View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12736_low_6 (Length: 255)

Name: NF12736_low_6
Description: NF12736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12736_low_6
NF12736_low_6
[»] chr3 (69 HSPs)
chr3 (4-170)||(23443080-23443246)
chr3 (4-162)||(2745179-2745337)
chr3 (64-170)||(36817555-36817661)
chr3 (4-113)||(50953292-50953401)
chr3 (50-169)||(7843037-7843156)
chr3 (55-169)||(41137652-41137766)
chr3 (55-171)||(7841053-7841169)
chr3 (55-170)||(48250894-48251009)
chr3 (55-169)||(49219816-49219930)
chr3 (4-68)||(48250817-48250881)
chr3 (50-171)||(50216874-50216995)
chr3 (113-171)||(49217043-49217101)
chr3 (4-68)||(14398596-14398660)
chr3 (83-170)||(7247913-7248000)
chr3 (55-121)||(14398517-14398583)
chr3 (55-113)||(50957691-50957749)
chr3 (4-68)||(29929487-29929552)
chr3 (4-68)||(29978641-29978706)
chr3 (55-110)||(2743391-2743446)
chr3 (55-110)||(13743286-13743341)
chr3 (3-76)||(8160941-8161015)
chr3 (55-169)||(46989481-46989595)
chr3 (85-171)||(9473943-9474025)
chr3 (4-68)||(13747666-13747731)
chr3 (51-163)||(66841-66952)
chr3 (4-110)||(6505923-6506031)
chr3 (4-68)||(36817470-36817533)
chr3 (4-51)||(7837674-7837721)
chr3 (4-55)||(21956152-21956203)
chr3 (55-169)||(14402995-14403109)
chr3 (3-53)||(30947599-30947649)
chr3 (55-169)||(34691560-34691673)
chr3 (4-70)||(46993178-46993244)
chr3 (56-113)||(6740895-6740952)
chr3 (4-68)||(29918288-29918353)
chr3 (4-68)||(29967441-29967506)
chr3 (85-170)||(46993226-46993311)
chr3 (85-169)||(54964917-54965002)
chr3 (83-171)||(2432996-2433084)
chr3 (4-48)||(16444677-16444721)
chr3 (51-111)||(34694455-34694515)
chr3 (107-171)||(44227061-44227125)
chr3 (55-171)||(55385069-55385185)
chr3 (55-110)||(4002530-4002585)
chr3 (4-55)||(7842964-7843015)
chr3 (55-110)||(19341619-19341674)
chr3 (55-154)||(28611125-28611224)
chr3 (55-126)||(41802975-41803046)
chr3 (55-126)||(42756136-42756207)
chr3 (86-169)||(51696571-51696654)
chr3 (3-53)||(3948806-3948856)
chr3 (55-169)||(43478855-43478969)
chr3 (4-68)||(9429796-9429861)
chr3 (64-113)||(9429883-9429932)
chr3 (59-108)||(13747747-13747796)
chr3 (130-170)||(5136519-5136559)
chr3 (18-54)||(9582623-9582659)
chr3 (50-170)||(16647167-16647287)
chr3 (55-171)||(41579749-41579865)
chr3 (55-126)||(29918366-29918437)
chr3 (55-126)||(29967519-29967590)
chr3 (55-169)||(43476125-43476240)
chr3 (51-169)||(49609316-49609435)
chr3 (83-169)||(11380375-11380461)
chr3 (55-160)||(48888684-48888788)
chr3 (130-170)||(26245269-26245309)
chr3 (5-68)||(28611048-28611112)
chr3 (130-170)||(47070401-47070441)
chr3 (85-169)||(51806957-51807041)
[»] scaffold0116 (2 HSPs)
scaffold0116 (4-169)||(11235-11400)
scaffold0116 (55-109)||(15980-16034)
[»] chr7 (36 HSPs)
chr7 (4-169)||(29593302-29593467)
chr7 (4-110)||(618698-618805)
chr7 (55-169)||(42499343-42499457)
chr7 (4-80)||(47741787-47741863)
chr7 (50-171)||(27453614-27453735)
chr7 (88-171)||(43686906-43686989)
chr7 (55-170)||(47776265-47776380)
chr7 (88-169)||(40590549-40590630)
chr7 (85-169)||(34142655-34142739)
chr7 (51-168)||(45361584-45361701)
chr7 (4-68)||(42499470-42499534)
chr7 (51-171)||(46738734-46738854)
chr7 (55-166)||(36186498-36186608)
chr7 (55-161)||(34139839-34139945)
chr7 (55-161)||(34742420-34742526)
chr7 (55-169)||(5537800-5537920)
chr7 (4-68)||(18105434-18105499)
chr7 (50-171)||(39460485-39460606)
chr7 (3-68)||(43624092-43624157)
chr7 (4-68)||(47060987-47061052)
chr7 (55-166)||(9494831-9494942)
chr7 (56-170)||(28980199-28980313)
chr7 (3-53)||(30786602-30786652)
chr7 (3-53)||(43033051-43033101)
chr7 (3-53)||(45763457-45763507)
chr7 (128-169)||(46740634-46740675)
chr7 (105-169)||(47741714-47741778)
chr7 (83-154)||(42025138-42025209)
chr7 (55-169)||(30355264-30355378)
chr7 (55-113)||(45350897-45350955)
chr7 (131-169)||(46740594-46740632)
chr7 (59-169)||(46863373-46863483)
chr7 (5-45)||(10708229-10708269)
chr7 (56-116)||(29592530-29592590)
chr7 (131-171)||(40323200-40323240)
chr7 (105-169)||(48829897-48829961)
[»] chr1 (73 HSPs)
chr1 (4-170)||(23913790-23913956)
chr1 (4-169)||(5077875-5078040)
chr1 (4-171)||(44465528-44465696)
chr1 (4-170)||(30905704-30905869)
chr1 (50-170)||(6562181-6562301)
chr1 (4-110)||(41453831-41453938)
chr1 (3-113)||(20349447-20349558)
chr1 (55-172)||(9711676-9711793)
chr1 (4-97)||(29356638-29356732)
chr1 (55-172)||(48751435-48751552)
chr1 (177-240)||(36683075-36683138)
chr1 (51-169)||(27484993-27485111)
chr1 (5-103)||(4516031-4516130)
chr1 (84-171)||(37014882-37014969)
chr1 (55-170)||(51289985-51290100)
chr1 (59-169)||(51288821-51288931)
chr1 (55-169)||(23276133-23276247)
chr1 (4-70)||(44621065-44621131)
chr1 (4-68)||(8460044-8460109)
chr1 (4-170)||(22397753-22397919)
chr1 (5-68)||(46973264-46973328)
chr1 (55-171)||(52805558-52805674)
chr1 (92-171)||(29438082-29438161)
chr1 (55-110)||(44470036-44470091)
chr1 (55-166)||(46973141-46973252)
chr1 (55-113)||(6557905-6557963)
chr1 (55-109)||(15047276-15047330)
chr1 (55-113)||(30910028-30910086)
chr1 (3-68)||(31945807-31945873)
chr1 (59-169)||(44596795-44596905)
chr1 (4-68)||(9711598-9711663)
chr1 (94-171)||(29434905-29434982)
chr1 (4-61)||(50117725-50117782)
chr1 (55-116)||(52802117-52802178)
chr1 (4-68)||(6562110-6562173)
chr1 (5-67)||(19499060-19499123)
chr1 (55-170)||(29765554-29765669)
chr1 (55-166)||(41804058-41804169)
chr1 (64-166)||(35521551-35521653)
chr1 (4-68)||(15047343-15047408)
chr1 (4-68)||(19054197-19054262)
chr1 (55-116)||(23359374-23359435)
chr1 (4-48)||(13629473-13629517)
chr1 (55-171)||(51271616-51271732)
chr1 (4-70)||(13173894-13173961)
chr1 (55-126)||(46141759-46141830)
chr1 (55-170)||(46886412-46886527)
chr1 (3-53)||(3948408-3948458)
chr1 (3-53)||(3983164-3983214)
chr1 (5-51)||(7981087-7981133)
chr1 (55-169)||(11183120-11183234)
chr1 (64-166)||(19053996-19054098)
chr1 (4-69)||(37014951-37015017)
chr1 (3-53)||(38776072-38776122)
chr1 (50-103)||(22345261-22345313)
chr1 (55-169)||(27487665-27487775)
chr1 (55-139)||(8458949-8459032)
chr1 (55-171)||(13173768-13173883)
chr1 (55-166)||(19499137-19499246)
chr1 (55-171)||(21144630-21144745)
chr1 (4-51)||(1654823-1654870)
chr1 (85-172)||(6437594-6437681)
chr1 (51-126)||(49927534-49927609)
chr1 (130-172)||(26944410-26944452)
chr1 (5-51)||(36076506-36076552)
chr1 (111-169)||(48749702-48749760)
chr1 (85-170)||(471118-471203)
chr1 (85-113)||(1167552-1167580)
chr1 (117-173)||(26879382-26879438)
chr1 (55-103)||(29352259-29352307)
chr1 (89-169)||(32161351-32161431)
chr1 (58-126)||(38689909-38689976)
chr1 (55-103)||(44336249-44336297)
[»] chr5 (58 HSPs)
chr5 (4-170)||(27867793-27867960)
chr5 (4-171)||(13568048-13568216)
chr5 (64-169)||(1035118-1035223)
chr5 (55-169)||(39743173-39743287)
chr5 (55-171)||(34122456-34122572)
chr5 (56-169)||(41798752-41798865)
chr5 (58-170)||(25897107-25897219)
chr5 (4-98)||(7021831-7021926)
chr5 (50-169)||(28387199-28387322)
chr5 (58-168)||(34123963-34124073)
chr5 (4-96)||(37820827-37820920)
chr5 (55-169)||(17966911-17967025)
chr5 (4-68)||(1035245-1035309)
chr5 (56-166)||(1397376-1397486)
chr5 (85-167)||(34077762-34077844)
chr5 (56-170)||(41799793-41799907)
chr5 (4-68)||(28387330-28387394)
chr5 (89-172)||(42942510-42942593)
chr5 (55-171)||(17965781-17965897)
chr5 (4-68)||(25897027-25897091)
chr5 (4-55)||(34077842-34077893)
chr5 (4-59)||(34123870-34123925)
chr5 (55-169)||(7757259-7757373)
chr5 (3-76)||(14279877-14279951)
chr5 (5-68)||(18538283-18538347)
chr5 (5-68)||(33993341-33993405)
chr5 (55-166)||(18538360-18538471)
chr5 (4-55)||(28886366-28886417)
chr5 (4-51)||(38860150-38860197)
chr5 (55-169)||(28388544-28388658)
chr5 (4-68)||(4204158-4204223)
chr5 (4-61)||(11033410-11033467)
chr5 (5-50)||(21979646-21979691)
chr5 (55-171)||(30887385-30887501)
chr5 (4-51)||(31098882-31098929)
chr5 (87-169)||(42537135-42537217)
chr5 (55-169)||(43094601-43094715)
chr5 (55-116)||(25889981-25890042)
chr5 (58-171)||(43093940-43094053)
chr5 (83-171)||(20192285-20192373)
chr5 (4-51)||(7800934-7800981)
chr5 (55-110)||(13563660-13563715)
chr5 (55-166)||(19228671-19228782)
chr5 (55-170)||(25877555-25877669)
chr5 (85-171)||(540892-540977)
chr5 (83-169)||(18310074-18310160)
chr5 (5-51)||(30354344-30354390)
chr5 (83-169)||(30611173-30611259)
chr5 (85-154)||(31787501-31787571)
chr5 (64-101)||(7017514-7017551)
chr5 (55-103)||(542815-542863)
chr5 (89-169)||(3600270-3600350)
chr5 (47-110)||(8539532-8539596)
chr5 (85-113)||(13707413-13707441)
chr5 (93-169)||(20200211-20200287)
chr5 (85-113)||(29430012-29430040)
chr5 (85-113)||(29430633-29430661)
chr5 (85-113)||(39742565-39742593)
[»] chr8 (48 HSPs)
chr8 (4-168)||(31957769-31957933)
chr8 (4-169)||(45454340-45454506)
chr8 (4-169)||(41744668-41744833)
chr8 (50-169)||(1114677-1114796)
chr8 (72-171)||(20546785-20546884)
chr8 (64-169)||(35966783-35966888)
chr8 (55-169)||(35962241-35962355)
chr8 (51-170)||(41276881-41277000)
chr8 (5-68)||(18205847-18205911)
chr8 (85-169)||(34234517-34234601)
chr8 (4-103)||(39752971-39753070)
chr8 (83-170)||(5304197-5304284)
chr8 (85-168)||(39846986-39847069)
chr8 (3-68)||(7340128-7340194)
chr8 (55-169)||(44052251-44052365)
chr8 (4-53)||(35966697-35966746)
chr8 (4-68)||(1114804-1114867)
chr8 (51-103)||(1116209-1116261)
chr8 (5-68)||(22577726-22577790)
chr8 (3-113)||(30305515-30305627)
chr8 (50-169)||(43188007-43188127)
chr8 (83-169)||(18441494-18441580)
chr8 (4-68)||(2146904-2146969)
chr8 (5-54)||(4866510-4866559)
chr8 (55-116)||(20549257-20549318)
chr8 (56-101)||(41743892-41743937)
chr8 (55-169)||(43262359-43262469)
chr8 (55-171)||(39601636-39601752)
chr8 (55-171)||(41858146-41858262)
chr8 (55-166)||(7168025-7168136)
chr8 (83-154)||(21406216-21406287)
chr8 (83-154)||(21800708-21800779)
chr8 (89-172)||(27703992-27704075)
chr8 (83-153)||(26455734-26455804)
chr8 (3-53)||(32378867-32378917)
chr8 (3-53)||(32432822-32432872)
chr8 (83-173)||(38134292-38134382)
chr8 (89-169)||(27704589-27704669)
chr8 (59-170)||(3641579-3641690)
chr8 (51-126)||(7172608-7172683)
chr8 (4-51)||(35389587-35389634)
chr8 (55-110)||(38135634-38135689)
chr8 (55-126)||(39751051-39751121)
chr8 (6-48)||(7168170-7168212)
chr8 (130-171)||(22550964-22551005)
chr8 (55-91)||(39495-39531)
chr8 (82-126)||(3395869-3395913)
chr8 (58-126)||(18205763-18205831)
[»] chr4 (46 HSPs)
chr4 (55-171)||(9889926-9890042)
chr4 (4-166)||(4768615-4768778)
chr4 (50-169)||(41023320-41023439)
chr4 (50-170)||(50274693-50274813)
chr4 (55-170)||(37394181-37394296)
chr4 (51-169)||(16983456-16983574)
chr4 (4-68)||(15999747-15999811)
chr4 (55-171)||(16984186-16984302)
chr4 (55-154)||(37395216-37395316)
chr4 (4-75)||(1087888-1087959)
chr4 (51-169)||(1041869-1041987)
chr4 (55-169)||(8109325-8109439)
chr4 (83-169)||(56138181-56138267)
chr4 (4-68)||(9890055-9890119)
chr4 (47-169)||(1044535-1044658)
chr4 (42-103)||(3403847-3403909)
chr4 (55-169)||(50278823-50278937)
chr4 (5-73)||(18581280-18581349)
chr4 (5-76)||(17139651-17139723)
chr4 (3-113)||(49566421-49566533)
chr4 (1-67)||(4975827-4975894)
chr4 (105-172)||(19073714-19073781)
chr4 (55-113)||(15995712-15995770)
chr4 (55-113)||(19069177-19069235)
chr4 (4-50)||(19073603-19073649)
chr4 (12-74)||(30042506-30042568)
chr4 (4-60)||(3450027-3450084)
chr4 (4-68)||(21470964-21471029)
chr4 (87-160)||(56140689-56140762)
chr4 (56-171)||(9491285-9491394)
chr4 (55-170)||(39588025-39588140)
chr4 (5-75)||(51644447-51644518)
chr4 (55-113)||(15999824-15999882)
chr4 (4-68)||(4979864-4979929)
chr4 (55-172)||(56304808-56304924)
chr4 (55-166)||(21472509-21472620)
chr4 (55-166)||(37959745-37959856)
chr4 (4-51)||(44049177-44049224)
chr4 (4-62)||(13173301-13173359)
chr4 (85-169)||(37015865-37015949)
chr4 (55-171)||(39590593-39590709)
chr4 (83-154)||(9472807-9472878)
chr4 (4-51)||(11494622-11494669)
chr4 (9-54)||(24417370-24417414)
chr4 (4-51)||(38464716-38464760)
chr4 (87-164)||(51683199-51683276)
[»] chr2 (48 HSPs)
chr2 (55-169)||(27276399-27276513)
chr2 (4-173)||(20951020-20951188)
chr2 (4-169)||(1101026-1101191)
chr2 (4-103)||(3803517-3803616)
chr2 (50-169)||(24749620-24749739)
chr2 (4-113)||(38945752-38945862)
chr2 (55-170)||(1096528-1096643)
chr2 (55-169)||(1149406-1149520)
chr2 (4-169)||(7262970-7263142)
chr2 (59-170)||(34639343-34639454)
chr2 (4-62)||(435409-435468)
chr2 (4-68)||(41183171-41183236)
chr2 (55-169)||(25964738-25964859)
chr2 (51-169)||(3943213-3943330)
chr2 (4-62)||(39794030-39794088)
chr2 (4-68)||(41008875-41008940)
chr2 (4-48)||(43950191-43950235)
chr2 (55-110)||(3795330-3795385)
chr2 (83-170)||(23786057-23786144)
chr2 (55-126)||(25184855-25184925)
chr2 (55-170)||(43870146-43870261)
chr2 (55-154)||(45475389-45475488)
chr2 (55-169)||(7189976-7190089)
chr2 (3-68)||(18003218-18003284)
chr2 (5-51)||(45475519-45475565)
chr2 (55-166)||(2917620-2917731)
chr2 (55-166)||(19187248-19187359)
chr2 (4-51)||(24607526-24607573)
chr2 (4-61)||(27276325-27276379)
chr2 (3-68)||(41560065-41560132)
chr2 (83-154)||(42177267-42177338)
chr2 (55-134)||(43943658-43943737)
chr2 (3-68)||(213398-213464)
chr2 (3-53)||(10624411-10624461)
chr2 (55-169)||(35493366-35493480)
chr2 (83-169)||(41181371-41181457)
chr2 (56-166)||(45137459-45137569)
chr2 (12-68)||(12908384-12908441)
chr2 (3-55)||(5334637-5334689)
chr2 (5-68)||(19187171-19187235)
chr2 (51-171)||(41500255-41500375)
chr2 (51-126)||(12905526-12905601)
chr2 (55-154)||(41008953-41009051)
chr2 (55-169)||(23347353-23347466)
chr2 (51-108)||(41004524-41004580)
chr2 (83-172)||(43950294-43950383)
chr2 (128-168)||(29090544-29090584)
chr2 (5-68)||(34921707-34921771)
[»] scaffold0341 (2 HSPs)
scaffold0341 (50-170)||(17371-17491)
scaffold0341 (4-68)||(17300-17363)
[»] scaffold0361 (2 HSPs)
scaffold0361 (64-170)||(4434-4540)
scaffold0361 (4-68)||(4348-4412)
[»] scaffold0260 (1 HSPs)
scaffold0260 (3-113)||(11770-11881)
[»] scaffold0494 (2 HSPs)
scaffold0494 (55-169)||(765-879)
scaffold0494 (4-68)||(918-982)
[»] chr6 (25 HSPs)
chr6 (4-113)||(18347031-18347141)
chr6 (5-126)||(23985955-23986077)
chr6 (55-172)||(31768684-31768801)
chr6 (5-166)||(13479663-13479828)
chr6 (64-169)||(29065674-29065779)
chr6 (64-169)||(29074687-29074792)
chr6 (64-169)||(29079451-29079556)
chr6 (64-169)||(29107260-29107365)
chr6 (55-169)||(28362756-28362873)
chr6 (55-169)||(29061230-29061344)
chr6 (55-171)||(14012400-14012515)
chr6 (4-62)||(18606111-18606170)
chr6 (4-68)||(13388655-13388720)
chr6 (4-68)||(28249946-28250011)
chr6 (55-103)||(31146373-31146421)
chr6 (5-68)||(31146434-31146498)
chr6 (4-51)||(7363264-7363311)
chr6 (55-170)||(18605978-18606092)
chr6 (3-53)||(1612693-1612743)
chr6 (55-146)||(18610231-18610321)
chr6 (55-166)||(23958827-23958938)
chr6 (5-70)||(16192828-16192894)
chr6 (5-51)||(26701898-26701943)
chr6 (89-170)||(11687951-11688032)
chr6 (5-54)||(24218095-24218143)
[»] scaffold0219 (1 HSPs)
scaffold0219 (4-102)||(15704-15803)
[»] scaffold0176 (2 HSPs)
scaffold0176 (85-169)||(3580-3664)
scaffold0176 (55-161)||(764-870)
[»] scaffold0184 (1 HSPs)
scaffold0184 (50-169)||(17965-18084)
[»] scaffold0078 (1 HSPs)
scaffold0078 (50-169)||(54760-54879)
[»] scaffold0794 (1 HSPs)
scaffold0794 (4-68)||(5332-5397)
[»] scaffold1379 (1 HSPs)
scaffold1379 (55-171)||(459-575)
[»] scaffold0744 (1 HSPs)
scaffold0744 (4-68)||(371-435)
[»] scaffold2089 (1 HSPs)
scaffold2089 (5-71)||(287-354)
[»] scaffold0012 (2 HSPs)
scaffold0012 (55-169)||(232482-232596)
scaffold0012 (105-169)||(232897-232961)
[»] scaffold0147 (1 HSPs)
scaffold0147 (4-60)||(808-865)
[»] scaffold0201 (1 HSPs)
scaffold0201 (59-116)||(22390-22447)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-68)||(50108-50173)
[»] scaffold1500 (1 HSPs)
scaffold1500 (83-154)||(812-883)
[»] scaffold0388 (1 HSPs)
scaffold0388 (32-126)||(11711-11806)
[»] scaffold0513 (1 HSPs)
scaffold0513 (59-108)||(8194-8243)


Alignment Details
Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 23443080 - 23443246
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23443080 aaaatagtgtgtagggggagcaggtggttgtttcatctgatgaaacattctctcggcagttaactgcagccggaattcaaattcctcggcagttaactgc 23443179  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
     |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  23443180 cgagggggtaaaatcgtattttactagtgtgtcacagccttatcaaatgtgggaacaacaattctca 23443246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 2745179 - 2745337
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    |||| ||| |||||||||||| | |||||||||||| |||||||||| |    
T  2745179 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacagaccctcgacagttaactgcagccgaatttcaaattcctcagcagttaactac 2745278  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaac 162  Q
     |||||||||||||||||||||||| ||||| ||||  ||||||| |||||||||||||    
T  2745279 cgagggggtaaaatcgtattttattggtgtgacacaaccttatcacatgtgggaacaac 2745337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 36817555 - 36817661
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||  ||||||| ||||||||||||||    
T  36817555 taactgcagccggagttcaaattcctcggtagttaactgctgagggggtaaaatagtattttactagtgtggcacaaccttatcacatgtgggaacaaca 36817654  T
Q  164 attctca 170  Q
    |||||||    
T  36817655 attctca 36817661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 50953401 - 50953292
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||  |||||||||| |    
T  50953401 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaatatttcctcggcagttaactgcagccggatttcaaattcctatgcagttaactac 50953302  T
Q  104 agagggggta 113  Q
     |||||||||    
T  50953301 cgagggggta 50953292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 7843037 - 7843156
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||| |||||| |||||| |||||||| || |||||||||| ||||||||    
T  7843037 atttcctctgcagttaactgcagtcggaattcaaatttctcggcagttaactgccgaggggataaaattgtattttactaatgtggcacagccttatcaa 7843136  T
Q  150 atgtgggaacaacaattctc 169  Q
    ||| ||||||||||||||||    
T  7843137 atgagggaacaacaattctc 7843156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 41137766 - 41137652
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| || || | |||| | ||||||| ||||||||||||  |||||||||||||    
T  41137766 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgatggagcaaaaacatattttactagtgtggcacaaccttatcaaatgtg 41137667  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  41137666 ggaacaacaattctc 41137652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 7841169 - 7841053
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||| ||||||| || |||||||||||||| |||||| ||| ||||||| ||||| |||||||| ||||||| ||||| |||||||||||||    
T  7841169 ctcggcagttaaatgcagccagatttcaaattcctcggtagttaattgccgagggggcaaaattgtattttactagtgtgacacagccttatcaaatgtg 7841070  T
Q  155 ggaacaacaattctcaa 171  Q
    ||||||| |||||||||    
T  7841069 ggaacaataattctcaa 7841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 48250894 - 48251009
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||  ||||||  |||||||||  |||||  ||||||    
T  48250894 ctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaacgtcatttatttatgtggcacaaccttatgtaatgtg 48250993  T
Q  155 ggaacaacaattctca 170  Q
    ||||||||||||||||    
T  48250994 ggaacaacaattctca 48251009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 49219816 - 49219930
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||| | |||| || ||||| |||||||| ||||||||||||| ||||||||||||     
T  49219816 ctcggcagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattgtattttactagtgtggcacagccttatcaaatgta 49219915  T
Q  155 ggaacaacaattctc 169  Q
    ||| || ||||||||    
T  49219916 ggagcagcaattctc 49219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 48250817 - 48250881
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  48250817 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacattttctcggcagttaact 48250881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 50216874 - 50216995
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    ||||||||||||| |||||||||||||| ||  |||||||||||||||||||||  | |||| |||| |||   ||| | ||||| ||||  ||||||||    
T  50216874 attttctcggcagttaactgcagccggatttttaattcctcggcagttaactgccaatggggcaaaaacgtcaattactcgtgtgccacaaccttatcaa 50216973  T
