtga 19786596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 21803019 - 21803250
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  21803019 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 21803115  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  21803116 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 21803215  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||| ||||||| |||||||| ||||    
T  21803216 ttcgtgtatacctacctctttcttagagggagtag 21803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 22843622 - 22843391
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  22843622 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 22843526  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  22843525 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 22843426  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  22843425 ttcgtgtatacctgcctctttcttagagggagtag 22843391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 19786597 - 19786671
Alignment:
Q  182 catcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaag 256  Q
    |||||||||||| | |||||| |||||| | ||||||||  |||||| |||||||||||||||||||||||||||    
T  19786597 catcaaccttagaagcaaggttatcatagtcagagacttcgtacatagctgcctcttttttagagggtgtagaag 19786671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 16399395 - 16399432
Alignment:
Q  213 agagacttattacatacctgcctcttttttagagggtg 250  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  16399395 agagacttcatacatacctgcctcttttttagagggtg 16399432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 48 - 249
Target Start/End: Original strand, 44338 - 44539
Alignment:
Q  48 aatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagca 147  Q
    |||||||||| ||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  44338 aatactattaacagcactacctaactgataatcagcaccaatatgactaaatataccacagatttcacagggaggagatgtaggagtaggtgtgacagca 44437  T
Q  148 ctaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagg 247  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| ||||||||||  |||||||||||||||||||||||||    
T  44438 ctaacatttagtttttcaaatttttgggttagtgcatcaaccttagcagcaagttgatcatagttagagacttcgtacatacctgcctcttttttagagg 44537  T
Q  248 gt 249  Q
    ||    
T  44538 gt 44539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 2159 - 1919
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  2159 ctcgttctttggttgtattgagcatagttcaattgctcaatactattagtagcactacctaattgacaatcaacaccaaaatgaccaaatataccacaga 2060  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||||| || ||||| || | ||||||||||||||||||| ||||| ||||  ||||||||||||||| |||||||||||||    
T  2059 tttcacaaggaggagatgtaggagaaggtgtgacagtattaacatttagtttttcaaatttttgagttaaggcatcaaccttagcagcaaggtgatcata 1960  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgt 251  Q
    |  |||||| |  |||||||||||||| ||||| ||||||||    
T  1959 a-cagagacctcgtacatacctgcctcctttttggagggtgt 1919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 633 - 887
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| |    
T  633 ctcgttccttggttgtattgagcatagttcaattgctcaatactattagtagcaatacataactgacaatcaacaccaatatgaccaaatataccacaaa 732  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||| ||| ||||| || ||||| |||| ||||||| ||||||||||| ||||| || |  ||||||||||||||| |||||||||||||    
T  733 tttcacaaggaggatatgtaggagaaggtgtgacagcattaacattaagtttttcaaatttttgagtcaaggcatcaaccttagcagcaaggtgatcata 832  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  |||||||||||||| ||||| | ||||||||| || ||||||    
T  833 atcagagacctcatacatacctgcctcctttttggtgggtgtagaggcggtgatg 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 18070 - 18180
Alignment:
Q  144 agcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctctttttta 243  Q
    |||| ||||||| ||||||||||| ||||| |||| |||||||||||| ||| ||||||||||||| || ||||| |  |||||||||||||| |||||     
T  18070 agcattaacattaagtttttcaaatttttgagttaatgcatcaaccttggcagcaaggtgatcatagttggagacctcgtacatacctgcctcctttttg 18169  T
Q  244 gagggtgtaga 254  Q
    ||||| |||||    
T  18170 gagggcgtaga 18180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 45413 - 45667
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| |||||||| || |||| ||||| |||| |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  45413 ctcgttccttggttatattgagcataattcaattgctcaataatattagtagcactacctaactgacaatcaacaccaatatgatcaaatataccacaga 45512  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||| | ||||| || ||||| |||| ||||||| ||||||||||| ||||| |||| |||||| ||||||||| |||||||||||||    
T  45513 tttcacaaggaggagaagtaggagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaatgcatcgaccttagcagcaaggtgatcata 45612  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  || ||||||||||| ||||| ||||||||||| || ||||||    
