View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12734_high_9 (Length: 234)
Name: NF12734_high_9
Description: NF12734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12734_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15169862 - 15170079
Alignment:
| Q |
1 |
accttgatggagatgattttgaagatgagtttccggttaagaatcatcatgatgatctagaccagaaccgcgatgttaatcatgtggtaatttcttttaa |
100 |
Q |
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| T |
15169862 |
accttgatggagatgattttgaagatgagtttccggttaagaatcatcatgatgatctagaccagaaccgcgatgttaatcatgtggtaatttcttttaa |
15169961 |
T |
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| Q |
101 |
tgatatgaaagaatactcatgaatgtgaaattaacttttaaaaaattaacagaaatgattgaatatgaataattaaaaagattatatgattatttacagg |
200 |
Q |
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| T |
15169962 |
tgatatgaaagaatactcatgaatgtgaaattaacttttaaaaaattaacagaaatgattgaatatgaataattaaaaagattatatgattatttacagg |
15170061 |
T |
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| Q |
201 |
aaagtgtggactacaatc |
218 |
Q |
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|||||||||||||||||| |
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| T |
15170062 |
aaagtgtggactacaatc |
15170079 |
T |
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