View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12733_low_14 (Length: 255)

Name: NF12733_low_14
Description: NF12733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12733_low_14
NF12733_low_14
[»] chr4 (57 HSPs)
chr4 (16-253)||(45460499-45460743)
chr4 (21-253)||(30236035-30236266)
chr4 (66-253)||(13811174-13811362)
chr4 (71-253)||(18495952-18496134)
chr4 (16-253)||(44054307-44054537)
chr4 (66-198)||(43282986-43283118)
chr4 (18-227)||(33738613-33738818)
chr4 (70-207)||(52267059-52267196)
chr4 (79-251)||(15043381-15043553)
chr4 (79-251)||(15110871-15111043)
chr4 (66-172)||(16395671-16395776)
chr4 (66-186)||(44345260-44345378)
chr4 (18-143)||(12837920-12838042)
chr4 (66-143)||(14899970-14900047)
chr4 (66-182)||(53909390-53909504)
chr4 (18-183)||(16366320-16366479)
chr4 (18-143)||(12901365-12901491)
chr4 (66-142)||(41257951-41258030)
chr4 (18-105)||(20813647-20813740)
chr4 (21-143)||(21961161-21961286)
chr4 (97-141)||(10239037-10239081)
chr4 (18-152)||(13244743-13244872)
chr4 (96-152)||(53706454-53706510)
chr4 (68-182)||(10642612-10642724)
chr4 (66-143)||(8874086-8874161)
chr4 (97-142)||(5372297-5372342)
chr4 (68-152)||(9293950-9294032)
chr4 (16-143)||(22356147-22356276)
chr4 (18-54)||(53909563-53909599)
chr4 (18-53)||(8372756-8372791)
chr4 (18-53)||(26678326-26678361)
chr4 (98-143)||(12245854-12245899)
chr4 (43-143)||(14994678-14994774)
chr4 (98-143)||(15852918-15852963)
chr4 (97-142)||(17377039-17377084)
chr4 (97-142)||(50223761-50223806)
chr4 (40-143)||(15274343-15274442)
chr4 (18-54)||(19699421-19699457)
chr4 (18-54)||(19710006-19710042)
chr4 (64-143)||(19999024-19999101)
chr4 (18-54)||(34393536-34393572)
chr4 (18-53)||(7134319-7134354)
chr4 (18-53)||(18167023-18167058)
chr4 (18-53)||(22356433-22356468)
chr4 (30-111)||(53706515-53706591)
chr4 (66-143)||(109981-110056)
chr4 (67-143)||(5684487-5684561)
chr4 (73-121)||(7848856-7848902)
chr4 (102-143)||(34197767-34197808)
chr4 (101-142)||(47469936-47469977)
chr4 (66-182)||(54119849-54119963)
chr4 (64-143)||(15138142-15138219)
chr4 (17-53)||(16521044-16521080)
chr4 (64-143)||(18246687-18246764)
chr4 (18-58)||(19998937-19998977)
chr4 (107-143)||(27959563-27959599)
chr4 (64-143)||(47355822-47355899)
[»] chr3 (87 HSPs)
chr3 (17-253)||(14287475-14287709)
chr3 (17-253)||(11062579-11062812)
chr3 (24-253)||(35122075-35122302)
chr3 (17-253)||(12563023-12563258)
chr3 (66-253)||(40938160-40938347)
chr3 (83-253)||(14291897-14292068)
chr3 (31-253)||(53900064-53900284)
chr3 (66-251)||(14522895-14523080)
chr3 (66-253)||(14296926-14297113)
chr3 (66-253)||(14302553-14302740)
chr3 (18-253)||(6148348-6148573)
chr3 (18-227)||(17099063-17099267)
chr3 (66-251)||(17137895-17138079)
chr3 (66-213)||(17536533-17536680)
chr3 (66-251)||(12951477-12951665)
chr3 (86-251)||(11883813-11883978)
chr3 (66-226)||(16183579-16183738)
chr3 (17-143)||(47786463-47786587)
chr3 (66-251)||(15516126-15516307)
chr3 (69-251)||(39654340-39654529)
chr3 (18-226)||(30204845-30205046)
chr3 (17-183)||(11199103-11199265)
chr3 (66-143)||(14060835-14060912)
chr3 (21-143)||(7852256-7852374)
chr3 (16-143)||(319206-319335)
chr3 (66-182)||(11813330-11813444)
chr3 (66-183)||(19572389-19572503)
chr3 (17-143)||(50113720-50113842)
chr3 (66-143)||(38812589-38812669)
chr3 (163-253)||(14522851-14522943)
chr3 (18-143)||(51160066-51160186)
chr3 (18-194)||(22145829-22146000)
chr3 (66-142)||(33370962-33371041)
chr3 (17-143)||(12351438-12351559)
chr3 (68-182)||(25057273-25057385)
chr3 (97-143)||(5229675-5229721)
chr3 (66-143)||(8630338-8630413)
chr3 (163-253)||(17099243-17099331)
chr3 (97-142)||(9592349-9592394)
chr3 (66-152)||(17957985-17958069)
chr3 (16-182)||(30141329-30141499)
chr3 (97-143)||(47983418-47983464)
chr3 (97-143)||(47992705-47992751)
chr3 (97-143)||(48001992-48002038)
chr3 (97-143)||(48011278-48011324)
chr3 (163-219)||(15516301-15516358)
chr3 (97-142)||(41660135-41660180)
chr3 (18-53)||(7851991-7852026)
chr3 (18-53)||(11813209-11813244)
chr3 (18-53)||(12796873-12796908)
chr3 (18-53)||(16819190-16819225)
chr3 (18-53)||(18908922-18908957)
chr3 (34-143)||(19945098-19945202)
chr3 (18-53)||(38166363-38166398)
chr3 (18-143)||(49230667-49230787)
chr3 (66-143)||(17913834-17913909)
chr3 (21-58)||(7852122-7852159)
chr3 (21-58)||(7852188-7852225)
chr3 (43-143)||(15574524-15574620)
chr3 (43-143)||(15613543-15613639)
chr3 (98-143)||(15874686-15874731)
chr3 (43-143)||(23081746-23081842)
chr3 (98-143)||(48420193-48420238)
chr3 (98-139)||(55442367-55442408)
chr3 (18-50)||(13816026-13816058)
chr3 (64-143)||(14846243-14846320)
chr3 (64-143)||(16819405-16819482)
chr3 (68-143)||(23491006-23491079)
chr3 (21-53)||(49230542-49230574)
chr3 (18-53)||(2451164-2451199)
chr3 (18-53)||(11812950-11812985)
chr3 (101-143)||(15989507-15989550)
chr3 (18-53)||(19944954-19944989)
chr3 (18-53)||(22273277-22273312)
chr3 (18-53)||(30141133-30141168)
chr3 (66-143)||(16259544-16259619)
chr3 (66-143)||(19230550-19230625)
chr3 (66-143)||(33340341-33340416)
chr3 (16-58)||(38166435-38166477)
chr3 (98-143)||(12490331-12490376)
chr3 (66-182)||(15860767-15860881)
chr3 (68-143)||(2048561-2048634)
chr3 (64-143)||(2450908-2450985)
chr3 (64-143)||(12266071-12266148)
chr3 (213-253)||(17523951-17523991)
chr3 (64-143)||(18909188-18909265)
chr3 (64-143)||(22273543-22273620)
[»] chr7 (52 HSPs)
chr7 (17-250)||(16571642-16571872)
chr7 (17-250)||(16593790-16594020)
chr7 (66-239)||(49049353-49049527)
chr7 (17-254)||(15629153-15629389)
chr7 (66-253)||(13273172-13273360)
chr7 (17-253)||(12249659-12249892)
chr7 (66-227)||(15824018-15824177)
chr7 (18-227)||(44863593-44863798)
chr7 (18-227)||(142018-142223)
chr7 (66-251)||(10862405-10862590)
chr7 (18-227)||(47288126-47288331)
chr7 (66-253)||(11285642-11285829)
chr7 (66-194)||(13867635-13867761)
chr7 (18-143)||(26071861-26071981)
chr7 (18-143)||(26095648-26095768)
chr7 (16-143)||(3893535-3893664)
chr7 (66-143)||(9058230-9058310)
chr7 (17-143)||(45453850-45453970)
chr7 (66-194)||(12545351-12545478)
chr7 (17-143)||(12753321-12753450)
chr7 (66-178)||(11582498-11582608)
chr7 (66-182)||(13038768-13038882)
chr7 (97-141)||(20587210-20587254)
chr7 (18-143)||(15952681-15952801)
chr7 (97-143)||(4483268-4483314)
chr7 (20-139)||(112899-113020)
chr7 (97-142)||(8565177-8565222)
chr7 (97-142)||(28718977-28719022)
chr7 (40-143)||(369364-369463)
chr7 (98-142)||(9322663-9322707)
chr7 (163-227)||(18305370-18305434)
chr7 (18-53)||(2192615-2192650)
chr7 (18-53)||(7286337-7286372)
chr7 (18-53)||(7291057-7291092)
chr7 (18-53)||(14253080-14253115)
chr7 (18-53)||(15952868-15952903)
chr7 (66-143)||(1938364-1938439)
chr7 (18-52)||(12545563-12545597)
chr7 (66-143)||(32496143-32496218)
chr7 (98-143)||(13388489-13388534)
chr7 (18-54)||(12545615-12545651)
chr7 (18-54)||(13867894-13867930)
chr7 (66-182)||(36051090-36051206)
chr7 (18-53)||(2024814-2024849)
chr7 (18-53)||(16480845-16480880)
chr7 (97-143)||(21676631-21676678)
chr7 (98-143)||(13376196-13376241)
chr7 (102-143)||(15914030-15914071)
chr7 (158-234)||(12545274-12545348)
chr7 (64-143)||(16416968-16417045)
chr7 (68-182)||(16480547-16480660)
chr7 (64-143)||(18255409-18255486)
[»] chr1 (51 HSPs)
chr1 (24-253)||(35523969-35524196)
chr1 (18-253)||(51657873-51658107)
chr1 (18-227)||(22407808-22408012)
chr1 (18-253)||(21716587-21716820)
chr1 (66-251)||(20956517-20956702)
chr1 (30-251)||(49966045-49966263)
chr1 (66-251)||(22836801-22836986)
chr1 (69-251)||(27673283-27673465)
chr1 (18-223)||(2422651-2422851)
chr1 (66-182)||(9785858-9785972)
chr1 (16-143)||(35053278-35053407)
chr1 (66-182)||(20895349-20895463)
chr1 (30-143)||(5676199-5676314)
chr1 (163-253)||(22407744-22407832)
chr1 (66-143)||(37235559-37235639)
chr1 (100-183)||(18505814-18505896)
chr1 (97-142)||(5471983-5472028)
chr1 (86-143)||(21193678-21193735)
chr1 (97-142)||(22144991-22145036)
chr1 (97-142)||(41213266-41213311)
chr1 (40-143)||(41217919-41218018)
chr1 (99-142)||(5769813-5769856)
chr1 (18-143)||(15863017-15863137)
chr1 (66-143)||(20444237-20444312)
chr1 (66-143)||(37846064-37846139)
chr1 (79-120)||(8541308-8541349)
chr1 (79-120)||(8606547-8606588)
chr1 (97-142)||(20821476-20821521)
chr1 (18-54)||(20252491-20252527)
chr1 (18-54)||(41217695-41217731)
chr1 (97-143)||(77630-77677)
chr1 (18-53)||(15863230-15863265)
chr1 (68-182)||(22365181-22365293)
chr1 (107-182)||(41210509-41210584)
chr1 (66-143)||(20929970-20930045)
chr1 (66-143)||(22352625-22352700)
chr1 (66-143)||(44036491-44036566)
chr1 (18-58)||(5676346-5676386)
chr1 (66-121)||(20530001-20530054)
chr1 (66-182)||(21857978-21858094)
chr1 (64-143)||(22226478-22226555)
chr1 (64-143)||(35935164-35935241)
chr1 (18-53)||(22250785-22250820)
chr1 (98-141)||(38035221-38035264)
chr1 (98-140)||(36357938-36357980)
chr1 (98-143)||(13378359-13378404)
chr1 (98-143)||(19601704-19601749)
chr1 (64-143)||(17147277-17147354)
chr1 (18-50)||(20895526-20895558)
chr1 (18-50)||(41217823-41217855)
chr1 (43-143)||(45050164-45050260)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-253)||(145312-145546)
[»] chr2 (55 HSPs)
chr2 (18-250)||(22691497-22691727)
chr2 (18-250)||(22696144-22696374)
chr2 (17-249)||(31723-31954)
chr2 (17-250)||(7319867-7320099)
chr2 (66-249)||(24572940-24573125)
chr2 (17-253)||(28972422-28972656)
chr2 (66-253)||(22581478-22581663)
chr2 (66-253)||(4449773-4449959)
chr2 (66-253)||(269617-269803)
chr2 (66-251)||(720859-721043)
chr2 (18-219)||(36892282-36892478)
chr2 (18-216)||(25877543-25877736)
chr2 (66-140)||(24088972-24089046)
chr2 (66-143)||(19435066-19435143)
chr2 (16-143)||(6877887-6878009)
chr2 (66-143)||(25600452-25600527)
chr2 (86-143)||(43641336-43641393)
chr2 (18-143)||(22861934-22862054)
chr2 (18-143)||(43644559-43644679)
chr2 (97-143)||(19658470-19658516)
chr2 (97-142)||(22137424-22137469)
chr2 (18-143)||(12643608-12643728)
chr2 (97-142)||(18534350-18534395)
chr2 (97-142)||(24272579-24272624)
chr2 (18-54)||(25600357-25600393)
chr2 (18-143)||(8886587-8886707)
chr2 (18-53)||(12638003-12638038)
chr2 (18-53)||(21276351-21276386)
chr2 (165-251)||(22787583-22787669)
chr2 (66-143)||(22273384-22273459)
chr2 (66-143)||(22282617-22282692)
chr2 (98-143)||(4884-4929)
chr2 (98-143)||(23823116-23823161)
chr2 (98-143)||(23825060-23825105)
chr2 (98-143)||(23832195-23832240)
chr2 (98-143)||(24296180-24296225)
chr2 (98-143)||(25304090-25304135)
chr2 (66-121)||(461162-461215)
chr2 (163-218)||(721037-721093)
chr2 (21-53)||(3800978-3801010)
chr2 (66-121)||(9654511-9654564)
chr2 (64-143)||(12637747-12637824)
chr2 (40-143)||(15631864-15631963)
chr2 (64-143)||(21140374-21140451)
chr2 (64-143)||(21276109-21276186)
chr2 (18-54)||(24966571-24966607)
chr2 (18-54)||(42180217-42180253)
chr2 (18-53)||(12643821-12643856)
chr2 (18-53)||(25211136-25211171)
chr2 (43-143)||(24828143-24828239)
chr2 (43-143)||(24832595-24832691)
chr2 (64-143)||(19888360-19888437)
chr2 (66-121)||(20629038-20629091)
chr2 (18-54)||(20629150-20629186)
chr2 (66-121)||(24966713-24966766)
[»] chr8 (60 HSPs)
chr8 (18-234)||(28543320-28543534)
chr8 (17-253)||(17731007-17731239)
chr8 (17-253)||(20655566-20655793)
chr8 (65-250)||(38532076-38532262)
chr8 (66-249)||(21679632-21679814)
chr8 (66-226)||(25120939-25121097)
chr8 (66-226)||(19994716-19994875)
chr8 (66-207)||(18768355-18768497)
chr8 (66-207)||(22737469-22737609)
chr8 (66-186)||(16416737-16416855)
chr8 (66-186)||(20480093-20480211)
chr8 (66-194)||(22323049-22323174)
chr8 (66-182)||(24719036-24719150)
chr8 (66-143)||(25294491-25294568)
chr8 (66-143)||(25756480-25756557)
chr8 (16-182)||(24108204-24108365)
chr8 (66-143)||(37655243-37655323)
chr8 (66-143)||(41244128-41244203)
chr8 (185-253)||(20648981-20649049)
chr8 (18-136)||(37605432-37605552)
chr8 (18-143)||(16203921-16204041)
chr8 (95-142)||(22498901-22498948)
chr8 (66-182)||(22008098-22008212)
chr8 (97-142)||(33170785-33170830)
chr8 (66-142)||(23153407-23153485)
chr8 (66-143)||(270240-270315)
chr8 (66-143)||(645605-645680)
chr8 (66-143)||(831340-831415)
chr8 (97-142)||(24238065-24238110)
chr8 (97-142)||(33612659-33612704)
chr8 (98-142)||(23116418-23116462)
chr8 (18-54)||(41508935-41508971)
chr8 (68-182)||(13664255-13664367)
chr8 (18-53)||(13664559-13664594)
chr8 (68-182)||(13723530-13723642)
chr8 (18-53)||(13723834-13723869)
chr8 (18-53)||(22909351-22909386)
chr8 (18-53)||(23509217-23509252)
chr8 (18-53)||(24108474-24108509)
chr8 (66-143)||(24930700-24930775)
chr8 (98-143)||(21696082-21696127)
chr8 (97-142)||(22312190-22312235)
chr8 (43-143)||(24547703-24547799)
chr8 (98-143)||(39448419-39448464)
chr8 (97-142)||(45560816-45560861)
chr8 (21-53)||(3433390-3433422)
chr8 (18-54)||(18610577-18610613)
chr8 (18-54)||(22323233-22323269)
chr8 (70-182)||(22909103-22909215)
chr8 (64-143)||(23509416-23509493)
chr8 (66-121)||(43375206-43375259)
chr8 (18-53)||(28836223-28836258)
chr8 (66-143)||(29758792-29758867)
chr8 (98-143)||(21192343-21192388)
chr8 (18-54)||(16041385-16041421)
chr8 (18-54)||(16043061-16043097)
chr8 (99-143)||(21199770-21199814)
chr8 (66-121)||(24387314-24387367)
chr8 (18-54)||(24719331-24719367)
chr8 (107-143)||(31195881-31195917)
[»] chr5 (61 HSPs)
chr5 (17-253)||(23453332-23453567)
chr5 (17-253)||(23460576-23460811)
chr5 (17-253)||(23464837-23465072)
chr5 (24-253)||(24184756-24184983)
chr5 (66-251)||(3672422-3672607)
chr5 (66-250)||(19404011-19404194)
chr5 (24-253)||(11338408-11338634)
chr5 (30-253)||(21392592-21392808)
chr5 (66-198)||(5452375-5452510)
chr5 (66-194)||(21652999-21653125)
chr5 (66-194)||(28258021-28258146)
chr5 (18-182)||(11582296-11582455)
chr5 (18-143)||(21661316-21661443)
chr5 (18-182)||(1170280-1170439)
chr5 (67-182)||(24470732-24470845)
chr5 (66-143)||(21615502-21615582)
chr5 (66-143)||(24227065-24227145)
chr5 (20-143)||(27185426-27185551)
chr5 (66-143)||(19860723-19860803)
chr5 (16-143)||(4863706-4863835)
chr5 (66-182)||(17473509-17473625)
chr5 (18-143)||(22884885-22885005)
chr5 (18-182)||(23510370-23510530)
chr5 (40-143)||(10779881-10779980)
chr5 (18-54)||(34937720-34937756)
chr5 (18-53)||(10456-10491)
chr5 (18-53)||(10584-10619)
chr5 (18-53)||(1221647-1221682)
chr5 (18-53)||(9732601-9732636)
chr5 (18-53)||(17473710-17473745)
chr5 (18-53)||(19498085-19498120)
chr5 (18-53)||(43445717-43445752)
chr5 (97-143)||(11964472-11964518)
chr5 (66-143)||(35792832-35792907)
chr5 (67-143)||(110686-110760)
chr5 (98-143)||(13793655-13793700)
chr5 (97-138)||(20455700-20455741)
chr5 (98-143)||(23492528-23492573)
chr5 (21-53)||(11340895-11340927)
chr5 (64-143)||(19498299-19498376)
chr5 (64-143)||(22368186-22368263)
chr5 (16-114)||(25211623-25211716)
chr5 (16-114)||(25275775-25275868)
chr5 (18-54)||(28257926-28257962)
chr5 (18-53)||(110897-110932)
chr5 (18-53)||(10780121-10780156)
chr5 (18-53)||(22368346-22368381)
chr5 (18-53)||(22885050-22885085)
chr5 (18-53)||(29192576-29192611)
chr5 (66-182)||(18779732-18779847)
chr5 (98-143)||(7727103-7727148)
chr5 (102-143)||(32967770-32967811)
chr5 (98-143)||(37189726-37189771)
chr5 (64-143)||(10850-10927)
chr5 (64-143)||(9732368-9732445)
chr5 (18-58)||(19498212-19498252)
chr5 (18-54)||(25211798-25211834)
chr5 (18-54)||(25275950-25275986)
chr5 (64-143)||(25425121-25425198)
chr5 (64-143)||(29192319-29192396)
chr5 (64-143)||(43445459-43445536)
[»] scaffold0342 (2 HSPs)
scaffold0342 (24-254)||(4232-4460)
scaffold0342 (18-53)||(2474-2509)
[»] chr6 (57 HSPs)
chr6 (66-253)||(22866603-22866790)
chr6 (66-253)||(28196326-28196514)
chr6 (66-253)||(18397360-18397547)
chr6 (24-251)||(25368905-25369129)
chr6 (18-226)||(13016350-13016556)
chr6 (18-227)||(18422185-18422390)
chr6 (18-227)||(25646432-25646636)
chr6 (71-207)||(15738687-15738823)
chr6 (165-253)||(32897258-32897344)
chr6 (17-143)||(22428625-22428746)
chr6 (21-143)||(31626892-31627009)
chr6 (16-142)||(25745897-25746025)
chr6 (16-182)||(18825379-18825547)
chr6 (66-182)||(35017261-35017376)
chr6 (18-143)||(18775655-18775782)
chr6 (66-143)||(22846616-22846696)
chr6 (16-182)||(18843440-18843608)
chr6 (40-182)||(18004594-18004732)
chr6 (16-90)||(32896421-32896492)
chr6 (97-143)||(34965470-34965516)
chr6 (97-142)||(19852795-19852840)
chr6 (21-143)||(16105004-16105129)
chr6 (66-182)||(18740878-18740994)
chr6 (97-138)||(23220222-23220263)
chr6 (18-54)||(14628376-14628412)
chr6 (18-54)||(16238727-16238763)
chr6 (18-54)||(35011131-35011167)
chr6 (18-53)||(18578983-18579018)
chr6 (18-53)||(18843717-18843752)
chr6 (97-143)||(21930417-21930464)
chr6 (18-53)||(23975858-23975893)
chr6 (18-53)||(33316422-33316457)
chr6 (66-143)||(1659291-1659366)
chr6 (66-143)||(18128776-18128851)
chr6 (43-143)||(1651530-1651626)
chr6 (67-143)||(4989403-4989477)
chr6 (200-253)||(7828830-7828883)
chr6 (98-143)||(18383282-18383327)
chr6 (66-121)||(13622804-13622857)
chr6 (18-54)||(13622939-13622975)
chr6 (68-143)||(14628193-14628266)
chr6 (64-143)||(23976072-23976149)
chr6 (64-143)||(33316164-33316241)
chr6 (18-54)||(35017459-35017495)
chr6 (18-53)||(4989231-4989266)
chr6 (18-53)||(18004866-18004901)
chr6 (18-53)||(19627647-19627682)
chr6 (18-53)||(25173761-25173796)
chr6 (96-142)||(16134804-16134849)
chr6 (66-119)||(16238869-16238920)
chr6 (66-143)||(19984788-19984863)
chr6 (67-143)||(16827460-16827534)
chr6 (158-227)||(25646392-25646461)
chr6 (98-143)||(33323338-33323383)
chr6 (18-54)||(18128488-18128524)
chr6 (64-143)||(25174059-25174136)
chr6 (64-143)||(27655668-27655745)
[»] scaffold0008 (5 HSPs)
scaffold0008 (18-227)||(21010-21214)
scaffold0008 (18-227)||(28600-28804)
scaffold0008 (163-253)||(21190-21278)
scaffold0008 (163-253)||(28780-28867)
scaffold0008 (66-121)||(129808-129861)
[»] scaffold0808 (1 HSPs)
scaffold0808 (66-253)||(3012-3199)
[»] scaffold0589 (1 HSPs)
scaffold0589 (17-253)||(6264-6499)
[»] scaffold0103 (1 HSPs)
scaffold0103 (18-253)||(31973-32200)
[»] scaffold0031 (2 HSPs)
scaffold0031 (66-253)||(30508-30695)
scaffold0031 (28-143)||(68783-68895)
[»] scaffold0001 (2 HSPs)
scaffold0001 (68-253)||(71996-72177)
scaffold0001 (16-58)||(75546-75588)
[»] scaffold0092 (1 HSPs)
scaffold0092 (19-253)||(1802-2035)
[»] scaffold0021 (4 HSPs)
scaffold0021 (17-249)||(10047-10277)
scaffold0021 (19-219)||(76736-76931)
scaffold0021 (18-143)||(138404-138524)
scaffold0021 (158-227)||(76910-76979)
[»] scaffold0022 (5 HSPs)
scaffold0022 (66-207)||(108081-108223)
scaffold0022 (28-132)||(113891-113992)
scaffold0022 (97-142)||(130409-130454)
scaffold0022 (98-143)||(106518-106563)
scaffold0022 (64-143)||(6734-6811)
[»] scaffold0011 (5 HSPs)
scaffold0011 (18-227)||(256474-256678)
scaffold0011 (66-182)||(124952-125066)
scaffold0011 (66-182)||(193000-193114)
scaffold0011 (66-121)||(72032-72085)
scaffold0011 (66-121)||(76413-76466)
[»] scaffold0359 (2 HSPs)
scaffold0359 (68-227)||(13347-13505)
scaffold0359 (18-54)||(13556-13592)
[»] scaffold0338 (2 HSPs)
scaffold0338 (66-227)||(7225-7386)
scaffold0338 (17-54)||(7130-7167)
[»] scaffold0037 (3 HSPs)
scaffold0037 (19-251)||(26308-26533)
scaffold0037 (158-227)||(26290-26359)
scaffold0037 (17-135)||(66322-66442)
[»] scaffold0750 (1 HSPs)
scaffold0750 (17-181)||(2799-2959)
[»] scaffold0124 (2 HSPs)
scaffold0124 (17-181)||(26502-26662)
scaffold0124 (177-253)||(23243-23320)
[»] scaffold0190 (1 HSPs)
scaffold0190 (24-143)||(8530-8646)
[»] scaffold0692 (1 HSPs)
scaffold0692 (18-186)||(1001-1164)
[»] scaffold0480 (1 HSPs)
scaffold0480 (66-223)||(6931-7086)
[»] scaffold0292 (2 HSPs)
scaffold0292 (66-179)||(18078-18189)
scaffold0292 (18-54)||(17885-17921)
[»] scaffold0171 (1 HSPs)
scaffold0171 (18-178)||(31186-31341)
[»] scaffold0243 (1 HSPs)
scaffold0243 (66-143)||(3893-3970)
[»] scaffold0521 (1 HSPs)
scaffold0521 (69-196)||(7072-7199)
[»] scaffold0116 (2 HSPs)
scaffold0116 (18-182)||(28209-28368)
scaffold0116 (18-54)||(28101-28137)
[»] scaffold0269 (4 HSPs)
scaffold0269 (66-182)||(3445-3559)
scaffold0269 (66-143)||(578-653)
scaffold0269 (18-54)||(3205-3241)
scaffold0269 (18-53)||(433-468)
[»] scaffold0049 (2 HSPs)
scaffold0049 (66-182)||(31017-31131)
scaffold0049 (18-54)||(30800-30836)
[»] scaffold0622 (3 HSPs)
scaffold0622 (21-143)||(7875-8000)
scaffold0622 (18-54)||(7587-7623)
scaffold0622 (18-50)||(7715-7747)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-143)||(60013-60142)
[»] scaffold0150 (2 HSPs)
scaffold0150 (109-198)||(20172-20261)
scaffold0150 (109-198)||(27001-27090)
[»] scaffold0395 (1 HSPs)
scaffold0395 (41-140)||(14147-14243)
[»] scaffold2147 (1 HSPs)
scaffold2147 (18-182)||(684-843)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-143)||(236621-236749)
scaffold0009 (18-143)||(270574-270695)
[»] scaffold0016 (2 HSPs)
scaffold0016 (66-154)||(163828-163914)
scaffold0016 (98-143)||(118203-118248)
[»] scaffold0673 (2 HSPs)
scaffold0673 (18-148)||(3700-3825)
scaffold0673 (144-253)||(2383-2491)
[»] scaffold0028 (4 HSPs)
scaffold0028 (18-182)||(90559-90718)
scaffold0028 (64-143)||(128886-128963)
scaffold0028 (18-53)||(90811-90846)
scaffold0028 (18-53)||(128760-128795)
[»] scaffold0240 (1 HSPs)
scaffold0240 (18-143)||(5994-6114)
[»] scaffold0120 (1 HSPs)
scaffold0120 (41-143)||(27043-27142)
[»] scaffold0193 (1 HSPs)
scaffold0193 (66-143)||(3245-3325)
[»] scaffold0407 (2 HSPs)
scaffold0407 (66-182)||(6269-6383)
scaffold0407 (18-50)||(6422-6454)
[»] scaffold0090 (1 HSPs)
scaffold0090 (140-251)||(6194-6305)
[»] scaffold0080 (1 HSPs)
scaffold0080 (79-143)||(25210-25274)
[»] scaffold0039 (3 HSPs)
scaffold0039 (67-182)||(20865-20978)
scaffold0039 (18-54)||(21038-21074)
scaffold0039 (18-54)||(21166-21202)
[»] scaffold0102 (1 HSPs)
scaffold0102 (18-143)||(37910-38030)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-139)||(249140-249256)
[»] scaffold0106 (1 HSPs)
scaffold0106 (66-182)||(40025-40139)
[»] scaffold0083 (1 HSPs)
scaffold0083 (16-143)||(12644-12766)
[»] scaffold0138 (2 HSPs)
scaffold0138 (66-152)||(14995-15079)
scaffold0138 (18-54)||(26599-26635)
[»] scaffold0396 (3 HSPs)
scaffold0396 (66-143)||(13788-13863)
scaffold0396 (19-54)||(13922-13957)
scaffold0396 (64-143)||(15941-16018)
[»] scaffold0051 (1 HSPs)
scaffold0051 (16-141)||(56378-56505)
[»] scaffold0462 (1 HSPs)
scaffold0462 (21-143)||(4572-4697)
[»] scaffold0195 (6 HSPs)
scaffold0195 (18-141)||(19830-19955)
scaffold0195 (18-53)||(17672-17707)
scaffold0195 (18-53)||(19702-19737)
scaffold0195 (40-141)||(17768-17871)
scaffold0195 (102-143)||(8248-8289)
scaffold0195 (102-143)||(13637-13678)
[»] scaffold0184 (3 HSPs)
scaffold0184 (16-182)||(33728-33891)
scaffold0184 (66-143)||(32778-32853)
scaffold0184 (18-53)||(33536-33571)
[»] scaffold0078 (3 HSPs)
scaffold0078 (16-182)||(38953-39116)
scaffold0078 (66-143)||(39991-40066)
scaffold0078 (18-53)||(39273-39308)
[»] scaffold0434 (2 HSPs)
scaffold0434 (66-143)||(3152-3227)
scaffold0434 (18-54)||(3057-3093)
[»] scaffold0786 (2 HSPs)
scaffold0786 (97-142)||(211-256)
scaffold0786 (97-142)||(5266-5311)
[»] scaffold0390 (1 HSPs)
scaffold0390 (97-142)||(3799-3844)
[»] scaffold0004 (3 HSPs)
scaffold0004 (97-142)||(84942-84987)
scaffold0004 (97-142)||(26080-26125)
scaffold0004 (66-143)||(197687-197762)
[»] scaffold0032 (3 HSPs)
scaffold0032 (18-143)||(109667-109787)
scaffold0032 (18-53)||(109906-109941)
scaffold0032 (66-141)||(54140-54213)
[»] scaffold0447 (5 HSPs)
scaffold0447 (66-143)||(3118-3193)
scaffold0447 (18-54)||(2767-2803)
scaffold0447 (18-54)||(2895-2931)
scaffold0447 (18-54)||(2639-2675)
scaffold0447 (18-50)||(3023-3055)
[»] scaffold0383 (5 HSPs)
scaffold0383 (66-143)||(5726-5801)
scaffold0383 (18-53)||(671-706)
scaffold0383 (18-143)||(825-945)
scaffold0383 (18-54)||(5503-5539)
scaffold0383 (18-50)||(5631-5663)
[»] scaffold0044 (3 HSPs)
scaffold0044 (158-227)||(94807-94876)
scaffold0044 (144-251)||(94753-94858)
scaffold0044 (18-54)||(94453-94489)
[»] scaffold0597 (1 HSPs)
scaffold0597 (31-143)||(2717-2827)
[»] scaffold1140 (1 HSPs)
scaffold1140 (66-152)||(1530-1614)
[»] scaffold0023 (2 HSPs)
scaffold0023 (18-53)||(156192-156227)
scaffold0023 (64-143)||(155935-156012)
[»] scaffold0266 (2 HSPs)
scaffold0266 (66-143)||(12786-12861)
scaffold0266 (66-143)||(5184-5259)
[»] scaffold0077 (1 HSPs)
scaffold0077 (19-53)||(21642-21676)
[»] scaffold0025 (4 HSPs)
scaffold0025 (66-143)||(145031-145106)
scaffold0025 (66-143)||(147290-147365)
scaffold0025 (18-54)||(144936-144972)
scaffold0025 (18-54)||(147195-147231)
[»] scaffold0003 (3 HSPs)
scaffold0003 (66-143)||(217335-217410)
scaffold0003 (97-135)||(99651-99689)
scaffold0003 (64-143)||(5680-5757)
[»] scaffold0507 (1 HSPs)
scaffold0507 (98-143)||(4950-4995)
[»] scaffold0346 (3 HSPs)
scaffold0346 (17-54)||(15943-15980)
scaffold0346 (66-119)||(15833-15884)
scaffold0346 (97-138)||(14215-14256)
[»] scaffold0095 (1 HSPs)
scaffold0095 (98-143)||(7262-7307)
[»] scaffold1560 (1 HSPs)
scaffold1560 (64-143)||(1371-1448)
[»] scaffold0302 (1 HSPs)
scaffold0302 (64-143)||(4339-4416)
[»] scaffold0191 (1 HSPs)
scaffold0191 (18-54)||(501-537)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-54)||(77749-77785)
[»] scaffold0483 (1 HSPs)
scaffold0483 (18-53)||(4647-4682)
[»] scaffold0335 (1 HSPs)
scaffold0335 (18-53)||(9939-9974)
[»] scaffold0315 (2 HSPs)
scaffold0315 (18-53)||(16917-16952)
scaffold0315 (70-182)||(17075-17187)
[»] scaffold0253 (1 HSPs)
scaffold0253 (18-53)||(14997-15032)
[»] scaffold0234 (1 HSPs)
scaffold0234 (68-118)||(19255-19303)
[»] scaffold0125 (1 HSPs)
scaffold0125 (18-53)||(29786-29821)
[»] scaffold0109 (1 HSPs)
scaffold0109 (18-53)||(49487-49522)
[»] scaffold0467 (1 HSPs)
scaffold0467 (66-143)||(11617-11692)
[»] scaffold0601 (1 HSPs)
scaffold0601 (99-143)||(2576-2621)
[»] scaffold0384 (1 HSPs)
scaffold0384 (64-140)||(1-75)
[»] scaffold0130 (1 HSPs)
scaffold0130 (18-47)||(31363-31392)
[»] scaffold0450 (1 HSPs)
scaffold0450 (18-54)||(4529-4565)
[»] scaffold0413 (1 HSPs)
scaffold0413 (64-143)||(9511-9588)
[»] scaffold0218 (1 HSPs)
scaffold0218 (66-121)||(6830-6883)
[»] scaffold0026 (1 HSPs)
scaffold0026 (64-143)||(106498-106575)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 45460743 - 45460499
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaa-tcaccaat------tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatat 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45460743 acatcaattcacagttattcatacacaatcaccaaatcaccaatcacagttctcaacataagactcatgtcatgatgtgcacctagttcgacacgtatat 45460644  T
Q  109 gcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctcta 208  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  45460643 gcatgcggtaccatatcacctcaaggtcgtcacctatatccagactgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctg 45460544  T
Q  209 caagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||    
T  45460543 caagactgaagtccacaaaactagatcactcaatgatctctgcta 45460499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 21 - 253
Target Start/End: Complemental strand, 30236266 - 30236035
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacc 120  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  30236266 aattcacagttattcatacacagtcaccaatcac-aattctcaacataagactcatgtcatgatgtgcacctaatttgacacatatatggatgtggtacc 30236168  T
Q  121 atatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  30236167 atatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctacaaggccgaagcccacaatctagatcactatagatctctgcaagaccgaagt 30236068  T
Q  221 ccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||| | ||||||||||||||||    
T  30236067 ccacaaaactagatcagtcaatgatctctgcta 30236035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 13811362 - 13811174
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||    
T  13811362 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccgccaaaggtct 13811263  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||    
T  13811262 ctgcaataccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctatgcta 13811174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 71 - 253
Target Start/End: Complemental strand, 18496134 - 18495952
Alignment:
Q  71 actcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgca 170  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  18496134 actcatgtcatgatgtgcacctagtt-gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccgtcaaaggtctctgca 18496036  T
Q  171 aggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  18496035 aggccgaagcccacaatctagattactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 18495952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 44054307 - 44054537
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||||||||||||||||||||||||||||||||||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| |||||||||    
T  44054307 acatcaattcacagttattcatacacaatcaccaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 44054401  T
Q  116 gtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagacc 215  Q
    |||||  |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  44054402 gtaccggatcacctcaaggccgtcacctatatctagaccgtcaaaggtctctgcaaggccgaagcccataatctagatcactatggatctctgcaagacc 44054501  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||  ||||||||| || |||||||||||||||    
T  44054502 gaagtcca-gaaactagatcac-caatgatctctgcta 44054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 43283118 - 43282986
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||  |||||||||    
T  43283118 ataagactcatgtcatgatatgcacctagttcgacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacctatatctagaccaccaaaggtct 43283019  T
Q  166 ctgcaaggccgaagcccacaatctagatcacta 198  Q
    ||||||||||||||| || ||||||||||||||    
T  43283018 ctgcaaggccgaagctcataatctagatcacta 43282986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 33738613 - 33738818
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||| |||||||||||||||||||||||||  || | ||||  |||||||||||||||||| ||||  ||  |||||||||||||||||||||    
T  33738613 atcaattcacaattattcatacacaatcaccaatcac--atacatcaa--taagactcatgtcatgatatgcatgta--tcgacacatatatgcatgtgg 33738706  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagacc 215  Q
    ||||| ||||||| |||||||||||  |||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||     
T  33738707 taccaaatcaccttaaggtcgtcactcatatccagaccaccaagggtctctgcaaggcctgaagcccaaaatctagatcactaaggatctctgcaagact 33738806  T
Q  216 gaagtccacaaa 227  Q
    ||||||||||||    
T  33738807 gaagtccacaaa 33738818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 52267196 - 52267059
Alignment:
Q  70 gactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgc 169  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||| || |||||||||||    
T  52267196 gactcatgtcatgatatgcacctagttcgacacatacatgcatgtggtaccaaatcacttcaaggtcgtcacctatatctagaccatc-aaggtctctgc 52267098  T
Q  170 aaggccgaagcccacaatctagatcact-atggatctct 207  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  52267097 aaggccgaagcccacaatctagatcactaatggatctct 52267059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 15043381 - 15043553
Alignment:
Q  79 catgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaa 178  Q
    |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  ||| |||||  ||||||||||| ||||||||||    
T  15043381 catgatatgcacctagttcgacacatatatgcatgtggtaccaaatgacctcaaggtcgtcaccttcatctagaccaccaaaggtctctacaaggccgaa 15043480  T
Q  179 gcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
     |||||||||||||||||| |||||||||| |||| |||||| |||  ||||||||| ||| ||||||| ||||    
T  15043481 acccacaatctagatcactaatggatctctgcaaggccgaagccca-taaactagatcactaaatgatccctgc 15043553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 15111043 - 15110871
Alignment:
Q  79 catgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaa 178  Q
    |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  ||| |||||  ||||||||||| ||||||||||    
T  15111043 catgatatgcacctagttcgacacatatatgcatgtggtaccaaatgacctcaaggtcgtcaccttcatctagaccaccaaaggtctctacaaggccgaa 15110944  T
Q  179 gcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
     |||||||||||||||||| |||||||||| |||| |||||| |||  ||||||||| ||| ||||||| ||||    
T  15110943 acccacaatctagatcactaatggatctctgcaaggccgaagccca-taaactagatcactaaatgatccctgc 15110871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 16395776 - 16395671
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||| | |||||||||||| |    
T  16395776 ataagactcatg-catgatgtgtacctagaccgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctaaaccgtcaaaggttt 16395678  T
Q  166 ctgcaag 172  Q
    |||||||    
T  16395677 ctgcaag 16395671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 44345260 - 44345378
