View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12737_low_17 (Length: 339)
Name: NF12737_low_17
Description: NF12737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12737_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 18 - 326
Target Start/End: Complemental strand, 7831956 - 7831648
Alignment:
| Q |
18 |
atactcctcaacaaatcttccacttcaggatccaaatactctacattacttgagcttgaagcttcctctacagaacgattttggcatttcaacagaataa |
117 |
Q |
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| T |
7831956 |
atactcctcaacaaatcttccacttcaggatccaaatactctacattacttgagcttgaagcttcctctacagaacaattttggcatttcaacagaataa |
7831857 |
T |
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| Q |
118 |
caatatttctcaccctctcccaaaaggtttctttcccattccagcttctccaaacaagtggatctccatcttgtaactcaacgcttccccaatagcgacg |
217 |
Q |
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| T |
7831856 |
caatatttctcaccctctcccaaaaggtttctttcccattccagcttctccaaacaagtggatctccatcttgtaactcaacgcttccccaatagcgacg |
7831757 |
T |
|
| Q |
218 |
tcttggagctgagacttcatcttcgactcctttccagaacaaactctctccagttcctctcggtttctcttgacacatctcttcattctgtacatccttt |
317 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
7831756 |
tcttggagctgagacttcatcttcggctcctttccagaacaaactctctccagttcctctcggtttctcttgacacatctcttcattctatacatccttt |
7831657 |
T |
|
| Q |
318 |
ctctgtgct |
326 |
Q |
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||||||||| |
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| T |
7831656 |
ctctgtgct |
7831648 |
T |
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