View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12737_low_28 (Length: 273)
Name: NF12737_low_28
Description: NF12737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12737_low_28 |
 | |
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| [»] scaffold0034 (1 HSPs) |
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| [»] scaffold0364 (1 HSPs) |
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| [»] scaffold0090 (1 HSPs) |
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| [»] scaffold0371 (1 HSPs) |
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| [»] scaffold0149 (1 HSPs) |
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| [»] scaffold0388 (1 HSPs) |
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| [»] scaffold0117 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0485 (1 HSPs) |
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| [»] scaffold0556 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0500 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0381 (1 HSPs) |
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| [»] scaffold0069 (2 HSPs) |
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| [»] scaffold0011 (1 HSPs) |
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| [»] scaffold0420 (1 HSPs) |
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| [»] scaffold0860 (1 HSPs) |
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| [»] scaffold0322 (1 HSPs) |
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| [»] scaffold0126 (1 HSPs) |
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| [»] scaffold0106 (1 HSPs) |
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| [»] scaffold0335 (1 HSPs) |
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| [»] scaffold0089 (1 HSPs) |
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| [»] scaffold0609 (1 HSPs) |
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| [»] scaffold0585 (1 HSPs) |
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| [»] scaffold0635 (1 HSPs) |
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| [»] scaffold0395 (1 HSPs) |
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| [»] scaffold0057 (1 HSPs) |
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| [»] scaffold0672 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 5e-99; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13849570 - 13849784
Alignment:
| Q |
1 |
acgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
13849570 |
acgtactgttgggttggattctttgggtagaacaaataattatgataaattatgttattttactagagctgttgatttgaatatgattgattgttgaatg |
13849669 |
T |
|
| Q |
101 |
ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
13849670 |
ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcacgagttgaccatgttgaggtgtaaggc |
13849769 |
T |
|
| Q |
201 |
atatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13849770 |
atatttaaatatgca |
13849784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16573633 - 16573419
Alignment:
| Q |
1 |
acgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||| |||||||| |||||||||||| || |
|
|
| T |
16573633 |
acgtactgttcggttggattctttgggtagaacaaataattatgataaattatgttattttactagagttgttgacttgaatataattgattgttgaatg |
16573534 |
T |
|
| Q |
101 |
ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat |
200 |
Q |
| |
|
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
16573533 |
ttgatctatgcgtaattgcatataaatagaatatacaagttgttggattccattgtcaaaagttgttgcgtcacgagttgaccatgttgaggtgtaagac |
16573434 |
T |
|
| Q |
201 |
atatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16573433 |
atatttaaatatgca |
16573419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 16592029 - 16592243
Alignment:
| Q |
1 |
acgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||| |||||||| |||||||||||| || |
|
|
| T |
16592029 |
acgtactgttcggttggattctttgggtagaacaaataattatgataaattatgttattttactagagttgttgacttgaatataattgattgttgaatg |
16592128 |
T |
|
| Q |
101 |
ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat |
200 |
Q |
| |
|
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
16592129 |
ttgatctatgcgtaattgcatataaatagaatatacaagttgttggattccattgtcaaaagttgttgcgtcacgagttgaccatgttgaggtgtaagac |
16592228 |
T |
|
| Q |
201 |
atatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16592229 |
atatttaaatatgca |
16592243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 7507205 - 7507399
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||| ||||| ||| |||||||| |
|
|
| T |
7507205 |
tttgggtagaataaataattatgattaattatgttatttttaccagagctgttgatttgaatatgatggattgttgattgttgattcatgtgtaattgca |
7507304 |
T |
|
| Q |
121 |
tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||| ||| ||||| | ||| || ||||||||||||||| ||||||| | |||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
7507305 |
tttaaataaaatgtacaaagtattgaatgccattgtcaaaagtttttgtgtcacaagttgatcatgttgaggtgtaagtcatatttaaatatgca |
7507399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 7529514 - 7529303
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
||||||||||| |||| |||| ||||| | ||||||||| ||||||||||| |||||||| | ||| || |||||||||||| | ||||||||||||| |