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  ||||||||||||||||||||| || |||||||||||||||||||||  |||||||||  ||| |||||    
T  44345260 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaacaaatcacctcaaggtcgtcacctgaatccagaccaccaagggtct 44345357  T
Q  166 ctgcaaggccgaagcccacaa 186  Q
    ||||||| |||||| ||||||    
T  44345358 ctgcaagaccgaagtccacaa 44345378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 12838042 - 12837920
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  |||| |  |||||||||||||||| ||||||||  |||||||||| |||||||||||    
T  12838042 atcaattcacaattattcatacacaatcaccaatcacatata-tcaaaa--agactcatgtcatgatatgcacctatatcgacacatacatgcatgtggt 12837946  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||||| |||||||||||||||    
T  12837945 accaaatcacatcaaggtcgtcacct 12837920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 14899970 - 14900047
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  14899970 ataagactcatgtcatgatatgcacgtagttcgacacatatatgcatgtgataccaaatcacctcaaggtcgtcacct 14900047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 53909504 - 53909390
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |   |||| |||    
T  53909504 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatcacctcagggtcgtcacccatatccagatctcaaaagatct 53909407  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  53909406 ctgccaggccgaagccc 53909390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 16366479 - 16366320
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||| ||||||  ||  ||||  |||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  16366479 atcaattcacaaatattcattcacaatcactaatcacatata-tcaa--taagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggt 16366385  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccca 183  Q
    |||| ||| |||||||||||||||| ||||||||| |  ||| | ||||||| |||||||||||||    
T  16366384 accaaatctcctcaaggtcgtcacccatatccagatc-ccaaggatctctgctaggccgaagccca 16366320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 12901491 - 12901365
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatg 113  Q
    |||||||||||||||||| ||||||||||||||||||||||    | |||| | ||||||||||||||||| | ||| || |  |||||||| |||||||    
T  12901491 atcaattcacagttattcgtacacaatcaccaatcaccaatcacatttcaa-agaagactcatgtcatgatatacacttatt--gacacataaatgcatg 12901395  T
Q  114 tggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||  |||||||||||||||||||||    
T  12901394 tggtaccggatcacctcaaggtcgtcacct 12901365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 41258030 - 41257951
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||||||   |||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  41258030 ataagactcatgtcaacatgatatgcacctagtccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 41257951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 20813740 - 20813647
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat------tctcaacataagactcatgtcatgatgtgcacctagttcgacacata 105  Q
    ||||||||| |||||||||||||||| ||||| ||||||||      ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  20813740 atcaattcatagttattcatacacaaacaccattcaccaatcacaattctcaacataagactcatgtcatgatgtgcacctatttcaacacata 20813647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 21961286 - 21961161
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaa-----ttctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||||| ||||||||||||||||||||||||||| ||     ||  ||| | ||||||||||||||||| ||||| || |  |||||||| |||||||||    
T  21961286 aattcatagttattcatacacaatcaccaatcactaaacacatttccaaaacaagactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 21961189  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||  |||||||||||||||||||||    
T  21961188 gtaccggatcacctcaaggtcgtcacct 21961161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10239081 - 10239037
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcac 141  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  10239081 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcac 10239037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 13244743 - 13244872
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||||  ||  ||||  ||||||||||| |||||| | |||||| |  |||||||||||||||||||     
T  13244743 atcaattcacaaatattcattcacaatcaccaatcacatata-tcaa--taagactcatgccatgatatccacctatt--gacacatatatgcatgtggg 13244837  T
Q  118 accatatcacctcaaggtcgtcacctatatccaga 152  Q
    |||| ||||  ||| |||||||||| |||||||||    
T  13244838 accaaatcatttcagggtcgtcacccatatccaga 13244872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 53706510 - 53706454
Alignment:
Q  96 tcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccaga 152  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||    
T  53706510 tcgacacatatatgcatgtggtactagatcacctcagggtcgtcacccatatccaga 53706454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 10642612 - 10642724
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||| | ||||||| |   |||| |||||    
T  10642612 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacccaaatccagatctcaaaagatctct 10642709  T
Q  168 gcaaggccgaagccc 182  Q
    || ||||||||||||    
T  10642710 gccaggccgaagccc 10642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 8874161 - 8874086
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||| ||| ||||||||||||||  |||||||||||||||||||||    
T  8874161 ataagactcatgtcatgatatgcacttatt--gacaaataaatgcatgtggtaccggatcacctcaaggtcgtcacct 8874086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 5372342 - 5372297
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  5372342 cgacacatatatgcatgtggtaccaaatcacctcaagatcgtcacc 5372297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 9293950 - 9294032
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccaga 152  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||| |||||||||    
T  9293950 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacccatatccaga 9294032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 22356276 - 22356147
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcacca-----attctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgc 110  Q
    ||||||||||||| ||||||| ||| |||||||||||||||     ||| |||| ||| ||||||||||||||| ||||| ||  | |||| ||| ||||    
T  22356276 acatcaattcacaattattcacacataatcaccaatcaccaatcacattttcaa-atatgactcatgtcatgatatgcactta--ttgacaaataaatgc 22356180  T
Q  111 atgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||| ||| |  ||||||||||||||    
T  22356179 atgtggtaccaaatctcaacaaggtcgtcacct 22356147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 53909599 - 53909563
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  53909599 atcaattcacagttattcatacacaatcaccaatcac 53909563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 8372756 - 8372791
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  8372756 atcaattcacagttattcatacacaatcaccaatca 8372791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 26678326 - 26678361
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  26678326 atcaattcacagttattcatacacaatcaccaatca 26678361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 12245899 - 12245854
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  12245899 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 12245854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 14994678 - 14994774
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  14994678 atcaccaatcacaaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacc 14994773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 15852963 - 15852918
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  15852963 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 15852918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 17377084 - 17377039
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||    
T  17377084 cgacacatatatgaatgtggtaccaaatcacctcaaggtcatcacc 17377039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 50223806 - 50223761
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||    
T  50223806 cgacacatatatgcatgtgataccaaatcacctcaaggtcatcacc 50223761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 15274442 - 15274343
Alignment:
Q  40 acaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  |||||| |||    
T  15274442 acaatcaccaatcacaaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggttgtc 15274347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 19699457 - 19699421
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19699457 atcaattcacagctattcatacacaatcaccaatcac 19699421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 19710042 - 19710006
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19710042 atcaattcacagctattcatacacaatcaccaatcac 19710006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 19999024 - 19999101
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  19999024 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 19999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 34393536 - 34393572
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||| ||||||||    
T  34393536 atcaattcacagttattcatacacaatcgccaatcac 34393572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 7134354 - 7134319
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7134354 atcaattcacaattattcatacacaatcaccaatca 7134319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 18167023 - 18167058
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18167023 atcaattcacaattattcatacacaatcaccaatca 18167058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 22356468 - 22356433
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  22356468 atcaattcacagttattcatacacgatcaccaatca 22356433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 53706591 - 53706515
Alignment:
Q  30 ttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    ||||||| ||||||||||||| || ||| | |||  ||||||||||||||||||| ||||||||  ||||||||||||||||    
T  53706591 ttattcacacacaatcaccaaaca-caaatatca--ataagactcatgtcatgatatgcaccta--tcgacacatatatgca 53706515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 109981 - 110056
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  109981 ataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 110056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 5684561 - 5684487
Alignment:
Q  67 taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||||| ||||| || |  |||||||| ||||||||| ||||| ||| |  ||||||||||||||    
T  5684561 taagactcatgtcatgatatgcacttatt--gacacataaatgcatgtgataccaaatctcaacaaggtcgtcacct 5684487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 7848856 - 7848902
Alignment:
Q  73 tcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||    
T  7848856 tcatgtcatgatatgcacctatt--gacacatatatgcatgtggtacca 7848902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 34197808 - 34197767
Alignment:
Q  102 catatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  34197808 cataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 34197767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 47469977 - 47469936
Alignment:
Q  101 acatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  47469977 acatatatgcatgtggtaccaaataaccccaaggtcgtcacc 47469936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 54119963 - 54119849
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||| |||||||| ||| ||  |  ||||||||| | ||||||| |   |||| |||    
T  54119963 ataagactcatgccatgatatgcacctatt--gacacatatatgcatctggtaccaaatctccaaagagtcgtcacccaaatccagatctcaaaagatct 54119866  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||  ||||||||||||    
T  54119865 ctgtcaggccgaagccc 54119849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 15138219 - 15138142
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||| ||||||    
T  15138219 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcatcacct 15138142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 16521044 - 16521080
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  16521044 catcaattaacaattattcatacacaatcaccaatca 16521080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 18246687 - 18246764
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  18246687 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 18246764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19998937 - 19998977
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat 58  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  19998937 atcaattcacaaatattcattcacaatcaccaatcaccaat 19998977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 27959563 - 27959599
Alignment:
Q  107 atgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  |||||||||||||||||||||    
T  27959563 atgcatgtggtaccgaatcacctcaaggtcgtcacct 27959599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 47355822 - 47355899
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| || || || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  47355822 acataagactcatgttatgatatgaacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 47355899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 14287475 - 14287709
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||||||||| |||||||||||||  ||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14287475 catcaattcacagttattcatacaaaatcaccaatcac--att-tcaaaataagactcatgtcatgatgtgtacctagttcgacacatatatgcatgtgg 14287571  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  14287572 taccatttcacttcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggacgaagcccacaatctagatcactaatggatctctgcaagacc 14287671  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| |||||||| |||||    
T  14287672 gaagtccacaaaactagatcactaaatgatctatgcta 14287709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 11062812 - 11062579
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11062812 catcaattcacagttattcatacacaatcaccaatcac--att-tcaaaataagactcatgtcctgatgtgcacctagttcgacacatatatgcatgtgg 11062716  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||| | |||| |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  11062715 taccgtttcacttcaaggtcgtcacctatatctagaccatc-aaggtctctgcaaggccgaagcccacaatctagatcactaatggatttctgcaagacc 11062617  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  11062616 gaagtccacaaaactagatcactaaatgatctctgcta 11062579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 35122075 - 35122302
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    ||||||||||||||||||||||||||||||| | |   ||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||     
T  35122075 tcacagttattcatacacaatcaccaatcacgatt---caaaacaagactcatgtcataatgtgcacctagtccgacacatatatgcatgtggtaccatt 35122171  T
Q  124 tcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtcc 222  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  35122172 tcacttcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggtcggagcccacaaatctagatcactaaggatctctgcaagaccgaagtcc 35122271  T
Q  223 acaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||| ||| ||||||||||||||    
T  35122272 acaaaactagatcactaaatgatctctgcta 35122302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 12563258 - 12563023
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||| |||| |||||||| ||||||| | ||| | | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12563258 catcaaatcacatttaatcatgcacaatcatcaatcac-atttcacca-ataagactcatgccatgatgtgcacctagttcgacacatatatgcatgtgg 12563161  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  12563160 taccatttcacttcaaggtcgtcacctatatctagatcgtcaaaggtctctgcaaggccgaagcctacaatctagatctctaatggatctctacaagacc 12563061  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  12563060 gaagtccacaaaactagatcactaaatgatctctgcta 12563023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 40938160 - 40938347
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||||||||    
T  40938160 ataagactcatg-catgatgtgcacctagctcgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacttatatctagaccgtcaaaggtct 40938258  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||    
T  40938259 ctgcaaggccgaagcccacaatctagatcactaatggatctctgaaagaccgaagtccacaaaactagatcactaaatgatctctgcta 40938347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 14291897 - 14292068
Alignment:
Q  83 atgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14291897 atgtgcacctagttcgacgcatatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggccgaagccc 14291996  T
Q  183 acaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  14291997 acaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 14292068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 31 - 253
Target Start/End: Complemental strand, 53900284 - 53900064
Alignment:
Q  31 tattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctc 130  Q
    ||||||| |||||| ||||||||| ||||| | | |||||||||||| ||||||||  ||||||  |||| ||||||||||||||||||||| |||| ||    
T  53900284 tattcatgcacaattaccaatcac-aattcacca-ataagactcatg-catgatgtatacctagaccgacgcatatatgcatgtggtaccatttcacttc 53900188  T
Q  131 aaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtccacaaaac 229  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  53900187 aaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggccggagcccacaaatctagatcactaaggatctctgcaagaccgaagtccacaaaac 53900088  T
Q  230 tagattactcaatgatctctgcta 253  Q
    ||||| ||| ||||||||||||||    
T  53900087 tagatcactaaatgatctctgcta 53900064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 14523080 - 14522895
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||| ||| |||||||||  |||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14523080 ataagacttatg-catgatgtgttcctagcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacctatatctagaccgtcaaaggtct 14522982  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| |  |||||||||    
T  14522981 ctgcaaggccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaatggatctctgc 14522895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 14296926 - 14297113
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14296926 ataagactcatg-catgatgtgtacctagaccgacacgtatatgcatgtggtaccatatcacctcaaggtcgtcacctatatctagaccgtcaaaggtct 14297024  T
Q  166 ctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||| ||||||| ||||||| |||||| |||||||| |||| |||||||||||||| |||||| ||| ||||||||||||||    
T  14297025 ctgcaaggccggagcccacaaatctagttcactaaggatctctgcaaggccgaagtccacaaatctagatgactaaatgatctctgcta 14297113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 14302553 - 14302740
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14302553 ataagactcatg-catgatgtgtacctagaccgacacgtatatgcatgtggtaccatatcacctcaaggtcgtcacctatatctagaccgtcaaaggtct 14302651  T
Q  166 ctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||| ||||||| ||||||| |||||| |||||||| |||| |||||||||||||| |||||| ||| ||||||||||||||    
T  14302652 ctgcaaggccggagcccacaaatctagttcactaaggatctctgcaaggccgaagtccacaaatctagatgactaaatgatctctgcta 14302740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 6148573 - 6148348
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  |||||| |||||||||||||||||  ||   |||  |||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  6148573 atcaattcacaagtattcacacacaatcaccaatcacatat---caa--taagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggt 6148481  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| |||||||||||||||||||| | |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6148480 accaaatcacctcaaggtcgtcaccca-atccagaccaccaagggtctctgcaaggccgaagcccacaatctagatcactatggatctctgcaagaccga 6148382  T
Q  218 agtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||| ||||||||| || |||||||||||||||    
T  6148381 agtccac-aaactagatcac-caatgatctctgcta 6148348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 17099063 - 17099267
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| ||||||| |||||||||||||||||  ||  ||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  17099063 atcaattcacaattattcacacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggt 17099157  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| ||| ||||||||| |||||| ||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17099158 accaaatctcctcaaggttgtcacccatatctagaccaccaagggtctctgcaaggccgaagcccacaatctagatcactatggatctctgcaagaccga 17099257  T
Q  218 agtccacaaa 227  Q
    ||| ||||||    
T  17099258 agttcacaaa 17099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 17137895 - 17138079
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||| ||||||||||    
T  17137895 ataacactcatgtcatgatgtgcacctaattc-acacatatatgcatgtggtaccatttcacttcaaggttgtcacctatatctagaccatcaaaggtct 17137993  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    ||||||||||| ||||||| |||||||||||| | |||||||| |||||||||||||||| ||||||||| ||| ||||||||||||    
T  17137994 ctgcaaggccggagcccaccatctagatcactaacggatctctgcaagaccgaagtccac-aaactagatcactaaatgatctctgc 17138079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 17536680 - 17536533
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  17536680 ataagactcatg-catgatgtgtacctagaccgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatctagactgtcaaaggtct 17536582  T
Q  166 ctgcaaggccgaagcccacaa-tctagatcactatggatctctacaaga 213  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  17536581 ctgcaaggccgaagcccacaagtctagatcactaaggatctctacaaga 17536533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 12951477 - 12951665
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaagg 162  Q
    |||||||||||||||   |||| ||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||  ||||||    
T  12951477 ataagactcatgtcaacatgatatgcacgtagttcgacacatatatgcatgtggtaccgaatcacttcaaggtcgtcacctatatctagaccaccaaagg 12951576  T
Q  163 tctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||  ||| || ||| |||| ||||||||| ||| ||||||||||||    
T  12951577 tctctgcaaggccgaagcccacaatctatatcactaatggatctctcaaaggccaaagcccac-aaactagataactaaatgatctctgc 12951665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 86 - 251
Target Start/End: Complemental strand, 11883978 - 11883813
Alignment:
Q  86 tgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccaca 185  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||||||||||||||||||||||||||| |    
T  11883978 tgcacctagttcgacacatatatgcatgtggtaccaaatcacttcaaagtcgtcacctatatctagaccaccaaaggtctctgcaaggccgaagcccaaa 11883879  T
Q  186 atctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||| |||||||||| ||||  | ||| |||| ||||||||| ||| ||||||||||||    
T  11883878 atctagatcactaatggatctctgcaaggacaaagcccac-aaactagatcactaaatgatctctgc 11883813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 16183738 - 16183579
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||  ||| | |||    
T  16183738 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcaaagtcgtcacccatatccagaccaccaaggatct 16183641  T
Q  166 ctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagaccgaagtccacaa 226  Q
    |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||| ||||    
T  16183640 ctgcaaggcctgaagcccaaaatctagatcactaaggatctctgcaagaccgaagtctacaa 16183579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 47786587 - 47786463
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||||||||||||||||||||||| | ||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47786587 catcaattcacagttattcatacacaatcaccaatcac-atttcacca-ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgt 47786490  T
Q  117 taccatatcacctcaaggtcgtcacct 143  Q
    ||| |||||||||||||||||||||||    
T  47786489 tactatatcacctcaaggtcgtcacct 47786463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 15516126 - 15516307
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||||||||    |||||||||||||||| | ||||| |||||||||||||||||||| |||||  |||||||||    
T  15516126 ataagactcatgtcatgatatgcacctagttcga----tatatgcatgtggtacgaaatcacttcaaggtcgtcacctatatctagaccaccaaaggtct 15516221  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    ||||||||||| ||||||||||||| |||||| |||||||||| |||| || ||| |||| ||||||||| ||  ||||||||||||    
T  15516222 ctgcaaggccggagcccacaatctaaatcactaatggatctctgcaaggccaaagcccac-aaactagatcaccaaatgatctctgc 15516307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 39654340 - 39654529
Alignment:
Q  69 agactcatgtcatgatgtgcacctagttcgacacat-------atatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaag 161  Q
    |||||||||||||||| |||||||||||||||||||       | |||||| |||||||| ||||| ||||||| |||||||||||| |||||  |||||    
T  39654340 agactcatgtcatgatatgcacctagttcgacacatgacacatacatgcatatggtaccaaatcacttcaaggttgtcacctatatctagaccaccaaag 39654439  T
Q  162 gtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| ||||  ||||| |||| ||||||||| ||| ||||||||||||    
T  39654440 gtctctgcaagaccgaagcccacaatctagatcactgatggatctctgcaaggtcgaagcccac-aaactagatcactaaatgatctctgc 39654529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 30204845 - 30205046
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  |||  ||| ||||||||||||||||||| ||||||||  | |||||  | |||||||||||    
T  30204845 atcaattcacaattattcatacacaatcaccaatcac--atttccaa-ataagactcatgtcatgatatgcaccta--ttgacac--aaatgcatgtggt 30204937  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| ||||||||||||||||||||   |||||||||  ||| |||||||||||| || ||| | |||| ||||||| | |  ||||||| |||||||||    
T  30204938 accaaatcacctcaaggtcgtcacccgaatccagaccaccaagggtctctgcaagaccaaagtctacaaactagatctcaaaagatctctgcaagaccga 30205037  T
Q  218 agtccacaa 226  Q
    |||||||||    
T  30205038 agtccacaa 30205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 11199265 - 11199103
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| | |||||| |||||||||||||||| | ||| | | |||||||||||| ||||||||||||||||  || |||||||||||||||||    
T  11199265 catcaaatcacattcattcatgcacaatcaccaatcac-atttcacca-ataagactcatg-catgatgtgcacctagcccgccacatatatgcatgtgg 11199169  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccca 183  Q
    |||||| |||| |||||||||||||||||||| ||||| || |||||||||||||||||| ||||||    
T  11199168 taccatttcacttcaaggtcgtcacctatatctagaccatc-aaggtctctgcaaggccggagccca 11199103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 14060912 - 14060835
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  14060912 ataagactcatgtcatgatgtgcacctagttcgacacgtatatgcatgtgataccaaatcacctcaaggtcgtcacct 14060835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 7852256 - 7852374
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacc 120  Q
    |||||| |||||||||||||||||||||||||||  |||  ||| | ||||||||||||||||| ||||||||  |||||||||| ||||||||| ||||    
T  7852256 aattcatagttattcatacacaatcaccaatcac--atttgcaaaacaagactcatgtcatgatatgcaccta--tcgacacatacatgcatgtgatacc 7852351  T
Q  121 atatcacctcaaggtcgtcacct 143  Q
    | |||||||||||||||||||||    
T  7852352 aaatcacctcaaggtcgtcacct 7852374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 319335 - 319206
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    |||||||| |||| |||||||||||||||||||||||||||||    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||    
T  319335 acatcaatgcacaattattcatacacaatcaccaatcaccaatcgcatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgca 319238  T
Q  112 tgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||| |||||||||||||||||||||    
T  319237 tgtggtaccagatcacctcaaggtcgtcacct 319206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 11813330 - 11813444
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |   |||| |||    
T  11813330 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatcacctcagggtcgtcacccatatccagatctcaaaagatct 11813427  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  11813428 ctgccaggccgaagccc 11813444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 19572503 - 19572389
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |  ||| | |||    
T  19572503 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacccatatccagatc-ccaaggatct 19572407  T
Q  166 ctgcaaggccgaagccca 183  Q
    |||| |||||||||||||    
T  19572406 ctgctaggccgaagccca 19572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 50113842 - 50113720
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||| ||||||||||||||||||||||||||||||  ||  |||| |||||||||||||||| || ||||| || |  |||||||| ||||||||||    
T  50113842 catcaatccacagttattcatacacaatcaccaatcacatata-tcaa-ataagactcatgtcattatatgcacttatt--gacacataaatgcatgtgg 50113747  T
Q  117 taccatatcacctcaaggtcgtcacct 143  Q
    ||||  |||||||||||||||||||||    
T  50113746 taccggatcacctcaaggtcgtcacct 50113720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 38812669 - 38812589
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  38812669 ataagactcatgtcaccatgatatgcacctagttcgacacatatatgcatgtcgtaccaaatcacctcaaggtcgtcacct 38812589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 14522943 - 14522851
Alignment:
Q  163 tctctgcaaggccgaagcccacaat-ctagatcacta-tggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||| |||||| ||||||  ||||||||||| ||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||    
T  14522943 tctctgcaagaccgaagtccacaaaactagatcactaatggatctctgcaagaccgaagtccacaaaactagatcaccaaatgatctctgcta 14522851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 51160186 - 51160066
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||||||||||||||||||||||||||| ||  | |||  || ||||||||| |||||| ||||||||  |  |||||||||||||||||||    
T  51160186 atcaattcacagttattcatacacaatcaccaatca-catatatca--atgagactcatgccatgatatgcaccta--ttaacacatatatgcatgtggt 51160092  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  |||||||||||||    
T  51160091 accaaatctccaaaaggtcgtcacct 51160066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 22146000 - 22145829
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||  ||||||||||||||  ||  ||||  |||||||| |||||| |  |||||||| |  |||||||| |||||||||||    
T  22146000 atcaattcacaattattcatatgcaatcaccaatcacatata-tcaa--taagactcgtgtcatcacatgcacctatt--gacacataaatgcatgtggt 22145906  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatc 194  Q
    |||| || ||||||||||||||||| ||||||||||    || || ||||||||  |||||| |||||| |||||||    
T  22145905 accaaattacctcaaggtcgtcacccatatccagactactaagggcctctgcaataccgaagtccacaaactagatc 22145829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 33371041 - 33370962
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||||||   |||| | |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  33371041 ataagactcatgtcaacatgatatccacctagtccaacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 33370962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 12351559 - 12351438
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||| | |||||||||||||||||||| ||||  ||| |||| | |||||||| |||||||| ||||| || |  |||||||| ||||||||||    
T  12351559 catcaattcataattattcatacacaatcaccagtcac--att-tcaaaacaagactcacgtcatgatatgcacttatt--gacacataaatgcatgtgg 12351465  T
Q  117 taccatatcacctcaaggtcgtcacct 143  Q
    |||   |||||||||||||||||||||    
T  12351464 tactggatcacctcaaggtcgtcacct 12351438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 25057273 - 25057385
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||| ||||||||| |   |||| |||||    
T  25057273 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccataaggtcgtcacccatatccagatctcaaaagatctct 25057370  T
Q  168 gcaaggccgaagccc 182  Q
    || ||||||||||||    
T  25057371 gccaggccgaagccc 25057385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 5229721 - 5229675
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  5229721 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 5229675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 8630338 - 8630413
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| |||||||| ||||||||||||    
T  8630338 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatcacctccaggtcgtcacct 8630413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 17099243 - 17099331
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||| ||||||  ||||| ||||||||||| |||||||| |||||||||||||||| |||||| || || |||||||||||||||    
T  17099243 tctctgcaagaccgaagttcacaaactagatcactaaggatctctgcaagaccgaagtccac-aaactatatcac-caatgatctctgcta 17099331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 9592394 - 9592349
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9592394 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 9592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 17958069 - 17957985
