View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12732_low_6 (Length: 245)
Name: NF12732_low_6
Description: NF12732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12732_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 39440242 - 39440458
Alignment:
| Q |
19 |
ggtataccattatattttttcaa-gtagacttactatattgtgctgattagccatagaaatactcacaatctgcacggttgatttgctctcattttattt |
117 |
Q |
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| T |
39440242 |
ggtataccattatattttttcaaagtagacttactatattgtgctgattagccatagaaatactcacaatctgcacggtttatttgctctcattttattt |
39440341 |
T |
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| Q |
118 |
tagtgactgattgatagttaaagacttctaataattacttattagcatagtaatggataaaaagtatgcctatacatataatgaagttctaattctttct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39440342 |
tagtgactgattgatagttaaagacttctaataattacttattagcatagtaatggataaaaagtatgcctatacatataatgaagttctaattctttct |
39440441 |
T |
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| Q |
218 |
ctgtttcttgaggtctg |
234 |
Q |
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| T |
39440442 |
ctgtttcttgaagtctg |
39440458 |
T |
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