|
|
| T |
7529514 |
gtactgttgggctggaatctt-gggtatattaaataattctgattaattatattattttatcagagttgctgatttgaatataaatgattgttgattgtg |
7529416 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
|||||||| |||||||||| |||||| | |||||||||||||| ||||||||||| || |||||||||| || ||||||||||||||| |||||| || |
|
|
| T |
7529415 |
gatttatgtataattgcatgtaaataaattatacaagttgttgaattccattgtcgaaggttgttgtgttgctagttgaccatgttgatgtgtaaatcat |
7529316 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
7529315 |
atttatatatgca |
7529303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 15725824 - 15725649
Alignment:
| Q |
43 |
tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt |
141 |
Q |
| |
|
|||||||||||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||| || | |||| || ||| ||||||||| | |||| ||||| |
|
|
| T |
15725824 |
tgattaattatgttgtttctaccagagttgttgatttgattatggttgattattgattgttgttctatgtatgattatatttaaataaattataaaagtt |
15725725 |
T |
|
| Q |
142 |
gttggattccattgt--caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||| || |||||| |||||||||||||||| | || |||| ||||||| ||||||| ||||||||||||||| |
|
|
| T |
15725724 |
gttgaatgtcattgtaacaaaagttgttgtgtcacaagatgacaatgttgaagtgtaagtcatatttaaatatgca |
15725649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 73 - 215
Target Start/End: Original strand, 39995572 - 39995714
Alignment:
| Q |
73 |
tgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||||||||||||| ||||| ||||||| |||||||| ||| ||| || |||||| | |||||||||||||| ||| |||||| || ||||||||||| |
|
|
| T |
39995572 |
tgatttgaatatgaatgattattgattgtggatttatgtatatttgtatgtaaataaattatacaagttgttgaattatattgtcgaaggttgttgtgtc |
39995671 |
T |
|
| Q |
173 |
gcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|| ||||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
39995672 |
attggtcgaccatgttgatgtgtaagtcatatttatatatgca |
39995714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 15690303 - 15690186
Alignment:
| Q |
35 |
aataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatat |
134 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||||||||| || | |||||| |||||||||||||| ||||| ||| || ||||||||| | ||| |
|
|
| T |
15690303 |
aatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaattat |
15690206 |
T |
|
| Q |
135 |
acaagttgttggattccatt |
154 |
Q |
| |
|
||||||||||| ||| |||| |
|
|
| T |
15690205 |
acaagttgttgaatttcatt |
15690186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 15697896 - 15697779
Alignment:
| Q |
35 |
aataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatat |
134 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||||||||| || | |||||| |||||||||||||| ||||| ||| || ||||||||| | ||| |
|
|
| T |
15697896 |
aatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaattat |
15697799 |
T |
|
| Q |
135 |
acaagttgttggattccatt |
154 |
Q |
| |
|
||||||||||| ||| |||| |
|
|
| T |
15697798 |
acaagttgttgaatttcatt |
15697779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 15731648 - 15731706
Alignment:
| Q |
157 |
caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15731648 |
caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgca |
15731706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 35366289 - 35366213
Alignment:
| Q |
68 |
gctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttgg |
146 |
Q |
| |
|
|||||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||| || ||||||||||||| |||||| |
|
|
| T |
35366289 |
gctgttgatt-gaatatgattg-ttgatgattgctggtttatgcttaattgcattcaattagaatatacaaggtgttgg |
35366213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 42041711 - 42041592
Alignment:
| Q |
95 |
tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg |
194 |
Q |
| |
|
|||||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||||| || ||||||||||| ||||||||||||||| | | |
|
|
| T |
42041711 |
tgattgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc-atagttgaccatgttgatgag |
42041613 |
T |
|
| Q |
195 |
taagatatatttaaatatgca |
215 |
Q |
| |
|
|||| ||||| | ||||||| |
|
|
| T |
42041612 |
taagtcatattcatatatgca |
42041592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 15731595 - 15731650
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaa |
138 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || |||| ||||||||||||| ||||| |
|
|
| T |
15731595 |
atgattgattgttgattgttgaattatgtatgattgtatttaaatagaatgtacaa |
15731650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 41782876 - 41782938
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg |
145 |
Q |
| |
|
|||| |||| |||||||| ||||||||| |||||| |||||||| | | |||||||||||||| |
|
|
| T |
41782876 |
atgaatgatggttgattgttgatttatgtataatttcatttaaacaaattatacaagttgttg |
41782938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43112417 - 43112203
Alignment:
| Q |
1 |
acgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
43112417 |
acgtactgttgggttggattctttggatagaacaaataattatgataaattatgttattttactagagctgttgatttgaatatgattgattgttgaatg |
43112318 |
T |
|
| Q |
101 |
ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
43112317 |
ctgatttatgcataatttcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcacgagttaaccatgttgaggtgtaagac |
43112218 |
T |
|
| Q |
201 |
atatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
43112217 |
atatttaaatatgca |
43112203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 215
Target Start/End: Complemental strand, 20385567 - 20385383
Alignment:
| Q |
31 |
aataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaataga |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| | |
|
|
| T |
20385567 |
aataaataattatgattaattatgttattttaccagagctgttgatttgaatatgattgattgttgattgttgatttatgtataattgcatt--aataaa |
20385470 |
T |
|
| Q |
131 |
atatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatata-tttaaatatgca |
215 |
Q |
| |
|
|||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
20385469 |
atatacaaagttgttgaattccattgtcgaaagttgttgtgtcacgagttgaccacattgaggtgtaagtcatattttaaatatgca |
20385383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 22434314 - 22434499
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| |||| |||||| || |
|
|
| T |
22434314 |
tttgggtagaataaataattatgattaattatgctatttttactagagctgttgatttgaatatgattgattgttgatt-------tatgtataattaca |
22434406 |
T |
|
| Q |
121 |
tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg |
213 |
Q |
| |
|
|||||||| |||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22434407 |
tttaaataaaatatacaagttgttgaatgccattgtcaaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatg |
22434499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 15003796 - 15003961
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||| |||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||| || || ||| ||| || ||||||||| | || |
|
|
| T |
15003796 |
aaatgattatgattaattatgctattttaccaaagctgttgagttgaatatgattgattgttgtttgttgtttgatgtatatttatatttaaataaatta |
15003895 |
T |
|
| Q |
134 |
tacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
|||||| | ||| || || |||| |||| ||||||||||| | | ||||| ||||||||||||||| |
|
|
| T |
15003896 |
tacaagattttgaataccgttgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaag |
15003961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 15267555 - 15267399
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
||||| |||||||||||| |||||||||||| |||||||||| || | |||||| |||||||||||||| ||||| ||| || ||||||||| | || |
|
|
| T |
15267555 |
aaatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaatta |
15267458 |
T |
|
| Q |
134 |
tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgagg |
192 |
Q |
| |
|
|||||||||||| ||| |||| ||||| |||||||| || ||||||| ||||||||| |
|
|
| T |
15267457 |
tacaagttgttgaatttcattttcaaaggttgttgtatcattagttgactatgttgagg |
15267399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 22521607 - 22521768
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| ||||| |||| || | |||||| |||||||||||||| ||||| |||||| ||||||||| | || |
|
|
| T |
22521607 |
aaatagttatgattaattatgttattt-accggagctattgaattaagtatgatgaattgttgattgctg--ttatgtataattatatttaaataaatta |
22521703 |
T |
|
| Q |
134 |
tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
|||||||||||| ||| |||| | ||| |||||||| || ||||||| ||||||||||||||| |
|
|
| T |
22521704 |
tacaagttgttgaatttcatttttaaaggttgttgtatcattagttgactatgttgaggtgtaag |
22521768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 19989456 - 19989376
Alignment:
| Q |
92 |
tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
||||||||| ||| || || |||||| || ||||||| | ||||||| |||||||||| ||||||| || ||||||||||| |
|
|
| T |
19989456 |
tgttgattgttgaattgtgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttgtgtc |
19989376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 7301132 - 7301206
Alignment:
| Q |
70 |
tgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgtt |
144 |
Q |
| |
|
|||||| |||||||||||| ||||||||| || ||||||||||| |||||| || |||| |||||||| |||| |
|
|
| T |
7301132 |
tgttgaattgaatatgatttgctgttgattgttggtttatgcataaatgcattcaattagattatacaagatgtt |
7301206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 21861322 - 21861399
Alignment:
| Q |
95 |
tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | ||||||| || ||||||||||| |
|
|
| T |
21861322 |
tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcgaaggttgttgtgtc |
21861399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 38185778 - 38185855
Alignment:
| Q |
95 |
tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||||| ||||||||| |||||| || | ||| | | ||||||||| |||||| | |||||||||| ||||||||||| |
|
|
| T |
38185778 |
tgattgttgatttatgtataatttcactcaaacaaattatacaagtggttggaattcattgtcaaaggttgttgtgtc |
38185855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 33662236 - 33662447
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
33662236 |
gtactgatgggttggattctttgggtagaataaataattgtgataaattatgttattttatcagagctgttgattcgaatat-attgattgttgattgct |
33662334 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||| || |
|
|
| T |
33662335 |
gatttatgcatagttgcatttaattagaatatacaagttgttggattccattgtcaaaagtcgtcgtgtcacgagttaaccatgttgaggtgtaagacat |
33662434 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||||||||||| |
|
|
| T |
33662435 |
atttaaatatgca |
33662447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 16371387 - 16371598
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