Q  150 atgtgggaacaacaattctcaa 171  Q
    ||||||||||||||||||||||    
T  50216974 atgtgggaacaacaattctcaa 50216995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 49217101 - 49217043
Alignment:
Q  113 aaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  49217101 aaaatcgtattttactagtgtggcacaatcttatcaaatgtgggaacaacaattctcaa 49217043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 14398660 - 14398596
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||    
T  14398660 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaact 14398596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 7247913 - 7248000
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||| ||||| | ||| |||||| ||||||  ||||||||||||||    
T  7247913 aattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgtgcctcagccttatccaatgtgtcaacaacaattctca 7248000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 14398583 - 14398517
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgta 121  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || |||| | ||||||||||    
T  14398583 ctcggcagttaactgcagccggaattcaaattcctcggcagttaaccgccgaggagataaaatcgta 14398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 50957691 - 50957749
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  50957691 ctcggcagttaactgcagccggatttcaaattcctcggcagctaactgcagagggggta 50957749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29929552 - 29929487
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  29929552 aaaatagtgtgtagggggagcaggtgactgtttcatatgatgaaacatatttctcggcagttaact 29929487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29978706 - 29978641
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  29978706 aaaatagtgtgtagggggagcaggtgactgtttcatatgatgaaacatatttctcggcagttaact 29978641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 2743446 - 2743391
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  2743446 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 2743391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 13743341 - 13743286
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  13743341 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 13743286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 8160941 - 8161015
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt-tctcggcagctaactgcagccgg 76  Q
    ||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||||| ||||||| |||||    
T  8160941 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttctctcggcagttaactgccgccgg 8161015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 46989595 - 46989481
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||| |||| |||  |||| | || || ||||  ||||| |||||||    
T  46989595 ctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaacgtcatttactcgtatgacacaaccttattaaatgtg 46989496  T
Q  155 ggaacaacaattctc 169  Q
      |||||||||||||    
T  46989495 taaacaacaattctc 46989481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 9473943 - 9474025
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    |||||||||||||||||||  |||| |||||||||||||||| | ||||||||||| ||||||| ||    ||||||||||||||||    
T  9473943 ttcctcggcagttaactgccaagggagtaaaatcgtattttactggtgtggcacagccttatcacat----gaacaacaattctcaa 9474025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 13747666 - 13747731
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||    
T  13747666 aaaatagagtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaact 13747731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 66952 - 66841
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    ||||||||| || |||||||||||||  || || | ||||||||||||||||| ||||||| |||| ||||||||| | ||||| | ||| |||||||||    
T  66952 ttttctcggtagttaactgcagccggttttgaa-tacctcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagccttatcaaa 66854  T
Q  151 tgtgggaacaaca 163  Q
    ||||  |||||||    
T  66853 tgtgtcaacaaca 66841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 6505923 - 6506031
Alignment:
Q  4 aaaatagtgtgtaggggg-agcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaact 101  Q
    |||||||| ||||||||| |||| ||| ||||||||||||||||||||| || |||||||| |||||||||||||  |   ||||||| |||||||||||    
T  6505923 aaaatagtatgtaggggggagcatgtggctgtttcatctgatgaaacatattcctcggcagttaactgcagccggtttcttaattccttggcagttaact 6506022  T
Q  102 gcagagggg 110  Q
     | ||||||    
T  6506023 tctgagggg 6506031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 36817470 - 36817533
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||| |||||    
T  36817470 aaaatagtgtgtagggg-agcaggtggctgtttcatccgatgaaacatttcctcggcagttaact 36817533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 7837721 - 7837674
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  7837721 aaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacat 7837674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 21956152 - 21956203
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc 55  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  21956152 aaaatagtatgtagggggtgcaggtgactgtttcatctgatgaaacattttc 21956203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 14402995 - 14403109
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||| | |||||| ||||||||||||||||||||||||| ||||||| ||||  |||   || | ||||||||||| |||||  || |||    
T  14402995 ctcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacagccttatgtaaagtg 14403094  T
Q  155 ggaacaacaattctc 169  Q
      |||||||||||||    
T  14403095 taaacaacaattctc 14403109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 30947599 - 30947649
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  30947599 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattt 30947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 34691673 - 34691560
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||| ||| |||||||||||||| ||  | ||||||||||||||||||| |||| || ||||| |||||||| ||||||  | |||  |||||||||||     
T  34691673 ctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtattttactagtgtttctcagcgttatcaaatgt- 34691575  T
Q  155 ggaacaacaattctc 169  Q
    |||||| ||||||||    
T  34691574 ggaacatcaattctc 34691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 46993178 - 46993244
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgc 70  Q
    |||||| | |||| |||||||||||| ||||||||||||||||||||||| |||| ||| |||||||    
T  46993178 aaaataatatgtaaggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaactgc 46993244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 6740952 - 6740895
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    ||||||| ||| | |||||||| ||||||||||||||||||||||||| |||||||||    
T  6740952 tcggcagttaatttcagccggatttcaaattcctcggcagttaactgccgagggggta 6740895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 29918288 - 29918353
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||| |||  |||||| ||||||||||| |||||    
T  29918288 aaaatagtgtgtagggggagcaggtgactgtttcatatgagaaaacatatttctcggcagttaact 29918353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 29967441 - 29967506
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||| |||  |||||| ||||||||||| |||||    
T  29967441 aaaatagtgtgtagggggagcaggtgactgtttcatatgagaaaacatatttctcggcagttaact 29967506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 46993226 - 46993311
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||||| ||||||||||| ||||||| |||| |||  |||| | || |||||||| ||||||||||||| ||||| |||||||||    
T  46993226 ttcctcgacagttaactgccgagggggcaaaaacgtcatttactcgtatggcacagccttatcaaatgtgtgaacagcaattctca 46993311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 54964917 - 54965002
Alignment:
Q  85 ttcctcggcagttaactgcaga-gggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||| |||||||| || || |||||| |||||||||||||||||| |  | ||  ||||||||||||||||||||||||||||    
T  54964917 ttcctcgacagttaaccgccgaagggggtcaaatcgtattttattagtatttctcaaccttatcaaatgtgggaacaacaattctc 54965002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 2432996 - 2433084
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||||||| ||||||||||| |||||| ||||| ||||||||| | ||||| | ||| |||||  ||||||  |||||||||||||||    
T  2432996 aattcctcgacagttaactgccgaggggataaaagcgtattttactcgtgtgcctcagccttatgcaatgtgtcaacaacaattctcaa 2433084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 16444721 - 16444677
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaa 48  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  16444721 aaaatagagtgtagggggagcaggtggctgtttcatctgatgaaa 16444677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 34694455 - 34694515
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagaggggg 111  Q
    |||||||||||| | |||||||||||| ||| ||||||||| ||||||||||| |||||||    
T  34694455 ttttctcggcagtttactgcagccggatttctaattcctcgacagttaactgccgaggggg 34694515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 44227125 - 44227061
Alignment:
Q  107 gggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||| |||||||||||||| | ||||  | ||||||||||||||||| ||||||||||||||||    
T  44227125 gggggcaaaatcgtattttactcgtgttcctcagtcttatcaaatgtgtgaacaacaattctcaa 44227061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 55385185 - 55385069
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | ||||||||||||||| ||||||| |||| |||   ||| | ||||| ||||  |||||  ||||||    
T  55385185 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcaattactcgtgtgccacaaccttatgcaatgtg 55385086  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||| ||||    
T  55385085 ggaacaacaattttcaa 55385069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 4002530 - 4002585
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||| ||||||    
T  4002530 ctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccgagggg 4002585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 7842964 - 7843015
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc 55  Q
    |||||| |||||||| |||||||||| |||||||||| ||||||||||||||    
T  7842964 aaaataatgtgtaggaggagcaggtggctgtttcatccgatgaaacattttc 7843015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 19341619 - 19341674
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    ||||| || |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  19341619 ctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgagggg 19341674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 28611125 - 28611224
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  ||  |||| |||||||||||||||| ||||||| |||||  ||||||| | ||||| | ||| ||||| |||||||    
T  28611125 ctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttacttgtgtgtctcagccttatgaaatgtg 28611224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 41803046 - 41802975
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||||||||  || |||||| ||||||||||||||| ||| ||| |||| |||||||||    
T  41803046 ctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtatttta 41802975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 42756207 - 42756136
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||| ||||| ||  ||||||||| ||||||||||| ||||||| |||| |||||||||    
T  42756207 ctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtatttta 42756136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 51696571 - 51696654
Alignment:
Q  86 tcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||||||||||||||| | ||||||| ||||  |||  ||| | ||||| ||||| |||||||||||||| |||||||||||||    
T  51696571 tcctcggcagttaactaccgagggggcaaaaaagtaaattactcgtgtgccacagccttatcaaatgtggcaacaacaattctc 51696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 3948856 - 3948806
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  3948856 aaaaatagtgtgtagggggagcaggtagcagtttcatcggatgaaacattt 3948806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 43478855 - 43478969
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | || |||||||||||| ||||||  |||| | |  |||| | ||||||||||  |||||  ||||||    
T  43478855 ctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccgaggggacaaaaacatcatttactcgtgtggcacaaccttatgtaatgtg 43478954  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  43478955 ggaacaacaattctc 43478969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 9429796 - 9429861
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||| ||||||||||||||||||||   ||||||||| ||||||||||||| |||||||| |||||    
T  9429796 aaaacagtgtgtagggggagcaggtagttgtttcatcggatgaaacattttcctcggcagttaact 9429861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 9429883 - 9429932
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||||||  | ||||||||||||||||||||||||| |||||||||    
T  9429883 taactgcagccaaatttcaaattcctcggcagttaactgccgagggggta 9429932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 13747747 - 13747796
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagg 108  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| ||||    
T  13747747 gcagttaactgcagccggatttcaaattcatcggcagttaactgccgagg 13747796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 5136559 - 5136519
Alignment:
Q  130 gtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  5136559 gtgtggcacagtcttatgtaatgtgggaacaacaattctca 5136519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 9582659 - 9582623
Alignment:
Q  18 ggggagcaggtgtctgtttcatctgatgaaacatttt 54  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9582659 ggggagcaggtggctgtttcatctgatgaaacatttt 9582623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 16647167 - 16647287
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||| ||| ||  | ||||||||||||||| ||||||| |||| |||    || | ||||| || |  |||||  |    
T  16647167 atttcctcggcagttaactgcagccggatttctaaaacatcggcagttaactgccgagggggcaaaaacgtcaagtactcgtgtgccagaaccttatgca 16647266  T
Q  150 atgtgggaacaacaattctca 170  Q
    |||||||||||||||||||||    
T  16647267 atgtgggaacaacaattctca 16647287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 41579749 - 41579865
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||   |  |||||||| ||| |||||||| ||||||| |||||||||||||| |  |||| | ||| |||||  || |||    
T  41579749 ctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttacttatgtgcctcagccttatgcaacgtg 41579848  T
Q  155 ggaacaacaattctcaa 171  Q
      |||||||||||||||    
T  41579849 tcaacaacaattctcaa 41579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 29918366 - 29918437
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||||||||  ||| ||||  ||||||||||| ||| ||||||  ||||||||||||||    
T  29918366 ctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtatttta 29918437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 29967519 - 29967590
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||||||||  ||| ||||  ||||||||||| ||| ||||||  ||||||||||||||    
T  29967519 ctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtatttta 29967590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 43476240 - 43476125
Alignment:
Q  55 ctcggcagctaactgcagccggaatt-caaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgt 153  Q
    |||||||| |||||||||||||| || | ||  | ||||||||||||| | ||||||| |||| |||  |||| | ||||||||||  |||||  |||||    
T  43476240 ctcggcagttaactgcagccggattttctaaaacttcggcagttaacttccgagggggcaaaaacgtcatttactcgtgtggcacaaccttatgtaatgt 43476141  T
Q  154 gggaacaacaattctc 169  Q
    | ||||||||||||||    
T  43476140 gagaacaacaattctc 43476125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 49609435 - 49609316
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtc-ttatcaa 149  Q
    |||||||| ||  ||||||| |||| | ||||||||||||| || ||||||   || || | ||||| ||||||||||| |||||||||| | ||||| |    
T  49609435 ttttctcgacaattaactgcggccgaatttcaaattcctcgacaattaactatcgaaggagcaaaattgtattttattaatgtggcacagcctttatcta 49609336  T
Q  150 atgtgggaacaacaattctc 169  Q
    | ||| ||||||||||||||    
T  49609335 aggtgagaacaacaattctc 49609316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 11380461 - 11380375
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||||||||||||| || |||| |||| ||||||||| | ||||  | ||| || | ||||||||  |||||||||||||    
T  11380461 aattcctcggcagttaactgccgaaggggcaaaaacgtattttactcgtgtttctcagcctaaccaaatgtgtcaacaacaattctc 11380375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 48888788 - 48888684
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||  ||||||||||||| ||||||| ||||||| |    ||||||||| | ||||| | ||||||||| |||| ||    
T  48888788 ctcggcagttaactgcagccggatttttaattcctcggcag-taactgccgagggggcatttacgtattttacttgtgtgcctcagtcttatgaaatatg 48888690  T
Q  155 ggaaca 160  Q
     |||||    
T  48888689 tgaaca 48888684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 26245309 - 26245269
Alignment:
Q  130 gtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||||||||| | ||||||| |||||||||||||||||||    
T  26245309 gtgtggcacagccatatcaaaagtgggaacaacaattctca 26245269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 28611048 - 28611112
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||  || |||||| || |||||||||||  |||||||||| |||||    
T  28611048 aaatagtgtgtagggggagcatctggctgttttatttgatgaaacataattctcggcagttaact 28611112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 47070441 - 47070401
Alignment:
Q  130 gtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||| |||||||||||  ||||||||||||||||||||||    
T  47070441 gtgtgccacagtcttatgcaatgtgggaacaacaattctca 47070401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 51807041 - 51806957
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||||||||||||||||||||  ||  | ||||||||||||| | ||||  |  || |||||||||||||||| || ||||||||    
T  51807041 ttcctcggcagttaactgcagccggaattaaatcgtattttactcgtgtttctaagccttatcaaatgtgggagcagcaattctc 51806957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 11400 - 11235
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  11400 aaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggaagttaactgcagccggaattcaaattcctcggcagttaactgc 11301  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
     |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  11300 cgagggggtaaaatcgtattttactagtgtggcacagccttatcaaatgtgggaacagcaattctc 11235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 15980 - 16034
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagaggg 109  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||| |||||    
T  15980 ctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgaggg 16034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 29593302 - 29593467
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||     
T  29593302 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactgcagccggaattcaaattcctcggcagttaactgt 29593401  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
     ||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  29593402 cgagggggtaaaattgtattttactagtgtggcacaaccttatcaaatgtgggaacaacaattctc 29593467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 618698 - 618805
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  618698 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 618797  T
Q  103 cagagggg 110  Q
    | ||||||    
T  618798 ccgagggg 618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 42499457 - 42499343
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| |||| |||||||||||||||| |||||||  || ||||||||||||||||||| | ||||| ||||  ||||||| |||||    
T  42499457 ctcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaaggggtaaaatcgtattttactggtgtgacacaaccttatcacatgtg 42499358  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  42499357 ggaacaacaattctc 42499343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 47741863 - 47741787
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaatt 80  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  47741863 aaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaactgcagccggaatt 47741787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 27453614 - 27453735