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccaga 152  Q
    ||||||||||||||||||  ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  17958069 ataagactcatgtcatgagatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctatatccaga 17957985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 30141329 - 30141499
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat-----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgc 110  Q
    ||||||||||||| ||||||| ||| | |||||||||||||||     | |||| ||| ||||||||||||||| ||||| || |  |||||||| ||||    
T  30141329 acatcaattcacaattattcacacatactcaccaatcaccaatcacattttcaa-atatgactcatgtcatgatatgcacttatt--gacacataaatgc 30141425  T
Q  111 atgtggtaccatatcacctcaaggtcgtcacct--atatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||||||||||| ||| ||  |||||||||||||  | ||||||| |   |||| ||||||| ||||||||||||    
T  30141426 atgtggtaccaaatctccaaaaggtcgtcacctccaaatccagatctcaaaagatctctgccaggccgaagccc 30141499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 47983418 - 47983464
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  47983418 cgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 47983464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 47992705 - 47992751
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  47992705 cgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 47992751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 48001992 - 48002038
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  48001992 cgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 48002038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 48011278 - 48011324
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  48011278 cgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 48011324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 15516301 - 15516358
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaag 219  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||    
T  15516301 tctctgcaaggctgaagcccacaaactagatcactaatggatctctccaagaccgaag 15516358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 41660135 - 41660180
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  41660135 cgacacatatatgcatgtggtaccaaatcacctcaagatcgtcacc 41660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 7851991 - 7852026
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  7851991 atcaattcacagttattcatacacaatcaccaatca 7852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 11813209 - 11813244
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  11813209 atcaattcacagttattcatacacaatcaccaatca 11813244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 12796873 - 12796908
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  12796873 atcaattcacagttattcatacacaatcaccaatca 12796908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 16819190 - 16819225
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  16819190 atcaattcacagttattcatacacaatcaccaatca 16819225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 18908922 - 18908957
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  18908922 atcaattcacagttattcatacacaatcaccaatca 18908957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 19945098 - 19945202
Alignment:
Q  34 tcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaag 133  Q
    ||||| |||||||||||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||    
T  19945098 tcataaacaatcaccaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaag 19945192  T
Q  134 gtcgtcacct 143  Q
    ||||||||||    
T  19945193 gtcgtcacct 19945202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 38166363 - 38166398
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  38166363 atcaattcacagttattcatacacaatcaccaatca 38166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 49230667 - 49230787
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||| ||||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  49230667 atcaattcacaaatattcattcacaatctccaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 49230761  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| |  ||| ||||||||||    
T  49230762 accaaatctcaacaacgtcgtcacct 49230787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 17913909 - 17913834
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  17913909 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 17913834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 7852122 - 7852159
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaat 58  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7852122 aattcatagttattcatacacaatcaccaatcaccaat 7852159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 7852188 - 7852225
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaat 58  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7852188 aattcatagttattcatacacaatcaccaatcaccaat 7852225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 15574524 - 15574620
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  15574524 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacc 15574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 15613543 - 15613639
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  15613543 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacc 15613638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 15874686 - 15874731
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  15874686 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 15874731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 23081842 - 23081746
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  23081842 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacc 23081747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 48420193 - 48420238
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  48420193 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 48420238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 55442408 - 55442367
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  55442408 gacacataaatgcatgtggtaccagatcacctcaaggtcgtc 55442367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 13816026 - 13816058
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  13816026 atcaattcacagttattcatacacaatcaccaa 13816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 14846320 - 14846243
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  14846320 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 14846243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 16819405 - 16819482
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  16819405 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 16819482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 23491006 - 23491079
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  23491006 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 23491079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 49230542 - 49230574
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||||||||||    
T  49230542 aattcacagttattcatacacaatcaccaatca 49230574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 2451199 - 2451164
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  2451199 atcaattcacagttattcatacacgatcaccaatca 2451164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 11812950 - 11812985
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11812950 atcaattcacaattattcatacacaatcaccaatca 11812985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 15989507 - 15989550
Alignment:
Q  101 acatatatgcatgtggtaccatatcacctc-aaggtcgtcacct 143  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  15989507 acatatatgcatgtggtaccaaatcacctcaaaggtcgtcacct 15989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 19944954 - 19944989
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19944954 atcaattcacaattattcatacacaatcaccaatca 19944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 22273277 - 22273312
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  22273277 atcaattcacagttattcatacacgatcaccaatca 22273312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 30141133 - 30141168
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30141133 atcaattcacatttattcatacacaatcaccaatca 30141168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 16259544 - 16259619
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||| ||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  16259544 ataagacccatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 16259619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 19230550 - 19230625
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||| |||||||| ||| ||  || ||||||||||    
T  19230550 ataagactcatgccatgatatgcacctatt--gacacatatatgcatatggtaccaaatctccaaaacgtcgtcacct 19230625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 33340341 - 33340416
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||| || ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  33340341 ataagactcatgtcataatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 33340416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 38166435 - 38166477
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat 58  Q
    ||||||||||| | ||||||||||| |||||||||||||||||    
T  38166435 acatcaattcataattattcatacataatcaccaatcaccaat 38166477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 12490376 - 12490331
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||| ||||||||||||||||    
T  12490376 gacacataaatgcatgtggtaccgaatcatctcaaggtcgtcacct 12490331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 15860881 - 15860767
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||| ||||||||  | ||||||||| ||||||| |||||| ||| ||  | |||||||||| | ||||||| |   |||  |||    
T  15860881 ataagactcatgccatgatatgcaccta--ttgacacatatgtgcatgttgtaccaaatctccaaagggtcgtcacccaaatccagatctcaaaatatct 15860784  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  15860783 ctgccaggccgaagccc 15860767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 2048561 - 2048634
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| |||  |  |||||||||||||    
T  2048561 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatcttcaaaaggtcgtcacct 2048634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 2450985 - 2450908
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  2450985 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 2450908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 12266148 - 12266071
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  12266148 acataagactcatgatatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 12266071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 17523991 - 17523951
Alignment:
Q  213 accgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||| ||||||||||||||| ||| ||||||||||||||    
T  17523991 accgaattccacaaaactagatcactaaatgatctctgcta 17523951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 18909188 - 18909265
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  18909188 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 18909265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 22273543 - 22273620
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  22273543 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 22273620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 16571872 - 16571642
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| |||||||||||||||||||||||||||||||  ||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16571872 catcaactcacagttattcatacacaatcaccaatcac--att-tcaaaataagacttatgtcatgttgtgcacctagttcgacacatatatgcatgtgg 16571776  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16571775 taccatttcacttcaaggtcatcacctatatctagaccgtcaaaggtctttgcaaggccgaagcccacaatctagatcactaatggatctctacaagacc 16571676  T
Q  216 gaagtccacaaaactagattactcaatgatctctg 250  Q
    ||||||||| |||||| || ||| |||||||||||    
T  16571675 gaagtccac-aaactaaatcactaaatgatctctg 16571642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 16593790 - 16594020
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| |||||||||||||||||||||||||||||||  ||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16593790 catcaactcacagttattcatacacaatcaccaatcac--att-tcaaaataagacttatgtcatgttgtgcacctagttcgacacatatatgcatgtgg 16593886  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16593887 taccatttcacttcaaggtcatcacctatatctagaccgtcaaaggtctttgcaaggccgaagcccacaatctagatcactaatggatctctacaagacc 16593986  T
Q  216 gaagtccacaaaactagattactcaatgatctctg 250  Q
    ||||||||| |||||| || ||| |||||||||||    
T  16593987 gaagtccac-aaactaaatcactaaatgatctctg 16594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 49049527 - 49049353
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||    
T  49049527 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccgccaaaggtct 49049428  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactc 239  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  49049427 ctgcaaggccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactc 49049353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 15629153 - 15629389
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| |||||||| |||||||| || |||| | ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15629153 catcaactcacatttattcatgcacaatcatcattcac-atttcacca-ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 15629250  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||  ||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  15629251 taccatttcaattcatggtcgtcacctatatctagaccgccaaaggtctctacaaggccgaagcccacaatctagatcactaatggaactctgcaagacc 15629350  T
Q  216 gaagtccacaaaactagattactcaatgatctctgctac 254  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  15629351 gaagtccacaaaactagatcactaaatgatctctgctac 15629389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 13273172 - 13273360
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||   |||||||||    
T  13273172 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatttcacttcaaggtcgtcatctatatctagactaccaaaggtct 13273271  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||    
T  13273272 ctgcaaggccgaggcccacaatctagatcactaatggatctctgcaagactgaagtccacaaaactagatcactaaatgatctctgcta 13273360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 12249892 - 12249659
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||||||||||| |||| ||||||  ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12249892 catcaattcacagttattcatacacattcactaatcac--att-tcgaaataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 12249796  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    ||||||||||| |||| ||||||||| ||||| |||||   ||||| ||||| ||  |||||||||||||||||||||||| |||||||||| |||||||    
T  12249795 taccatatcacttcaaagtcgtcaccaatatctagaccaaaaaaggactctgaaaaaccgaagcccacaatctagatcactaatggatctctgcaagacc 12249696  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||| ||||||||| ||| ||||||| ||||||    
T  12249695 gaagtccac-aaactagatcactaaatgatccctgcta 12249659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 15824177 - 15824018
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||| ||| |||||    
T  15824177 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcatccatatcctgaccgccaagggtct 15824080  T
Q  166 ctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  15824079 ctgcaaggccgaagcccacaatctagatcactaaggatctctgcaagaccgaagtccacaaa 15824018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 44863593 - 44863798
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||| |||||||||||||||||||||||||  || | ||||  |||||||||||||||||| | ||||||  |||||||||||||||||||||    
T  44863593 atcaattcacaattattcatacacaatcaccaatcac--atacatcaa--taagactcatgtcatgatattcaccta--tcgacacatatatgcatgtgg 44863686  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagacc 215  Q
    ||||| |||||||||||||||||||| |||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||    
T  44863687 taccaaatcacctcaaggtcgtcacccatatccagaccaccaagggtctctgcaaggcctgaagcccaaaatctagatcactaaggatctctgcaagacc 44863786  T
Q  216 gaagtccacaaa 227  Q
    ||||||||||||    
T  44863787 gaagtccacaaa 44863798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 142018 - 142223
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||| ||||||||||||||| |||||||||  || | ||||  |||||||||||||||||| ||||||||  || ||||||||||||||||||    
T  142018 atcaattcacaattattcatacacaataaccaatcac--atacatcaa--taagactcatgtcatgatatgcaccta--tcaacacatatatgcatgtgg 142111  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaagg-ccgaagcccacaatctagatcactatggatctctacaagacc 215  Q
    ||||| |||||||||||||||||||| |||||||||||  ||| ||||||||||||| |  ||||||| |||||||||||||| |||||||| |||||||    
T  142112 taccaaatcacctcaaggtcgtcacccatatccagaccaccaagggtctctgcaaggtctaaagcccaaaatctagatcactaaggatctctgcaagacc 142211  T
Q  216 gaagtccacaaa 227  Q
    ||||||||||||    
T  142212 gaagtccacaaa 142223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 10862590 - 10862405
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||  ||| || ||||| |||||||||||||||||||| |||||  |||||||||    
T  10862590 ataagacttatgtcatgatatgcacctagttcgacacatatatgcatgcagtagcaaatcacttcaaggtcgtcacctatatctagaccaccaaaggtct 10862491  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||| |||||| |||| ||||||||| ||| | ||||||||||    
T  10862490 ctgcaaggccgaagcccacaatctagatcactaatggatctctgtaaggccgaagcccac-aaactagatcactaagtgatctctgc 10862405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 47288126 - 47288331
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||| |||||||||||||||||||||| ||  || | ||||  |||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  47288126 atcaattcacaattattcatacacaatcaccaattac--atacatcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtgg 47288219  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagacc 215  Q
    ||||| |||| | |||||| |||||| |||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||| |||||| | |||||||    
T  47288220 taccaaatcatcccaaggttgtcacccatatccagaccaccaagggtctctgcaaggcctgaagcccaaaatctagatcactaaggatctttgcaagacc 47288319  T
Q  216 gaagtccacaaa 227  Q
    ||||||||||||    
T  47288320 gaagtccacaaa 47288331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 11285642 - 11285829
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaagg-tc 164  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| || | ||||||||||||||||||  |||||||  ||| || ||    
T  11285642 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaattaactcaaggtcgtcacctatccccagaccaccaaggggtc 11285739  T
Q  165 tctgcaaggccgaagcccacaatctagatcacta-tggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||  |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||    
T  11285740 tctgcaaggctaaagcccacaaactagatcactaatggatctctgcaagaccgaagtccacaaaactagatcaccaaatgatctctgcta 11285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 13867761 - 13867635
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |  ||| |||||    
T  13867761 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacccatatccagatcaccaagggtct 13867664  T
Q  166 ctgcaaggccgaagcccacaatctagatc 194  Q
     | |||| |||||| |||||| |||||||    
T  13867663 ttacaagaccgaagtccacaaactagatc 13867635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 26071981 - 26071861
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  26071981 atcaattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggt 26071887  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    | |  |||||||||||||||||||||    
T  26071886 atcggatcacctcaaggtcgtcacct 26071861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 26095768 - 26095648
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  26095768 atcaattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggt 26095674  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    | |  |||||||||||||||||||||    
T  26095673 atcggatcacctcaaggtcgtcacct 26095648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 3893535 - 3893664
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    |||||||| |||| |||||||||||||||||||||||||||||    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||    
T  3893535 acatcaatgcacaattattcatacacaatcaccaatcaccaatcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgca 3893632  T
Q  112 tgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||  |||||||||||||||||||||    
T  3893633 tgtggtaccggatcacctcaaggtcgtcacct 3893664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 9058310 - 9058230
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||   |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9058310 ataagactcatgtcaacatgatatgcacctagttcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 9058230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 45453970 - 45453850
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||   | ||||||||||||||||||| ||||| ||  | |||||||| ||||||||||    
T  45453970 catcaattcacagctattcatacacaatcaccaatca-caattc---aaataagactcatgtcatgatatgcactta--ttgacacataaatgcatgtgg 45453877  T
Q  117 taccatatcacctcaaggtcgtcacct 143  Q
    ||||  |||||||||||||| ||||||    
T  45453876 taccggatcacctcaaggtcatcacct 45453850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 12545478 - 12545351
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata-tcacctcaaggtcgtcacctatatccagaccgtcaaaggtc 164  Q
    |||||||| |||||||||| |||||| | |  |||||||||||||||||||||||| | ||||||||||||||||||||  |||||||||  ||| ||||    
T  12545478 ataagacttatgtcatgatatgcaccaatt--gacacatatatgcatgtggtaccaaaatcacctcaaggtcgtcacctgaatccagaccaccaagggtc 12545381  T
Q  165 tctgcaaggccgaagcccacaatctagatc 194  Q
    |||||||| | |||| |||||| |||||||    
T  12545380 tctgcaagacagaagtccacaaactagatc 12545351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 12753321 - 12753450
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacat-aagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    ||||||||  |||||||||||||||| |||||||||||||||    | |||| |  ||||||||||||||||| ||||| || |  |||||||| |||||    
T  12753321 catcaatttgcagttattcatacacagtcaccaatcaccaatcacatttcaaaaacaagactcatgtcatgatatgcacttatt--gacacataaatgca 12753418  T
Q  112 tgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||| |||||||||||||||||||||    
T  12753419 tgtggtaccaaatcacctcaaggtcgtcacct 12753450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 11582608 - 11582498
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||| |||||||| |  |||||||| ||||||||||||||| ||||  ||| |||||||||| ||||||||| |   |||| |||    
T  11582608 ataagactcatgccatgatatgcacctatt--gacacataaatgcatgtggtaccaaatcatttcagggtcgtcacccatatccagatctcaaaagatct 11582511  T
Q  166 ctgcaaggccgaa 178  Q
    |||| ||||||||    
T  11582510 ctgctaggccgaa 11582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 13038882 - 13038768
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||| ||||||| |||||| |||||||| |  |||||||||||||||||||||||| ||||  ||| |||||||||  ||||||||| |   |||| |||    
T  13038882 ataaaactcatgccatgatatgcacctatt--gacacatatatgcatgtggtaccaaatcatttcagggtcgtcactcatatccagatctcaaaagatct 13038785  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  13038784 ctgccaggccgaagccc 13038768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 20587254 - 20587210
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcac 141  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  20587254 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcac 20587210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 15952801 - 15952681
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||| ||||||||  ||| |||| ||||||||||||||||||| ||||| ||  | |||||||| |||||||||||    
T  15952801 atcaattcacaaatattcattcacaatctccaatcac--attttcaa-ataagactcatgtcatgatatgcactta--ttgacacataaatgcatgtggt 15952707  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    ||||  || |  ||||||||||||||    
T  15952706 accaagtctcaacaaggtcgtcacct 15952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 4483268 - 4483314
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  4483268 cgacacatatatgcatgtggtaccaaatcacgtcaaggtcgtcacct 4483314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 113020 - 112899
Alignment:
Q  20 caattcacagttattcatacacaatcaccaatcaccaat-----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgt 114  Q
    ||||||||| |||||||||| |||| | |||||||||||     | |||| ||||||||||||||||||| ||||| || |   ||||||| ||||||||    
T  113020 caattcacatttattcatacgcaattatcaatcaccaatcacattttcaa-ataagactcatgtcatgatatgcacttatta--acacataaatgcatgt 112924  T
Q  115 ggtaccatatcacctcaaggtcgtc 139  Q
    ||||||  |||||||||||||||||    
T  112923 ggtaccgaatcacctcaaggtcgtc 112899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 8565222 - 8565177
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  8565222 cgacaaatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 8565177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 28718977 - 28719022
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  28718977 cgacacatatatgcatgtggtaccaagtcacctcaaggtcgtcacc 28719022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 369364 - 369463
Alignment:
Q  40 acaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||    
T  369364 acaatcaccaatcacaaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtc 369459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 9322707 - 9322663
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  9322707 gacacatatatgcatgtggtaccaaatcacatcaaggtcgtcacc 9322663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 18305434 - 18305370
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    ||||||||||||||||||||| || ||| ||||| |  ||||||| |||||||||||||||||||    
T  18305434 tctctgcaaggccgaagcccaaaaactaaatcacaaatgatctctgcaagaccgaagtccacaaa 18305370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 2192650 - 2192615
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  2192650 atcaattcacagttattcatacacaatcaccaatca 2192615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 7286372 - 7286337
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  7286372 atcaattcacagttattcatacacaatcaccaatca 7286337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 7291057 - 7291092
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  7291057 atcaattcacagttattcatacacaatcaccaatca 7291092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 14253115 - 14253080
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  14253115 atcaattcacagttattcatacacaatcaccaatca 14253080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 15952903 - 15952868
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  15952903 atcaattcacagttattcatacacaatcaccaatca 15952868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 1938439 - 1938364
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  1938439 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 1938364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 12545597 - 12545563
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatc 52  Q
    |||||||||||||||||||||||||||||||||||    
T  12545597 atcaattcacagttattcatacacaatcaccaatc 12545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 32496218 - 32496143
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  32496218 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 32496143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 13388489 - 13388534
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  13388489 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 13388534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 12545651 - 12545615
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||| ||||||||||||||||||||||||||    
T  12545651 atcaattcacggttattcatacacaatcaccaatcac 12545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 13867930 - 13867894
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13867930 atcaattcacagttatttatacacaatcaccaatcac 13867894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 36051090 - 36051206
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaa--ggtcgtcacctatatccagaccgtcaaaggt 163  Q
    ||||||||||||| ||| | |||||||| |  |||||||||||||||||||||||| ||| ||  ||  |||||||||| | ||||||| |   |||| |    
T  36051090 ataagactcatgttatgttatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaagggtcgtcacccaaatccagatctcaaaagat 36051187  T
Q  164 ctctgcaaggccgaagccc 182  Q
    |||||| ||||||||||||    
T  36051188 ctctgccaggccgaagccc 36051206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 2024814 - 2024849
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2024814 atcaattcacagttattcatacacaatcatcaatca 2024849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 16480880 - 16480845
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||| ||||||||||||||||||||||||||    
T  16480880 atcaattcatagttattcatacacaatcaccaatca 16480845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 21676678 - 21676631
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctc-aaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  21676678 cgacacatatatgcatgtggtaccaaatcgcctcaaaggtcgtcacct 21676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 13376196 - 13376241
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| |||||| |||||||  |||||||||||||||||||||    
T  13376196 gacacataaatgcatatggtaccgaatcacctcaaggtcgtcacct 13376241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 15914071 - 15914030
Alignment:
Q  102 catatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  15914071 cataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 15914030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 12545348 - 12545274
Alignment:
Q  158 aaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagat 234  Q
    |||| |||||||||||||||| |||| || ||||||||| || ||||||| |||| |||||| ||| ||||||||||    
T  12545348 aaagatctctgcaaggccgaaacccaaaaactagatcacaat-gatctctgcaaggccgaagccca-aaaactagat 12545274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 16416968 - 16417045
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  16416968 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 16417045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 16480660 - 16480547
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaa-ggtcgtcacctatatccagaccgtcaaaggtctc 166  Q
    ||||||||||||||||| ||||| || |  || ||||| ||||||||||||||| ||| ||  || |||||||||| | ||||||| |   |||| ||||    
T  16480660 aagactcatgtcatgatatgcacttatt--gatacataaatgcatgtggtaccaaatctccaaaaaggtcgtcacccaaatccagatctcaaaagatctc 16480563  T
Q  167 tgcaaggccgaagccc 182  Q
    ||| ||||||||||||    
T  16480562 tgccaggccgaagccc 16480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 18255486 - 18255409
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  ||| |||| ||||||||||||||| ||| ||  |||||||||||||    
T  18255486 acataagactcatgttatgatatgcacttatt--gactcataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 18255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 35524196 - 35523969
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    ||||||||||||||||||||||||||||||| |||||  ||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  35524196 tcacagttattcatacacaatcaccaatcac-aattcaaaaca--agactcatgtcgtgatgtgcacctagtccgacacatatatgcatgtggtaccatt 35524100  T
Q  124 tcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtcc 222  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  35524099 tcacttcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggccggagcccacaaatctagatcactaaggatctctgcaagaccgaagtcc 35524000  T
Q  223 acaaaactagattactcaatgatctctgcta 253  Q
    || ||||||||| ||| ||||||||||||||    
T  35523999 accaaactagatcactaaatgatctctgcta 35523969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 51658107 - 51657873
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaaca-taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||| ||||| ||||||||||||||||| || ||||  |||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51658107 atcaaatcacatttattcatacacaatcatcattcac--attc-caccaataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 51658011  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| ||||  ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||| |    