T  45613 atcagagacctcgtaaatacctgcctcctttttggagggtgtagaggcggtgatg 45667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 5832 - 6086
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| |||||||| || |||| ||||| |||| |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  5832 ctcgttccttggttatattgagcataattcaattgctcaataatattagtagcactacctaactgacaatcaacaccaatatgatcaaatataccacaga 5931  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||| | ||||| || ||||| |||| ||||||| ||||||||||| ||||| |||| |||||| ||||||||| |||||||||||||    
T  5932 tttcacaaggaggagaagtaggagaaggtgtgacagcattaacattgagtttttcaaatttttgagttaatgcatcgaccttagcagcaaggtgatcata 6031  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    || |||||| |  || ||||||||||| ||||| ||||||||||| || ||||||    
T  6032 atcagagacctcgtaaatacctgcctcctttttggagggtgtagaggcggtgatg 6086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 15264409 - 15264649
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| ||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||    
T  15264409 tggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatataccacagatttcacaag 15264505  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| | ||||| || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||| ||||||| ||||||||| ||| | ||||||    
T  15264506 gagggggtgcagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaatcttagcagcaaggtgattatattcagagac 15264605  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||  |  ||||||||||||||||||||||| |||| ||| ||||    
T  15264606 ttcgtgtatacctgcctcttttttagagggagtaggagcggtga 15264649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 15250232 - 15249992
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| ||||||||||| |||| ||||| |||    |||||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||    
T  15250232 tggttatattgagcgtaattcagttgctcaatg---ttagcagcactacctaactgacaatcaacaccgatatgaccggatataccacagatttcacaag 15250136  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| |||| || || || ||||| |||| ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||||| ||  | ||||||    
T  15250135 gaggggatgtagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtgattatcttcagagac 15250036  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||  |  ||||||| |||||| |||||||| |||| ||| ||||    
T  15250035 ttcgtgtatacctgtctctttcttagagggagtaggagcggtga 15249992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 22106861 - 22106629
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||    || ||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  22106861 tggttgtattgagcgtaattcagttgctcaatg---ttggcagcactacctaactgacaatcaacacctatatgaccagttataccacagatttcacaag 22106765  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttg-ggttattgcatcaaccttagcaacaaggtgatcataattagaga 217  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  |||||  |||| ||| |||||||||||| ||||||| | ||| | |||||    
T  22106764 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgttgttaatgcctcaaccttagcagcaaggtggttatattcagaga 22106665  T
Q  218 cttattacatacctgcctcttttttagagggtgtag 253  Q
    |||  |  |||||||||||||| |||||||| ||||    
T  22106664 cttcgtgtatacctgcctctttcttagagggagtag 22106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 1461 - 1692
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||| ||||||||    
T  1461 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctgtatgaccagttataccacagacttcacaag 1557  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
     ||| |||||||| | || |  |  |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  1558 taggggatgcaggggaaggttgggcagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 1657  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  || |||||||||||||| |||||||| ||||    
T  1658 ttcgtatatacctgcctctttcttagagggagtag 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 15858011 - 15857903
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||| | ||||||||| | | |||||| ||||||||||    
T  15858011 tggttgtattgagcgtagttcatttgttcaataccattggcagcactacctaactgacaatcaacacctatatgaccagaaacaccacaaatttcacaag 15857912  T
Q  119 gaggagatg 127  Q
    |||||||||    
T  15857911 gaggagatg 15857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 11920629 - 11920871
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||||| || ||  | |  ||||||||||| ||| ||||||||| ||||||| ||||||| |||||| |||||||||     
T  11920629 tggttgtattgagcgtagttcatttgctcaacaccttcaatagcactacctagctggcaatcaacaccaatatggccaaatacaccacaaatttcacaat 11920728  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||| |||||  ||  |||| | || ||||||| | ||| ||||| ||| | || | ||| |||||||||||| | || ||||||     ||| |     