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||| ||  ||||||||||||||||||||| ||||||| ||| |||||||||| |  |||  |  || ||||||||    
T  27453614 atttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagccttatcaa 27453713  T
Q  150 atgtgggaacaacaattctcaa 171  Q
    ||||| ||||||||||||||||    
T  27453714 atgtgtgaacaacaattctcaa 27453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 43686906 - 43686989
Alignment:
Q  88 ctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    |||||||||||||| | ||| ||| |||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||    
T  43686906 ctcggcagttaactactgagagggcaaaatcgtattttactagtgtggcacaaccttatcaaatgtgggaacagcaattctcaa 43686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 47776380 - 47776265
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||||| || ||  |||| |||||||||||||||  ||||||| |||||||||||||| | ||||  | ||| |||||||||||||    
T  47776380 ctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatcaaatgtg 47776281  T
Q  155 ggaacaacaattctca 170  Q
    |||||| |||||||||    
T  47776280 ggaacatcaattctca 47776265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 40590549 - 40590630
Alignment:
Q  88 ctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||||||||||||||| ||||||| |||| ||||||||||| ||||  | ||| ||||||||||||||||||||||||||||    
T  40590549 ctcggcagttaactgccgagggggcaaaaacgtattttattcgtgtttctcagccttatcaaatgtgggaacaacaattctc 40590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 34142655 - 34142739
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||||||||||||||||||  |||||| |||||||||||||| ||||||| |||   |||||| |||||||||||||||||||||    
T  34142655 ttcctcggcagttaactgcctagggggaaaaatcgtattttactagtgtgccactaccttatcgaatgtgggaacaacaattctc 34142739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 45361701 - 45361584
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||||||||||| ||  ||||||||| ||||||||||| ||||| | |||| | ||||||| |  |||  |  || |||||||||    
T  45361701 ttttctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgtttcttagccttatcaaa 45361602  T
Q  151 tgtgggaacaacaattct 168  Q
    ||||||||||||||||||    
T  45361601 tgtgggaacaacaattct 45361584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 42499534 - 42499470
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||    
T  42499534 aaaataatgtgtagggggagcaggtgactgtttcatctgatgaaacatatcctcggcagttaact 42499470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 46738854 - 46738734
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||||||||||| ||| ||  | ||||||||||||||| ||| ||| |||| |||  |||  | ||||||||||  |||||  ||    
T  46738854 ttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagagggcaaaaacgtcatttgctcgtgtggcacaaccttatgtaa 46738755  T
Q  151 tgtgggaacaacaattctcaa 171  Q
    |||||||||||||||||||||    
T  46738754 tgtgggaacaacaattctcaa 46738734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 36186498 - 36186608
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||| ||||  ||| |||||||||||| |||||||| ||||||| |||| ||||||||| | ||||| ||||| |||||  ||||||    
T  36186498 ctcggcagttaactgcaaccggt-ttcgaattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagccttatgcaatgtg 36186596  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  36186597 tcaacaacaatt 36186608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 34139945 - 34139839
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||||| | | || |||| |||| ||||  ||| | ||||| ||||  |||||||||||||    
T  34139945 ctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtg 34139846  T
Q  155 ggaacaa 161  Q
    |||||||    
T  34139845 ggaacaa 34139839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 161
Target Start/End: Original strand, 34742420 - 34742526
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| | || ||| ||||||||| || |||||||| ||||| | |||| ||||  ||| | ||||| ||||| |||||||||||||    
T  34742420 ctcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgagggagaaaaaacgtaaattactcgtgtgccacagccttatcaaatgtg 34742519  T
Q  155 ggaacaa 161  Q
    |||||||    
T  34742520 ggaacaa 34742526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 5537920 - 5537800
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagaggg------ggtaaaatcgtattttattagtgtggcacagtcttatca 148  Q
    |||||||| |||||||||||| | ||| ||||||||||||| ||||||| ||| |      |  |||| ||||  ||||| ||||| ||||| |||||||    
T  5537920 ctcggcagttaactgcagccgaatttctaattcctcggcagctaactgccgagagccgagagacaaaaacgtaaattattcgtgtgccacagccttatca 5537821  T
Q  149 aatgtgggaacaacaattctc 169  Q
    |||||||||||||||||||||    
T  5537820 aatgtgggaacaacaattctc 5537800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 18105499 - 18105434
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||||||||||||||||||||   ||||||||| ||||||||||||| |||||||| |||||    
T  18105499 aaaatagtgtgtagggggagcaggtagttgtttcatcggatgaaacattttcctcggcagttaact 18105434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 39460606 - 39460485
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| ||| |||| |||||||||||||| ||  |||||||||||| | |||||| ||| || ||||||||||||||| | ||||  | ||  ||||||||    
T  39460606 atttcctcagcagttaactgcagccggatttttaattcctcggcaatcaactgccgagaggataaaatcgtattttactcgtgtttctcaaccttatcaa 39460507  T
Q  150 atgtgggaacaacaattctcaa 171  Q
    ||||   |||||||||||||||    
T  39460506 atgtataaacaacaattctcaa 39460485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 43624092 - 43624157
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    ||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||||| || |||||    
T  43624092 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacatttcctcggtagttaact 43624157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 47061052 - 47060987
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||||| |||  ||||| ||||||||||||||||||||| ||||||||||| |||||    
T  47061052 aaaatagtgtgtaggaggaagaggtggctgtttcatctgatgaaacatatttctcggcagttaact 47060987  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 9494831 - 9494942
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  ||  ||||||||||||||||||||| ||||||| | |  | ||||||| | ||||| | ||| ||||| |||||||    
T  9494831 ctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgtgcctcagccttatgaaatgtg 9494930  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  9494931 tcaacaacaatt 9494942  T

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Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 28980199 - 28980313
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgg 155  Q
    ||||||| |||||||| |||||  |  ||||| ||||||| ||||||| ||||||| |||| ||||||||| | ||||| | ||| |||||  ||||||     
T  28980199 tcggcagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtgt 28980298  T
Q  156 gaacaacaattctca 170  Q
     ||||||||||||||    
T  28980299 caacaacaattctca 28980313  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 30786652 - 30786602
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    |||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  30786652 aaaaatagtgtgcagggggagcaggtagctgtttcatcggatgaaacattt 30786602  T

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Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 43033101 - 43033051
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  43033101 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 43033051  T

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Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 45763507 - 45763457
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  45763507 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 45763457  T

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Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 46740675 - 46740634
Alignment:
Q  128 tagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  46740675 tagtgtgtcacagccttatcaaatgtgggaacaacaattctc 46740634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 47741778 - 47741714
Alignment:
Q  105 gagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||| |||| ||||||||| ||||||||||||  |||||  |||||| ||||||||||||||    
T  47741778 gagggggcaaaaacgtattttactagtgtggcacaaccttatgtaatgtgagaacaacaattctc 47741714  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 42025138 - 42025209
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    ||||||||||||||||||| |||||||||||   | |||||||||||||||    ||| |||||||||||||    
T  42025138 aattcctcggcagttaactacagagggggtattttggtattttattagtgtttatcagccttatcaaatgtg 42025209  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 30355264 - 30355378
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||||||   ||  ||||| || ||| |||||||| ||||||| |||| ||||||||| | ||||  | ||||| ||| |||||||    
T  30355264 ctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtattttactcgtgtttctcagtcatatgaaatgtg 30355363  T
Q  155 ggaacaacaattctc 169  Q
      |||||||||||||    
T  30355364 tcaacaacaattctc 30355378  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 45350955 - 45350897
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| |||||||||||||  ||    |||||||||||||||||||||||||||||    
T  45350955 ctcggcagttaactgcagccggttttatttttcctcggcagttaactgcagagggggta 45350897  T

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Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 46740594 - 46740632
Alignment:
Q  131 tgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  46740594 tgtgtcacagccttatcaaatgtgggaacaacaattctc 46740632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 46863373 - 46863483
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaa 158  Q
    |||| |||||||||||||  ||  |||| |||||||||||||||| || |||| |||| ||||||||| | ||||| | ||| |||||  |||| |  ||    
T  46863373 gcagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaa 46863472  T
Q  159 caacaattctc 169  Q
    |||||||||||    
T  46863473 caacaattctc 46863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 10708229 - 10708269
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatg 45  Q
    |||||||||||||| |||||||||| ||||||||| |||||    
T  10708229 aaatagtgtgtaggaggagcaggtggctgtttcatttgatg 10708269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 29592590 - 29592530
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaa 116  Q
    ||||||| ||| ||||| |||| ||||||||||||| |||||||||||  |||||| ||||    
T  29592590 tcggcagttaattgcagtcggatttcaaattcctcgacagttaactgccaagggggcaaaa 29592530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 40323240 - 40323200
Alignment:
Q  131 tgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  40323240 tgtggcacagccttatgtaatgtgggaacaacaattctcaa 40323200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 48829961 - 48829897
Alignment:
Q  105 gagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||| |||| ||||  ||| | ||||| ||||  ||||||||||||||||||||||||||||    
T  48829961 gagggggcaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaattctc 48829897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 23913956 - 23913790
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  23913956 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcagcagttaactgcagccggaattcaaattcctcggtagttaactgc 23913857  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
     |||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||    
T  23913856 tgagggggtaaaatcgtattttactagtgtggcacaaccttatcacatgtgggaacaacaattctca 23913790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 5078040 - 5077875
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||| ||| ||||||||||||    
T  5078040 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactgcagtcggatttcaaatttctcagcagttaactgc 5077941  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
     |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  5077940 cgagggggtaaaatcgtattttactggtgtggcacagccttatcacatgtgggaacaacaattctc 5077875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 44465696 - 44465528
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||    
T  44465696 aaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagtaaactgcagccggaattcaaattcctcggtagttaactg 44465597  T
Q  103 cagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    | |||||||||||||||||||||| |||| |||||||  ||||||| ||||||||||||||||||||||    
T  44465596 ccgagggggtaaaatcgtattttactagtatggcacaaccttatcacatgtgggaacaacaattctcaa 44465528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 30905869 - 30905704
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  30905869 aaaatagtgtgtaggggg-gcaggtggctgtttcatctgatgaaacattccctcggcagttaactgcagccggatttcaaatttctcggcagttaactgc 30905771  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
     |||||| ||||||||||||||| | ||||||||||| ||||||| ||||||||||| |||||||||    
T  30905770 cgaggggataaaatcgtattttactggtgtggcacagccttatcacatgtgggaacagcaattctca 30905704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 6562181 - 6562301
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||     
T  6562181 atttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacaaccttatcac 6562280  T
Q  150 atgtgggaacaacaattctca 170  Q
    ||||||||||| |||||||||    
T  6562281 atgtgggaacagcaattctca 6562301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 41453938 - 41453831
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||     
T  41453938 aaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaacta 41453839  T
Q  103 cagagggg 110  Q
    | ||||||    
T  41453838 ccgagggg 41453831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 20349558 - 20349447
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattcaaattcctcggcagttaact 101  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||    
T  20349558 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggtagttaact 20349459  T
Q  102 gcagagggggta 113  Q
    || ||| |||||    
T  20349458 gccgagagggta 20349447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 9711676 - 9711793
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||  ||||| ||| ||||||||||||||||||||| || |||| |||||||||||||| ||||||| ||||  |||||||||||||    
T  9711676 ctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtattttactagtgtgccacaaccttatcaaatgtg 9711775  T
Q  155 ggaacaacaattctcaat 172  Q
    ||||||||||||||||||    
T  9711776 ggaacaacaattctcaat 9711793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 29356638 - 29356732
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattcaaattcctcggcagtt 97  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||| ||| |||||||||||||||||||    
T  29356638 aaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactgcagctggatttcaaattcctcggcagtt 29356732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 48751435 - 48751552
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  |||||||||||||| ||  ||||||||||||||| | ||| |||||||||||||||||||||| ||||||  | ||| |||||||||||||    
T  48751435 ctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtattttactagtgtttctcagccttatcaaatgtg 48751534  T
Q  155 ggaacaacaattctcaat 172  Q
    |||||| |||||||||||    
T  48751535 ggaacatcaattctcaat 48751552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 36683075 - 36683138
Alignment:
Q  177 aatgttttttgtgcaatagggagtctgagactgttgaaatgagacaatgcttttgacaagcttt 240  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36683075 aatgttttttgtgcaatagggagtccgagactgttgaaatgagacaatgcttttgacaagcttt 36683138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 27485111 - 27484993
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||||||||||| ||  ||||||| ||||||||||||| ||||||| |||| ||||||||| | ||||  | ||| |||||||||    
T  27485111 ttttctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaa 27485012  T
Q  151 tgtgggaacaacaattctc 169  Q
    |||||||||| ||||||||    
T  27485011 tgtgggaacagcaattctc 27484993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 4516130 - 4516031
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||  |||||||||| |||||||||||||  ||  |||||||||||||||||||||    
T  4516130 aaatagtgtgtagggggagcaggtggctgtttcatctaataaaacataattctcggcagttaactgcagccggtttttgaattcctcggcagttaactgc 4516031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 37014969 - 37014882
Alignment:
Q  84 attcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    |||||||||||||||||||  ||||||| |||||||||||||| ||||||| ||||   |||||||||||||||||||||||||||||    
T  37014969 attcctcggcagttaactgtcgagggggcaaaatcgtattttactagtgtgccacaacattatcaaatgtgggaacaacaattctcaa 37014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 51289985 - 51290100
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||| ||||| ||  |||||||| | |||||||||| |||||||||||||| ||||||| ||||||  | ||| |||||||||  ||    
T  51289985 ctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccgagggggtaaaatcttattttactagtgtttctcagccttatcaaacatg 51290084  T
Q  155 ggaacaacaattctca 170  Q
    ||||||||||||||||    
T  51290085 ggaacaacaattctca 51290100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 51288931 - 51288821
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaa 158  Q
    |||| |||||||||||||| ||| |||||||||| |||||||||| ||||||| |||| | ||  ||||| ||||| ||||| |||||||||||||||||    
T  51288931 gcagttaactgcagccggatttctaattcctcggtagttaactgccgagggggcaaaaacataaattattcgtgtgccacagccttatcaaatgtgggaa 51288832  T
Q  159 caacaattctc 169  Q
     | ||||||||    
T  51288831 tagcaattctc 51288821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 23276133 - 23276247
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||| ||||||| ||  |||||||| |||||||||||| ||||||| |||| ||||||||| | ||||  | ||| ||||||||||| |    
T  23276133 ctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatgcg 23276232  T
Q  155 ggaacaacaattctc 169  Q
     ||||||||||||||    
T  23276233 tgaacaacaattctc 23276247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 44621065 - 44621131
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgc 70  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||    
T  44621065 aaaatagagtgtagggggagcaggtggctgtttcatctgatgaaacatatcctcggcagttaactgc 44621131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 8460044 - 8460109
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  8460044 aaaatagtgtgtaggggaagcaggtggctgtttcatctgatgaaacatatttctcggcagttaact 8460109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 22397919 - 22397753
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccgg--aattcaaattcctcggcagttaact 101  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||| | |||||||| ||||||| |||||   | |||||  | |||||||||||||    
T  22397919 aaaatagagtgtagggggagcaggtggctatttcatctgatgaaacatatcctcggcagttaactgccgccggtttactcaaa-acttcggcagttaact 22397821  T
Q  102 gcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    || ||  |||||   | |||||||| | ||||||||||| ||||  | | |||||||||||||||||||    
T  22397820 gccga-agggtattttggtattttactcgtgtggcacagccttactatacgtgggaacaacaattctca 22397753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 46973328 - 46973264
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||| |||||    
T  46973328 aaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacataattctcggcagttaact 46973264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 52805558 - 52805674
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  ||||| |||||||| ||||||||| ||||||||||||||| ||||||| ||||   ||  ||| | ||||| ||||  |||||||||||||    
T  52805558 ctcggcaattaactacagccggatttcaaattcgtcggcagttaactgccgagggggcaaaaaaataaattacttgtgtgccacaaccttatcaaatgtg 52805657  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||| ||||||||||    
T  52805658 ggaacatcaattctcaa 52805674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 29438082 - 29438161
Alignment:
Q  92 gcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    |||||||||||| ||||||| |||| ||||  ||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  29438082 gcagttaactgccgagggggcaaaaacgtaaattattcgtgtgccacaaccttatcaaatgtgggaacaacaattctcaa 29438161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 44470036 - 44470091