T  51658010 taccatttcactccaaggtcgtcacctatatctagaccgccaaaggtctctgcaaggccgaagcctacaatctagatcactaacggatctctgcaagatc 51657911  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||| |||||||||||| ||| ||||||||||||||    
T  51657910 gaagtctacaaaactagatcactaaatgatctctgcta 51657873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 22408012 - 22407808
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| ||||||| |||||||||||||||||  ||  ||||  ||||||| |||||||||| ||||| ||  ||||||||||||||||||||||    
T  22408012 atcaattcacaattattcacacacaatcaccaatcacatata-tcaa--taagacttatgtcatgatatgcacata--tcgacacatatatgcatgtggt 22407918  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| |||||||||||||||||||| |||||||||||  ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22407917 accaaatcacctcaaggtcgtcacccatatccagaccaccatgggtctctacaaggccgaagcccacaatctagatcactatggatctctacaagaccga 22407818  T
Q  218 agtccacaaa 227  Q
    ||||||||||    
T  22407817 agtccacaaa 22407808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 21716587 - 21716820
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||| ||||| |||||||| |||||| ||||||||| ||||| | | ||| |||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  21716587 atcaaatcacatttattcatgcacaattaccaatcac-aattcaccaaata-gactcatg-catgatgtgtacctagaccgacacatatatgcatgtggt 21716683  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccg 216  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||| ||||||||    
T  21716684 accatattatctcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggccagagcccacaaatctagatcactaaggatctctgcaagaccg 21716783  T
Q  217 aagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||  || || ||| ||||||||||||||    
T  21716784 aagtccacaaatttaaatcactaaatgatctctgcta 21716820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 20956702 - 20956517
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||  |||||||||    
T  20956702 ataagactcatgtcatgatatgcacctagttcgacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacctatatctagaccaccaaaggtct 20956603  T
Q  166 ctgcaaggccgaagcccacaatctagatca-ctatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||| ||||||||||| | |||||||||| |||| | |||| |||| ||||||||| ||| ||||||||||||    
T  20956602 ctgcaaggccgaagcccataatctagatcaccaatggatctctgcaaggctgaagcccac-aaactagatcactaaatgatctctgc 20956517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 49966045 - 49966263
Alignment:
Q  30 ttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacct 129  Q
    |||||||||||||||||||||||||  ||  ||||  |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||    
T  49966045 ttattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacct 49966139  T
Q  130 caaggtcgtcacctatatccagaccgtcaaagg----tctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccaca 225  Q
    ||||||||||||| |||||||||||  ||| ||    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||     
T  49966140 caaggtcgtcacccatatccagaccaccaagggtctctctctgcaaggctgaagcccataatctagatcactatggatctctgcaagaccgaagtccac- 49966238  T
Q  226 aaactagattactcaatgatctctgc 251  Q
    ||||||||| ||| ||||||||||||    
T  49966239 aaactagatcact-aatgatctctgc 49966263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 22836986 - 22836801
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |  |||||||||    
T  22836986 ataagactcatgtcatgatatgcacctagttcgacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacctatatctagaacaccaaaggtct 22836887  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||||||||||||||||| |||||| ||| || |  ||| | |||| ||||||||| ||| ||||||||||||    
T  22836886 ctgcaaggccgaagcccacaatctagatcactaatggatttctgcatggtcgatgcccac-aaactagatcactaaatgatctctgc 22836801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 27673283 - 27673465
Alignment:
Q  69 agactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctg 168  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||  |||| |||||| ||||||||||||| |||||  ||||||||||||    
T  27673283 agactcatgtcatgatatgcacctagtttgacacatatatgcatgtggtaccaactcacttcaagggcgtcacctatatctagaccaccaaaggtctctg 27673382  T
Q  169 caaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||  | ||| |||| ||||||||| ||| ||||||||||||    
T  27673383 caaggccgaagcccacaatctagatcactaatggatctctgcaaggacaaagcccac-aaactagatcactaaatgatctctgc 27673465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 2422851 - 2422651
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  |||  ||| ||||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  2422851 atcaattcacaattattcatacacaatcaccaatcac--atttccaa-ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggt 2422757  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| |||||||||| ||||||||| ||||||| |||   || || ||||||||| |||||| |||||| ||||||| | |  ||||||| |||||| ||    
T  2422756 accaaatcacctcaaagtcgtcacccatatccaaaccactaagggcctctgcaagaccgaagtccacaaactagatctcaaaagatctctgcaagactga 2422657  T
Q  218 agtcca 223  Q
    ||||||    
T  2422656 agtcca 2422651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 9785972 - 9785858
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |   |||| |||    
T  9785972 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacccatatccagatctcaaaagatct 9785875  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  9785874 ctgccaggccgaagccc 9785858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 35053278 - 35053407
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||    
T  35053278 acatcaattcacaattattcatacacaatcaccaaacaccattcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgca 35053375  T
Q  112 tgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||  |||||||||||||||||||||    
T  35053376 tgtggtaccggatcacctcaaggtcgtcacct 35053407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 20895463 - 20895349
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| |||| |||| |||||||||| |||||| || |   |||| |||    
T  20895463 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatcatctcagggtcgtcacccatatcctgatctcaaaagatct 20895366  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  20895365 ctgccaggccgaagccc 20895349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 5676314 - 5676199
Alignment:
Q  30 ttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatc 125  Q
    |||||||||||||||||||||| ||||||    | || | ||||||||||||||||||| ||||| || |  ||| |||| |||||||||||||| ||||    
T  5676314 ttattcatacacaatcaccaattaccaatcacatttccaaataagactcatgtcatgatatgcacttatt--gactcataaatgcatgtggtaccgtatc 5676217  T
Q  126 acctcaaggtcgtcacct 143  Q
    ||||||||||||||||||    
T  5676216 acctcaaggtcgtcacct 5676199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 22407832 - 22407744
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||| |||| |||||| |||||| ||| ||||||| ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  22407832 tctctacaagaccgaagtccacaaactatatcactaaggatctctacaagaccgaagtccac-aaactagatcac-caatgatctctgcta 22407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 37235639 - 37235559
Alignment:
Q  66 ataagactcatgtcatgatg---tgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||  |||   ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  37235639 ataagactcatgtcaacatgaaatgcgcctagtttgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 37235559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 18505814 - 18505896
Alignment:
Q  100 cacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccca 183  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |  ||| | ||||||| |||||||||||||    
T  18505814 cacatatatgcatgtggtaccaaatctcctcaaggtcgtcacccatatccagatc-ccaaggatctctgctaggccgaagccca 18505896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 5472028 - 5471983
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  5472028 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 5471983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 21193678 - 21193735
Alignment:
Q  86 tgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||| |||||||    
T  21193678 tgcacctagtctgacacatatatgcatgtggtaccaaatcacctcaaggttgtcacct 21193735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 22145036 - 22144991
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22145036 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 22144991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 41213311 - 41213266
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  41213311 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 41213266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 41217919 - 41218018
Alignment:
Q  40 acaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    |||||||||||||||  |||  ||| | ||||||||||||||||| ||||||||  |||| | |||||| |||||||||||  |||||||||||||||||    
T  41217919 acaatcaccaatcac--atttgcaaaacaagactcatgtcatgatatgcaccta--tcgatagatatatacatgtggtaccggatcacctcaaggtcgtc 41218014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 5769856 - 5769813
Alignment:
Q  99 acacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5769856 acacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 5769813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 15863137 - 15863017
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||| ||||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  15863137 atcaattcacaaatattcattcacaatctccaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 15863043  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  |||||||||||||    
T  15863042 accaaatctccaaaaggtcgtcacct 15863017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 20444237 - 20444312
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||| |||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||||||||||    
T  20444237 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcgtcacct 20444312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 37846139 - 37846064
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||| |||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||||||||||    
T  37846139 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcgtcacct 37846064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 8541349 - 8541308
Alignment:
Q  79 catgatgtgcacctagttcgacacatatatgcatgtggtacc 120  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  8541349 catgatatgcacctagttcgacacatatatgcatgtggtacc 8541308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 8606588 - 8606547
Alignment:
Q  79 catgatgtgcacctagttcgacacatatatgcatgtggtacc 120  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  8606588 catgatatgcacctagttcgacacatatatgcatgtggtacc 8606547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 20821476 - 20821521
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  20821476 cgacacatatatgcatgtggtatcaaatcacctcaaggtcgtcacc 20821521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 20252491 - 20252527
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  20252491 atcaattcacagttattcatacacaatcaccaatcac 20252527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 41217695 - 41217731
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  41217695 atcaattcacagttattcatacacaatcaccaatcac 41217731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 77677 - 77630
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctc-aaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  77677 cgacacatatatgcatgtggtaccaaatcacctcaaaggtcgtcacct 77630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 15863265 - 15863230
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  15863265 atcaattcacagttattcatacacaatcaccaatca 15863230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 22365181 - 22365293
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    |||||||||||||| || ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||| ||||||||| |   |||| |||||    
T  22365181 aagactcatgtcattatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacccatatccagatctcaaaagatctct 22365278  T
Q  168 gcaaggccgaagccc 182  Q
    || | ||||||||||    
T  22365279 gccaagccgaagccc 22365293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 41210509 - 41210584
Alignment:
Q  107 atgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||||||| |   |||| ||||||| ||||||||||||    
T  41210509 atgcatgtggtaccaaatctcctaaaggtcgtcacccatatccagatctcaaaagatctctgccaggccgaagccc 41210584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 20929970 - 20930045
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  20929970 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 20930045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22352625 - 22352700
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  22352625 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 22352700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 44036566 - 44036491
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  44036566 ataagactcatgtcatgatatgcacttact--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 44036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 5676386 - 5676346
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat 58  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  5676386 atcaatacacaattattcatacacaatcaccaatcaccaat 5676346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 20530001 - 20530054
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  20530001 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtacca 20530054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 21857978 - 21858094
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaa--ggtcgtcacctatatccagaccgtcaaaggt 163  Q
    |||||||||||| |||||| ||||||||  | ||||||||||||||| |||||||| ||| ||  ||  |||||||||| | ||||||| |   |||| |    
T  21857978 ataagactcatgccatgatatgcaccta--ttgacacatatatgcatatggtaccaaatctccaaaaagggtcgtcacccaaatccagatctcaaaagat 21858075  T
Q  164 ctctgcaaggccgaagccc 182  Q
    |||||| ||||||||||||    
T  21858076 ctctgccaggccgaagccc 21858094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 22226478 - 22226555
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  22226478 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 22226555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 35935241 - 35935164
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  35935241 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 35935164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 22250820 - 22250785
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||| |||||||||    
T  22250820 atcaattcacagttattcatacacaaccaccaatca 22250785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 38035264 - 38035221
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcac 141  Q
    |||||||| ||||||||||||||  |||||||||||||||||||    
T  38035264 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcac 38035221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 36357980 - 36357938
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtca 140  Q
    |||||||| ||||||||||||||  ||||||||||||||||||    
T  36357980 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtca 36357938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 13378404 - 13378359
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||| || ||||||||||||||  |||||||||||||||||||||    
T  13378404 gacacctaaatgcatgtggtaccgaatcacctcaaggtcgtcacct 13378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 19601704 - 19601749
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||    
T  19601704 gacatataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 19601749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 17147277 - 17147354
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  17147277 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 17147354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 20895558 - 20895526
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    ||||||||| |||||||||||||||||||||||    
T  20895558 atcaattcatagttattcatacacaatcaccaa 20895526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 41217823 - 41217855
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    ||||||||||| |||||||||||||||||||||    
T  41217823 atcaattcacatttattcatacacaatcaccaa 41217855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 45050164 - 45050260
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| | ||| |||||||| ||||||||||||||| ||| ||  |||||| |||||    
T  45050164 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcactt-gtt-gacacataaatgcatgtggtaccaaatctccaaaaggtcatcacc 45050259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 145312 - 145546
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||||||||||||||||||||||| | ||||  ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  145312 catcaattcacagttattcatacacaatcactactcac--att-tcaaaataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 145408  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| | || || ||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||||    
T  145409 taccattttacttcgaggtcatcacctatatctagatcgtcaaaggtctctgcaaggccggagcccacaatctagatcactaatggatctttgcaagacc 145508  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  145509 gaagtccacaaaactagatcactaaatgatctctgcta 145546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 22691727 - 22691497
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||| | | ||||||| |||| ||||||||| ||||||  |||||||||||||||||||||    
T  22691727 atcaaatcacatttattcatgcacaatcaccaatcac-aattcgcca-ataagacacatg-catgatgtgtacctagaccgacacatatatgcatgtggt 22691631  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccg 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  22691630 accatatcacctcaaggtcttcacctatatccagaccgtcaaaggtctctgtaaggccgaagcccacaaatctagatcactaaggatctctgcaagaccg 22691531  T
Q  217 aagtccacaaaactagattactcaatgatctctg 250  Q
    |||||||||||||||||| ||| |||||||||||    
T  22691530 aagtccacaaaactagatcactaaatgatctctg 22691497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 22696374 - 22696144
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||| | | ||||||| |||| ||||||||| ||||||  |||||||||||||||||||||    
T  22696374 atcaaatcacatttattcatgcacaatcaccaatcac-aattcgcca-ataagacacatg-catgatgtgtacctagaccgacacatatatgcatgtggt 22696278  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccg 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  22696277 accatatcacctcaaggtcttcacctatatccagaccgtcaaaggtctctgtaaggccgaagcccacaaatctagatcactaaggatctctgcaagaccg 22696178  T
Q  217 aagtccacaaaactagattactcaatgatctctg 250  Q
    |||||||||||||||||| ||| |||||||||||    
T  22696177 aagtccacaaaactagatcactaaatgatctctg 22696144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 31954 - 31723
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| |||||||| |||||||| ||||||| | ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31954 catcaaatcacatttattcatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 31857  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| ||||||||||||| |||||| |||||| |||| |||| ||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  31856 taccatttcacttcaaggtcgtcacatatatctagaccgccaaatgtctatgcaaggccgaagcctacaatctagatcactaatggatctctgcaagacc 31757  T
Q  216 gaagtccacaaaactagattactcaatgatctct 249  Q
    ||||||||||||||||||| ||| ||||||||||    
T  31756 gaagtccacaaaactagatcactaaatgatctct 31723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 7319867 - 7320099
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| | ||||||||||||||| || |||| | ||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7319867 catcaaatcacattcattcatacacaatcatcattcac-atttcacca-ataagactcatgtcatgatgtgtacctagttcgacacatatatgcatgtgg 7319964  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  7319965 taccatttcacttcaaggtcgtcacctatatctagaccgccaaaggtctctgcaaggctgaagcccacaatctagatcactaatggatctctgcaagacc 7320064  T
Q  216 gaagtccacaaaactagattactcaatgatctctg 250  Q
    ||||||||||| |||| || ||| |||||||||||    
T  7320065 gaagtccacaatactatatcactaaatgatctctg 7320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 24573125 - 24572940
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc-acctatatccagaccgtcaaaggtc 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| |||||||||    
T  24573125 ataagactcatgtcatgatgtgcacctagttcgacccatatatgcatgtggtaccatttcacttcaaggtcgtcaacctatatctagaccttcaaaggtc 24573026  T
Q  165 tctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctct 249  Q
     |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  24573025 actgcaaggccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctct 24572940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 28972422 - 28972656
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| |||||||| |||||||| ||||||| | ||| | | |||||||||||| ||||||||| ||||||  ||||||||||||||||||||    
T  28972422 catcaaatcacatttattcatgcacaatcatcaatcac-atttcacca-ataagactcatg-catgatgtgtacctagcccgacacatatatgcatgtgg 28972518  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| ||||||||||||| || ||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  28972519 taccatttcacttcaaggtcgtcacatacatctagaccgtcaaaggtctctgcaaggccggagcccacaatctagatcactaatggatctctgcaagacc 28972618  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  28972619 gaagtccacaaaattagatcactcaatgatctctgcta 28972656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 22581663 - 22581478
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||    
T  22581663 ataagactcatgtcatgatgtgcacctagtccgacacataaatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccgtc-aaggtct 22581565  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||| ||| |||||| |||||||    
T  22581564 ctgcaaggccgaagcccacaatctagatctctaatggatctctgcaagaccgaagtccac-aaactagatcact-aatgatttctgcta 22581478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 4449959 - 4449773
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||    
T  4449959 ataagactcatg-catgatgtgtacctagaccgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatttctagaccgtcaaaggtct 4449861  T
Q  166 ctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||    
T  4449860 ctgcaaggccggagcccacaaatctagatcactaaggatctctgcaagaccgaagtccac-aaactagatcactaaatgatctctgcta 4449773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 269617 - 269803
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||||||||    
T  269617 ataagactcatg-catgatgtgtacctagaccgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacttatatctagaccgtcaaaggtct 269715  T
Q  166 ctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||| ||||||| |||||||||||| |  ||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||    
T  269716 ctgcaaggccggagcccacaaatctagatcaccaaagatctctgcaagaccgaagtccac-aaactagatcactaaatgatctctgcta 269803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 720859 - 721043
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||||||||| ||| | |||||  ||||||||||||| |||||  |||||||||    
T  720859 ataagactcgtgacatgatatgcacctagttcgacacatatatgcatgtggtaccaaatctcttcaagaacgtcacctatatctagaccaccaaaggtct 720958  T
Q  166 ctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||| |||||  |||| ||||||||| ||| | ||||||||||    
T  720959 ctgcaaggccgaagcccacaatctagatcactaatgatctctgcaaggccgaaacccac-aaactagatcactaattgatctctgc 721043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 36892478 - 36892282
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||| ||| |||||||| |  ||||||||||||||||||||    
T  36892478 atcaattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcaagatatgcacctatt--gacacatatatgcatgtggt 36892384  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| |||||||||||||||||||||  |||||||||  ||| |||||||||||| |||||| |||||| ||||||||| |  ||||||| |||| ||||    
T  36892383 accaaatcacctcaaggtcgtcacctgaatccagaccaccaagggtctctgcaagaccgaagtccacaaactagatcacaaatgatctctgcaaggccga 36892284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 25877736 - 25877543
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||| ||||||| |||||||| |  ||||||||||||||||||||    
T  25877736 atcaattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatatcatgatatgcacctatt--gacacatatatgcatgtggt 25877642  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccg 216  Q
    |||| ||| |||||||||||||||||  |||||||||  ||| |||||||||||| |||||| |||||| ||||||| | |  ||||||| ||||||||    
T  25877641 accaaatctcctcaaggtcgtcaccttaatccagaccaccaagggtctctgcaagaccgaagtccacaaactagatctcaaaagatctctgcaagaccg 25877543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 24089046 - 24088972
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtca 140  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24089046 ataagactcgtgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtca 24088972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 19435143 - 19435066
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  19435143 ataagactcatgtcatgatatgcacctagttcgacacatatatgcatgtggtatcaaatcacctcaaggtcgtcacct 19435066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 6877887 - 6878009
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    ||||||||||||| |||||||||||||||||||||||||  ||| || | ||||||||||||||||||| ||||| ||  | |||||||| |||||| ||    
T  6877887 acatcaattcacaattattcatacacaatcaccaatcac--att-tccaaataagactcatgtcatgatatgcactta--ttgacacataaatgcatttg 6877981  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||  |||||||||| ||||||||||    
T  6877982 gtaccggatcacctcaaagtcgtcacct 6878009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 25600452 - 25600527
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||| |||||||||||| |||||||| |  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  25600452 ataagattcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccatattacctcaaggtcgtcacct 25600527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 43641336 - 43641393
Alignment:
Q  86 tgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43641336 tgcacctagttcgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 43641393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 22861934 - 22862054
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| |||||||||||||||| | ||| ||| |||||| |||||||||||| ||||| || |  |||||||| |||||||||||    
T  22861934 atcaattcacaaatattcattcacaatcaccaatcac-acttc-caa-ataagaatcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 22862028  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    || | |||||||||||||||||||||    
T  22862029 acgagatcacctcaaggtcgtcacct 22862054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 43644679 - 43644559
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||| || || |||  ||||||||||||||||||| ||||||||  | ||| ||||||||||||||||    
T  43644679 atcaattcacaaatattcattcacaatcaccaatca-catttatca--ataagactcatgtcatgatatgcaccta--ttgacgcatatatgcatgtggt 43644585  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  ||| |||||||||    
T  43644584 accaaatctccaaaagatcgtcacct 43644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 19658470 - 19658516
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  19658470 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 19658516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 22137469 - 22137424
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22137469 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 22137424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 12643728 - 12643608
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||| |  ||||||||||||||||||||||||  |||  ||| ||| ||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  12643728 atcaattcagaaatattcatacacaatcaccaatcac--atttccaa-atatgactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 12643634  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| |  ||||||||||||||    
T  12643633 accaaatctcaacaaggtcgtcacct 12643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 18534350 - 18534395
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  18534350 cgacacatatatgcatgtggtaccaaatcacctcaacgtcgtcacc 18534395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 24272579 - 24272624
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  24272579 cgacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacc 24272624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 25600357 - 25600393
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  25600357 atcaattcacagttattcatacacaatcaccaatcac 25600393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 8886587 - 8886707
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||  ||||||||||||||||  ||  ||||  |||||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  8886587 atcaattcacaaatattcactcacaatcaccaatcacacata-tcaa--taagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 8886681  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  |||||||||||||    
T  8886682 accaaatctccaaaaggtcgtcacct 8886707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 12638038 - 12638003
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  12638038 atcaattcacagttattcatacacaatcaccaatca 12638003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 21276386 - 21276351
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  21276386 atcaattcacagttattcatacacaatcaccaatca 21276351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 22787669 - 22787583
Alignment:
Q  165 tctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||| |||||||||||||||||||| |||||||||| || |  | ||| |||| ||||||||| ||| ||||||||||||    
T  22787669 tctgcaaggccggagcccacaatctagatcactaatggatctctgcaggctcaaagcccac-aaactagatcactaaatgatctctgc 22787583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22273384 - 22273459
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  22273384 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 22273459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22282617 - 22282692
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  22282617 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 22282692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 4929 - 4884
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  4929 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 23823161 - 23823116
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  23823161 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 23823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 23825105 - 23825060
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  23825105 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 23825060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 23832240 - 23832195
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  23832240 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 23832195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 24296225 - 24296180
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  24296225 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 24296180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 25304090 - 25304135
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  25304090 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 25304135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 461162 - 461215
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  461162 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtacca 461215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 721037 - 721093
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaa 218  Q
    |||||||||||||||||||||||| |||||||||| || ||||||| |||| |||||    
T  721037 tctctgcaaggccgaagcccacaaactagatcactaattgatctctgcaaggccgaa 721093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 3801010 - 3800978
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||||||||||    
T  3801010 aattcacagttattcatacacaatcaccaatca 3800978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 9654564 - 9654511
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| ||||||||  | ||||||||||||||||||||||||    
T  9654564 ataagactcatggcatgatatgcaccta--tagacacatatatgcatgtggtacca 9654511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 12637824 - 12637747
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  12637824 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 12637747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 15631864 - 15631963
Alignment:
Q  40 acaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    ||||||||||||||| | || |||| ||||||||||||||||||| ||||| || |  ||| || | ||||||||||||||  |||||||| ||||||||    
T  15631864 acaatcaccaatcac-atttatcaa-ataagactcatgtcatgatatgcacttatt--gactcaaaaatgcatgtggtaccgaatcacctccaggtcgtc 15631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 21140374 - 21140451
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  21140374 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 21140451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 21276186 - 21276109
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  21276186 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 21276109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 24966571 - 24966607
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24966571 atcaattcacagttattcatacataatcaccaatcac 24966607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 42180253 - 42180217
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42180253 atcaattcacagctattcatacacaatcaccaatcac 42180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 12643856 - 12643821
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||| |||||||||||||||||    
T  12643856 atcaattcacagttattcgtacacaatcaccaatca 12643821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 25211136 - 25211171
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25211136 atcaattcacaattattcatacacaatcaccaatca 25211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 24828239 - 24828143
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||| ||||||    
T  24828239 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggttgtcacc 24828144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 24832691 - 24832595
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||| ||||||    
T  24832691 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggttgtcacc 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 19888437 - 19888360
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  19888437 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 19888360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 20629091 - 20629038
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    ||||||||| || |||||| |||||||| |  ||||||||||||||||||||||||    
T  20629091 ataagactcttgccatgatatgcacctatt--gacacatatatgcatgtggtacca 20629038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 20629186 - 20629150
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  20629186 atcaattcacaattattcattcacaatcaccaatcac 20629150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 24966713 - 24966766
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||| ||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  24966713 ataagattcatgccatgatatgcacctatt--gacacatatatgcatgtggtacca 24966766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 28543320 - 28543534
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaaca-taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||| ||||| |||||||| |||||||||||||||  |||| ||| || ||||||||||| ||||||||| ||||||  ||||||||||||||||||||    
T  28543320 atcaaatcacatttattcatgcacaatcaccaatca--aatt-tcaccaataagactcatg-catgatgtgtacctagaccgacacatatatgcatgtgg 28543415  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  28543416 taccatatcacctcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactaatggatctctgcaagacc 28543515  T
Q  216 gaagtccacaaaactagat 234  Q
    |||||||||||||||||||    
T  28543516 gaagtccacaaaactagat 28543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 17731239 - 17731007
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||||| ||||||||||| ||||||| | ||| | | ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17731239 catcaaatcacatttatttatacacaatcatcaatcac-atttcacca-ataagactcatgtcatgatatgcacctagttcgacacatatatgcatgtgg 17731142  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| |||||||||||||||||    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  17731141 taccatttcacttcaaggtcgtcacctat---tagaccttcaaaggcctctgcaaggccgaagcccacaatctagatcactaatggatctctgcaagacc 17731045  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  17731044 gaagtccacaaaactagatcactaaatgatctctgcta 17731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 20655793 - 20655566
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||    | |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  20655793 catcaattcacagttattcatacacaatcaccaatcaccaatcacatttcaaaacaagactcatgtcatgatgtgcacctagttcgacacatatatgcat 20655694  T
Q  113 gtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaa-tctagatcactatggatctctacaa 211  Q
    |||||||||||||||||              ||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||    
T  20655693 gtggtaccatatcacct--------------atatctagaccatcaaaggtctctgcaaggccggagcccacaaatctagatcactaaggatctctgcaa 20655608  T
Q  212 gaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||| |||||||||| ||| ||||||||| ||||    
T  20655607 gaccgaagtccataaaactagatcactaaatgatctcagcta 20655566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 65 - 250
Target Start/End: Original strand, 38532076 - 38532262
Alignment:
Q  65 cataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtc 164  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||  ||||||||    
T  38532076 cataagactcatgtcatgctgtacacctagttcgacacatatatgcatggggtaccatatcacttcaaggtcgtcacctatatctagaccaccaaaggtc 38532175  T
Q  165 tctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctg 250  Q
    | ||||||||||||||||| ||||| ||||||| |||||||||| ||||| |||||||||| ||||||||| ||| |||||||||||    
T  38532176 tttgcaaggccgaagcccaaaatctggatcactaatggatctctgcaagatcgaagtccaccaaactagatcactaaatgatctctg 38532262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 21679632 - 21679814
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||||||| | |||    
T  21679632 ataagactcatg-catgatgttcacctagcccgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatctctagaccgtcaaggatct 21679730  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctct 249  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  21679731 ctgcaaggccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcac-caatgatctct 21679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 25120939 - 25121097
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||| |||||    
T  25120939 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatatccagaccaccaagggtct 25121036  T
Q  166 ctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaa 226  Q
    |||||||||||||||||| || ||||||||| | |||||||| ||||||||||||||||||    
T  25121037 ctgcaaggccgaagcccaaaaactagatcacgaaggatctctgcaagaccgaagtccacaa 25121097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 19994875 - 19994716
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||  ||| |||||    
T  19994875 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatatcaagaccaccaagggtct 19994778  T
Q  166 ctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagaccgaagtccacaa 226  Q
    |||||| ||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  19994777 ctgcaaagcctgaagcccaaaatctagatcactaaggatctctgcaagaccgaagtccacaa 19994716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 18768497 - 18768355
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||| | |||||| ||||||||||||| |||||| ||||||||| |||| |||| ||||||||||||||| |||||  |||||||||    
T  18768497 ataagactcatgtcatgttatgcaccaagttcgacacatacatgcatatggtaccatttcacttcaaagtcgtcacctatatctagaccaacaaaggtct 18768398  T
Q  166 ctgcaaggccgaagcccacaatctagatcacta-tggatctct 207  Q
    || |||||||||||||||||||||||||||||| |||||||||    
T  18768397 ctacaaggccgaagcccacaatctagatcactattggatctct 18768355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 22737609 - 22737469
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||| |||| ||   |||||||||||||||||||| ||||| |  |||||||    
T  22737609 ataagactcatgtcatgaa-tgtacctagttcgacacatatatgcatgtggtgccatttcttttcaaggtcgtcacctatatctagaccat-taaggtct 22737512  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctct 207  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  22737511 ctgcaaggccgaagcccacaatctagatcactaatggatctct 22737469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 16416737 - 16416855
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||   |||||| |    
T  16416737 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcaaggtcatcacctaaatccagaccactaaaggttt 16416834  T
Q  166 ctgcaaggccgaagcccacaa 186  Q
     |||||| |||||| ||||||    
T  16416835 ttgcaagaccgaagtccacaa 16416855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 20480093 - 20480211
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||   || |||||    
T  20480093 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccgaatcacctcaatgtcgtcacctgaatccagaccactaagggtct 20480190  T
Q  166 ctgcaaggccgaagcccacaa 186  Q
    ||||||| |||||| ||||||    
T  20480191 ctgcaagaccgaagtccacaa 20480211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 22323174 - 22323049
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||| |||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||  ||| |||||    
T  22323174 ataaaactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtacca-atctcctcaaggtcgtcacccatatccagaccaccaagggtct 22323078  T
Q  166 ctgcaaggccgaagcccacaatctagatc 194  Q
    ||||||| ||||||  ||||| |||||||    
T  22323077 ctgcaagaccgaagttcacaaactagatc 22323049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 24719150 - 24719036
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |   |||| |||    
T  24719150 ataagactcatgtcatgatatgcacata--tcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatatccagatctcaaaagatct 24719053  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||| ||||||    
T  24719052 ctgccaggccaaagccc 24719036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 25294491 - 25294568
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  25294491 ataagactcatgtcatgatatgcatctagttcgacgcatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 25294568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 25756480 - 25756557
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  25756480 ataagactcatgtcatgatatgcatctagttcgacgcatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 25756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 24108365 - 24108204
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    ||||||||||||| ||||||| ||| |||||||||||||  ||| |||| ||| ||||||||||||||| ||||| || |  |||||||| |||||||||    
T  24108365 acatcaattcacaattattcacacataatcaccaatcac--attttcaa-atatgactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 24108271  T
Q  116 gtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||||| ||| ||  |||||||||||| ||||||||| |   |||| ||||||| ||||||||||||    
T  24108270 gtaccaaatctccaaaaggtcgtcacccatatccagatctcaaaagatctctgccaggccgaagccc 24108204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 37655323 - 37655243
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||   |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37655323 ataagactcatgtcaacatgatatgcacctagttcgacacatatatgcatgtggtgccaaatcacctcaaggtcgtcacct 37655243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 41244128 - 41244203
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||| |||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  41244128 ataagattcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 41244203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 20649049 - 20648981
Alignment:
Q  185 aatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  20649049 aatctagatcactaaggatctctgcaagaccgaagtccccaaaactagatcactaaatgatctctgcta 20648981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 37605432 - 37605552
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatg 113  Q
    |||||| |||| |||||||||||||||||||||||| ||||    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||||    
T  37605432 atcaatacacaattattcatacacaatcaccaatcatcaatcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgcatg 37605529  T
Q  114 tggtaccatatcacctcaaggtc 136  Q
    |||||||  ||||||||||||||    
T  37605530 tggtaccggatcacctcaaggtc 37605552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 16204041 - 16203921
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||||  ||  ||||  ||||||||||| |||||| |||||||| |  ||||||||||||||||||||    
T  16204041 atcaattcacaaatattcattcacaatcaccaatcacatata-tcaa--taagactcatgccatgatatgcacctatt--gacacatatatgcatgtggt 16203947  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  |||||||||||||    
T  16203946 accaaatctccaaaaggtcgtcacct 16203921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 22498948 - 22498901
Alignment:
Q  95 ttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22498948 ttcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 22498901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 22008212 - 22008098
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||| | ||||||| |   |||| |||    
T  22008212 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacccaaatccagatctcaaaagatct 22008115  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  22008114 ctgccaggccgaagccc 22008098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 33170785 - 33170830
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33170785 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 33170830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 23153485 - 23153407
Alignment:
Q  66 ataagactcatgtc--atgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||  ||||| ||| ||||   ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  23153485 ataagactcatgtctaatgatatgcgcctaaaccgacacatatatgcatgtggtaccaaatcacctcaagatcgtcacc 23153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 270240 - 270315
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| |||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||||||||||    
T  270240 ataaaactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcgtcacct 270315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 645680 - 645605
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| |||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||||||||||    
T  645680 ataaaactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcgtcacct 645605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 831415 - 831340
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| |||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||||||||||    
T  831415 ataaaactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcgtcacct 831340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 24238065 - 24238110
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  24238065 cgacacatatatgcatgtggtaccaaatcagctcaaggtcgtcacc 24238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 33612704 - 33612659
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  33612704 cgacatatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 33612659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 23116462 - 23116418
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  23116462 gacacatatatgcatgtggtaccaaatcacatcaaggtcgtcacc 23116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 41508971 - 41508935
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  41508971 atcaattcacagttattcatacacaatcaccaatcac 41508935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 13664367 - 13664255
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| |||  |  |||||||||||| | ||||||| |   |||| |||||    
T  13664367 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatcttcaaaaggtcgtcacccaaatccagatctcaaaagatctct 13664270  T
Q  168 gcaaggccgaagccc 182  Q
    || ||||||||||||    
T  13664269 gccaggccgaagccc 13664255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 13664594 - 13664559
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  13664594 atcaattcacagttattcatacacaatcaccaatca 13664559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 13723642 - 13723530
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| |||  |  |||||||||||| | ||||||| |   |||| |||||    
T  13723642 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatcttcaaaaggtcgtcacccaaatccagatctcaaaagatctct 13723545  T
Q  168 gcaaggccgaagccc 182  Q
    || ||||||||||||    
T  13723544 gccaggccgaagccc 13723530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 13723869 - 13723834
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  13723869 atcaattcacagttattcatacacaatcaccaatca 13723834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 22909386 - 22909351
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  22909386 atcaattcacagttattcatacacaatcaccaatca 22909351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 23509217 - 23509252
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  23509217 atcaattcacagttattcatacacaatcaccaatca 23509252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 24108509 - 24108474
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  24108509 atcaattcacagttattcatacacaatcaccaatca 24108474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 24930775 - 24930700
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  24930775 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 24930700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 21696082 - 21696127
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  21696082 gacacataaatgcatgtggtaccggatcacctcaaggtcgtcacct 21696127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 22312190 - 22312235
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||    
T  22312190 cgacacatatatgcatgtggtaccaaatcacctcaaagtcatcacc 22312235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 24547703 - 24547799
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  24547703 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacc 24547798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 39448464 - 39448419
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  39448464 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 39448419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 45560861 - 45560816
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||    
T  45560861 cgacacatacatgcatgtggtaacaaatcacctcaaggtcgtcacc 45560816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 3433422 - 3433390
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||||||||||    
T  3433422 aattcacagttattcatacacaatcaccaatca 3433390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 18610577 - 18610613
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18610577 atcaattcacagctattcatacacaatcaccaatcac 18610613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 22323269 - 22323233
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22323269 atcaattcacaattattcatacacaatcaccaatcac 22323233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 22909215 - 22909103
Alignment:
Q  70 gactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct--atatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||  | ||||||| |   |||| |||||    
T  22909215 gactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccaaatccagatctcaaaagatctct 22909118  T
Q  168 gcaaggccgaagccc 182  Q
    || ||||||||||||    
T  22909117 gccaggccgaagccc 22909103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 23509416 - 23509493
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  23509416 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 23509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 43375259 - 43375206
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  43375259 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtacca 43375206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 28836223 - 28836258
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  28836223 atcaattcacagttattcatacacgatcaccaatca 28836258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 29758792 - 29758867
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||| ||| ||||||||||||||| ||| ||  |||||||||||||    
T  29758792 ataagactcatgtcatgatatgcacttatt--gacatataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 29758867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 21192388 - 21192343
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  ||||||| |||||||||||||    
T  21192388 gacacataaatgcatgtggtaccgaatcaccttaaggtcgtcacct 21192343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 16041421 - 16041385
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  16041421 atcaattcacagttattcatacacaattacccatcac 16041385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 16043097 - 16043061
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  16043097 atcaattcacagttattcatacacaattacccatcac 16043061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 21199814 - 21199770
Alignment:
Q  99 acacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||| ||||||||||||||  ||||||||||| |||||||||    
T  21199814 acacataaatgcatgtggtaccgaatcacctcaagctcgtcacct 21199770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 24387367 - 24387314
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    ||||||||||||||||||| ||||| ||  | |||||||| |||||||||||||||    
T  24387367 ataagactcatgtcatgatatgcactta--ttgacacataaatgcatgtggtacca 24387314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 24719367 - 24719331
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||| |||||| |||||||||||||||||||||||||    
T  24719367 atcacttcacaattattcatacacaatcaccaatcac 24719331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 31195917 - 31195881
Alignment:
Q  107 atgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  31195917 atgcatgtggtaccaaatcaccttaaggtcgtcacct 31195881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 23453332 - 23453567
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||||| || |||||||| ||||||| | ||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23453332 catcaaatcacaattatttatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgaacctagttcgacacatatatgcatgtgg 23453429  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||||||| |||||||||||||| |||||||| | |||||||    
T  23453430 taccatatcacctcaaggtcgtcacctatatctagaccattaatggtccctgcaaggccgaagcccgcaatctagatcactaatggatctttgcaagacc 23453529  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  23453530 gaagtccacaaaactagatcactaaatgatctctgcta 23453567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 23460576 - 23460811
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||||| || |||||||| ||||||| | ||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23460576 catcaaatcacaattatttatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgaacctagttcgacacatatatgcatgtgg 23460673  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||||||| |||||||||||||| |||||||| | |||||||    
T  23460674 taccatatcacctcaaggtcgtcacctatatctagaccattaatggtccctgcaaggccgaagcccgcaatctagatcactaatggatctttgcaagacc 23460773  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  23460774 gaagtccacaaaactagatcactaaatgatctctgcta 23460811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 23464837 - 23465072
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||||| || |||||||| ||||||| | ||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23464837 catcaaatcacaattatttatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgaacctagttcgacacatatatgcatgtgg 23464934  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||||||| |||||||||||||| |||||||| | |||||||    
T  23464935 taccatatcacctcaaggtcgtcacctatatctagaccattaatggtccctgcaaggccgaagcccgcaatctagatcactaatggatctttgcaagacc 23465034  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  23465035 gaagtccacaaaactagatcactaaatgatctctgcta 23465072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 24184983 - 24184756
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    |||||||||||||||||||||||||||||||  | | |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  24184983 tcacagttattcatacacaatcaccaatcac--act-tcaaaacaagactcatgtcatgatgtgcacctagtccgacacatatatgcatgtggtaccatt 24184887  T
Q  124 tcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtcc 222  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  |||||||  ||||||| |||||||||||||| |||||||| |||||||||| |||    
T  24184886 tcacttcaaggtcgtcacctatatctagaccgccaaaggtctcgacaaggccagagcccacaaatctagatcactaaggatctctgcaagaccgaaatcc 24184787  T
Q  223 acaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||| ||| ||||||||||||||    
T  24184786 acaaaactagatcactaaatgatctctgcta 24184756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 3672422 - 3672607
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||||| ||||||||||    
T  3672422 ataagactcatgtcttgatatgcatctagttcgacacatatatgcatgtggtaccaactcacttcaaggtcgtcacctatatctagaccatcaaaggtct 3672521  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgc 251  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| |||||| |||| ||||||||| ||| ||||||||||||    
T  3672522 ctgcaaggccgaagcccacaatctagatcactaatggatctctgcaaggccgaagcccac-aaactagatcactaaatgatctctgc 3672607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 19404011 - 19404194
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  19404011 ataagactcatg-catgaagtgcacctagcccgacacatatatgcatgtggtaccatttcacttcaaggttgtcacctatatctagaccgtcaaaggtct 19404109  T
Q  166 ctgcaaggccgaagcccacaatctagatca-ctatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctg 250  Q
    |||||||| ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  19404110 ctgcaaggtcgaagcccacaatctagatcaccaatggatctctgcaagaccgaagtccacaaaactagatcac-caatgatctctg 19404194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 11338634 - 11338408
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    ||||| |||||||| ||||||||||||||||  ||| |||| |||||||||||| ||||||||| |||||   |||||| ||||||||||| ||||||||    
T  11338634 tcacatttattcatgcacaatcaccaatcac--att-tcaaaataagactcatg-catgatgtgtacctaacccgacacgtatatgcatgttgtaccata 11338539  T
Q  124 tcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtcc 222  Q
    |||   |||||||||||| |||||| |||||||||||||||||||||||| || ||||||| |||||||||||||| |||||| | ||||||||||||||    
T  11338538 tcattccaaggtcgtcacttatatctagaccgtcaaaggtctctgcaaggacggagcccacaaatctagatcactaaggatctatgcaagaccgaagtcc 11338439  T
Q  223 acaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||| ||| ||||||||||||||    
T  11338438 acaaaactagatcactaaatgatctctgcta 11338408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 30 - 253
Target Start/End: Original strand, 21392592 - 21392808
Alignment:
Q  30 ttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacct 129  Q
    ||||||||||||||||||||| |||  ||  ||||  |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||| ||    
T  21392592 ttattcatacacaatcaccaaacacatata-tcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcaact 21392686  T
Q  130 caaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaac 229  Q
    ||||||||||||| |||||||||||  ||| |||||||||||||| |||| |||||| ||||||||||| |||||||| |||||| ||||||||| ||||    
T  21392687 caaggtcgtcaccgatatccagaccaccaagggtctctgcaaggctgaagtccacaaactagatcactaaggatctctgcaagactgaagtccac-aaac 21392785  T
Q  230 tagattactcaatgatctctgcta 253  Q
    ||||| ||| ||||||||||||||    
T  21392786 tagatcact-aatgatctctgcta 21392808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 5452510 - 5452375
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaagg 162  Q
    |||||||||||||||   |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||  ||||||    
T  5452510 ataagactcatgtcaacatgatatgcacctagttcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacatttatctagaccaccaaagg 5452411  T
Q  163 tctctgcaaggccgaagcccacaatctagatcacta 198  Q
    ||||| |||||||||||||||||| |||||||||||    
T  5452410 tctctacaaggccgaagcccacaaactagatcacta 5452375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 21653125 - 21652999
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||| ||||||||| ||||| ||  ||||| |||||||||||||||||||| ||  |||||||||||||||| |||||||||||  ||| |||||    
T  21653125 ataagactcgtgtcatgatatgcactta--tcgacgcatatatgcatgtggtaccaaatgtcctcaaggtcgtcacccatatccagaccaccaagggtct 21653028  T
Q  166 ctgcaaggccgaagcccacaatctagatc 194  Q
    ||||||| |||||| |||||| |||||||    
T  21653027 ctgcaagaccgaagtccacaaactagatc 21652999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 28258021 - 28258146
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||| |||||||||||||| |||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||  ||| | |||    
T  28258021 ataaaactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtacca-atctcctcaaggtcgtcacccatatccagaccaccaaggatct 28258117  T
Q  166 ctgcaaggccgaagcccacaatctagatc 194  Q
    ||||||| |||||| |||||| |||||||    
T  28258118 ctgcaagaccgaagtccacaaactagatc 28258146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 11582296 - 11582455
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||||||||||||| ||||||||  || | ||||  ||||||||||| |||||| |||||||| |  |||||||||||||||||||    
T  11582296 atcaattcacagttattcatacacaatctccaatcac--atacatcaa--taagactcatgccatgatatgcacctatt--gacacatatatgcatgtgg 11582389  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||||| |||| |||| |||||||||| ||||||||| |   |||| ||||||| | ||||||||||    
T  11582390 taccaaatcatctcagggtcgtcacccatatccagatctcaaaagatctctgccaagccgaagccc 11582455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 21661443 - 21661316
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatg 113  Q
    ||||||||||| ||||||||||||||||||||||||||| |    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||||    
T  21661443 atcaattcacaattattcatacacaatcaccaatcaccattcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgcatg 21661346  T
Q  114 tggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||  |||||||||||||||||||||    
T  21661345 tggtaccggatcacctcaaggtcgtcacct 21661316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 1170439 - 1170280
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||||  ||  ||||  |||||||||||||||||| | |||||| |  || |||||||||||||||||    
T  1170439 atcaattcacaaatattcattcacaatcaccaatcacatata-tcaa--taagactcatgtcatgatattcacctatt--gatacatatatgcatgtggt 1170345  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||| ||| |||||||||||||||| ||||| ||| |   |||| ||||||| ||||||||||||    
T  1170344 accaaatctcctcaaggtcgtcacccatatctagatctcaaaagatctctgccaggccgaagccc 1170280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 24470732 - 24470845
Alignment:
Q  67 taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctc 166  Q
    |||||||||||||||||| |||||||| |  ||| |||||||||||||||||||| ||| |||||||||||||||| || |||||| |   |||| ||||    
T  24470732 taagactcatgtcatgatatgcacctatt--gacccatatatgcatgtggtaccaaatctcctcaaggtcgtcacccatgtccagatctcaaaagatctc 24470829  T
Q  167 tgcaaggccgaagccc 182  Q
    ||| ||||||||||||    
T  24470830 tgccaggccgaagccc 24470845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 21615502 - 21615582
Alignment:
Q  66 ataagactcatgtcatgatg---tgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||  |||   ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21615502 ataagactcatgtcaacatgaaatgcgcctagttcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 21615582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 24227145 - 24227065
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  24227145 ataagactcatgtcaacatgatatgcacctagttcgacacatatatgcatgtcgtaccgaatcacctcaaggtcgtcacct 24227065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 27185551 - 27185426
Alignment:
Q  20 caattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    ||||||||| ||||||| ||||||| | |||||||||||    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||||||    
T  27185551 caattcacatttattcagacacaattatcaatcaccaatcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 27185454  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||  |||||||||||||||||||||    
T  27185453 gtaccggatcacctcaaggtcgtcacct 27185426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 19860723 - 19860803
Alignment:
Q  66 ataagactcatgtcatgatg---tgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||  |||   ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  19860723 ataagactcatgtcaacatgaaatgcgcctagttcgacacatatatgcatgtggtaccaaatcaccccaaggtcgtcacct 19860803  T