T  11920729 gaggtgatacaggaacaggagtgacaacagtaacattcattttgtcaaattttagtgtaagtgcgtcaaccttagcagctagatgatcaaggaaagaaat 11920828  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtg 261  Q
    ||  || ||||||||||||||||||||||||| ||||||||||    
T  11920829 ttcatagatacctgcctcttttttagagggtgaagaagcagtg 11920871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 15303891 - 15303758
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||| ||||||||||| |||| ||||| ||||   || || |||||||| ||||||||||||||| | ||||||||  |||||||||||||||||||||    
T  15303891 tggttatattgagcgtaattcagttgctcaata---ttggcggcactacccaactgacaatcaacaccgatatgaccggatataccacagatttcacaag 15303795  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatt 155  Q
    |||| ||||||| || || ||||| | || |||||||    
T  15303794 gaggggatgcagaagaaggtgtgacaacattaacatt 15303758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 116855 - 116620
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    |||||||||||||||||||||||||| | ||||| ||| ||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||    
T  116855 tggttgtattgagcgtagttcatttgttcaataccattggcagcactacctagctgacaatcaacacctatatgaccaaaaataccacagatttcacaag 116756  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    || |||||| || || || ||||| |||| ||||||| ||||||||||| ||||| ||||  ||||||||||||| | ||||||||||||||| ||||||    
T  116755 gatgagatgtagtagaaggtgtgacagcattaacattaagtttttcaaatttttgagttaaggcatcaaccttagaagcaaggtgatcataatcagagac 116656  T
Q  219 ttattacatacctgcctcttttttagagggtgtaga 254  Q
     |  |||||||||||||| ||||| |||||||||||    
T  116655 ctcgtacatacctgcctcctttttggagggtgtaga 116620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 254
Target Start/End: Complemental strand, 188126 - 187882
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| || | ||| || ||||||||||||| ||||||||||||||||||||||||    
T  188126 ctcgttccttggttgtattgagcatagttcaattgctcaatactattagtagtattacttatctgacaatcaacaccaatatgaccaaatataccacaga 188027  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    |||||||||||||||||| ||||| || ||||| |||| ||||||| |||||||| || ||||| ||||  ||||||||||||||| | |||||||||||    
T  188026 tttcacaaggaggagatgtaggagaaggtgtgacagcattaacattaagtttttctaatttttgagttaaggcatcaaccttagcagcgaggtgatcata 187927  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtaga 254  Q
     | |||||| |  |||||||||||||| ||||| |||||||||||    
T  187926 gtcagagacctcgtacatacctgcctcctttttggagggtgtaga 187882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 264
Target Start/End: Complemental strand, 5994 - 5752
Alignment:
Q  22 ttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaaggag 121  Q
    ||||||||||| || || | ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5994 ttgtattgagcataatttaattgctaaatactgttagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacagatttcacaaggag 5895  T
Q  122 gagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagactta 221  Q
    |||||| ||||| || ||||| |||  | || || ||||||||||| ||||| ||||| ||||||||||||||| | |||||||||||||  ||||| |     
T  5894 gagatgtaggagaaggtgtgacagcttttactttaagtttttcaaatttttgagttatggcatcaaccttagcagcgaggtgatcataatcggagacctc 5795  T
Q  222 ttacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     |||||||||||||| ||||| ||||||||||| || ||||||    
T  5794 gtacatacctgcctcctttttggagggtgtagaggcggtgatg 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 264
Target Start/End: Original strand, 367677 - 367922
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||| |||||||||||| | ||||| ||| ||||||||||||| ||||||||||||| | || |||||||| |||||||||||||||||||    
T  367677 tggttgtattgagtgtagttcatttgttcaataccattggcagcactacctagctgacaatcaacacctatttgaccaaaaataccacagatttcacaag 367776  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    ||||||||| || || || ||||| |||| ||||||| ||||||| ||| ||||  ||||  ||||||||||||||| ||||||||||| ||| ||||||    
T  367777 gaggagatgtagtagaaggtgtgacagcattaacattgagttttttaaattttttagttaaggcatcaaccttagcagcaaggtgatcaaaatcagagac 367876  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
     |  |||||||||||||| ||||| ||||| ||||| || ||||||    
T  367877 ctcgtacatacctgcctcctttttggagggcgtagaggcggtgatg 367922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1589 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1589
Description:

Target: scaffold1589; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 264
Target Start/End: Original strand, 887 - 1131
Alignment:
Q  21 gttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatc-aacatcaatatgaccaaatataccacagatttcacaagg 119  Q
    ||||||||| |||||||||||||| | ||||| ||| ||||||||||||||||||||||| |||| | ||||||||||| | |||||| ||||||||||     