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  44470036 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggg 44470091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 46973252 - 46973141
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  ||  |||||||||||||||||||||  |||||| |||||||||||||| | ||||| | ||| || || |||||||    
T  46973252 ctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttacttgtgtgtctcagcctaatgaaatgtg 46973153  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  46973152 tcaacaacaatt 46973141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 6557963 - 6557905
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  6557963 ctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggta 6557905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 15047330 - 15047276
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagaggg 109  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  15047330 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 15047276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 30910028 - 30910086
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  30910028 ctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggggta 30910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 31945807 - 31945873
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||    
T  31945807 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaact 31945873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 44596905 - 44596795
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaa 158  Q
    |||| |||||||| ||||| ||| ||  | ||||||||||||||| ||| ||| |||| |||  |||| | |||||||||||||||||  ||||||||||    
T  44596905 gcagttaactgcaaccggatttctaaaacttcggcagttaactgccgagcgggcaaaaacgtcatttactcgtgtggcacagtcttatgtaatgtgggaa 44596806  T
Q  159 caacaattctc 169  Q
    |||||||||||    
T  44596805 caacaattctc 44596795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 9711598 - 9711663
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||    
T  9711598 aaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacatattcctcggcagttaact 9711663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 29434982 - 29434905
Alignment:
Q  94 agttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||||||||  || |||||||| ||||||||||| ||||| | ||||||||| ||||||||||||||| ||||||||    
T  29434982 agttaactgccaagagggtaaaaacgtattttattcgtgtgtctcagtcttattaaatgtgggaacaacgattctcaa 29434905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 50117725 - 50117782
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggca 61  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||    
T  50117725 aaaatagtgtgtagagggagcaggtggctgtttcatctgataaaacatttcctcggca 50117782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 52802178 - 52802117
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaa 116  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||    
T  52802178 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaa 52802117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 6562110 - 6562173
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  6562110 aaaatagtgt-tagagggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaact 6562173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 19499060 - 19499123
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaac 67  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||| |||| ||||    
T  19499060 aaatagtgtgtagggggagcaggtgactctttcatctgatgaaacatatttctctgcagttaac 19499123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 29765554 - 29765669
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||| ||||| ||| ||  | ||||||||||||||| ||||||  |||| |||  |||||| |||||| |||  |||||  ||||||    
T  29765554 ctcggcagttaactgcaaccggatttctaaaacttcggcagttaactgccgaggggacaaaaacgtcatttattcgtgtggtacaaccttatgcaatgtg 29765653  T
Q  155 ggaacaacaattctca 170  Q
    ||||||||||||||||    
T  29765654 ggaacaacaattctca 29765669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 41804058 - 41804169
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| |||  ||  ||||||||||||||||||||| || |||| |||| ||||||||| | ||||| | ||| ||||| |||||||    
T  41804058 ctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgtgcctcagccttataaaatgtg 41804157  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  41804158 tcaacaacaatt 41804169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 35521653 - 35521551
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||  ||  | ||||||||||||||||||| ||| ||| |||||||||||||| | ||||| | ||| ||||| |||||||  |||||||    
T  35521653 taactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaaca 35521554  T
Q  164 att 166  Q
    |||    
T  35521553 att 35521551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 15047408 - 15047343
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||||| ||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||    
T  15047408 aaaatagtgtatagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaact 15047343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 19054197 - 19054262
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||| ||| |||||| || ||||||||||| ||||||||||| |||||    
T  19054197 aaaatagtgtgtagggggagcacgtgactgttttatttgatgaaacatatttctcggcagttaact 19054262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 23359374 - 23359435
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaa 116  Q
    ||||| || |||||||||||||| |||||||||||||||| |||||||| ||||||| ||||    
T  23359374 ctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaa 23359435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 13629517 - 13629473
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaa 48  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13629517 aaaatagagtgtagggggagcaggtggctgtttcatctgatgaaa 13629473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 51271616 - 51271732
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  |||||||||||||| ||| ||  | ||||||||||||||| ||||||| |||| |||  ||||   ||||||||||  |||||  ||| ||    
T  51271616 ctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcatttacccgtgtggcacaaccttatgtaatttg 51271715  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||||||||    
T  51271716 ggaacaacaattctcaa 51271732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 13173961 - 13173894
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgc 70  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||||||||  |||||||||| |||||||    
T  13173961 aaaatagtatgtagggggagtaggtggctgtttcaactgatgaaacataattctcggcagttaactgc 13173894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 46141830 - 46141759
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||||||||   |  ||||||||||||||||||||| ||| ||| ||||||||||||||    
T  46141830 ctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtatttta 46141759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 46886412 - 46886527
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  ||||| |||||||| ||| ||  | ||||||||||||||| ||||||| |||| |||  |||| | |||| |||||  |||||||||||||    
T  46886412 ctcggcacttaactacagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcatttactcgtgtagcacaaccttatcaaatgtg 46886511  T
Q  155 ggaacaacaattctca 170  Q
      ||||||||||||||    
T  46886512 taaacaacaattctca 46886527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 3948408 - 3948458
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  3948408 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 3948458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 3983214 - 3983164
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  3983214 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 3983164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 7981087 - 7981133
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||    
T  7981087 aaatagtgtgtagggggagcaggtggttgtttcatcttatgaaacat 7981133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 11183234 - 11183120
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||  |||||||| |||||||||||   |||| | |||| ||||||||| | || |  | ||| |||||||||||||    
T  11183234 ctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttactcgtatttctcagccttatcaaatgtg 11183135  T
Q  155 ggaacaacaattctc 169  Q
      |||||||||||||    
T  11183134 tcaacaacaattctc 11183120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 19054098 - 19053996
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||  ||  ||||||||||||||||||||  ||||||| |||| ||||||||| | ||||  | ||| ||||| |||||||  |||||||    
T  19054098 taactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaacaaca 19053999  T
Q  164 att 166  Q
    |||    
T  19053998 att 19053996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 37015017 - 37014951
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactg 69  Q
    |||| ||| |||||||||| |||||| ||||||||||||||||||||| || |||||||| ||||||    
T  37015017 aaaaaagtatgtagggggatcaggtggctgtttcatctgatgaaacatattcctcggcagttaactg 37014951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 38776072 - 38776122
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  38776072 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 38776122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 22345313 - 22345261
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    ||||| ||||||| |||||||||||||  |||||||||||||||||||||||||    
T  22345313 attttttcggcagttaactgcagccggt-ttcaaattcctcggcagttaactgc 22345261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 27487665 - 27487775
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||||||  |||||||| ||||    |||| ||||| | |||| ||||  ||| | ||||| ||||  |||||||||||||    
T  27487665 ctcggcagttaactgcagccggaattttaattcctcagcag----ctgccgagggagcaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtg 27487760  T
Q  155 ggaacaacaattctc 169  Q
    |||||| ||||||||    
T  27487761 ggaacatcaattctc 27487775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 8459032 - 8458949
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcaca 139  Q
    |||||||| ||||||||| |||  |||||||||| |||||||||||| | |||||| ||||| ||||||||| | ||||| ||||    
T  8459032 ctcggcagttaactgcagtcggt-ttcaaattccacggcagttaacttctgaggggataaaaacgtattttactcgtgtgacaca 8458949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 13173883 - 13173768
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||| | |||||||||||||  ||  |||||| | |||||||||||| ||||||| ||||| |||||||| | ||||| | ||| ||||| |||||||    
T  13173883 ctcggctgttaactgcagccggtttttgaattcc-cagcagttaactgccgagggggcaaaatagtattttacttgtgtgcctcagccttatgaaatgtg 13173785  T
Q  155 ggaacaacaattctcaa 171  Q
      |||||||||| ||||    
T  13173784 tcaacaacaattttcaa 13173768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 19499137 - 19499246
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||| | || ||||| ||| |||||||||||  ||  ||| |||| ||||||||| | ||||| | ||||||||| | |||||    
T  19499137 ctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcga--gggcaaaaacgtattttacttgtgtgtctcagtcttatgatatgtg 19499234  T
Q  155 ggaacaacaatt 166  Q
     |||||||||||    
T  19499235 cgaacaacaatt 19499246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 21144630 - 21144745
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  ||||||| |||||||||| |||||||  |||||||||||| |||  |  |||| ||||  ||| | ||||| || |  |||||||||||||    
T  21144630 ctcggcacttaactgccgccggaattctaattccttcgcagttaactgccgagaagcaaaaa-cgtaaattagtcgtgtgccagaaccttatcaaatgtg 21144728  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||||||||    
T  21144729 ggaacaacaattctcaa 21144745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 1654870 - 1654823
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||||||||||||||||||||  |||||||||  ||||||||||    
T  1654870 aaaatagtgtgtagggggagcaggtaactgtttcatacgatgaaacat 1654823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 6437594 - 6437681
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaat 172  Q
    ||||||||||||||||||| ||| ||| |||| ||||||||| | ||||| | |||  ||||  ||||||  ||||||||||||||||    
T  6437594 ttcctcggcagttaactgccgagagggcaaaagcgtattttacttgtgtgcctcagctttatgcaatgtgtcaacaacaattctcaat 6437681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 49927534 - 49927609
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||||||| |||||  ||||||  || |||||| ||||||||||||||| ||||||  |||| |||||||||    
T  49927534 ttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtatttta 49927609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 26944452 - 26944410
Alignment:
Q  130 gtgtggcacagtcttatcaaatgtgggaacaacaattctcaat 172  Q
    ||||||||||| |||||  ||||||||||||||||||||||||    
T  26944452 gtgtggcacagccttatgtaatgtgggaacaacaattctcaat 26944410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 36076506 - 36076552
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| ||| |||||| ||||| |||||||||||||||||||||    
T  36076506 aaatagtgcgtatggggagtaggtggctgtttcatctgatgaaacat 36076552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 48749760 - 48749702
Alignment:
Q  111 gtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||| |||||||||||||||  | ||| ||||||||||||||||| | ||||||||    
T  48749760 gtaaaattgtattttattagtgtttctcagccttatcaaatgtgggaatatcaattctc 48749702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 471118 - 471203
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||||||||||||||||| || |||| |||| |||  ||||   | ||||||||  |||||  ||||||||||||||||||||||    
T  471118 ttcctcggcagttaactgccgatggggcaaaaacgtcatttacccgcgtggcacaaccttatgtaatgtgggaacaacaattctca 471203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 1167580 - 1167552
Alignment:
Q  85 ttcctcggcagttaactgcagagggggta 113  Q
    |||||||||||||||||||||||||||||    
T  1167580 ttcctcggcagttaactgcagagggggta 1167552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 26879382 - 26879438
Alignment:
Q  117 tcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaatg 173  Q
    |||||||||| | ||||||||||| | ||  | ||||||||||||||||||||||||    
T  26879382 tcgtattttactggtgtggcacagccatactatatgtgggaacaacaattctcaatg 26879438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 29352307 - 29352259
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||| |||||| ||||||| ||||||||||||| || ||||||||    
T  29352307 ctcggcagttaactggagccggatttcaaattcctcgacaattaactgc 29352259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 32161351 - 32161431
Alignment:
Q  89 tcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||| |||||||||| |  |||| |||| |||  |||| | ||||||||||| |||||  |||||||||||||||||||||    
T  32161351 tcggtagttaactgccgcaggggcaaaaacgtcatttactcgtgtggcacagccttatgtaatgtgggaacaacaattctc 32161431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 38689976 - 38689909
Alignment:
Q  58 ggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    ||||| |||||||||||||  ||| ||||||||| || |||||| | |||||||||||| |||||||||    
T  38689976 ggcagttaactgcagccggt-ttcgaattcctcgacatttaactaccgagggggtaaaagcgtatttta 38689909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 44336297 - 44336249
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||| |||||||||||| | ||| ||||||||| |||||||||||    
T  44336297 ctcggcagttaactgcagccgaatttctaattcctcgacagttaactgc 44336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 27867793 - 27867960
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||    
T  27867793 aaaatagtgtgtagggggagcaggtggttgtttcatcggatgaaacattttcctcggcagtaaactgcagccggaattcaaattcctcggcagttaactg 27867892  T
Q  103 cagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    | |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  27867893 ccgagggggtaaaatcgtattttactagtgtggcacagccttatcacatgtgggaacaacaattctca 27867960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 13568048 - 13568216
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    ||||||||||||||| |||||||||  |||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||     
T  13568048 aaaatagtgtgtaggtggagcaggtagctgtttcatcagatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaacta 13568147  T
Q  103 cagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    | || ||||||||| |||  |||| | || |||||||| |||||  |||||||||||||||||||||||    
T  13568148 ccgatggggtaaaaacgtcatttactcgtatggcacagccttatgtaatgtgggaacaacaattctcaa 13568216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 1035223 - 1035118
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  1035223 taactgcagccgaaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttattagtgtggcacagccttatcacacgtgggaacaaca 1035124  T
Q  164 attctc 169  Q
    ||||||    
T  1035123 attctc 1035118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 39743173 - 39743287
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| || | ||||||||||||||||||||||||  ||||||| |||||| ||||||| ||||||||||||| |||||||||||||    
T  39743173 ctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaatcatattttactagtgtggcacagccttatcaaatgtg 39743272  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  39743273 ggaacaacaattctc 39743287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 34122572 - 34122456
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| || |||| |||||||||||||| || |||||||||  |||||||||| ||    
T  34122572 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtattttactaatgtggcacaaccttatcaaatatg 34122473  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||| ||||    
T  34122472 ggaacaacaattttcaa 34122456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 41798865 - 41798752
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgg 155  Q
    ||||||| |||||||||||||| ||||||||| || |||||||||||| ||||||| |||||| ||||||| ||||||||||| | |||||||| |||||    
T  41798865 tcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatattttactagtgtggcacggccttatcaattgtgg 41798766  T
Q  156 gaacaacaattctc 169  Q
    ||||||||||||||    
T  41798765 gaacaacaattctc 41798752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 25897107 - 25897219
Alignment:
Q  58 ggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtggga 157  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||| || ||||||||||  ||||||| ||||||||||||  ||||||| ||||||||    
T  25897107 ggcagttaactgcagccggagttcaaattcctcggtagttaactgccgaaggggtaaaataatattttactagtgtggcacaaccttatcacatgtggga 25897206  T
Q  158 acaacaattctca 170  Q
    |||||||||||||    
T  25897207 acaacaattctca 25897219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 7021831 - 7021926
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattcaaattcctcggcagtta 98  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||    
T  7021831 aaaatagtgtgtagggggagcaggtggctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcagcagtta 7021926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 28387322 - 28387199
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggc----acagtctta 145  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    | || ||||    
T  28387322 atttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaatcgtattttactagtgtggcatatatagcctta 28387223  T
Q  146 tcaaatgtgggaacaacaattctc 169  Q
    | ||||||||||||| ||||||||    
T  28387222 ttaaatgtgggaacatcaattctc 28387199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 34123963 - 34124073
Alignment:
Q  58 ggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtggga 157  Q
    ||||| |||||||||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||| | ||||||||||  ||||| ||||||||||    
T  34123963 ggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttactggtgtggcacaaccttattaaatgtggga 34124062  T
Q  158 acaacaattct 168  Q
    |||||||||||    
T  34124063 acaacaattct 34124073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 37820827 - 37820920
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattcaaattcctcggcagt 96  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  37820827 aaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagt 37820920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 17966911 - 17967025