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Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 4863706 - 4863835
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat------tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatg 109  Q
    |||||||  |||| |||||||||||||||||||||||||||||      | ||||  |||||||||||||||||| ||||| || |  ||| |||| |||    
T  4863706 acatcaaagcacaattattcatacacaatcaccaatcaccaatcacatttatcaa--taagactcatgtcatgatatgcacttatt--gacgcataaatg 4863801  T
Q  110 catgtggtaccatatcacctcaaggtcgtcacct 143  Q
     ||||||||||| |||||||||||||||||||||    
T  4863802 aatgtggtaccaaatcacctcaaggtcgtcacct 4863835  T

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Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 17473625 - 17473509
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaa--ggtcgtcacctatatccagaccgtcaaaggt 163  Q
    |||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| ||| ||  ||  |||||||||| | ||||||| |   |||| |    
T  17473625 ataagactcatgccatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatctccaaaaagggtcgtcacccaaatccagatctcaaaagat 17473528  T
Q  164 ctctgcaaggccgaagccc 182  Q
    |||||| ||||||||||||    
T  17473527 ctctgccaggccgaagccc 17473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 22885005 - 22884885
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||| ||||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  22885005 atcaattcacaaatattcattcacaatctccaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 22884911  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| |  ||||||||||||||    
T  22884910 accaaatctcaacaaggtcgtcacct 22884885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 23510370 - 23510530
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||| || || || ||||||||||||||| ||||| ||||| ||  | |||||||| |||||||| ||    
T  23510370 atcaattcacaaatattcattcacaatcaccaatca-catttatc-acataagactcatgttatgatatgcactta--ttgacacataaatgcatgttgt 23510465  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||| ||| ||  |||||  ||||| ||||||||| |   |||| ||| ||| ||||||||||||    
T  23510466 accaaatctccaaaaggttatcacccatatccagatctcaaaagatctatgccaggccgaagccc 23510530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 10779980 - 10779881
Alignment:
Q  40 acaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    ||||||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||    
T  10779980 acaatcaccaatcacaaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtc 10779885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 34937720 - 34937756
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  34937720 atcaattcacagttattcatacacaatcaccaatcac 34937756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 10456 - 10491
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  10456 atcaattcacagttattcatacacaatcaccaatca 10491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 10584 - 10619
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  10584 atcaattcacagttattcatacacaatcaccaatca 10619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 1221682 - 1221647
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  1221682 atcaattcacagttattcatacacaatcaccaatca 1221647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 9732636 - 9732601
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  9732636 atcaattcacagttattcatacacaatcaccaatca 9732601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 17473745 - 17473710
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  17473745 atcaattcacagttattcatacacaatcaccaatca 17473710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 19498085 - 19498120
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  19498085 atcaattcacagttattcatacacaatcaccaatca 19498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 43445752 - 43445717
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  43445752 atcaattcacagttattcatacacaatcaccaatca 43445717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 11964472 - 11964518
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  11964472 cgacacatacatgcatgtggtaccaaaccacctcaaggtcgtcacct 11964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 35792907 - 35792832
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  35792907 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 35792832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 110760 - 110686
Alignment:
Q  67 taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  110760 taagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 110686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 13793655 - 13793700
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  13793655 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 13793700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 20455741 - 20455700
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgt 138  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  20455741 cgacacatatatgcatgtggtaccaaatcacctcaagatcgt 20455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 23492528 - 23492573
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  23492528 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 23492573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 11340895 - 11340927
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||||||||||    
T  11340895 aattcacagttattcatacacaatcaccaatca 11340927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 19498299 - 19498376
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  19498299 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 19498376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 22368263 - 22368186
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  22368263 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 22368186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 25211716 - 25211623
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgt 114  Q
    ||||||||||||| ||||||| ||| |||||||||||||  ||| |||| ||| ||||||||||||||| ||||| ||  | |||||||| ||||||||    
T  25211716 acatcaattcacaattattcacacataatcaccaatcac--attttcaa-atatgactcatgtcatgatatgcactta--ttgacacataaatgcatgt 25211623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 25275868 - 25275775
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgt 114  Q
    ||||||||||||| ||||||| ||| |||||||||||||  ||| |||| ||| ||||||||||||||| ||||| ||  | |||||||| ||||||||    
T  25275868 acatcaattcacaattattcacacataatcaccaatcac--attttcaa-atatgactcatgtcatgatatgcactta--ttgacacataaatgcatgt 25275775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 28257926 - 28257962
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||||||||||||||||||||    
T  28257926 atcaattcacaattattcatacacaatcaccaatcac 28257962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 110932 - 110897
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||| ||||||||||||||||||||||||||||    
T  110932 atcaattaacagttattcatacacaatcaccaatca 110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 10780156 - 10780121
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10780156 atcaattcacagtcattcatacacaatcaccaatca 10780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 22368381 - 22368346
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22368381 atcaattaacagttattcatacacaatcaccaatca 22368346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 22885085 - 22885050
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||| |||||||||    
T  22885085 atcaattcacagttattcatacacaaccaccaatca 22885050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 29192611 - 29192576
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29192611 atcaattcacagttattcatacacaatcaccgatca 29192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 18779847 - 18779732
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacc-tcaaggtcgtcacctatatccagaccgtcaaaggtc 164  Q
    ||||||||||||||||||| ||||| ||  | |||||||| ||||||||||||||| ||| ||   |||||| ||||| | ||||||| |   |||| ||    
T  18779847 ataagactcatgtcatgatatgcactta--ttgacacataaatgcatgtggtaccaaatctccaaaaaggtcatcacccaaatccagatctcaaaagatc 18779750  T
Q  165 tctgcaaggccgaagccc 182  Q
    ||||| ||||||||||||    
T  18779749 tctgccaggccgaagccc 18779732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 7727103 - 7727148
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||| || ||||||||||||||  |||||||||||||||||||||    
T  7727103 gacacgtaaatgcatgtggtaccgaatcacctcaaggtcgtcacct 7727148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 32967811 - 32967770
Alignment:
Q  102 catatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  32967811 cataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 32967770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 37189771 - 37189726
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  37189771 gacacataaatgcaagtggtaccgaatcacctcaaggtcgtcacct 37189726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 10850 - 10927
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  10850 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 10927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 9732445 - 9732368
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |   ||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  9732445 acataagactcatgttatgatatgcacttatta--acacatagatgcatgtggtaccaaatctcaacaaggtcgtcacct 9732368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19498212 - 19498252
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat 58  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  19498212 atcaattcacaaatattcattcacaatcaccaatcaccaat 19498252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25211834 - 25211798
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  25211834 atcaattcacatttattcatacagaatcaccaatcac 25211798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25275986 - 25275950
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  25275986 atcaattcacatttattcatacagaatcaccaatcac 25275950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 25425121 - 25425198
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  25425121 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 25425198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 29192396 - 29192319
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  29192396 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 29192319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 43445536 - 43445459
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| |||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  43445536 acataagattcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 43445459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 4232 - 4460
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    ||||||||||||||||||||||||||||||| |||||  ||||  ||||||||||||||||||||||||||  |||||||||||| |||||||||||||     
T  4232 tcacagttattcatacacaatcaccaatcac-aattcaaaaca--agactcatgtcatgatgtgcacctagcccgacacatatatacatgtggtaccatt 4328  T
Q  124 tcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtcc 222  Q
    |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||| |||||||    
T  4329 tcacttcaaggtcgtcacctatatctagaccatcaaatgtctctgcaaggccggagcccacaaatctagattactaaggatctctacaagactgaagtcc 4428  T
Q  223 acaaaactagattactcaatgatctctgctac 254  Q
    ||||| |||||| ||| ||||||| |||||||    
T  4429 acaaatctagatcactaaatgatccctgctac 4460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 2509 - 2474
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2509 atcaattcacagttattcatacacaattaccaatca 2474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 22866603 - 22866790
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||||||||||||||| ||||||||||||||||    
T  22866603 ataagactcatg-catgatgtgcacctagcccgacacatatatgcatgtgatactatttcacttcaaggtcgtcacctatatctagaccgtcaaaggtct 22866701  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  22866702 ctgcaaggccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 22866790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 28196514 - 28196326
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| |||||| ||| |||||    
T  28196514 ataagactcatgtcatgatgtgcacctagttcgacacttatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccgccaagggtct 28196415  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    || ||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  28196414 ctacaaggccgacgcctacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 28196326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 18397360 - 18397547
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| | ||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||    
T  18397360 ataagactcatg-catgatgtgtatctagaccggcacttatatgcatgtggtaccatatcacctcaaggtcgtcacctatatctagaccatcaaaggcct 18397458  T
Q  166 ctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  18397459 ctgcaaggccgaaggccacaaatctagatcactaaggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 18397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 24 - 251
Target Start/End: Complemental strand, 25369129 - 25368905
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    ||||| |||||||| |||||||| ||||||| | ||| | | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  25369129 tcacatttattcatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgcacctagttcgacgcatatatgcatgtggtaccatt 25369032  T
Q  124 tcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtcc 222  Q
    |||| |||||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||| |||||||||| || |  | ||| ||    
T  25369031 tcacttcaaggtcgtcacctatatctagacc-accaaggtctctgcaaggccgaagcccacaatctagatcactaatggatctctgcagggtctaagccc 25368933  T
Q  223 acaaaactagattactcaatgatctctgc 251  Q
    || ||||||||| ||| ||||||||||||    
T  25368932 ac-aaactagatcactaaatgatctctgc 25368905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 13016556 - 13016350
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||  ||||  ||||     |||||||||||| ||||||||| |  |||  ||||||| |||||||||||||    
T  13016556 atcaattcacaattattcatacacaatcacctgtcac--attcaatcgataagactcatg-catgatgtgtatatagaccgacacaaatatgcatgtggt 13016460  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccg 216  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  13016459 accatatcatctcaaggtcgtcacctaaatctagaccgtcaaaggtctctgcaaggccgaagcccacaaatctagatcactaaggatctctgcaagaccg 13016360  T
Q  217 aagtccacaa 226  Q
    ||||||||||    
T  13016359 aagtccacaa 13016350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 18422185 - 18422390
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    ||||||||||| |||||||||||||||||||||||||  || | ||||  |||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  18422185 atcaattcacaattattcatacacaatcaccaatcac--atacatcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtgg 18422278  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagacc 215  Q
    ||||| |||||||||||||||||||| |||||||||||  ||| ||||||||||||||| |||||||| |||||| ||||||| ||||||||  |||||     
T  18422279 taccaaatcacctcaaggtcgtcacccatatccagaccaccaagggtctctgcaaggcctgaagcccaaaatctatatcactaaggatctctgtaagact 18422378  T
Q  216 gaagtccacaaa 227  Q
    ||||||| ||||    
T  18422379 gaagtccgcaaa 18422390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 25646636 - 25646432
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat-tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||  |||||| ||||||||||||||||  ||| | ||||  |||||||||||||||||| |||||||| |  |||||||||||||||||||    
T  25646636 atcaattcacaactattcacacacaatcaccaatca--aatatatcaa--taagactcatgtcatgatatgcacctatt--gacacatatatgcatgtgg 25646543  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccg 216  Q
    ||||| ||| |||||||||||||||| |||||||||||  ||| ||||||| |||| |||||| |||||| ||||||| | |  ||||||| ||||||||    
T  25646542 taccaaatctcctcaaggtcgtcacccatatccagaccaccaagggtctctacaagaccgaagtccacaaactagatctcaaaagatctctgcaagaccg 25646443  T
Q  217 aagtccacaaa 227  Q
    |||||||||||    
T  25646442 aagtccacaaa 25646432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 15738687 - 15738823
Alignment:
Q  71 actcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgca 170  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||| |||||  |||||||| |||||    
T  15738687 actcatgtcatcatatgcacctagttcgacacatacatgcatgtggtaccaaatcacttcaacgtcgtcacctatatctagaccaccaaaggtccctgca 15738786  T
Q  171 aggccgaagcccacaatctagatcact-atggatctct 207  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  15738787 aggccgaag-ccacaatctagatcactaatggatctct 15738823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 32897258 - 32897344
Alignment:
Q  165 tctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  32897258 tctgcaaggccgaagcccacaatctagatcactatggatctctgcaagaccgaagtccac-aaactagatcac-caatgatctctgcta 32897344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 22428625 - 22428746
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||| ||||| ||  | |||||||| ||||||||||    
T  22428625 catcaattcatagttattcatacacaatcaccaatcac--att-tcaaaacaagactcatgtcatgatatgcactta--ttgacacataaatgcatgtgg 22428719  T
Q  117 taccatatcacctcaaggtcgtcacct 143  Q
    ||||  |||||||||||||||||||||    
T  22428720 taccggatcacctcaaggtcgtcacct 22428746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 31626892 - 31627009
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacc 120  Q
    |||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||||||| ||||||||  | |||||||| ||||||||||||||    
T  31626892 aattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcaccta--tagacacatacatgcatgtggtacc 31626986  T
Q  121 atatcacctcaaggtcgtcacct 143  Q
    | |||||||||||||||||||||    
T  31626987 aaatcacctcaaggtcgtcacct 31627009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 25746025 - 25745897
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    |||||||| |||| |||||||||||||||||||||||||||||    | || | ||||||||||||||||||| ||||  || |  |||||||| || ||    
T  25746025 acatcaatgcacaattattcatacacaatcaccaatcaccaatcacatttccaaataagactcatgtcatgatatgcagttatt--gacacataaattca 25745928  T
Q  112 tgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||| ||||||||||||||||||||    
T  25745927 tgtggtaccaaatcacctcaaggtcgtcacc 25745897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 18825547 - 18825379
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat-----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgc 110  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||     | |||| ||| ||||||||||||||| ||||| || |  |||||||| ||||    
T  18825547 acatcaattcacaattattcacacataatcaccaatcaccaatcacattttcaa-atatgactcatgtcatgatatgcacttatt--gacacataaatgc 18825451  T
Q  111 atgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||||||||||| ||| ||  |||||||||||| ||||||||| |   |||| ||||||| ||||||||||||    
T  18825450 atgtggtaccaaatctccaaaaggtcgtcacccatatccagatctcaaaagatctctgccaggccgaagccc 18825379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 35017376 - 35017261
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtc--aaaggt 163  Q
    ||||||||||||||||||| ||||| || |  |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| | ||  |||| |    
T  35017376 ataagactcatgtcatgatatgcacatatt--gacacatatatgcatgtggtaccaaatcacctcagggtcgtcacccatatccagatc-tcaaaaagat 35017280  T
Q  164 ctctgcaaggccgaagccc 182  Q
    |||||| ||||||||||||    
T  35017279 ctctgccaggccgaagccc 35017261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 18775655 - 18775782
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcacca-----attctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcat 112  Q
    ||||||||||| |||||||||||||||||||||||||||     ||| |||| |||||||| |||||||||| ||||| ||  | |||||||| ||||||    
T  18775655 atcaattcacaattattcatacacaatcaccaatcaccattcacattttcaa-ataagacttatgtcatgatatgcactta--ttgacacataaatgcat 18775751  T
Q  113 gtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||  |||||||||| ||||||||||    
T  18775752 gtggtaccggatcacctcaaagtcgtcacct 18775782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22846616 - 22846696
Alignment:
Q  66 ataagactcatgtca---tgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  22846616 ataagactcatgtcaacatgatatgcacctagttcgacacatatatgcatgtagtaccaaatcaccgcaaggtcgtcacct 22846696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 18843608 - 18843440
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat-----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgc 110  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||     | |||| ||| ||| ||||||||||| ||||| || |  |||||||| ||||    
T  18843608 acatcaattcacaattattcacacataatcaccaatcaccaatcacattttcaa-atatgacgcatgtcatgatatgcacttatt--gacacataaatgc 18843512  T
Q  111 atgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||||||||||| ||| ||  |||||||||||| ||||||||| |   |||| ||||||| ||||||||||||    
T  18843511 atgtggtaccaaatctccaaaaggtcgtcacccatatccagatctcaaaagatctctgccaggccgaagccc 18843440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 18004732 - 18004594
Alignment:
Q  40 acaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtc 139  Q
    ||||||||||||||| | ||||||| | ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||    
T  18004732 acaatcaccaatcac-atttctcaa-acaagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtc 18004637  T
Q  140 acctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||| | ||||||| |   |||| ||||||| ||||||||||||    
T  18004636 acccaaatccagatctcaaaagatctctgccaggccgaagccc 18004594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 32896421 - 32896492
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcac 90  Q
    |||||||||||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||||| |||||    
T  32896421 acatcaattcacagttattcatacacaatcaccaatcac--att-tctaaataagactcatgtcatgatatgcac 32896492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 34965470 - 34965516
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  34965470 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 34965516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 19852795 - 19852840
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  19852795 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 19852840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 16105004 - 16105129
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaat-----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||||| ||||||||||||||||||||||||||| |||     |  ||| | ||||||||||||||||| || || || |  |||||||| |||||||||    
T  16105004 aattcatagttattcatacacaatcaccaatcactaatcacatttccaaaacaagactcatgtcatgatatgtacttatt--gacacataaatgcatgtg 16105101  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||  || ||||||||||||||||||    
T  16105102 gtaccggataacctcaaggtcgtcacct 16105129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 18740878 - 18740994
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaa--ggtcgtcacctatatccagaccgtcaaaggt 163  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||||||||||||| ||| ||  ||  |||||||||| | ||||||| |   |||| |    
T  18740878 ataagactcatgtcatgatatgcaccta--tagacacatatatgcatgtggtaccaaatctccaaaaagggtcgtcacccaaatccagatctcaaaagat 18740975  T
Q  164 ctctgcaaggccgaagccc 182  Q
    ||||| |||||||||||||    
T  18740976 ctctgaaaggccgaagccc 18740994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 23220222 - 23220263
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgt 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  23220222 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgt 23220263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 14628412 - 14628376
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  14628412 atcaattcacagttattcatacacaatcaccaatcac 14628376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 16238727 - 16238763
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  16238727 atcaattcacagttattcatacacaatcaccaatcac 16238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 35011167 - 35011131
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  35011167 atcaattcacagttattcatacacaatcaccaatcac 35011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 18578983 - 18579018
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  18578983 atcaattcacagttattcatacacaatcaccaatca 18579018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 18843752 - 18843717
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  18843752 atcaattcacagttattcatacacaatcaccaatca 18843717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 21930417 - 21930464
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctc-aaggtcgtcacct 143  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  21930417 cgacacatatatgcatgtggtaccaaatcacctcaaaggtcgtcacct 21930464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 23975858 - 23975893
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  23975858 atcaattcacagttattcatacacaatcaccaatca 23975893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 33316457 - 33316422
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  33316457 atcaattcacagttattcatacacaatcaccaatca 33316422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 1659366 - 1659291
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  1659366 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 1659291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 18128776 - 18128851
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||| ||| ||||||||||||||| |||||||| || |||||||||    
T  18128776 ataagactcatgtcatgatatgcacttatt--gacatataaatgcatgtggtaccaaatcacctccagttcgtcacct 18128851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 1651626 - 1651530
Alignment:
Q  43 atcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||||||| |||| ||| |||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  1651626 atcaccaatcacgaatt-tca-cataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacc 1651531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 4989403 - 4989477
Alignment:
Q  67 taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  4989403 taagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 4989477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 7828883 - 7828830
Alignment:
Q  200 ggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  7828883 ggatctctgcaagaccgaagtccataaaactagatcactaaataatctctgcta 7828830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 18383327 - 18383282
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  18383327 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 18383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 13622857 - 13622804
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  13622857 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtacca 13622804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 13622975 - 13622939
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13622975 atcaattcacagttattcatacataatcaccaatcac 13622939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 14628266 - 14628193
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  14628266 aagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 14628193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 23976072 - 23976149
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  23976072 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 23976149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 33316241 - 33316164
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  33316241 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 33316164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 35017495 - 35017459
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35017495 atcaattcacaattattcatacacaatcaccaatcac 35017459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 4989231 - 4989266
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4989231 atcaattaacagttattcatacacaatcaccaatca 4989266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 18004901 - 18004866
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18004901 atcaattcacagtcattcatacacaatcaccaatca 18004866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 19627647 - 19627682
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||| |||||||||||||||||||||||    
T  19627647 atcaattcacagctattcatacacaatcaccaatca 19627682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 25173761 - 25173796
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  25173761 atcaattcacagttattcatacacgatcaccaatca 25173796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 16134804 - 16134849
Alignment:
Q  96 tcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||    
T  16134804 tcgacaca-atatgcatgtggtaccaaatcacctcaaggtcttcacc 16134849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 16238869 - 16238920
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtac 119  Q
    ||||||||||||||||||| ||||| || |  ||||||||||||||||||||||    
T  16238869 ataagactcatgtcatgatatgcacttatt--gacacatatatgcatgtggtac 16238920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 19984863 - 19984788
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||  ||  |||||||||||||    
T  19984863 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatatccaaaaggtcgtcacct 19984788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 16827534 - 16827460
Alignment:
Q  67 taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||| ||| ||||| || |  |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  16827534 taagactcatgtcaagatatgcacttatt--gacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 16827460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 25646461 - 25646392
Alignment:
Q  158 aaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    |||| |||||||||| |||||| |||||| ||||||| | |  |||||||  ||||||||||||||||||    
T  25646461 aaagatctctgcaagaccgaagtccacaaactagatctcaaaagatctctgtaagaccgaagtccacaaa 25646392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 33323338 - 33323383
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| |||||| |||||||  |||||||||||||||||||||    
T  33323338 gacacataaatgcatttggtaccgaatcacctcaaggtcgtcacct 33323383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 18128488 - 18128524
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  18128488 atcaatttacagttattcatacacaattaccaatcac 18128524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 25174059 - 25174136
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  25174059 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 25174136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 27655745 - 27655668
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  27655745 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 27655668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 130; Significance: 2e-67; HSPs: 5)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 21010 - 21214
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||||||||||| ||||||||||  || | ||||  |||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  21010 atcaattcacagttattcatacacaaacaccaatcac--atacatcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtgg 21103  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccg 216  Q
    ||||| ||| |||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  21104 taccaaatctcctcaaggtcgtcacccatatccagaccaccaaaggtctctgcaaggccgaaccccacaatctagatcactatggatctctgcaagaccg 21203  T
Q  217 aagtccacaaa 227  Q
    |||||||||||    
T  21204 aagtccacaaa 21214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 28600 - 28804
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||||||| ||| ||||||||||  || | ||||  |||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  28600 atcaattcacagttattcatactcaaacaccaatcac--atacatcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtgg 28693  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccg 216  Q
    | ||| ||| |||||||||||||||  |||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28694 tgccaaatctcctcaaggtcgtcactcatatgcagaccaccaagggtctctgcaaggccgaagcccacaatctagatcactatggatctctgcaagaccg 28793  T
Q  217 aagtccacaaa 227  Q
    |||||||||||    
T  28794 aagtccacaaa 28804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 21190 - 21278
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||| |||||| |||||| ||||||||||| |||||||| ||||||| |||||||  ||||||||  || |||||||||||||||    
T  21190 tctctgcaagaccgaagtccacaaactagatcactaaggatctctgcaagaccaaagtcca-taaactagaccac-caatgatctctgcta 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 28780 - 28867
Alignment:
Q  163 tctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||| |||||| |||||| ||||||||||| |||||||| | ||||| |||||||  ||||||||| || | |||||||||||||    
T  28780 tctctgcaagaccgaagtccacaaactagatcactaaggatctctgc-agaccaaagtcca-taaactagatcac-ccatgatctctgcta 28867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 129861 - 129808
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    ||||||||||||||||||| ||||| ||  | |||||||| |||||||||||||||    
T  129861 ataagactcatgtcatgatatgcactta--ttgacacataaatgcatgtggtacca 129808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 3199 - 3012
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||||  ||||||||    
T  3199 ataagactcatg-catgatgtgtacctagttcgacacatatatgcatgtgataccatttcacttcaaggtcgtcacctatatctagaccgctaaaggtct 3101  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  3100 ctgcaaggtcgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 3012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 6264 - 6499
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| |||||||| |||||||| ||||||| | ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6264 catcaaatcacatttattcatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 6361  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagacc 215  Q
    |||||| |||| ||||||||||||| |||||| ||||||  ||| |||| || ||  |||||||| ||||||||||||||| |||||||||| |||||||    
T  6362 taccatttcacttcaaggtcgtcacatatatctagaccgaaaaaagtctatgaaaaaccgaagccaacaatctagatcactaatggatctctgcaagacc 6461  T
Q  216 gaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  6462 gaagtccacaaaactagataactaaatgatctctgcta 6499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 31973 - 32200
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||| ||||| ||||||||||||||| | ||||||| ||||| | | |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  31973 atcaaatcacatttattcatacacaattatcaatcac-aattcacca-ataagactcatg-catgatgtgtacctagaccgacacatatatgcatgtggt 32069  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccac-aatctagatcactatggatctctacaagaccg 216  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||     |||||| ||||||||    
T  32070 accatttcacctcaaggtcgtcacctatatctagaccgtcaaaggtctctgcaaggccggagcccacaaatctagatcac-----atctctgcaagaccg 32164  T
Q  217 aagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||||||| || |||||||||||||||    
T  32165 aagtccacaaaactagatcac-caatgatctctgcta 32200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 30508 - 30695
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||| ||||||||||| ||| ||||||||||||    
T  30508 ataagactcatg-catgatgtgcacctagcccgacacatatatgcatgtgatacaatttcacttcaaggtcatcacctatatctagaacgtcaaaggtct 30606  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  30607 ctgaaaggccgaagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagatcactaaatgatctctgcta 30695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 68783 - 68895
Alignment:
Q  28 agttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcac 127  Q
    ||||||||||||||||||||||||||| |||||  ||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  68783 agttattcatacacaatcaccaatcac-aattcaaaaca--agactcatgtcatgatgtgcacctagtccgacacatatatgcatgtggtaccatatcac 68879  T
Q  128 ctcaaggtcgtcacct 143  Q
    ||||||||||||||||    
T  68880 ctcaaggtcgtcacct 68895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 253
Target Start/End: Complemental strand, 72177 - 71996
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||||| ||||| || |  ||| |||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  72177 aagactcatgtcatgatatgcacttatt--gacgcataaatgcatgtggtaccggatcacctcaaggtcgtcacctatatctagaccgtcaaaggtctct 72080  T
Q  168 gcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  72079 gcaaggccgaagcccacaatctagatcactatggatctctgcaagaccgaagtccac-aaactagatcac-caatgatctctgcta 71996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 75588 - 75546
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat 58  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  75588 acatcaattcacagttattcatacacaatcaccaatcaccaat 75546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 1802 - 2035
Alignment:
Q  19 tcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggta 118  Q
    |||| ||||| |||||||| |||||||| ||||||| | ||| | | ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1802 tcaaatcacatttattcatgcacaatcatcaatcac-atttcacca-ataagactcatgtcatgatgtgcacctagtttgacacatatatgcatgtggta 1899  T
Q  119 ccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccga 217  Q
    |||| |||| ||||||||||| | | |||| |||||||  || |||| || ||  |||||||| ||||||||||||||| |||||||||| |||||||||    
T  1900 ccatttcacttcaaggtcgtctcttttatctagaccgtttaatgtctttgtaattccgaagcctacaatctagatcactaatggatctctgcaagaccga 1999  T
Q  218 agtccacaaaactagattactcaatgatctctgcta 253  Q
    ||||||||||||||||| ||| ||||||||||||||    
T  2000 agtccacaaaactagatcactaaatgatctctgcta 2035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 104; Significance: 6e-52; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 10047 - 10277
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaaca-taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||||| ||||| ||||||||||||||||| || ||||  ||| ||| || ||||||||||| ||||||||| ||||||  ||||||||| |||||||||    
T  10047 catcaaatcacatttattcatacacaatcatcattcac--att-tcagcaataagactcatg-catgatgtgtacctagcccgacacatacatgcatgtg 10142  T
Q  116 gtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagac 214  Q
    ||||||| |||| | ||||| |||||||||||| ||||| |||||||||||| ||||| || |||||||||||||||||||| |||||||||| ||||||    
T  10143 gtaccatttcactttaaggttgtcacctatatctagaccatcaaaggtctctacaaggacggagcccacaatctagatcactaatggatctctgcaagac 10242  T
Q  215 cgaagtccacaaaactagattactcaatgatctct 249  Q
    |||||||| ||||||||||| ||| ||||||||||    
T  10243 cgaagtccgcaaaactagatcactaaatgatctct 10277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 76736 - 76931
Alignment:
Q  19 tcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggta 118  Q
    |||||||||| |||||||| ||||||||||||||||  ||  ||||  |||||||||||||||||| |||||||| |  |||||||||||||||||||||    
T  76736 tcaattcacaattattcatgcacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggta 76830  T
Q  119 ccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaa 218  Q
    ||| |||||||||||||||||||||  |||||||||  ||| ||||||||||||  ||||| |||||| ||||||| | |  ||||||| |||| |||||    
T  76831 ccaaatcacctcaaggtcgtcacctgaatccagaccaccaagggtctctgcaagatcgaagtccacaaactagatctcaaaagatctctgcaaggccgaa 76930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 138524 - 138404
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||| | ||||| |||||||||||||||||||  ||  ||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  138524 atcaattcaaaattatttatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggt 138430  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| |||||||||||||||||||||    
T  138429 accaaatcacctcaaggtcgtcacct 138404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 76910 - 76979
Alignment:
Q  158 aaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    |||| ||||||||||||||||||||| || ||||||||| |  ||||||| |||||||||||||||||||    
T  76910 aaagatctctgcaaggccgaagcccaaaagctagatcacaaatgatctctgcaagaccgaagtccacaaa 76979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 103; Significance: 2e-51; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 108081 - 108223
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||| |||||    
T  108081 ataagactcatgtcatgatgtgcaccaagttcgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccatcaagggtct 108180  T
Q  166 ctgcaaggccgaagcccacaatctagatcact-atggatctct 207  Q
    ||||||||| | |||||||||||||||||||| ||||||||||    