T  887 gttgtattgggcgtagttcatttgttcaataccattggcagcactacctaactgacaatctaacacctatatgaccaaaaacaccacaaatttcacaaga 986  T
Q  120 aggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagact 219  Q
    |||||||| || || || ||||| || | ||| ||| ||||||||||| ||||| ||||  ||||||||||||| | ||||||||||||||| ||||||     
T  987 aggagatgtagtagaaggtgtgacagtattaaaattaagtttttcaaatttttgagttaaggcatcaaccttaggagcaaggtgatcataatcagagacc 1086  T
Q  220 tattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |  |||||||||||||| ||||| |||||||||||||| ||||||    
T  1087 tcgtacatacctgcctcctttttggagggtgtagaagcggtgatg 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 538 - 770
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| || || | ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  538 ctcgttccttggttgtattgagcataatttaattgctcaatactgttagtagcactacctaactgacaatcaacaccaatatgaccaaatataccacaga 637  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||| |||||| || || || ||||| | || ||||||| ||||||||||| ||||  ||||  ||||||||||||||| | |||||||||||    
T  638 tttcacaaggaagagatgtagcagaaggtgtgacaacattaacattaagtttttcaaattttttagttaaggcatcaaccttagcagcgaggtgatcata 737  T
Q  210 attagagacttattacatacctgcctctttttt 242  Q
    ||  ||||| |  |||||||||||||| |||||    
T  738 atcggagacctcgtacatacctgcctccttttt 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 17233 - 17032
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||| | ||||||||||| | ||||| ||| ||||||||||||||||||||||||||| | ||||||||||| | |||||| |    
T  17233 ctcgttccttggttgtattgaacatagttcatttgttcaataccattggcagcactacctaactgacaatcaacacctatatgaccaaaaacaccacaaa 17134  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||| |||||||| || || || ||||| |||| ||||||| ||||||||||| ||||| ||||  ||||||||||||||| |||||||||||||    
T  17133 tttcacaagaaggagatgtagtagaaggtgtgacagcattaacattaagtttttcaaatttttgagttaaggcatcaaccttagcagcaaggtgatcata 17034  T
Q  210 at 211  Q
    ||    
T  17033 at 17032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 262
Target Start/End: Complemental strand, 26409 - 26160
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  ||||| |||||||| || |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  26409 ctcgttccttggttatattgagcctaattcaattgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatataccacaga 26313  T
Q  110 tttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcata 209  Q
    ||||||||||||| |||| || || || ||||| |||| ||||||| ||||||||||| |||||||| | ||| |||||||||||| ||||||| | |||    
T  26312 tttcacaaggaggggatgtagaagaaggtgtgacagcattaacattaagtttttcaaatttttgggtcaatgcctcaaccttagcagcaaggtggttata 26213  T
Q  210 attagagacttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
     | ||||||||  || || ||||||||||| |||||||| |||||||| ||||    
T  26212 ttcagagacttcgtatatgcctgcctctttcttagagggagtagaagcggtga 26160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 23488 - 23243
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||||||||| || ||  | |  ||||||||||| ||| ||||||||| ||||||| ||||||| |||||| ||||||||||    
T  23488 tggttgtattgagcgtaattcatttgctcaacaccttaaatagcactacctagctggcaatcaacaccaatatgtccaaatacaccacaaatttcacaag 23389  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||  ||| || |||| | ||||| |||| ||||||| | ||||||||| |||||||| | ||| |||||||||||| |||| ||||||    |||||||    
T  23388 gagatgatacaagagttggtgtgacagcattaacattcattttttcaaacttttgggtgagtgcgtcaaccttagcagcaagatgatcaagggtagagac 23289  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  ||||||||||||||||||||  |||||| |||||||||||||    
T  23288 ttcgtacatacctgcctcttttttgaagggtgaagaagcagtgatg 23243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 35373 - 35133
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| |||  | |   |||||||||||||||||||||||||| | ||||||||   ||||||||||| ||||||||    
T  35373 tggttgtattgagcgtaattcagttgctcaatttttt---cagcactacctaactgacaatcaacacctatatgaccggttataccacagacttcacaag 35277  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || | || ||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  35276 gaggggatgcagaagaaggtgggacaacattaacattaagtttttcaaatttttgggttaatgcctcaaccttagcagcaaggtggtgatattcagagac 35177  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtga 262  Q
    ||  || |||||||||||||| |||||||| |||| ||| ||||    
T  35176 ttcgtatatacctgcctctttcttagagggagtaggagcggtga 35133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 7198 - 6967
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||||||||||| |||| ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||   ||||||||||| ||||||||    
