View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12734_low_6 (Length: 302)
Name: NF12734_low_6
Description: NF12734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12734_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 7 - 281
Target Start/End: Original strand, 44465445 - 44465719
Alignment:
| Q |
7 |
gacgttggagatatttgttgattaggtctgagaattttcgggattgtgatagtgattttttgactgagaatcgaccataatcataaacgttagcgttttg |
106 |
Q |
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| T |
44465445 |
gacgttggagatatttgttgattaggtctgagaattttcgggattgtgatagtgattttttgactgagaatcgaccataatcataaacgttagcgttttg |
44465544 |
T |
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| Q |
107 |
aggtgggagaatggatttgcaataggttgggtcaggggtggatttgcatgctgctcctggtgaaataggtgtaattggatttggattattaacggtgttt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44465545 |
aggtgggagaatggatttgcaataggttgggtcaggggtggatttgcatgctgctcctggtgaaataggtgtaattggatttggattattaacggtgttt |
44465644 |
T |
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| Q |
207 |
tgtgaaaatgctatagagacagataaaagaatgagaaatattgagaggggattacatagcttggaagccatattg |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44465645 |
tgtgaaaatgctatagagacagataaaagaatgagaaatattgagaggggattacatagcttggaagccatattg |
44465719 |
T |
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