T  108181 ctgcaaggctggagcccacaatctagatcactaatggatctct 108223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 113992 - 113891
Alignment:
Q  28 agttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcac 127  Q
    ||||||| ||||||||||||||||||| |||||  ||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  113992 agttatttatacacaatcaccaatcac-aattcaaaaca--agactcatgtcttgatgtgcacctagtccgacacatatatgcatgtggtaccatttcac 113896  T
Q  128 ctcaa 132  Q
     ||||    
T  113895 ttcaa 113891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 130409 - 130454
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  130409 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 130454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 106563 - 106518
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  106563 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 106518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 6811 - 6734
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  6811 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 6734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 100; Significance: 1e-49; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 256678 - 256474
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  256678 atcaattcacatttattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggt 256584  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccga 217  Q
    |||| |||||||||||||||||||||  |||||||||  ||| ||||||| |||| |||||| |||||| ||||||||| |  ||||||| |||||||||    
T  256583 accaaatcacctcaaggtcgtcacctgaatccagaccaccaagggtctctacaagaccgaagtccacaaactagatcacaaatgatctctgcaagaccga 256484  T
Q  218 agtccacaaa 227  Q
    ||||||||||    
T  256483 agtccacaaa 256474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 125066 - 124952
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||| |||||||| |  |||||||||||||||||||||||| ||| ||  | |||||||||| ||| ||||| |   |||| |||    
T  125066 ataagactcatgccatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctcccaagggtcgtcacccataaccagatctcaaaagatct 124969  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  124968 ctgccaggccgaagccc 124952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 193000 - 193114
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||| |||||||| |  |||||||||||||||||||||||| ||| ||  | |||||||||| | ||||||| |   |||| |||    
T  193000 ataagactcatgccatgatatgcacctaat--gacacatatatgcatgtggtaccaaatctccaaagggtcgtcacccaaatccagatctcaaaagatct 193097  T
Q  166 ctgcaaggccgaagccc 182  Q
     ||| ||||||||||||    
T  193098 ttgccaggccgaagccc 193114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 72085 - 72032
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  72085 ataagactcatgccatgatatgcacctaat--gacacatatatgcatgtggtacca 72032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 76466 - 76413
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  76466 ataagactcatgccatgatatgcacctaat--gacacatatatgcatgtggtacca 76413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 13505 - 13347
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||||| || |||||  |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||  ||| |||||||    
T  13505 aagactcatgtcatgatatgaaccta--tcgacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacccatatccagaccaccaagggtctct 13408  T
Q  168 gcaaggcc-gaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    |||||||| |||||||| |||||||||||||| |||||||| ||||| |||||||||||||    
T  13407 gcaaggcctgaagcccaaaatctagatcactaaggatctctgcaagatcgaagtccacaaa 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 13592 - 13556
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  13592 atcaattcacaattatttatacacaatcaccaatcac 13556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 7225 - 7386
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaa-aggtc 164  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||  |||  ||||    
T  7225 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtactaaatcacctcaaggtcgtcacctatctccagaccaccaaggggtc 7322  T
Q  165 tctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaa 227  Q
    ||||||||||  |||||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  7323 tctgcaaggctaaagcccacaaactagatcactaatggatctctacaagaccgaaatccacaaa 7386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 7130 - 7167
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7130 catcaattcacagttattcatacacaatcaccaatcac 7167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 26533 - 26308
Alignment:
Q  19 tcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggta 118  Q
    |||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||| ||| |||||||| |  |||||||||||||||||||||    
T  26533 tcaattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcaagatatgcacctatt--gacacatatatgcatgtggta 26439  T
Q  119 ccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaa 218  Q
    ||| |||||||||||||||||||||  |||||||||  ||| |||||||||||| |||||| |||||| ||||||| | |  ||||||| |||| |||||    
T  26438 ccaaatcacctcaaggtcgtcacctgaatccagaccaccaagggtctctgcaagaccgaagtccacaaactagatctcaaaagatctctgcaaggccgaa 26339  T
Q  219 gtccacaaaactagattactcaatgatctctgc 251  Q
    | ||| |||||||||| ||  ||||||||||||    
T  26338 gccca-aaaactagatcac-aaatgatctctgc 26308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 26359 - 26290
Alignment:
Q  158 aaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    |||| ||||||||||||||||||||| || ||||||||| |  ||||||| |||||||||||||||||||    
T  26359 aaagatctctgcaaggccgaagcccaaaaactagatcacaaatgatctctgcaagaccgaagtccacaaa 26290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 66442 - 66322
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattc----tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcat 112  Q
    ||||||| || ||||| |||||||||||  ||||||||||||      |||| ||||||||||||||||||| ||||| || |  |||||||| ||||||    
T  66442 catcaatccatagttactcatacacaattcccaatcaccaatcacacttcaaaataagactcatgtcatgatatgcacttatt--gacacataaatgcat 66345  T
Q  113 gtggtaccatatcacctcaaggt 135  Q
    ||||||||  |||||||||||||    
T  66344 gtggtaccggatcacctcaaggt 66322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 2959 - 2799
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||||||||||||||||| || |||| | ||| | | |||||||||||| ||||||||  ||||||  ||||||||||||||||||||    
T  2959 catcaaatcacatttattcatacacaatcatcattcac-atttcacca-ataagactcatg-catgatgtatacctagcccgacacatatatgcatgtgg 2863  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcc 181  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2862 taccat-tcacctcaaggtcgtcacctatatctagaccatcaaaggtctctgcaaggccgaagcc 2799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 26662 - 26502
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||| ||||| ||||||||||||||||| || |||| | ||| | | |||||||||||| ||||||||  ||||||  ||||||||||||||||||||    
T  26662 catcaaatcacatttattcatacacaatcatcattcac-atttcacca-ataagactcatg-catgatgtatacctagcccgacacatatatgcatgtgg 26566  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcc 181  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  26565 taccat-tcacctcaaggtcgtcacctatatctagaccatcaaaggtctctgcaaggccgaagcc 26502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 23320 - 23243
Alignment:
Q  177 aagcccacaatctagatcacta-tggatctctacaagaccgaagtccacaaaactagattactcaatgatctctgcta 253  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  ||| ||||||||||||||    
T  23320 aagcccacaatctagatcactaatggatctctgcaagaccgaagtccacaaaactagaccactaaatgatctctgcta 23243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 8530 - 8646
Alignment:
Q  24 tcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccata 123  Q
    |||||||||||||||||||||||||||||  ||||  |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  8530 tcacagttattcatacacaatcaccaatc-tcaat--tcaaaacaagactcatgtcatgatgtgcacctagtccgacacatatatgcatgtggtaccaaa 8626  T
Q  124 tcacctcaaggtcgtcacct 143  Q
    ||||||||||| ||||||||    
T  8627 tcacctcaaggccgtcacct 8646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 1164 - 1001
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||| ||||||||||||||  ||  ||||  ||||||||||||||| || |||||||| |  ||||||||||||||||||||    
T  1164 atcaattcacaattattcatacccaatcaccaatcacatata-tcaa--taagactcatgtcataatatgcacctatt--gacacatatatgcatgtggt 1070  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaa 186  Q
    |||| ||| |||||||||||||||| || ||||||||  ||| |||||||||||| |||||| ||||||    
T  1069 accaaatctcctcaaggtcgtcacccatgtccagaccaccaagggtctctgcaagaccgaagtccacaa 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 7086 - 6931
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || ||||||||||||||||  ||||||| |||  ||| |||||    
T  7086 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaataacctcaaggtcgtcactcatatccaaaccaccaagggtct 6989  T
Q  166 ctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtcca 223  Q
    ||||||| |||||| |||| | ||||||| | |  ||||||| |||| ||||||||||    
T  6988 ctgcaagaccgaagtccacgaactagatctcaaaagatctctgcaaggccgaagtcca 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 18078 - 18189
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||| |||||    
T  18078 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatatccagaccaccaagggtct 18175  T
Q  166 ctgcaaggccgaag 179  Q
    ||||||| ||||||    
T  18176 ctgcaagaccgaag 18189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 17885 - 17921
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  17885 atcaattaacagttattaatacacaatcaccaatcac 17921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 178
Target Start/End: Original strand, 31186 - 31341
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  ||  ||||  |||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  31186 atcaattcacaattattcatacacaatcaccaatcacatata-tcaa--taagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggt 31280  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaa 178  Q
    |||| ||||||||| |||||||||| ||||||||| |   |||| ||||||| ||||||||    
T  31281 accaaatcacctcagggtcgtcacccatatccagatctcaaaagatctctgctaggccgaa 31341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 3970 - 3893
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3970 ataatactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 3893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 7072 - 7199
Alignment:
Q  69 agactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcac-ctcaaggtcgtcacctatatccagaccgtcaaaggtctct 167  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||  || |  |||||||||||||||||||| |||||   || |||||||    
T  7072 agactcatgttatgatatgcacctagttcgacacatatatgcatgtggtaccaattctctttcaaggtcgtcacctatatctagaccactaagggtctct 7171  T
Q  168 gcaaggccgaagcccacaatctagatcac 196  Q
    ||||||||||||||||||| |||||||||    
T  7172 gcaaggccgaagcccacaa-ctagatcac 7199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 28209 - 28368
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||||||||||||| |||||| ||| || ||| | |||  ||||||||||||||||||| ||||||||  | ||||||||||||||||||||    
T  28209 atcaattcacagttattcatactcaatcatcaaaca-caaatatca--ataagactcatgtcatgatatgcaccta--ttgacacatatatgcatgtggt 28303  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||| ||||||||| |||||||||| ||||||||| |   ||||  |||||| ||||||||||||    
T  28304 accaaatcacctcagggtcgtcacccatatccagatctcaaaagaactctgccaggccgaagccc 28368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 28101 - 28137
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  28101 atcaattcacagttattcatacacaatcaccaatcac 28137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 3445 - 3559
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |   |||| |||    
T  3445 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacccatatccagatctcaaaagatct 3542  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  3543 ctgccaggccgaagccc 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 578 - 653
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  578 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 3205 - 3241
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||| ||||||||||||||||||||||||||||||||    
T  3205 atcacttcacagttattcatacacaatcaccaatcac 3241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 433 - 468
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  433 atcaattcacatttattcatacacaatcaccaatca 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 31017 - 31131
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |   |||| |||    
T  31017 ataagactcatgtcatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacccatatccagatctcaaaagatct 31114  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  31115 ctgccaggccgaagccc 31131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 30800 - 30836
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||| ||||||||||||||||||||||||||||||||    
T  30800 atcacttcacagttattcatacacaatcaccaatcac 30836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 7875 - 8000
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcacca-----attctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||||| |||||||||||||||||||||||||||||     |||  ||| | ||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  7875 aattcatagttattcatacacaatcaccaatcaccactcacatttgcaaaacaagactcatgtcatgatatgcaccta--tcgacacataaatgcatgtg 7972  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||| |||||||||||||||||||||    
T  7973 gtaccaaatcacctcaaggtcgtcacct 8000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 7587 - 7623
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  7587 atcaattcacagttattcatacacaatcaccaatcac 7623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 7715 - 7747
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    |||||||||||||||||||||||||||||||||    
T  7715 atcaattcacagttattcatacacaatcaccaa 7747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 60013 - 60142
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||    
T  60013 acattaattcacagttattcatacacaatcaccaatcaccaatcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgca 60110  T
Q  112 tgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||  |||||||||||||||||||||    
T  60111 tgtggtaccggatcacctcaaggtcgtcacct 60142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 20172 - 20261
Alignment:
Q  109 gcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcacta 198  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||    
T  20172 gcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccatcaaaggtatctgcaaggccaaagcccacaatctagattacta 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 27001 - 27090
Alignment:
Q  109 gcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcacta 198  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||    
T  27001 gcatgtggtaccatttcacttcaaggtcgtcacctatatctagaccatcaaaggtatctgcaaggccaaagcccacaatctagattacta 27090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 140
Target Start/End: Original strand, 14147 - 14243
Alignment:
Q  41 caatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtca 140  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||  |||||||||| ||||||||||||||| ||||||||||||||||||    
T  14147 caatcaccaatcac-aattttcaacataagactcatgtcatgatatgcactta--tcgacacataaatgcatgtggtaccaaatcacctcaaggtcgtca 14243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 684 - 843
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||||||||||||||  ||| |||||||||  ||  ||||  |||||||||||||||| | |||||||| |  ||||||||||||||||||||    
T  684 atcaattcacagttattcatacgtaattaccaatcacatata-tcaa--taagactcatgtcatggtatgcacctatt--gacacatatatgcatgtggt 778  T
Q  118 accatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||| ||| ||| |||||||||||| ||||||||| |   |||| ||||||| ||||||||||||    
T  779 accaaatctcctaaaggtcgtcacccatatccagatctcaaaagatctctgccaggccgaagccc 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 236621 - 236749
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcat 112  Q
    ||||||| |||||||||||||| |||||||||||||||||||    | || | ||||||||||||||||||| ||||| || |  |||||||| ||||||    
T  236621 catcaatccacagttattcatagacaatcaccaatcaccaatcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgcat 236718  T
Q  113 gtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||| ||||||||||||    
T  236719 gtggtaccttatcacctctaggtcgtcacct 236749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 270574 - 270695
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||| ||| | |||| ||||||||||||||||||| ||||| ||  | |||||||| |||||||||||    
T  270574 atcaattcacaaatattcattcacaatcaccaatca-caaatatcaa-ataagactcatgtcatgatatgcactta--ttgacacataaatgcatgtggt 270669  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  ||| |||||||||    
T  270670 accaaatctccaaaagatcgtcacct 270695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 163828 - 163914
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagacc 154  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  163828 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacctgaatccagacc 163914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 118248 - 118203
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||||||   |||||||||||||||||||||    
T  118248 gacacatatatgcatgtggtactgaatcacctcaaggtcgtcacct 118203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 3825 - 3700
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| ||||||| |||| |||| |||||||  ||  |||||| ||  ||||||||||||| ||||||||  ||||||||||||||||||||||    
T  3825 atcaattcacaattattcacacaccatcatcaatcacatata-tcaacaaaa--ctcatgtcatgatatgcaccta--tcgacacatatatgcatgtggt 3731  T
Q  118 accatatcacctcaaggtcgtcacctatatc 148  Q
    |||| |||||||||||||||||||| |||||    
T  3730 accaaatcacctcaaggtcgtcacccatatc 3700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 2491 - 2383
Alignment:
Q  144 atatccagaccgtcaaaggtctctgcaaggcc-gaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaat 242  Q
    |||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||| ||  |||    
T  2491 atatccagaccaccaagggtctctgcaaggcctgaagcccaaaatctagatcactaaggatctctgcaagaccgaagtccac-aaactagatcac-aaat 2394  T
Q  243 gatctctgcta 253  Q
    |||||||||||    
T  2393 gatctctgcta 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 90718 - 90559
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattc-tcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtgg 116  Q
    |||||||||||||||||| ||||||||| ||||||||  || | ||||  ||||||||||| |||||| |||||||| |  ||||||||||||||| |||    
T  90718 atcaattcacagttattcttacacaatctccaatcac--atacatcaa--taagactcatgccatgatatgcacctatt--gacacatatatgcatttgg 90625  T
Q  117 taccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    ||||| ||||||||| |||||||||| ||||||| | |   |||| ||||||| ||||||||||||    
T  90624 taccaaatcacctcagggtcgtcacccatatccatatctcaaaagatctctgccaggccgaagccc 90559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 128886 - 128963
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  128886 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 128963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 90846 - 90811
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||| ||||||||||||||||||||||    
T  90846 atcaattcacagtcattcatacacaatcaccaatca 90811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 128760 - 128795
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||| ||||||||||||||||||||||||||||    
T  128760 atcaattaacagttattcatacacaatcaccaatca 128795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 5994 - 6114
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||| |||| ||||||||||||||||| |||||||  ||  ||||  ||| |||||||||||||| ||||||||  |||||||||| |||||||||||    
T  5994 atcaatacacaattattcatacacaatcatcaatcacatata-tcaa--taaaactcatgtcatgatatgcaccta--tcgacacatacatgcatgtggt 6088  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| |||||||||||||||||||||    
T  6089 accaaatcacctcaaggtcgtcacct 6114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 27043 - 27142
Alignment:
Q  41 caatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtca 140  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||  |||||||||| |||||||| |||||  ||||||||||||||||||    
T  27043 caatcaccaatcac-aattttcaacataagactcatgtcatgatatgcactta--tcgacacataaatgcatgtagtaccggatcacctcaaggtcgtca 27139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 3245 - 3325
Alignment:
Q  66 ataagactcatgt---catgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||||   |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  3245 ataagactcatgtgaacatgatatgcacctagttcgacacatatatgcatgtggtaccaaatcacctctaggtcgtcacct 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 6383 - 6269
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    ||||||||||||||||||| |||||||| |   ||||||||||||||||||||||| |||| |||| |||||||||||||||||||| |   |||| |||    
T  6383 ataagactcatgtcatgatatgcacctatta--acacatatatgcatgtggtaccaaatcatctcagggtcgtcacctatatccagatctcaaaagatct 6286  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| |||| |||||||    
T  6285 ctgccaggcggaagccc 6269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 6454 - 6422
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    ||||||||||||||||| |||||||||||||||    
T  6454 atcaattcacagttatttatacacaatcaccaa 6422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 6305 - 6194
Alignment:
Q  140 acctatatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcact-atggatctctacaagaccgaagtccacaaaactagattact 238  Q
    ||||||||| |||||  |||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||| |||||  |||| ||||||||| |||    
T  6305 acctatatctagaccaccaaaggtctctgcagggctgaagcccacaatctagatcactaatggatctctgcaaggccgaaacccac-aaactagatcact 6207  T
Q  239 caatgatctctgc 251  Q
     ||||||||||||    
T  6206 aaatgatctctgc 6194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 25274 - 25210
Alignment:
Q  79 catgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  25274 catgatatgcacctagttcgacacatatatgcatgtggtacaaaatcacctcaaggtcgtcacct 25210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 182
Target Start/End: Complemental strand, 20978 - 20865
Alignment:
Q  67 taagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtctc 166  Q
    ||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| ||||||||| |||||||||| |||||| || |   |||| ||||    
T  20978 taagactcatgccatgatatgcaccta--tcgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacccatatcctgatctcaaaagatctc 20881  T
Q  167 tgcaaggccgaagccc 182  Q
    ||  ||||||||||||    
T  20880 tgtcaggccgaagccc 20865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 21074 - 21038
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  21074 atcaattcacagttattcatacacaatcaccaatcac 21038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 21202 - 21166
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  21202 atcaattcacaattattcattcacaatcaccaatcac 21166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 37910 - 38030
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    ||||||||||| |||||||||||||||||||||||||  || |   || |||||||||||||||||| ||||| ||  ||||||| || |||||||||||    
T  37910 atcaattcacaattattcatacacaatcaccaatcac--atacatcac-taagactcatgtcatgatatgcacata--tcgacacgtacatgcatgtggt 38004  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||  |||||||||||||||||||||    
T  38005 accggatcacctcaaggtcgtcacct 38030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 249256 - 249140
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||||||||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  249256 atcaattcacaaatattcattcacaatcaccaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 249162  T
Q  118 accatatcacctcaaggtcgtc 139  Q
    |||| |||||||||||||||||    
T  249161 accagatcacctcaaggtcgtc 249140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 40025 - 40139
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccagaccgtcaaaggtct 165  Q
    |||||||||||| |||||| |||||||| |  |||||||| ||||||||||||||| ||||||||| ||| |||||| ||||||||| |   |||| |||    
T  40025 ataagactcatgccatgatatgcacctatt--gacacataaatgcatgtggtaccaaatcacctcagggttgtcacccatatccagatctcaaaagatct 40122  T
Q  166 ctgcaaggccgaagccc 182  Q
    |||| ||||||||||||    
T  40123 ctgccaggccgaagccc 40139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 12644 - 12766
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||| |||||| | |||||||||||||||||||||||||  |||  ||| ||| ||||||||||||||| ||||| || |  |||||||| |||||||||    
T  12644 acattaattcaaaattattcatacacaatcaccaatcac--atttccaa-ataggactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 12738  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||  |||||||||||||||||||||    
T  12739 gtaccggatcacctcaaggtcgtcacct 12766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 15079 - 14995
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccaga 152  Q
    ||||||||||||||||||| |||||||| |  |||||||||||||||||||||| | |||| |||| |||||||||| |||||||||    
T  15079 ataagactcatgtcatgatatgcacctatt--gacacatatatgcatgtggtacaaaatcatctcagggtcgtcacccatatccaga 14995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 26599 - 26635
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  26599 atcaattcacagttattcatacacaatcaccaatcac 26635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 13863 - 13788
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||| |||||||||||| | |||||| |  |||||||||||||||||||||||| |||||||||||||||||||||    
T  13863 ataagattcatgtcatgatatacacctatt--gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 13788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 13957 - 13922
Alignment:
Q  19 tcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  13957 tcaattcacagttattcatacacaatcaccaatcac 13922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 15941 - 16018
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| |||||||||||| || ||| ||  |||||||||||||    
T  15941 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtatcaaatctccaaaaggtcgtcacct 16018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 56378 - 56505
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgca 111  Q
    ||||||||||||||||| ||||||||||||| || ||| ||||    | || | ||||||||||||||||||| ||||| || |  |||||||| |||||    
T  56378 acatcaattcacagttactcatacacaatcatcattcaacaatcacatttccaaataagactcatgtcatgatatgcacttatt--gacacataaatgca 56475  T
Q  112 tgtggtaccatatcacctcaaggtcgtcac 141  Q
    |||||||||| ||||||  |||||||||||    
T  56476 tgtggtaccaaatcaccaaaaggtcgtcac 56505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 4572 - 4697
Alignment:
Q  21 aattcacagttattcatacacaatcaccaatcaccaat----tctc-aacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    |||||| ||||||||||||||| |||||||||||||||    | || || | || |||||||||||||| ||||| || |  |||||||| |||||||||    
T  4572 aattcatagttattcatacacattcaccaatcaccaatcacatatccaaaacaatactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 4669  T
Q  116 gtaccatatcacctcaaggtcgtcacct 143  Q
    |||||  |||||||||||||||||||||    
T  4670 gtaccggatcacctcaaggtcgtcacct 4697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 44; Significance: 4e-16; HSPs: 6)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 19830 - 19955
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatg 113  Q
    |||||||||||  ||||||| ||||||||||||||||||||    | || | ||||||||||| ||||||| ||||| || |  |||||||  ||||||     
T  19830 atcaattcacaaatattcattcacaatcaccaatcaccaatcacatttccaaataagactcatatcatgatatgcacttatt--gacacattaatgcatt 19927  T
Q  114 tggtaccatatcacctcaaggtcgtcac 141  Q
    |||||||| |||||||||||||||||||    
T  19928 tggtaccaaatcacctcaaggtcgtcac 19955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 17672 - 17707
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  17672 atcaattcacagttattcatacacaatcaccaatca 17707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 19702 - 19737
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  19702 atcaattcacagttattcatacacaatcaccaatca 19737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 17768 - 17871
Alignment:
Q  40 acaatcaccaatcaccaat----tctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggt 135  Q
    |||||||||||||||||||    | || | ||||||||||| ||||||| ||||| || |  |||||||  |||||| |||||||| |||||||||||||    
T  17768 acaatcaccaatcaccaatcacatttccaaataagactcatatcatgatatgcacttatt--gacacattaatgcatttggtaccaaatcacctcaaggt 17865  T
Q  136 cgtcac 141  Q
    ||||||    
T  17866 cgtcac 17871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 8289 - 8248
Alignment:
Q  102 catatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  8289 cataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 8248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 13678 - 13637
Alignment:
Q  102 catatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  13678 cataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 13637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 33728 - 33891
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    ||||||||||||| ||||||| ||| | |||||||||||  ||| |||| ||| ||||||||||||||| ||||| || |  |||||||| |||||||||    
T  33728 acatcaattcacaattattcacacatactcaccaatcac--attttcaa-atatgactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 33822  T
Q  116 gtaccatatcacctcaaggtcgtcacct--atatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||||| ||| ||  |||||||||||||  | ||||||| |   |||| ||||||| ||||||||||||    
T  33823 gtaccaaatctccaaaaggtcgtcacctccaaatccagatctcaaaagatctctgccaggccgaagccc 33891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 32853 - 32778
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  32853 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 32778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 33536 - 33571
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  33536 atcaattcacatttattcatacacaatcaccaatca 33571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 39116 - 38953
Alignment:
Q  16 acatcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtg 115  Q
    ||||||||||||| ||||||| ||| | |||||||||||  ||| |||| ||| ||||||||||||||| ||||| || |  |||||||| |||||||||    
T  39116 acatcaattcacaattattcacacatactcaccaatcac--attttcaa-atatgactcatgtcatgatatgcacttatt--gacacataaatgcatgtg 39022  T
Q  116 gtaccatatcacctcaaggtcgtcacct--atatccagaccgtcaaaggtctctgcaaggccgaagccc 182  Q
    |||||| ||| ||  |||||||||||||  | ||||||| |   |||| ||||||| ||||||||||||    
T  39021 gtaccaaatctccaaaaggtcgtcacctccaaatccagatctcaaaagatctctgccaggccgaagccc 38953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 39991 - 40066
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  39991 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 40066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 39308 - 39273
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39308 atcaattcacatttattcatacacaatcaccaatca 39273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 3152 - 3227
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||| || |||||| |||||||| |  |||||||| ||||||||||||||| |||||||||||||||||||||    
T  3152 ataagactcgtggcatgatatgcacctatt--gacacatacatgcatgtggtaccaaatcacctcaaggtcgtcacct 3227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 3057 - 3093
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||| |||||||||||||||| |||||||||    
T  3057 atcaattcacggttattcatacacaattaccaatcac 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 211 - 256
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  211 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 5266 - 5311
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  5266 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 3799 - 3844
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  3799 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 3844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 84942 - 84987
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  84942 cgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 84987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 26080 - 26125
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacc 142  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  26080 cgacacatatatgcatgtggtaccaaatcacctaaaggtcgtcacc 26125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 197762 - 197687
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| || |||||||||||| ||| ||  |||||||||||||    
T  197762 ataagactcatgtcatgatatgcacttatt--gacacataaatacatgtggtaccaaatctccaaaaggtcgtcacct 197687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 109787 - 109667
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| ||||||| | ||||||  |||  ||| ||||||||||||||||||| |||||||| |  |||||||| |||||||||||    
T  109787 atcaattcacaaatattcattcacaatctcaaatcac--atttccaa-ataagactcatgtcatgatatgcacctatt--gacacataaatgcatgtggt 109693  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  |||||||||||||    
T  109692 accaaatctccaaaaggtcgtcacct 109667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 109941 - 109906
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  109941 atcaattcacagttattcatacacaatcaccaatca 109906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 54140 - 54213
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcac 141  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||    
T  54140 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcac 54213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 3118 - 3193
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||  |||||| ||||||||  ||||||| || ||||||||||||||| ||||||||||| |||||||||    
T  3118 ataagactcatagcatgatatgcaccta--tcgacacgtacatgcatgtggtaccaaatcacctcaagctcgtcacct 3193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 2767 - 2803
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2767 atcaattcatagttattcatacacaatcaccaatcac 2803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 2895 - 2931
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2895 atcaattcatagttattcatacacaatcaccaatcac 2931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 2639 - 2675
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  2639 atcaatttacagttattcatacacaatcatcaatcac 2675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 3023 - 3055
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    ||||||||| |||||||||||||||||||||||    
T  3023 atcaattcatagttattcatacacaatcaccaa 3055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 5726 - 5801
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||||||  |||||| ||||||||  ||||||| || ||||||||||||||| ||||||||||| |||||||||    
T  5726 ataagactcatagcatgatatgcaccta--tcgacacgtacatgcatgtggtaccaaatcacctcaagctcgtcacct 5801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 671 - 706
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  671 atcaattcacagttattcatacacaatcaccaatca 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 825 - 945
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggt 117  Q
    |||||||||||  ||||||| |||||||  |||||||  |||  ||| ||||||||||||||||||| ||||| || |  |||||||| |||||||||||    
T  825 atcaattcacaaatattcattcacaatcttcaatcac--atttccaa-ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggt 919  T
Q  118 accatatcacctcaaggtcgtcacct 143  Q
    |||| ||| ||  |||||||||||||    
T  920 accaaatctccaaaaggtcgtcacct 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 5503 - 5539
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  5503 atcaatttacagttattcatacacaatcatcaatcac 5539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 5631 - 5663
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaa 50  Q
    ||||||||| |||||||||||||||||||||||    
T  5631 atcaattcatagttattcatacacaatcaccaa 5663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 94807 - 94876
Alignment:
Q  158 aaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaa 227  Q
    |||| ||||||||||||||||||||| || ||||||||| |  ||||||| |||||| ||||||||||||    
T  94807 aaagatctctgcaaggccgaagcccaaaaactagatcacaaatgatctctgcaagactgaagtccacaaa 94876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 94753 - 94858
Alignment:
Q  144 atatccagaccgtcaaaggtctctgcaaggccgaagcccacaatctagatcactatggatctctacaagaccgaagtccacaaaactagattactcaatg 243  Q
    |||||||||||| ||| |||||||||||| |||||| |||||| ||||||| | |  ||||||| |||| |||||| ||| |||||||||| ||  ||||    
T  94753 atatccagaccgccaagggtctctgcaagaccgaagtccacaaactagatctcaaaagatctctgcaaggccgaagccca-aaaactagatcac-aaatg 94850  T
Q  244 atctctgc 251  Q
    ||||||||    
T  94851 atctctgc 94858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 94453 - 94489
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||||| ||||||||||    
T  94453 atcaattcacagttattcatacacaaccaccaatcac 94489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 2827 - 2717
Alignment:
Q  31 tattcatacacaatcaccaatcaccaattctcaacataagactcatgtcatgat--gtgcacctagttcgacacatatatgcatgtggtaccatatcacc 128  Q
    ||||||| |||||||||||||||| |||  |||| |||||||||||||||||||  |||||| || |  |||||||| ||||||||||||||| ||| ||    
T  2827 tattcattcacaatcaccaatcacaaata-tcaa-ataagactcatgtcatgatatgtgcacttatt--gacacataaatgcatgtggtaccaaatctcc 2732  T
Q  129 tcaaggtcgtcacct 143  Q
      |||||||||||||    
T  2731 aaaaggtcgtcacct 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 1530 - 1614
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacctatatccaga 152  Q
    |||||||||||| |||||| |||||||| |  |||||||||||||||||||||||| ||| ||  | |||||||||| | |||||||    
T  1530 ataagactcatgccatgatatgcacctaat--gacacatatatgcatgtggtaccaaatctccaaagggtcgtcacccaaatccaga 1614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 156227 - 156192
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  156227 atcaattcacagttattcatacacaatcaccaatca 156192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 156012 - 155935
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  156012 acataagactcatgttatgatctgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 155935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 12861 - 12786
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  12861 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 12786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 5259 - 5184
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||| |||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  5259 ataaaactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 21676 - 21642
Alignment:
Q  19 tcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||||||||||||||||||||    
T  21676 tcaattcacagttattcatacacaatcaccaatca 21642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 145031 - 145106
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||  ||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||||||||||    
T  145031 ataagactcatgctatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcgtcacct 145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 147290 - 147365
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||  ||||| |||||||| |  |||||||||||||||||||||||| ||| ||  |||||| ||||||    
T  147290 ataagactcatgctatgatatgcacctatt--gacacatatatgcatgtggtaccaaatctccaaaaggtcatcacct 147365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 144936 - 144972
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  144936 atcaattcacaattattcattcacaatcaccaatcac 144972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 147195 - 147231
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  147195 atcaattcacaattattcattcacaatcaccaatcac 147231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 217410 - 217335
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  217410 ataagactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 217335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 99651 - 99689
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggt 135  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  99651 cgacacatatatgtatgtggtaccaaatcacctcaaggt 99689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 5680 - 5757
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||  ||||| ||||| ||  | |||||||| ||||||||||||||| ||| |  ||||||||||||||    
T  5680 acataagactcatgctatgatatgcactta--tggacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacct 5757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 4995 - 4950
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  4995 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 4950  T