T  7198 tggttgtattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaacacctatatgaccggttataccacagacttcacaag 7102  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||||||| || || || || |||| ||||||| ||||||||||  ||||| |||| ||| |||||||||||| ||||||| | ||| | ||||||    
T  7101 gaggggatgcagaagaaggtgggacagcattaacattaagtttttcaattttttgtgttaatgcctcaaccttagcagcaaggtggttatattcagagac 7002  T
Q  219 ttattacatacctgcctcttttttagagggtgtag 253  Q
    ||  |  |||||||||||||| |||||||| ||||    
T  7001 ttcgtgtatacctgcctctttcttagagggagtag 6967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 9 - 126
Alignment:
Q  146 cactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttaga 245  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| ||||||||||  |||||||||||||||||||||||    
T  9 cactaacatttagtttttcaaa-ttttgggttagtgcatcaaccttagcagcaagatgatcatagttagagacttcgtacatacctgcctcttttttaga 107  T
Q  246 gggtgtagaagcagtgatg 264  Q
    ||||  ||||| |||||||    
T  108 gggtaaagaagtagtgatg 126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 6384 - 6491
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacaga 109  Q
    |||||||  |||||||||||||| ||||||| ||||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||| |    
T  6384 ctcgttccttggttgtattgagcatagttcaattgctcaatactattagtagcattacctaactgacaatcaacaccaatatgaccaaatataccacata 6483  T
Q  110 tttcacaa 117  Q
    ||||||||    
T  6484 tttcacaa 6491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 524011 - 523766
Alignment:
Q  19 tggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacagatttcacaag 118  Q
    ||||||||| ||||||| |||||||||| || ||  | |  ||||||||||| ||| ||||||||| ||||||| || || | |||||| ||||||||||    
T  524011 tggttgtatagagcgtaattcatttgctcaacaccttcaatagcactacctagctggcaatcaacaccaatatggccgaaaacaccacaaatttcacaag 523912  T
Q  119 gaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagac 218  Q
    |||| ||| |||| | |   |||| ||| |||||||| | ||| ||||| ||||| || | ||  ||||| |||||| |||| |||| |    ||||||     
T  523911 gaggtgatacaggggcaatagtgacagcgctaacattcattttatcaaatttttgtgtgagtgtgtcaactttagcagcaagatgattaagggtagagaa 523812  T
Q  219 ttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||  ||||||||||||||||| |||||||||| |||||||||||||    
T  523811 ttcgtacatacctgcctctttgttagagggtgaagaagcagtgatg 523766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 177 - 59
Alignment:
Q  144 agcactaacatttagtttttcaaaattttgggttattgcatcaaccttagcaacaaggtgatcataattagagacttattacatacctgcctctttttta 243  Q
    |||| ||||||| ||||||||||| ||||  |||| ||| |||||||||||| ||||||| | ||||| ||||||||  || |||||||||||||| |||    
T  177 agcattaacattaagtttttcaaatttttatgttaatgcttcaaccttagcagcaaggtggttataatcagagacttcgtatatacctgcctctttctta 78  T
Q  244 gagggtgtagaagcagtga 262  Q
    ||||| |||| ||| ||||    
T  77 gagggagtaggagcggtga 59  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 271 - 176
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaacatcaatatgaccaaatataccacag 108  Q
    |||||||  ||||| ||||||||||| || | ||||| ||||   || ||||||||||||||||||||||||||| | ||||||||  |||||| ||||    
T  271 ctcgttccttggttatattgagcgtaatttagttgctcaata---ttggcagcactacctaactgacaatcaacaccgatatgaccggatatactacag 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 10974 - 11015
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  10974 tacatacctgcctcttttttagagggtgaagaagcagtgatg 11015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 119592 - 119551
Alignment:
Q  223 tacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  119592 tacatacctgcctcttttttagagggtgaagaagcagtgatg 119551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 119286 - 119215
Alignment:
Q  10 ctcgttcactggttgtattgagcgtagttcatttgcttaatactattagcagcactacctaactgacaatcaaca 84  Q
    |||||||  ||||| ||||||||||| |||| ||||| ||||   || |||||||||||||||||||||||||||    
T  119286 ctcgttccttggttatattgagcgtaattcagttgctcaata---ttggcagcactacctaactgacaatcaaca 119215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 264
Target Start/End: Original strand, 53962 - 54140
Alignment:
Q  86 caatatgaccaaatataccacagatttcacaaggaggagatgcaggagtagatgtgatagcactaacatttagtttttcaaaattttgggttattgcatc 185  Q
    ||||||| ||||||| |||||| | |||||||||||| ||| |||||| || ||||| | |||||  ||| | | | ||||| ||||| |||| ||| ||    
T  53962 caatatggccaaatacaccacaaacttcacaaggaggtgatacaggagcaggtgtgacaacactagtattcattgtatcaaatttttgtgttagtgcgtc 54061  T
Q  186 aaccttagcaacaaggtgatcataattagagacttattacatacctgcctcttttttagagggtgtagaagcagtgatg 264  Q
    ||||||||||   || ||||||      || | ||  ||||||||||| |||||||||||||||| ||||| |||||||    
T  54062 aaccttagcagttagatgatcaagggaggaaattttgtacatacctgcttcttttttagagggtgaagaagtagtgatg 54140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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