View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12734_low_3 (Length: 406)
Name: NF12734_low_3
Description: NF12734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12734_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 13 - 364
Target Start/End: Original strand, 36615373 - 36615725
Alignment:
| Q |
13 |
atggacatcattttgcttcagtgttttcttcttctgattaattgaaagatttgttgaagatatgttgagagccaccacttaattgttttcatagttctcc |
112 |
Q |
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| T |
36615373 |
atgggcatcattttgcttcagtgttttcttcttctgattaattgaaagatttgttgaagatatgttgagagccaccacttaattgttttcatagttctcc |
36615472 |
T |
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| Q |
113 |
gaataaacatttcaaaacaacataaataaagttgtatcttttatcattctccttggtgaaagaaagaataaaagttttctcaagttatttaaaacttgaa |
212 |
Q |
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| T |
36615473 |
gaataaacatttcaaaagaacataaataaagttgcatcttttatctttctccttagtgaaagaaagaataaaagttttctcaagttatttaaaacttgaa |
36615572 |
T |
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| Q |
213 |
gatttggttggtggcctgaaaagc-gagataaggataatgtgttaccgtaaaatatggcattttttattaggtggggatggctatgtggaatggaatgaa |
311 |
Q |
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| T |
36615573 |
gatttggttggtggcctgaaaagctgagataaggataatgtgctaccgtaaaatatggcattttttattaggtggggatggctatgtggaatggaatgaa |
36615672 |
T |
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| Q |
312 |
ttagttggtgccatacaagtctattatatctatctaaacacaatttgcttcta |
364 |
Q |
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| T |
36615673 |
ttagttggtgccatacaagtctattatatctatctaaacacaatttgcttcta |
36615725 |
T |
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