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    ||||| || ||||||||| |||| ||  |||| |||||||||||||||| |||||||||||||||||||||| ||||||  | ||| |||||||||||||    
T  17966911 ctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtattttactagtgtttctcagccttatcaaatgtg 17967010  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  17967011 ggaacaacaattctc 17967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 1035309 - 1035245
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  1035309 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaact 1035245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 1397376 - 1397486
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgg 155  Q
    ||||||| |||||||||||||| ||| |||||||| |||||||||||| ||||||| ||||  |||  ||| | ||||| ||||  ||||||||||||||    
T  1397376 tcggcagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaaatgtaaattactcgtgtgccacaaccttatcaaatgtgg 1397475  T
Q  156 gaacaacaatt 166  Q
    |||||||||||    
T  1397476 gaacaacaatt 1397486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 34077844 - 34077762
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattc 167  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||||||||  ||||||  | ||||||||||||||||    
T  34077844 ttcctcggcaattaactaccgagggggtaaaatcgtattttattagtgtggcacaaccttatctcacgtgggaacaacaattc 34077762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 41799793 - 41799907
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgg 155  Q
    ||||||| ||||||||||  || ||| |||||||| |||||||||||  ||||||| ||||  |||  ||| | ||||| ||||||||||||||||||||    
T  41799793 tcggcagttaactgcagctagatttctaattcctcagcagttaactgtcgagggggcaaaaaagtaaattactcgtgtgtcacagtcttatcaaatgtgg 41799892  T
Q  156 gaacaacaattctca 170  Q
    |||||||||||||||    
T  41799893 gaacaacaattctca 41799907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 28387394 - 28387330
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| |||||    
T  28387394 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcatcggcagttaact 28387330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 42942510 - 42942593
Alignment:
Q  89 tcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaat 172  Q
    |||||||||||||||  ||||||||||| ||||||||| | ||||  | ||| |||||||||||||||||||||||||||||||    
T  42942510 tcggcagttaactgccaagggggtaaaagcgtattttacttgtgtttctcagccttatcaaatgtgggaacaacaattctcaat 42942593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 17965897 - 17965781
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| || | ||  ||||||||| || |||||||| |||||| ||||||||||||||| |||||   | ||| ||||||||| |||    
T  17965897 ctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggggataaaatcgtattttactagtgattctcagccttatcaaaagtg 17965798  T
Q  155 ggaacaacaattctcaa 171  Q
    ||||||||||| |||||    
T  17965797 ggaacaacaatcctcaa 17965781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 25897027 - 25897091
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||| |||||    
T  25897027 aaaatagcgtgtagggggagcaggtggctgtttcatcggatgaaacatttcctcggcagttaact 25897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 34077893 - 34077842
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc 55  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  34077893 aaaatagtgtgtagggggagcaggtgactgtttcatcggatgaaacattttc 34077842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 34123870 - 34123925
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcgg 59  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  34123870 aaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacattctctcgg 34123925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 7757373 - 7757259
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | ||||||||||||||  ||||||| |||| |||  |||| | |||||||| ||||||||  ||||||    
T  7757373 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagggggcaaaaacgtcatttactcgtgtggcatagtcttatgtaatgtg 7757274  T
Q  155 ggaacaacaattctc 169  Q
    |||||| ||||||||    
T  7757273 ggaacagcaattctc 7757259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 14279951 - 14279877
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccgg 76  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||| || ||||||| |||||    
T  14279951 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcgggagttaactgccgccgg 14279877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 18538283 - 18538347
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||| |||||    
T  18538283 aaatagtgtgtagggggagcaggtggctgtttcatctaatgaaacataattctcggcagttaact 18538347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 33993405 - 33993341
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||| |||||    
T  33993405 aaatagtgtgtagggggagcaggtggctgtttcaactgatgaaacataattctcggcagttaact 33993341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 18538360 - 18538471
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  ||  ||||||||| || |||||||| ||||||| |||||||||||||| | ||||| | ||| || || |||||||    
T  18538360 ctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttacttgtgtgcctcagcctaatgaaatgtg 18538459  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  18538460 tcaacaacaatt 18538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 28886366 - 28886417
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc 55  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  28886366 aaaatagtgtgtagggggagcaggtagctgtttcatcagatgaaacattttc 28886417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 38860150 - 38860197
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  38860150 aaaatagagtgtagggggagcaggtggctgtttcatctgatgaaacat 38860197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 28388544 - 28388658
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||||  |||   || | ||||||||||| |||||  || |||    
T  28388544 ctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaagagtaaaatactcgtgtggcacagccttatgtaaagtg 28388643  T
Q  155 ggaacaacaattctc 169  Q
      |||||||||||||    
T  28388644 taaacaacaattctc 28388658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 4204158 - 4204223
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||| ||||||||||| |||||    
T  4204158 aaaatagtgtgtagagggagcaggtagttgtttcatctgatgaaacatatttctcggcagttaact 4204223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 11033410 - 11033467
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggca 61  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||| | |||||||    
T  11033410 aaaatagagtgtagggggagcaggtggctatttcatctgatgaaacatatcctcggca 11033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21979691 - 21979646
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaaca 50  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21979691 aaatagtgtgtagggggagcatgtggctgtttcatctgatgaaaca 21979646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 30887385 - 30887501
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| |||||||  ||||||||||||  |||  | |||| ||||  ||| | ||||| ||||   ||||||||||||    
T  30887385 ctcggcagttaactgcagccggatttctaattccttagcagttaactgcctaggaagcaaaaacgtaaattactcgtgtgccacaacgttatcaaatgtg 30887484  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||| ||||    
T  30887485 ggaacaacaattatcaa 30887501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 31098882 - 31098929
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||    
T  31098882 aaaatagtatgtagggggagcagatggctgtttcatctgatgaaacat 31098929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 42537217 - 42537135
Alignment:
Q  87 cctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||||||||| || |||| ||||  |||||||| | ||||  | ||| ||||||||||||| ||||||||||||||    
T  42537217 cctcggcagttaactgccgatggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgtgaacaacaattctc 42537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 43094601 - 43094715
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | ||||||||||||||  || ||||||||| |||  |||| | |||||||| |  |||||||||||||    
T  43094601 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgatggggtaaaaacgtcatttactcgtgtggcataaccttatcaaatgtg 43094700  T
Q  155 ggaacaacaattctc 169  Q
      |||| ||||||||    
T  43094701 taaacagcaattctc 43094715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 25890042 - 25889981
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaa 116  Q
    ||||| || ||||||||| |||| ||||||||||||||||||| ||||| ||||||| ||||    
T  25890042 ctcggtagttaactgcagtcggatttcaaattcctcggcagtttactgctgagggggcaaaa 25889981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 43094053 - 43093940
Alignment:
Q  58 ggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtggga 157  Q
    ||||| |||||||||||||| ||| ||    ||||||||||||||  || ||||||||| |||  |||| | ||||| ||||| |||||||||| ||  |    
T  43094053 ggcagttaactgcagccggatttctaaaatttcggcagttaactgttgaaggggtaaaaacgtcatttactcgtgtgacacagccttatcaaatatgtaa 43093954  T
Q  158 acaacaattctcaa 171  Q
    ||||||||||||||    
T  43093953 acaacaattctcaa 43093940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 20192373 - 20192285
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||| || |||||||||||  || |||| |||||||||||||| | ||||| | ||| ||||| |||||||  |||||||||||||||    
T  20192373 aattcttcagcagttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattctcaa 20192285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 7800934 - 7800981
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||||    
T  7800934 aaaatagtacgtaggaggagcaggtgactgtttcatctgatgaaacat 7800981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 13563715 - 13563660
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    |||||||| |||||||||||||| | || |||| ||||||||||||||| ||||||    
T  13563715 ctcggcagttaactgcagccggattacatattcttcggcagttaactgccgagggg 13563660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 19228671 - 19228782
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||| ||||  ||  ||||| ||||||||||||||| ||||||| |    ||||||||| | ||||| | ||| |||||||||||||    
T  19228671 ctcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtg 19228770  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  19228771 tcaacaacaatt 19228782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 25877669 - 25877555
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||| |||||||||  ||| |||||||||||| |||| ||| || | ||||||| ||||||||| | ||||| ||||  |||||  ||||||    
T  25877669 ctcggcagttaattgcagccggt-ttcgaattcctcggcatttaattgccgaagtggtaaaaacgtattttactcgtgtgacacaaccttatgcaatgtg 25877571  T
Q  155 ggaacaacaattctca 170  Q
      ||||||||||||||    
T  25877570 tcaacaacaattctca 25877555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 540977 - 540892
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||| ||||||  | ||| |||||||||| | |||||| ||||||||||    
T  540977 ttcctcgacagttaactgccgaggaggctaaatcgtattttactagtgtttctcagccttatcaaatat-ggaacagcaattctcaa 540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 18310074 - 18310160
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||| ||||||||||| |||| || |||| ||||||||| | ||||| | ||| |||||  ||||||  |||||||||||||    
T  18310074 aattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaacaacaattctc 18310160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 30354344 - 30354390
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||||| ||||||| ||||||||| ||||||||| |||||||||||    
T  30354344 aaatagtatgtagggtgagcaggtgactgtttcatttgatgaaacat 30354390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 30611259 - 30611173
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||| ||||| ||||||||||  |||||| |||| || |||||| | ||||  | ||| ||||||||||||| ||||||||||||||    
T  30611259 aattgctcggtagttaactgccaagggggcaaaaacgaattttactcgtgtttctcagccttatcaaatgtgtgaacaacaattctc 30611173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 31787571 - 31787501
Alignment:
Q  85 ttcctcggcagtt-aactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    ||||||||||||| |||||| ||||||||||||  ||  |||| | ||||||||||| |||||||||||||    
T  31787571 ttcctcggcagtttaactgccgagggggtaaaaatgtcatttactcgtgtggcacagccttatcaaatgtg 31787501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 7017551 - 7017514
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaact 101  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  7017551 taactgcagccggatttcaaattcctcagcagttaact 7017514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 542815 - 542863
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||| || ||||||||||| ||| ||||||||| |||||||||||    
T  542815 ctcggcagttagctgcagccggatttctaattcctcgacagttaactgc 542863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 3600350 - 3600270
Alignment:
Q  89 tcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||||||| ||||||| |||| | ||||||| | ||||||| ||   |||| |||||||  |||||||||||||    
T  3600350 tcggcagttaactgccgagggggcaaaaacatattttacttgtgtggctcaactttatgaaatgtgtcaacaacaattctc 3600270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 8539532 - 8539596
Alignment:
Q  47 aacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    ||||||||| ||||||| |||||||||||||| ||| ||  | ||||||||||||||| ||||||    
T  8539532 aacattttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggg 8539596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 13707441 - 13707413
Alignment:
Q  85 ttcctcggcagttaactgcagagggggta 113  Q
    |||||||||||||||||||||||||||||    
T  13707441 ttcctcggcagttaactgcagagggggta 13707413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 20200211 - 20200287
Alignment:
Q  93 cagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||| || |||| |||| ||||||||||| ||||| | ||| |||||  ||||||  |||||||||||||    
T  20200211 cagttaactgccgatggggcaaaaacgtattttatttgtgtgcctcagccttatgcaatgtgtcaacaacaattctc 20200287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 29430040 - 29430012
Alignment:
Q  85 ttcctcggcagttaactgcagagggggta 113  Q
    |||||||||||||||||||||||||||||    
T  29430040 ttcctcggcagttaactgcagagggggta 29430012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 113
Target Start/End: Original strand, 29430633 - 29430661
Alignment:
Q  85 ttcctcggcagttaactgcagagggggta 113  Q
    |||||||||||||||||||||||||||||    
T  29430633 ttcctcggcagttaactgcagagggggta 29430661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 39742593 - 39742565
Alignment:
Q  85 ttcctcggcagttaactgcagagggggta 113  Q
    |||||||||||||||||||||||||||||    
T  39742593 ttcctcggcagttaactgcagagggggta 39742565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 31957933 - 31957769
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| |||     
T  31957933 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggtagttaactgcagccggaattcaaattcctcggtagttagctgt 31957834  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattct 168  Q
     |||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  31957833 cgagggggtaaaatcgtattttactagtgtggcacaaccttatcacatgtgggaacaacaattct 31957769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 45454506 - 45454340
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  45454506 aaaatagtatgtagggggagcaggtggttgtttcatctgatgaaacatattcctcggcagttaactgcatccggatttcaaattcctcggcagttaactg 45454407  T
Q  103 cagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    | |||| || |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  45454406 ccgaggaggcaaaatcgtattttactagtgtgccacagtcttatcaaatgtgggaacaacaattctc 45454340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 41744668 - 41744833
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||| |||| ||||||| ||||||||||||||| ||||||  ||     
T  41744668 aaaatagtgtgtagggggagcatgtggctgtttcatctgatgaaacatttcctcagcagttaacggcagccgaaattcaaattcctcgacagttatttgt 41744767  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
     || ||||||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||||    
T  41744768 cgaaggggtaaaatcgtattttactagtgtgacacaactttatcaaatgtgggaacaacaattctc 41744833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 1114796 - 1114677
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||     
T  1114796 atttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttactggtgtggcacagccttatcac 1114697  T
Q  150 atgtgggaacaacaattctc 169  Q
    ||||||||||||||||||||    
T  1114696 atgtgggaacaacaattctc 1114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 20546884 - 20546785
Alignment:
Q  72 gccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||    
T  20546884 gccggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttactagtgtggcacaaccttatcacatgtgggaacaacaattctcaa 20546785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 35966783 - 35966888
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||| ||||  |||||||||| |||||||||||    
T  35966783 taactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaattgtattttactagtgtgacacaaccttatcaaatatgggaacaaca 35966882  T
Q  164 attctc 169  Q
    ||||||    
T  35966883 attctc 35966888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 35962355 - 35962241
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||| ||||||| ||||||||||||| ||||||||||| ||| ||| |||||||||||||| || |||||||||| ||||| ||| |||    
T  35962355 ctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtattttactaatgtggcacagccttattaaacgtg 35962256  T
Q  155 ggaacaacaattctc 169  Q
    |||| | ||||||||    
T  35962255 ggaaaagcaattctc 35962241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 170
Target Start/End: Original strand, 41276881 - 41277000
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||||||||| | ||| ||||||||  ||||||||||| ||||||| ||||  |||  ||| | |||||  |||  |||||||||    
T  41276881 ttttctcggcagttaactgcagccgaatttctaattcctcaacagttaactgccgagggggcaaaaaagtaaattactcgtgtgcaacatccttatcaaa 41276980  T
Q  151 tgtgggaacaacaattctca 170  Q
    ||||||||||||||||||||    
T  41276981 tgtgggaacaacaattctca 41277000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 18205911 - 18205847
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||| |||||    
T  18205911 aaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacataattctcggcagttaact 18205847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 34234601 - 34234517
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||||||||| | |||||||||||| |||  |||| | ||||||||||| |||||||||||||  |||||||||||||    
T  34234601 ttcctcggcagttaactaccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaatgtgtaaacaacaattctc 34234517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 39752971 - 39753070
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||| ||||||||||  |||| | |||||||||||||||||||| || ||||| |  |||||||||||||  ||||||||||||||||||||||||    
T  39752971 aaaatagtatgtagggggaataggtatatgtttcatctgatgaaacatattcctcggtatttaactgcagccgg-tttcaaattcctcggcagttaactg 39753069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 5304197 - 5304284
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||| | ||||    ||| ||||||||||||| |||||||||||||||    
T  5304197 aattccttggcagttaactgccgagggggtaaaaacgtattttactcgtgtttttcagccttatcaaatgtgtgaacaacaattctca 5304284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 39846986 - 39847069
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattct 168  Q
    ||||||||||||||||||  ||||||| |||||| ||||||| | ||||  | ||| |||||||||||||||||||||||||||    
T  39846986 ttcctcggcagttaactggcgagggggcaaaatcttattttactcgtgtttctcagccttatcaaatgtgggaacaacaattct 39847069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 7340194 - 7340128
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||    
T  7340194 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaact 7340128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 44052251 - 44052365
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    ||||| || |||||||||||||| | |||||||||||||| |||||| | ||||||| |||| |||  |||| | ||||| ||||  |||||  ||||||    