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Target: scaffold0346 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 15980 - 15943
Alignment:
Q  17 catcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15980 catcaattcacagttgttcatacacaatcaccaatcac 15943  T

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Target: scaffold0346; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 15884 - 15833
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtac 119  Q
    |||||||||| |||||||| |||||||| |  ||||||||||||||||||||||    
T  15884 ataagactcacgtcatgatatgcacctatt--gacacatatatgcatgtggtac 15833  T

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Target: scaffold0346; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 14256 - 14215
Alignment:
Q  97 cgacacatatatgcatgtggtaccatatcacctcaaggtcgt 138  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||    
T  14256 cgacagatacatgcatgtggtaccaaatcacctcaaggtcgt 14215  T

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Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 7307 - 7262
Alignment:
Q  98 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||    
T  7307 gacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacct 7262  T

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Target: scaffold1560 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 1448 - 1371
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  1448 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 1371  T

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Target: scaffold0302 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 4339 - 4416
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  4339 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 4416  T

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Target: scaffold0191 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 537 - 501
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||||||| ||||||||||||    
T  537 atcaattcacagttattcatacaccatcaccaatcac 501  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 77749 - 77785
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    |||||||||||||||||||| ||||||||||||||||    
T  77749 atcaattcacagttattcatgcacaatcaccaatcac 77785  T

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Target: scaffold0483 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 4682 - 4647
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4682 atcaatttacagttattcatacacaatcaccaatca 4647  T

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Target: scaffold0335 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 9974 - 9939
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9974 atcaattcatagttattcatacacaatcaccaatca 9939  T

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Target: scaffold0315 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 16917 - 16952
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16917 atcaattcacagttattcacacacaatcaccaatca 16952  T

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Target: scaffold0315; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 17075 - 17187
Alignment:
Q  70 gactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct--atatccagaccgtcaaaggtctct 167  Q
    ||||||||||||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||| ||||||  | ||||||| |   |||| |||||    
T  17075 gactcatgtcatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcatcacctccaaatccagatctcaaaagatctct 17172  T
Q  168 gcaaggccgaagccc 182  Q
    || ||||||||||||    
T  17173 gccaggccgaagccc 17187  T

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Target: scaffold0253 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 14997 - 15032
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||||||||||| |||||||||||||||||    
T  14997 atcaattcacagttattcgtacacaatcaccaatca 15032  T

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Target: scaffold0234 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 19303 - 19255
Alignment:
Q  68 aagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggta 118  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  19303 aagactcatgtcatgatatgcaccta--tcgccacatatatgcatgtggta 19255  T

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Target: scaffold0125 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 29786 - 29821
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    |||||||||| |||||||||||||||||||||||||    
T  29786 atcaattcaccgttattcatacacaatcaccaatca 29821  T

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Target: scaffold0109 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 49522 - 49487
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatca 53  Q
    ||||||| ||||||||||||||||||||||||||||    
T  49522 atcaatttacagttattcatacacaatcaccaatca 49487  T

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Target: scaffold0467 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 11692 - 11617
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||||| | ||||| || |  |||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  11692 ataagactcatgtcatgttatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 11617  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 2621 - 2576
Alignment:
Q  99 acacatatatgcatgtggtaccatatcacctc-aaggtcgtcacct 143  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||    
T  2621 acacatatatgcgtgtggtaccaaatcacctcaaaggtcgtcacct 2576  T

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Target: scaffold0384 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 75 - 1
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtca 140  Q
    ||||||||||||||| ||||| ||||| || |  |||||||| ||||||||||||||| ||| ||  ||||||||||    
T  75 acataagactcatgttatgatatgcacttatt--gacacataaatgcatgtggtaccaaatctccaaaaggtcgtca 1  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 47
Target Start/End: Original strand, 31363 - 31392
Alignment:
Q  18 atcaattcacagttattcatacacaatcac 47  Q
    ||||||||||||||||||||||||||||||    
T  31363 atcaattcacagttattcatacacaatcac 31392  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 4565 - 4529
Alignment:
Q  18 atcaattcacagttattcatacacaatcaccaatcac 54  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  4565 atcaattcacatttattcatgcacaatcaccaatcac 4529  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 9588 - 9511
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| |  || |||||||| ||||||||||||||| ||| ||  |||||| ||||||    
T  9588 acataagactcatgttatgatatgcactt--tttgacacataaatgcatgtggtaccaaatctccaaaaggtcatcacct 9511  T

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Target: scaffold0218 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 6883 - 6830
Alignment:
Q  66 ataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtacca 121  Q
    |||||||||||| |||||| |||||||| |   |||||||||||||||||||||||    
T  6883 ataagactcatgccatgatatgcacctatta--acacatatatgcatgtggtacca 6830  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 106498 - 106575
Alignment:
Q  64 acataagactcatgtcatgatgtgcacctagttcgacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 143  Q
    ||||||||||||||| ||||| ||||| || |  ||| |||| ||||||||||||||| ||| ||  |||||||||||||    
T  106498 acataagactcatgttatgatatgcacttatt--gactcataaatgcatgtggtaccaaatctccaaaaggtcgtcacct 106575  T

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