T  44052251 ctcggtaggtaactgcagccggattgcaaattcctcggcaattaactaccgagggggcaaaaacgtcatttactcgtgtgccacaaccttatgtaatgtg 44052350  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  44052351 ggaacaacaattctc 44052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 35966697 - 35966746
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  35966697 aaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacattt 35966746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 1114867 - 1114804
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||| |||||    
T  1114867 aaaatagtgtgtagggg-agcaggtggctgtttcatctgatgaaacattccctcggcagttaact 1114804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 1116209 - 1116261
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  1116209 ttttctcggcagttaactgcagccggatttcaaattcctcgacagttaactgc 1116261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 22577790 - 22577726
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||  |||||||||| |||||    
T  22577790 aaatagtgtgtggggggagcaggtggctgtttcatctgatgaaacatacttctcggcagttaact 22577726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 30305515 - 30305627
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattc-aaattcctcggcagttaac 100  Q
    ||||||||||||||||||||||||||   ||||||||| ||||||||||||| ||||| || ||||||| |||||  | | |||  ||||||||||||||    
T  30305515 aaaaatagtgtgtagggggagcaggtagttgtttcatcagatgaaacattttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaac 30305614  T
Q  101 tgcagagggggta 113  Q
    ||| ||| |||||    
T  30305615 tgccgagagggta 30305627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 43188127 - 43188007
Alignment:
Q  50 attttctcggcagctaactgc-agccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatca 148  Q
    |||| |||||||| ||||| | ||||||| ||  ||||||||| || |||||||  ||||||| |||||||||||||| | ||||  | ||| |||||||    
T  43188127 atttcctcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatca 43188028  T
Q  149 aatgtgggaacaacaattctc 169  Q
    |||||| ||||||||||||||    
T  43188027 aatgtgagaacaacaattctc 43188007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 18441494 - 18441580
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||| |||||||||||||||| ||||||| |||| ||||||||| | ||||| | ||| ||||| |||||||  |||||||||||||    
T  18441494 aatttctcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaacaattctc 18441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2146904 - 2146969
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaact 68  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||| ||| ||||||| |||||    
T  2146904 aaaatagtatgtagggggagcaggtggctgtttcatctaatgaaacatattcatcggcagttaact 2146969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 4866559 - 4866510
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt 54  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  4866559 aaatattgtgtagggggaacaggtggctgtttcatctgatgaaacatttt 4866510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 20549257 - 20549318
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaa 116  Q
    ||||| || |||||||||||| | ||||||||||||||||||||||||| ||||||| ||||    
T  20549257 ctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaa 20549318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 41743937 - 41743892
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaact 101  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  41743937 tcggcagttaactgcagccggatttcaaattcctcggcagttaact 41743892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 43262469 - 43262359
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||| ||| ||||||| |||||| ||||    || |||||||||||| |||  |||| | ||||||||||| |||||  ||||||    
T  43262469 ctcggcagttaactgcagctggatttcaaatacctcggaagtt----gccgagggggtaaaaacgtcatttactcgtgtggcacagccttatgtaatgtg 43262374  T
Q  155 ggaacaacaattctc 169  Q
     ||||||||||||||    
T  43262373 agaacaacaattctc 43262359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 39601752 - 39601636
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | ||||||||||||||  |||  ||||||| |||  |||| | ||||||||||| |||||  ||||||    
T  39601752 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagaaggtaaaaacgtcatttactcgtgtggcacagccttatgtaatgtg 39601653  T
Q  155 ggaacaacaattctcaa 171  Q
    |||| | ||||||||||    
T  39601652 ggaatagcaattctcaa 39601636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 41858146 - 41858262
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  ||  ||||| ||| ||||||||||| ||||||| |||| ||||||||| | ||||  | ||| | ||| |||||||    
T  41858146 ctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtg 41858245  T
Q  155 ggaacaacaattctcaa 171  Q
      |||||||||||||||    
T  41858246 tcaacaacaattctcaa 41858262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 7168136 - 7168025
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  ||  ||||| ||||||| |||| |  ||||||| |||||||||||||| | ||||| | ||| ||||| |||||||    
T  7168136 ctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtg 7168037  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  7168036 tcaacaacaatt 7168025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 21406287 - 21406216
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||||||||||||||||||||||| ||   | |||||||| ||||||  | |||||||||||||||||    
T  21406287 aattcctcggcagttaactgcagaggggatattttggtattttactagtgtttctcagtcttatcaaatgtg 21406216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 21800779 - 21800708
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||||||||||||||||||||||| ||   | |||||||| ||||||  | |||||||||||||||||    
T  21800779 aattcctcggcagttaactgcagaggggatattttggtattttactagtgtttctcagtcttatcaaatgtg 21800708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 27704075 - 27703992
Alignment:
Q  89 tcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaat 172  Q
    |||| |||||||||| |  ||||||||| |||  |||||| ||||||||||| |||||  |||||||||||| |||||||||||    
T  27704075 tcggtagttaactgccgcaggggtaaaaacgtcatttatttgtgtggcacagccttatgtaatgtgggaacagcaattctcaat 27703992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 26455734 - 26455804
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgt 153  Q
    |||||||| |||||||||||| ||| |||||||| ||||||||| | ||||  | ||||||||||||||||    
T  26455734 aattcctccgcagttaactgccgagagggtaaaaccgtattttactcgtgtttctcagtcttatcaaatgt 26455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 32378867 - 32378917
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  32378867 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 32378917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 32432822 - 32432872
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  32432822 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 32432872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 38134382 - 38134292
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaatg 173  Q
    |||||||||||||||||||||| ||||||||   | |||||||| ||||||  | ||| |||||||||||||    |||||||||||||||    
T  38134382 aattcctcggcagttaactgcaaagggggtattttggtattttactagtgtttctcagccttatcaaatgtgtattcaacaattctcaatg 38134292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 27704589 - 27704669
Alignment:
Q  89 tcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||| |||||||||| |  ||||||||| |||  |||||| ||||||||||| |||||  |||||||||||| ||||||||    
T  27704589 tcggtagttaactgctgcaggggtaaaaacgtcatttattcgtgtggcacagccttatgtaatgtgggaacagcaattctc 27704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 3641690 - 3641579
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaa 158  Q
    |||| |||||||||||| | ||| ||||| || | | |||||||  ||||||| |||| ||||  ||| | ||||| || || |||||||||||||||||    
T  3641690 gcagttaactgcagccgaagttctaattcatcagtaattaactgtcgagggggcaaaaacgtaaattactcgtgtgccatagccttatcaaatgtgggaa 3641591  T
Q  159 caacaattctca 170  Q
    || |||||||||    
T  3641590 catcaattctca 3641579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 7172608 - 7172683
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||||||| ||| |||||||||  || ||||| |||||||||||||||  || |||| |||| |||||||||    
T  7172608 ttttctcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatggggcaaaaacgtatttta 7172683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 35389634 - 35389587
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  35389634 aaaatagtatgtagggggagcagatggttgtttcatctgatgaaacat 35389587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 38135634 - 38135689
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    ||||| || |||||||||||||  |  |||||||||||||||||||||||||||||    
T  38135634 ctcggtagttaactgcagccggtttataaattcctcggcagttaactgcagagggg 38135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 39751121 - 39751051
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||||||||  ||||||||| ||||||||||| |||  |||||| |||| |||||||||    
T  39751121 ctcggcagttaactgcagccggt-ttcaaattcatcggcagttaattgccaagggggcaaaaacgtatttta 39751051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 7168212 - 7168170
Alignment:
Q  6 aatagtgtgtagggggagcaggtgtctgtttcatctgatgaaa 48  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  7168212 aatagtgtgtaaggggagtaggtgactgtttcatctgatgaaa 7168170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 22550964 - 22551005
Alignment:
Q  130 gtgtggcacagtcttatcaaatgtgggaacaacaattctcaa 171  Q
    ||||||||||| |||||||||||||  |||||||||||||||    
T  22550964 gtgtggcacagccttatcaaatgtgtaaacaacaattctcaa 22551005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 39531 - 39495
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcg 91  Q
    |||||||| |||||||||||||| |||||||||||||    
T  39531 ctcggcagttaactgcagccggatttcaaattcctcg 39495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 3395913 - 3395869
Alignment:
Q  82 aaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||||||||||||||||| ||||||| |||| | |||||||    
T  3395913 aaattcctcggcagttaactgctgagggggcaaaaacatatttta 3395869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 18205831 - 18205763
Alignment:
Q  58 ggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    ||||| |||||||||||||  ||  ||||| |||||||||||| || |||| ||||||| |||||||||    
T  18205831 ggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtatttta 18205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 9890042 - 9889926
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  9890042 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactggtgtggcacagccttatcacatgtg 9889943  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||||||||    
T  9889942 ggaacaacaattctcaa 9889926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 4768778 - 4768615
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||| || ||  ||||||||||||||||||||    
T  4768778 aaaatagtatgtagggggagcaggtgactgtttcatatgatgaaacatatttctcggcagttaactgcagccagattttgaattcctcggcagttaactg 4768679  T
Q  103 cagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaatt 166  Q
    | ||||||| |||||  ||||||| | |||||   ||| ||||| |||||||  ||||||||||    
T  4768678 ccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgtcaacaacaatt 4768615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 41023439 - 41023320
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| ||| |||| |||||||||||||| |||||||| ||||||||||||||||  ||| ||||||||||||||||||| |||||||| || |||||||     
T  41023439 atttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgccaaggaggtaaaatcgtattttattggtgtggcagagccttatcac 41023340  T
Q  150 atgtgggaacaacaattctc 169  Q
    ||||||||||||||||||||    
T  41023339 atgtgggaacaacaattctc 41023320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 50274813 - 50274693
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||| |||| ||||  ||| | ||||| ||||| | ||||||    
T  50274813 atttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgtgtgccacagccctatcaa 50274714  T
Q  150 atgtgggaacaacaattctca 170  Q
    |||||||||||||||||||||    
T  50274713 atgtgggaacaacaattctca 50274693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 37394296 - 37394181
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||| ||||| ||||||||||||| ||||||||||| || | || |||||||||||||| ||||||||||||  | |||||||||||    
T  37394296 ctcggcagttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttactagtgtggcacaaccatatcaaatgtg 37394197  T
Q  155 ggaacaacaattctca 170  Q
    ||||||  ||||||||    
T  37394196 ggaacagtaattctca 37394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 16983574 - 16983456
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||| ||||||| ||| ||  | ||||||||||||||| |||||||||||| |||  |||| | ||||||||||| |||||||||    
T  16983574 ttttctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaa 16983475  T
Q  151 tgtgggaacaacaattctc 169  Q
    ||||  |||||||||||||    
T  16983474 tgtgtaaacaacaattctc 16983456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 15999747 - 15999811
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  15999747 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaact 15999811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 16984186 - 16984302
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | ||||||||||||||| |||||||||||| |||  |||| | ||||||||||| |||||||||||||    
T  16984186 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaatgtg 16984285  T
Q  155 ggaacaacaattctcaa 171  Q
      |||| ||||||||||    
T  16984286 taaacagcaattctcaa 16984302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 37395216 - 37395316
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagaggggg-taaaatcgtattttattagtgtggcacagtcttatcaaatgt 153  Q
    |||||||  |||||||||||||| ||||||||||||| ||||||| ||| |||||||  |||||||||||||| ||||||||||||  ||||||||||||    
T  37395216 ctcggcaattaactgcagccggatttcaaattcctcgacagttaagtgctgagggggcaaaaatcgtattttactagtgtggcacaaccttatcaaatgt 37395315  T
Q  154 g 154  Q
    |    
T  37395316 g 37395316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 1087959 - 1087888
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccg 75  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||| ||||    
T  1087959 aaaatagtgtgtagggggagcaggtagctgtttcatctgatgaaacatttcctcggcagttaactgccgccg 1087888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 1041987 - 1041869
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| ||||||||| |||| ||| ||||||||||||||||||||| ||  ||| ||||  |||  ||| | ||||  ||||| |||||||||    
T  1041987 ttttctcggcagttaactgcagtcggatttctaattcctcggcagttaactgccgatcgggcaaaaaagtaaattactcgtgtaccacagccttatcaaa 1041888  T
Q  151 tgtgggaacaacaattctc 169  Q
    |||||||||||||||||||    
T  1041887 tgtgggaacaacaattctc 1041869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 8109439 - 8109325
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||| |||||||  |  ||||||||| ||||||||| |  ||||||||||||||||||||| | ||||  | ||| |||||||||||||    
T  8109439 ctcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtattttactcgtgtttctcagccttatcaaatgtg 8109340  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  8109339 ggaacaacaattctc 8109325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 56138267 - 56138181
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||| |||||||||||||||  || |||| |||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||    
T  56138267 aatttctcggcagttaactgtcgaaggggcaaaatcgtattttactagtgtggcacaaccttatcaaatgtgggaacagcaattctc 56138181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 9890119 - 9890055
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||    
T  9890119 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatatcctcggcagttaact 9890055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 1044535 - 1044658
Alignment:
Q  47 aacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtctta 145  Q
    ||||||||| ||||||| ||||||||||| || ||||||||| ||| ||||||||||| || || | |||||| ||||||| |||||||||| |   |||    
T  1044535 aacattttcctcggcagttaactgcagccagatttcaaattcatcgacagttaactgccgaaggagcaaaatcatattttactagtgtggcataacttta 1044634  T
Q  146 tcaaatgtgggaacaacaattctc 169  Q
    |||||||| |||||| ||||||||    
T  1044635 tcaaatgttggaacatcaattctc 1044658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 3403909 - 3403847
Alignment:
Q  42 gatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3403909 gatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 3403847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 50278823 - 50278937
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||||| ||| ||||||||||  ||||||  |||| ||||  ||| | ||||| ||||  |||||||||||||    
T  50278823 ctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtg 50278922  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  50278923 ggaacaacaattctc 50278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 18581280 - 18581349
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagc 73  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||  |||||||||| ||||||||||    
T  18581280 aaatagtgtgtagggggagcaggtggttgtttcatctgatgaaacataattctcggcagttaactgcagc 18581349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 17139723 - 17139651
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaaca-ttttctcggcagctaactgcagccgg 76  Q
    ||||||||| ||||| |||||| || |||||||||||||||||||| |||||||||||| |||||||||||||    
T  17139723 aaatagtgtttagggagagcagatgactgtttcatctgatgaaacatttttctcggcagttaactgcagccgg 17139651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 49566421 - 49566533
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattc-aaattcctcggcagttaac 100  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||| || ||||||| |||||  | | |||  ||||||||||||||    
T  49566421 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaac 49566520  T
Q  101 tgcagagggggta 113  Q
    ||| ||| |||||    
T  49566521 tgccgagagggta 49566533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4975894 - 4975827
Alignment:
Q  1 ataaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaac 67  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||    
T  4975894 ataaaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacatattcctcggcagttaac 4975827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 19073714 - 19073781
Alignment:
Q  105 gagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaat 172  Q
    |||| ||||||||||||||||| | ||||||||||  ||||||| |||||||||||||||||||||||    
T  19073714 gaggaggtaaaatcgtattttactggtgtggcacaaccttatcacatgtgggaacaacaattctcaat 19073781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 15995770 - 15995712
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  15995770 ctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggggta 15995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 19069235 - 19069177
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  19069235 ctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggggta 19069177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 19073603 - 19073649
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaaca 50  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  19073603 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaaca 19073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 30042568 - 30042506
Alignment:
Q  12 gtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagcc 74  Q
    ||||||| |||||||||| |||||||||||||||||||||||  ||||||| |||||||||||    
T  30042568 gtgtaggaggagcaggtggctgtttcatctgatgaaacatttcttcggcagttaactgcagcc 30042506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 3450027 - 3450084
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggc 60  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  3450027 aaaatagtgtgtagggggagcaggggactgtttcatctgatgaaacatatttctcggc 3450084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 21471029 - 21470964
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||| ||||||||||| |||||    
T  21471029 aaaatagtgtgtatggggagcaggtgactgtttcatccgatgaaacatatttctcggcagttaact 21470964  T

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Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 56140689 - 56140762
Alignment:
Q  87 cctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaaca 160  Q
    |||||| |||||||||| ||||||| ||||||| |||||| ||||||||||||  |||||||||||||| ||||    
T  56140689 cctcggtagttaactgccgagggggcaaaatcgaattttactagtgtggcacaaccttatcaaatgtggaaaca 56140762  T

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Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 9491285 - 9491394
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcaca---gtcttatcaaatg 152  Q
    ||||||| |||||||||||||| |||||||||||| ||||||         |||||||||||||||||||| |||| || ||||     |||||||||||    
T  9491285 tcggcagttaactgcagccggatttcaaattcctctgcagtt---------gggggtaaaatcgtattttactagtatgacacaacctccttatcaaatg 9491375  T
Q  153 tgggaacaacaattctcaa 171  Q
    |||||||||||||||||||    
T  9491376 tgggaacaacaattctcaa 9491394  T

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Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 39588140 - 39588025
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| || | ||| ||||||||||||||||||||| ||||||| |||| |||  |||| | ||||| ||||  |||||  ||| ||    
T  39588140 ctcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgagggggcaaaaacgtcatttactcgtgtgacacatccttatgcaatatg 39588041  T
Q  155 ggaacaacaattctca 170  Q
     |||||||||||||||    
T  39588040 agaacaacaattctca 39588025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 51644447 - 51644518
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccg 75  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||  || ||||||| ||||||||||||    
T  51644447 aaatagtgtgtagggggagcagatggctgtttcatttgatgaaacataattatcggcagttaactgcagccg 51644518  T

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Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 15999824 - 15999882
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggta 113  Q
    |||||||| ||| |||||||||| |||||||| |||||||||||||||| |||||||||    
T  15999824 ctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgagggggta 15999882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 4979864 - 4979929
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| ||| || |||||||| |||||    
T  4979864 aaaatagtatgtagggggagcaggtgactgtttcatctgatgaagcatattcctcggcagttaact 4979929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 56304924 - 56304808
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  ||||||||||| || ||  ||||||||| ||||||||||| || |||  ||||| |||||||| | ||||  | ||  |||||||||||||    
T  56304924 ctcggcaattaactgcagccagatttttaattcctcgacagttaactgccgatgggcaaaaat-gtattttactcgtgtttctcaaccttatcaaatgtg 56304826  T
Q  155 ggaacaacaattctcaat 172  Q
    ||||||||||||||||||    
T  56304825 ggaacaacaattctcaat 56304808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 21472509 - 21472620
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||||||   ||  ||||||||||||||||||||| |||| || |||| ||||||||| | ||||  | ||| ||||| |||||||    
T  21472509 ctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtg 21472608  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  21472609 tcaacaacaatt 21472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 37959745 - 37959856
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||| ||   | |||||||||  ||||||||||| |||||||||||| ||||||||| | ||||| | ||| |||||  ||||||    
T  37959745 ctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactcgtgtgcctcagccttatgtaatgtg 37959844  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  37959845 tcaacaacaatt 37959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 44049224 - 44049177
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||    
T  44049224 aaaatagtatgtagggggagcaggtggttgtttcatctgatgaaacat 44049177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 13173359 - 13173301
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcag 62  Q
    |||||||  ||||||||||||||||| |||||||||| |||||||||| | ||||||||    
T  13173359 aaaatagaatgtagggggagcaggtggctgtttcatcagatgaaacatatcctcggcag 13173301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 37015949 - 37015865
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||||||||||| ||||||| ||||  ||  |||| |  |||||||||  |||||  |||||||||||||||||||||    
T  37015949 ttcctcggcagttaactgccgagggggcaaaaatgtcatttactcatgtggcacatccttatgtaatgtgggaacaacaattctc 37015865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 39590593 - 39590709
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||| | | ||| ||  | ||||||||||||||| ||||||| |||| | |  |||| | ||||||||||| |||||  ||||||    
T  39590593 ctcggcagttaactgcagctgtatttctaaaacttcggcagttaactgccgagggggcaaaaacatcatttactcgtgtggcacagccttatataatgtg 39590692  T
Q  155 ggaacaacaattctcaa 171  Q
    | |||| ||||||||||    
T  39590693 gaaacagcaattctcaa 39590709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 9472878 - 9472807
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||||||||||||||||   | |||||||| ||||||  | ||| |||||||||||||    
T  9472878 aattcctcagcagttaactgcagagggggtattttagtattttactagtgtttctcagccttatcaaatgtg 9472807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 11494669 - 11494622
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||||||||||| ||| |||||||| ||||||||||| |||||||||    
T  11494669 aaaatagtgtgtaagggaagcaggtggctgtttcatctcatgaaacat 11494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 24417370 - 24417414
Alignment:
Q  9 agtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt 54  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  24417370 agtgtgtagggg-agcaagtggctgtttcatctgatgaaacatttt 24417414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 38464716 - 38464760
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||    
T  38464716 aaaatagtgtgtagggggag---gtgactgtttcatctgatgaaacat 38464760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 51683276 - 51683199
Alignment:
Q  87 cctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaa 164  Q
    ||||||||||||||||| ||||||| |||| ||||||||| | ||||  | ||| |||||| |||||  |||||||||    
T  51683276 cctcggcagttaactgctgagggggcaaaaacgtattttactcgtgtttctcagccttatcgaatgtatgaacaacaa 51683199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 27276399 - 27276513
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  27276399 ctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcacatgtg 27276498  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  27276499 ggaacaacaattctc 27276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 20951020 - 20951188
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  20951020 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatgtcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 20951119  T
Q  104 agagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaatg 173  Q
     ||  ||| |     ||| |||| | ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  20951120 cga-agggcatttaggtaatttactggtgtggcacagccttatcacatgtgggaacagcaattctcaatg 20951188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 1101026 - 1101191
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||| |||||||| |||||||| || |||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||| ||||||||||||||    
T  1101026 aaaatagtatgtagggg-agcaggtgactttttcatctgatgaaacattttcctcggcagttaactacagccggatttcaaattcatcggcagttaactg 1101124  T
Q  103 cagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    | ||||| | |||||| ||||||| |||| | |||||  |||||||||| |||||||||||||||||    
T  1101125 ccgagggagcaaaatcatattttactagtatagcacaaccttatcaaatatgggaacaacaattctc 1101191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 3803517 - 3803616
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3803517 aaaatagtgtgtagggggagcaggtggctgtttcatctaatgaaacatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 3803616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 24749739 - 24749620
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| ||||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| |||||||     
T  24749739 atttcctcggcagttaactacagtcggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcac 24749640  T
Q  150 atgtgggaacaacaattctc 169  Q
    ||||||||||| ||||||||    
T  24749639 atgtgggaacagcaattctc 24749620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 38945862 - 38945752
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  38945862 aaaatagtgtgtagggggagcaggtagctgtttcatcagatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 38945763  T
Q  103 cagagggggta 113  Q
    | |||||||||    
T  38945762 ccgagggggta 38945752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 1096643 - 1096528
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| ||||  |||||||||||||    
T  1096643 ctcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtgccacaaccttatcaaatgtg 1096544  T
Q  155 ggaacaacaattctca 170  Q
    | ||||||||| ||||    
T  1096543 gaaacaacaatactca 1096528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 1149520 - 1149406
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||| ||| ||||||||  |||| ||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||  |||||||||||||    
T  1149520 ctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttactagtgtggcacaaccttatcaaatgtg 1149421  T
Q  155 ggaacaacaattctc 169  Q
    |||||||||||||||    
T  1149420 ggaacaacaattctc 1149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 7263142 - 7262970
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgcag---------ccggaattcaaattcctcggca 94  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| | |          ||| | | || | |  ||  |    
T  7263142 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaactcccgaggatttcctcggcagttaactgcagcg--a 7263045  T
Q  95 gttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||| ||||||||||||| |||||||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  7263044 gttaactgccgagggggtaaaatggtattttactggtgtggcacagccttatcacatgtgggaacaacaattctc 7262970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 34639343 - 34639454
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaa 158  Q
    |||| |||||||||||||| ||  |||| ||||||||||| |||| ||||||| ||||  |||  ||| ||||||||||||| |||||||||||||||||    
T  34639343 gcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaattactagtgtggcacagccttatcaaatgtgggaa 34639442  T
Q  159 caacaattctca 170  Q
    || |||||||||    
T  34639443 catcaattctca 34639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 435468 - 435409
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcag 62  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  435468 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatatttctcggcag 435409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 41183171 - 41183236
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  41183171 aaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacattttcctcggcagttaact 41183236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 25964859 - 25964738
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcgg-------cagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatc 147  Q
    |||||||| |||||||||||||| ||  ||||||||||       | ||||||||| ||||||| |||||||||||||| | ||||  | ||| ||||||    
T  25964859 ctcggcagttaactgcagccggatttttaattcctcggtccttgacggttaactgccgagggggcaaaatcgtattttactcgtgtttctcagccttatc 25964760  T
Q  148 aaatgtgggaacaacaattctc 169  Q
    ||||||||||||||||||||||    
T  25964759 aaatgtgggaacaacaattctc 25964738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 3943213 - 3943330
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||||||||||| ||| ||  | ||||||||||||||| || || | |||| |||  |||| | |||||||| || |||||| ||    
T  3943213 ttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga-ggagcaaaaacgtcatttactcgtgtggcatagccttatctaa 3943311  T
Q  151 tgtgggaacaacaattctc 169  Q
    |||||||||||||||||||    
T  3943312 tgtgggaacaacaattctc 3943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 39794088 - 39794030
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcag 62  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  39794088 aaaatagagtgtagggggagcaggtggctgtttcatctgatgaaacatatcctcggcag 39794030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 41008875 - 41008940
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||    
T  41008875 aaaatagtgtgtagggggagcatgtggctgtttcatctaatgaaacatatttctcggcagttaact 41008940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 43950191 - 43950235
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaa 48  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  43950191 aaaatagtgtgtagggggagtaggtgtctgtttcatctgatgaaa 43950235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 3795385 - 3795330
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggg 110  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  3795385 ctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggg 3795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 23786144 - 23786057
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||| || |||  | ||| ||||||||| |||||||||||||| ||||    
T  23786144 aattcctcggcagttaactgccgaggggacaaaatcatattttactaatgtttctcagccttatcaaacgtgggaacaacaatactca 23786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 25184855 - 25184925
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||||| ||||||| |||| |||||||||    
T  25184855 ctcggcagttaactgcagccggt-ttcaaattcctcgacagttaactgctgagggggcaaaaacgtatttta 25184925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 43870146 - 43870261
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||||||||||||| |||| ||| ||  | ||||||||||||||| || |||| |||| |||  |||| | ||||||||||  |||||  ||||||    
T  43870146 ctcggcagctaactgcagtcggatttctaaaacttcggcagttaactgccgatggggcaaaaacgtcatttactcgtgtggcacaaccttatgtaatgtg 43870245  T
Q  155 ggaacaacaattctca 170  Q
    |||||| |||||||||    
T  43870246 ggaacatcaattctca 43870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 45475488 - 45475389
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||| ||||||  ||  |||| |||||||||||||||| ||||||| |||||||||||||| | ||||| | ||| ||||| |||||||    
T  45475488 ctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttacttgtgtgtctcagccttatgaaatgtg 45475389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 7189976 - 7190089
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||  | ||||||||||||||| || |||| |||| |||| |||| | ||||||||||  |||||  ||||||    
T  7189976 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga-ggggcaaaaacgtaatttactcgtgtggcacaaccttatgtaatgtg 7190074  T
Q  155 ggaacaacaattctc 169  Q
    |||||| ||||||||    
T  7190075 ggaacatcaattctc 7190089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 18003218 - 18003284
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||||||| |||||||||||||  |||||||||| ||||||||||||| |||||||| |||||    
T  18003218 aaaaatagtgtgcagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaact 18003284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 45475565 - 45475519
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  45475565 aaatagtatgtagggggagcaggtggctgtttcatctgatgaaacat 45475519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 2917731 - 2917620
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||| ||||||  ||  |||| |||||||||||||||| ||||||| |||| ||||||||| |  |||| | ||| ||||| |||||||    
T  2917731 ctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgtgcctcagccttatgaaatgtg 2917632  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  2917631 tcaacaacaatt 2917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 19187248 - 19187359
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||| | ||| ||  |||| |||||||||||||||| ||||||| |||| ||||||||| | ||||| | ||| ||||| | ||||     
T  19187248 ctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgatatgtc 19187347  T
Q  155 ggaacaacaatt 166  Q
     |||||||||||    
T  19187348 tgaacaacaatt 19187359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 24607526 - 24607573
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  24607526 aaaatagtatgtagggggagcaggtgactgtttcatttgatgaaacat 24607573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 27276325 - 27276379
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggca 61  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||| |||||||    
T  27276325 aaaatagtgtgtagggggagcaggtggctgtttcat---atgaaacatttcctcggca 27276379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 41560132 - 41560065
Alignment:
Q  3 aaaaatagtgtgtaggggg-agcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    ||||||||||||||||||| |||||||  |||||||||| ||||||||||||| |||||||| |||||    
T  41560132 aaaaatagtgtgtaggggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaact 41560065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 42177267 - 42177338
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||||||||||||||||||||||||||   | |||||||| ||||||  | ||| |||||||||||||    
T  42177267 aattcctcggcagttaactgcagagggggtattttggtattttaatagtgtttctcagccttatcaaatgtg 42177338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 43943737 - 43943658
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtg 134  Q
    |||| ||| |||||||||||||   | ||||||||||  |||||||||| ||||||| |||||||||||||||| |||||    
T  43943737 ctcgacagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaatcgtattttatttgtgtg 43943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 213398 - 213464
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    ||||||| ||||||||||||||||||  ||||||||||  |||||||||||| |||||||| |||||    
T  213398 aaaaataatgtgtagggggagcaggtagctgtttcatcgtatgaaacattttcctcggcagttaact 213464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 10624411 - 10624461
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  10624411 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 10624461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 35493366 - 35493480
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||| ||  ||  ||||||||||||||||||| | ||||||| |||| ||||||||| | ||||| | ||  |||||  ||||||    
T  35493366 ctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtg 35493465  T
Q  155 ggaacaacaattctc 169  Q
      |||||||||||||    
T  35493466 tcaacaacaattctc 35493480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 41181457 - 41181371
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||| | ||||| | ||| |||||  ||||||  |||| ||||||||    
T  41181457 aattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgcaatgtgtcaacatcaattctc 41181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 45137459 - 45137569
Alignment:
Q  56 tcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgg 155  Q
    ||||||| |||||||||||| | ||  |||||||||||| ||||||||  ||| || |||||||||||||| | ||||    ||| |||||||||||| |    
T  45137459 tcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttactcgtgtttatcagccttatcaaatgtag 45137558  T
Q  156 gaacaacaatt 166  Q
    | |||||||||    
T  45137559 gtacaacaatt 45137569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 12908384 - 12908441
Alignment:
Q  12 gtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||| |||||||| ||||||||||||  |||||||||| |||||    
T  12908384 gtgtagggggagcaggtgcctgtttcaactgatgaaacataattctcggcagttaact 12908441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5334689 - 5334637
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc 55  Q
    ||||||||||||||||||||||||||  |||| |||||  |||||||||||||    
T  5334689 aaaaatagtgtgtagggggagcaggtagctgtatcatcgtatgaaacattttc 5334637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 19187171 - 19187235
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||||||||| |||| || ||| |||||||||| |||||||||| ||||||||||| |||||    
T  19187171 aaatagtgtgtagtgggaacaagtgactgtttcatccgatgaaacatatttctcggcagttaact 19187235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 41500255 - 41500375
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaa 150  Q
    |||||||||||| |||||||||||||| ||  ||||| | |  |||||||||| ||||||| |||| ||||||||| | ||||  | ||| | ||| |||    
T  41500255 ttttctcggcagttaactgcagccggattttgaattctttgatagttaactgccgagggggcaaaagcgtattttactcgtgtttctcagccatatgaaa 41500354  T
Q  151 tgtgggaacaacaattctcaa 171  Q
    ||||  |||| ||||||||||    
T  41500355 tgtgtcaacatcaattctcaa 41500375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 12905601 - 12905526
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    |||||||||||| ||||||||||||   ||  |||| |||||||||||||||| ||||||  |||| |||||||||    
T  12905601 ttttctcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtatttta 12905526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 41008953 - 41009051
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||| |||||||||  | ||||||||||||||||||||||| |||| || |||| ||||  ||| | ||||| | | |||||||||||||||    
T  41008953 ctcggcagttaaatgcagccggt-tacaaattcctcggcagttaactgccgaggaggcaaaaacgtaaattactcgtgtgtctcggtcttatcaaatgtg 41009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 23347353 - 23347466
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    ||||| || |||||||||||||| ||| ||  | ||||||||||||||| || |||  |||| |||  |||| | ||||||||||| |||||||||||||    
T  23347353 ctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcaaaaa-cgtcatttactcgtgtggcacagccttatcaaatgtg 23347451  T
Q  155 ggaacaacaattctc 169  Q
      |||| ||||||||    
T  23347452 taaacagcaattctc 23347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 41004580 - 41004524
Alignment:
Q  51 ttttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagg 108  Q
    |||| ||||||| |||||||||||||  | ||||||||||||||||||||||| ||||    
T  41004580 ttttttcggcagttaactgcagccggt-tacaaattcctcggcagttaactgccgagg 41004524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 43950294 - 43950383
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctcaat 172  Q
    |||||| | |||||||||||| ||||||| ||||  |||||||| | ||||  | ||| |||||||||||||  ||||||| ||||||||    
T  43950294 aattccacagcagttaactgccgagggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgtcaacaacagttctcaat 43950383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 29090584 - 29090544
Alignment:
Q  128 tagtgtggcacagtcttatcaaatgtgggaacaacaattct 168  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  29090584 tagtgtggcacaaccttatcaaatgtaggaacaacaattct 29090544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 34921707 - 34921771
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    ||||||| ||||||||||||| ||| || |||||||| |||||||||  |||||||||| |||||    
T  34921707 aaatagtatgtagggggagcatgtggctatttcatctaatgaaacataattctcggcagttaact 34921771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 17371 - 17491
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||     
T  17371 atttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacaaccttatcac 17470  T
Q  150 atgtgggaacaacaattctca 170  Q
    ||||||||||| |||||||||    
T  17471 atgtgggaacagcaattctca 17491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 17300 - 17363
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  17300 aaaatagtgt-tagagggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaact 17363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 4434 - 4540
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||  ||||||| ||||||||||||||    
T  4434 taactgcagccggagttcaaattcctcggcagttaactgccgagggagtaaaatcgtattttactagtgtggcacaaccttatcacatgtgggaacaaca 4533  T
Q  164 attctca 170  Q
    |||||||    
T  4534 attctca 4540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 4348 - 4412
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||||| |||||||| |||||    
T  4348 aaaatagtttgtagggggagcaggtggttgtttcatctgatgaaacatttcctcggcagttaact 4412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 11881 - 11770
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaactgcagccggaattcaaattcctcggcagttaact 101  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||    
T  11881 aaaaatagtgtgtagggggagcaggtagctgtttcatcggatgaaacattttcctcggcagttaactgcagccggatttcaaattcctcggtagttaact 11782  T
Q  102 gcagagggggta 113  Q
    || ||| |||||    
T  11781 gccgagagggta 11770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 879 - 765
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||| |||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  879 ctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtattttactggtgtggcacagccttatcacatgtg 780  T
Q  155 ggaacaacaattctc 169  Q
    |||||| ||||||||    
T  779 ggaacagcaattctc 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 982 - 918
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  982 aaaatagtgtgtagggggagcaggtggctgtttcatctgatgaaacatttcctcggcagttaact 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 18347141 - 18347031
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttc-tcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||||||||||||||||||||  |||||||||  |||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||    
T  18347141 aaaatagtgtgtagggggagcaggtagctgtttcattggatgaaacattttcctcggcagttaactgcagccggatttcagattcctcggcagttaactg 18347042  T
Q  103 cagagggggta 113  Q
    | |||||||||    
T  18347041 ccgagggggta 18347031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 23985955 - 23986077
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| ||||  ||||| |||||||| ||||  ||  |||| ||||||||||||||||    
T  23985955 aaatggtgtgtagggggagcaggtgactgtttcatctgatgaaacatatttcatggcagttaactgcaaccggtttttgaatttctcggcagttaactgc 23986054  T
Q  104 agagggggtaaaatcgtatttta 126  Q
      |||||| |||| |||||||||    
T  23986055 caagggggcaaaaacgtatttta 23986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 31768801 - 31768684
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  |||||||||||||| ||  ||||||||||||||||||||| ||||||| ||||  |||  ||| | ||||  ||||| |||||||||||||    
T  31768801 ctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgttacacagccttatcaaatgtg 31768702  T
Q  155 ggaacaacaattctcaat 172  Q
    ||||||||||||||||||    
T  31768701 ggaacaacaattctcaat 31768684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 13479828 - 13479663
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatct---gatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaac 100  Q
    ||||||||||||||||||||||||| |||||||||||   ||||||||||  ||||| |||| |||||||||| ||  ||  |||||| || ||||||||    
T  13479828 aaatagtgtgtagggggagcaggtggctgtttcatctgaagatgaaacataattctcagcagttaactgcagctggtttttgaattccccgacagttaac 13479729  T
Q  101 tgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaatt 166  Q
    | | ||||||| |||| ||||||||| | ||||| | ||| ||||| |||||||  ||||||||||    
T  13479728 taccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 13479663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 29065779 - 29065674
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||  |||  ||| | ||||| ||||| |||||  |||||||||||||||    
T  29065779 taactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaacaaca 29065680  T
Q  164 attctc 169  Q
    ||||||    
T  29065679 attctc 29065674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 29074792 - 29074687
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||  |||  ||| | ||||| ||||| |||||  |||||||||||||||    
T  29074792 taactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaacaaca 29074693  T
Q  164 attctc 169  Q
    ||||||    
T  29074692 attctc 29074687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 29079556 - 29079451
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||  |||  ||| | ||||| ||||| |||||  |||||||||||||||    
T  29079556 taactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaacaaca 29079457  T
Q  164 attctc 169  Q
    ||||||    
T  29079456 attctc 29079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 29107365 - 29107260
Alignment:
Q  64 taactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaaca 163  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||  |||  ||| | ||||| ||||| |||||  |||||||||||||||    
T  29107365 taactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaacaaca 29107266  T
Q  164 attctc 169  Q
    ||||||    
T  29107265 attctc 29107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 28362756 - 28362873
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaa---ctgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaat 151  Q
    |||||||| |||||||||||||| |||||||||||||||||||||   |||| || ||||||||| |||  |||| | ||||||||||| |||||  |||    
T  28362756 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgccgacggggtaaaaacgtcatttactcgtgtggcacagccttatgtaat 28362855  T
Q  152 gtgggaacaacaattctc 169  Q
    ||||||| | ||||||||    
T  28362856 gtgggaatagcaattctc 28362873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 29061344 - 29061230
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    ||||| || |||||||||||| | ||| ||||||||||||||||||||| ||||||| ||||  |||  ||| | ||||| ||||| |||||  ||||||    
T  29061344 ctcggaagttaactgcagccgaatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatgtaatgtg 29061245  T
Q  155 ggaacaacaattctc 169  Q
    |||||| ||||||||    
T  29061244 ggaacaccaattctc 29061230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 14012400 - 14012515
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||| ||||||| ||| ||  | ||||||||||||||| || |||  |||| |||  |||| | ||||||||||| ||||| |||||||    
T  14012400 ctcggcagttaactgaagccggatttctaaaacttcggcagttaactgctgaagggcaaaaa-cgtcatttactcgtgtggcacagccttattaaatgtg 14012498  T
Q  155 ggaacaacaattctcaa 171  Q
    |||||||||||||||||    
T  14012499 ggaacaacaattctcaa 14012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 18606170 - 18606111
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcag 62  Q
    |||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||    
T  18606170 aaaatagtgtgtagggggagcaggtgactgtttcatctgataaaatatatttctcggcag 18606111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 13388655 - 13388720
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||||||||||||||||||||   ||||||||| ||||||||||||| |||||||| |||||    
T  13388655 aaaatagtgtgtagggggagcaggtagttgtttcatcggatgaaacattttcctcggcagttaact 13388720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 28250011 - 28249946
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||| |||||    
T  28250011 aaaatagtgtgtagggggagcaggtagctgtttcatcaaatgaaacattttcctcggcagttaact 28249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 31146421 - 31146373
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgc 103  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  31146421 ctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 31146498 - 31146434
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaact 68  Q
    |||||||||||||||||||||| || |||||||||| |||||||||| || |||||||| |||||    
T  31146498 aaatagtgtgtagggggagcagatggctgtttcatcagatgaaacatattcctcggcagttaact 31146434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 7363264 - 7363311
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||    
T  7363264 aaaatagtatgtagggggagcagatgactgtttcatctgatgaaacat 7363311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 18606092 - 18605978
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||  | ||||||||| ||||||||||| | ||||||| |||| ||||||||| | ||||| | ||| || ||  ||||||    
T  18606092 ctcggcagttaactgcagccggtgt-caaattcctaggcagttaactaccgagggggcaaaaacgtattttactcgtgtgcctcagcctcatacaatgtg 18605994  T
Q  155 ggaacaacaattctca 170  Q
      ||||||||||||||    
T  18605993 tcaacaacaattctca 18605978  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 1612693 - 1612743
Alignment:
Q  3 aaaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattt 53  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  1612693 aaaaatagtgtgtagggggagcaggtagctgtttcatcgtatgaaacattt 1612743  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 18610231 - 18610321
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttat 146  Q
    |||||||| ||| |||||||||  |||||||||||||||| |||||| | || |||| |||| ||||||||| | ||||| ||||| |||||    
T  18610231 ctcggcagttaaatgcagccggt-ttcaaattcctcggcatttaactaccgaaggggcaaaaacgtattttactcgtgtgacacagccttat 18610321  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 23958938 - 23958827
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||  |||||||||||||  ||  |||| |||||||||||||||| ||||||  |||| ||||||||| | | ||| | ||| ||||||| |||||    
T  23958938 ctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtattttagttgggtgtctcagccttatcatatgtg 23958839  T
Q  155 ggaacaacaatt 166  Q
      ||||||||||    
T  23958838 tcaacaacaatt 23958827  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 16192894 - 16192828
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgc 70  Q
    ||||||||||||||| || || ||| |||||||| ||||||||||||  |||||||||| |||||||    
T  16192894 aaatagtgtgtagggagaacatgtggctgtttcagctgatgaaacataattctcggcagttaactgc 16192828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 26701943 - 26701898
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat 51  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||    
T  26701943 aaatattgtgtagggg-agcaggtgactgtttcatctgatgaaacat 26701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 11687951 - 11688032
Alignment:
Q  89 tcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctca 170  Q
    |||| |||||||||| |  ||||||||| |||  |||| | ||||||||||| |||||  |||||||||||| |||||||||    
T  11687951 tcggtagttaactgccgcaggggtaaaaacgtcatttactcgtgtggcacagccttatgtaatgtgggaacagcaattctca 11688032  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 24218143 - 24218095
Alignment:
Q  5 aaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt 54  Q
    ||||||||||||| ||| |||||||  |||||||||||||||||||||||    
T  24218143 aaatagtgtgtagaggg-gcaggtggttgtttcatctgatgaaacatttt 24218095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 15803 - 15704
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggcagctaactgcagccggaattcaaattcctcggcagttaactg 102  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||| ||||  ||  ||||||||| ||||||||||    
T  15803 aaaatagtatgtagggggagcaggtgactgtttcatctgatgaaacatattcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactg 15704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 3580 - 3664
Alignment:
Q  85 ttcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||||||||||||||||||  |||||| |||||||||||||| ||||||| |||   |||||| |||||||||||||||||||||    
T  3580 ttcctcggcagttaactgcctagggggaaaaatcgtattttactagtgtgccactaccttatcgaatgtgggaacaacaattctc 3664  T

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Target: scaffold0176; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 870 - 764
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||||| | | || |||| |||| ||||  ||| | ||||| ||||  |||||||||||||    
T  870 ctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtg 771  T
Q  155 ggaacaa 161  Q
    |||||||    
T  770 ggaacaa 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 18084 - 17965
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||  ||| ||||||||||||||||||||  ||||||| |||| ||||  ||| | ||||| ||||   |||||||    
T  18084 atttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgccacaactttatcaa 17985  T
Q  150 atgtgggaacaacaattctc 169  Q
    ||||||||||| ||||||||    
T  17984 atgtgggaacatcaattctc 17965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 54760 - 54879
Alignment:
Q  50 attttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaa 149  Q
    |||| |||||||| |||||||||||||  ||| ||||||||||||||||||||  ||||||| |||| ||||  ||| | ||||| ||||   |||||||    
T  54760 atttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgccacaactttatcaa 54859  T
Q  150 atgtgggaacaacaattctc 169  Q
    ||||||||||| ||||||||    
T  54860 atgtgggaacatcaattctc 54879  T

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Target: scaffold0794 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 5397 - 5332
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  5397 aaaatagtatgtagggggagcaggtggctgtttcatctgatgaaacattttcctcggcagttaact 5332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 459 - 575
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||| ||| |||||||||||||| |   ||||| ||||||||||||||| ||||| | |||||||||||||| | ||||  | |||||||||||||||||    
T  459 ctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtattttactcgtgtttctcagtcttatcaaatgtg 558  T
Q  155 ggaacaacaattctcaa 171  Q
      |||| ||||||||||    
T  559 taaacatcaattctcaa 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 371 - 435
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacattttctcggcagctaact 68  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||| |||||    
T  371 aaaatagtgtgtagggggagcaagtagctgtttcatctgatgaaacatttcctcggcagttaact 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 287 - 354
Alignment:
Q  5 aaatagtgtgtagggg-gagcaggtgtctgtttcatctgatgaaacattttctcggcagctaactgca 71  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| ||| ||||||||    
T  287 aaatagtgtgtaggggggagcaggtggctgtttcatctgatgaaacatttcctcgacagttaactgca 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 232596 - 232482
Alignment:
Q  55 ctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||| ||||||||| |||| ||  ||||||||| ||||||||||| |||||| ||||||||||||||| |||| |  | ||  |||||| ||||||    
T  232596 ctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgtattttactagtctttctcaaccttatccaatgtg 232497  T
Q  155 ggaacaacaattctc 169  Q
    |||| | ||||||||    
T  232496 ggaatagcaattctc 232482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 232897 - 232961
Alignment:
Q  105 gagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtgggaacaacaattctc 169  Q
    |||||||||||||||||||||| ||||||  | |||  |||||||||||||||||||||||||||    
T  232897 gagggggtaaaatcgtattttactagtgtttctcagctttatcaaatgtgggaacaacaattctc 232961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 808 - 865
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacat-tttctcggc 60  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  808 aaaatagtgtgtagggggagcaggggactgtttcatctgatgaaacatatttctcggc 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 22447 - 22390
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaa 116  Q
    |||| |||||||||||| | ||||||||||||||||||||||||| ||||||| ||||    
T  22447 gcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaa 22390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 50173 - 50108
Alignment:
Q  4 aaaatagtgtgtagggggagcaggtgtctgtttcatctgatgaaacatttt-ctcggcagctaact 68  Q
    |||||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||| |||||    
T  50173 aaaatagtgtgtagggggagcaggtagctgtttcatcaaatgaaacattttcctcggcagttaact 50108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 812 - 883
Alignment:
Q  83 aattcctcggcagttaactgcagagggggtaaaatcgtattttattagtgtggcacagtcttatcaaatgtg 154  Q
    |||||||||||||||||||||||||||||||   | |||||||| ||||||  | ||| |||||||||||||    
T  812 aattcctcggcagttaactgcagagggggtattttggtattttaatagtgtttctcagccttatcaaatgtg 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 11711 - 11806
Alignment:
Q  32 tgtttcatctgatgaaacatt-ttctcggcagctaactgcagccggaattcaaattcctcggcagttaactgcagagggggtaaaatcgtatttta 126  Q
    ||||||||||||||||||||  ||||| |||| |||||||||||||  ||  ||||| || |||||||||||| || |||| ||||  ||||||||    
T  11711 tgtttcatctgatgaaacataattctcagcagttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtatttta 11806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 8243 - 8194
Alignment:
Q  59 gcagctaactgcagccggaattcaaattcctcggcagttaactgcagagg 108  Q
    |||| |||||||| ||||| ||||||||||| ||||||||||||| ||||    
T  8243 gcagttaactgcatccggatttcaaattccttggcagttaactgccgagg 8194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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