||||||||||| |||| |||| ||||| | ||||| || ||||||||||| |||||||| | ||| || |||||||||||| | ||||| ||||||| |
|
|
| T |
16371387 |
gtactgttgggctggaatctt-gggtatattaaatgatcttgattaattatattattttatcagagttgctgatttgaatataaatgattattgattgtg |
16371485 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
||||||| ||||| |||| |||||| | |||||||||||||| ||||||||||| || |||||||||| | ||||||||||||||| ||||||| || |
|
|
| T |
16371486 |
aatttatgtataatcgcatgtaaataaattatacaagttgttgaattccattgtcgaaggttgttgtgttactagttgaccatgttgatgtgtaagtcat |
16371585 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
16371586 |
atttatatatgca |
16371598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 15416582 - 15416754
Alignment:
| Q |
43 |
tgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttg |
142 |
Q |
| |
|
||||||||||| |||||||| ||| || |||||||||||||| ||||||||||||| |||| || |||||||||| |||||| | ||||||||||| |
|
|
| T |
15416582 |
tgattaattatattattttattagagttgctgatttgaatatgaatgattgttgattgtggattattgtataattgcatgtaaataaattatacaagttg |
15416681 |
T |
|
| Q |
143 |
ttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|| |||||| |||| || ||||||||||| ||||||||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
15416682 |
ttaaattccaatgtcgaaggttgttgtgtcattagttgaccatgttgatgtgtaagtcatatttatatatgca |
15416754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 13881763 - 13881600
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||| |||||| || ||||||||||||||||| |||||| || || ||| ||| | ||||||||| | || |
|
|
| T |
13881763 |
aaataactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgctgattgttgtttgatgtata--tatatttaaataaatta |
13881666 |
T |
|
| Q |
134 |
tacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
|||||||| ||| || ||||||| |||| ||||||||||| | | ||||| ||||||||||||||| |
|
|
| T |
13881665 |
tacaagtttttgaataccattgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaag |
13881600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 13878137 - 13877972
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||| ||||| || |||||||||||| |||| |||||| || || ||| ||| || ||||||||| | || |
|
|
| T |
13878137 |
aaataactatgaataattatgctattttaccatagctgcagagttgaatatgattaattgctgattgttgtttgatgtatatttatatttaaataaatta |
13878038 |
T |
|
| Q |
134 |
tacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
|||||||| ||| | ||||||| |||| ||||||||||| | | |||| ||||||||||||||| |
|
|
| T |
13878037 |
tacaagtttttgaaaaccattgtacaaaggttgttgtgtcacaaactgacaatgttgaggtgtaag |
13877972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 27849267 - 27849333
Alignment:
| Q |
79 |
gaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg |
145 |
Q |
| |
|
|||||||| |||| |||||||| ||||||||| |||||| |||||||| | | |||||||||||||| |
|
|
| T |
27849267 |
gaatatgaatgatggttgattgttgatttatgtataatttcatttaaacaaattatacaagttgttg |
27849333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 21189933 - 21189980
Alignment:
| Q |
168 |
gtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||| ||||||| |||| ||||||||||| ||||||||||||||| |
|
|
| T |
21189933 |
gtgtcgcaagttgactatgtggaggtgtaagacatatttaaatatgca |
21189980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 15318356 - 15318238
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||| |||||||||| || ||||||||| |||||||| | || | |||||| |||||||||||||| || || ||| || ||||||||| | || |
|
|
| T |
15318356 |
aaataactatgattaatcgtgctattttaccagagctgttaaattaagtatgatgaattgttgattgctg--ttgtgtatatttatatttaaataaacta |
15318259 |
T |
|
| Q |
134 |
tacaagttgttggattccatt |
154 |
Q |
| |
|
|||||||||||| ||| |||| |
|
|
| T |
15318258 |
tacaagttgttgaatttcatt |
15318238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 151; Significance: 6e-80; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 23375308 - 23375095
Alignment:
| Q |
1 |
acgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
23375308 |
acgtactgttgggttggattctttggggggaacaaatagttatgatgaattatgttattttacctaagctgttgatttgaatat-attgattgttgattt |
23375210 |
T |
|
| Q |
101 |
ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |
|
|
| T |
23375209 |
ctgatttatgcatagttgcatttaaatagaatatacaagttgttggattccattgtcaaaagtcgttgtgtcatgagttgaccatgttaaggtgtaagac |
23375110 |
T |
|
| Q |
201 |
atatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
23375109 |
atatttaaatatgca |
23375095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 40261649 - 40261458
Alignment:
| Q |
26 |
ggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcattta |
124 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
40261649 |
ggtagagtaaataattatgattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgattgttgatttatgtgtaattgcattta |
40261550 |
T |
|
| Q |
125 |
aatagaatatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
| || ||||||| ||||||||| || |||||| |||||||||||||||| | |||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
40261549 |
attaaaatatacaaagttgttgaatgccattgccaaaagttgttgtgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgca |
40261458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 24160654 - 24160443
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
||||||||||| |||| |||| ||||| | |||||||| ||||||||||| |||||||| | ||| || |||||||||||||| ||||||||||||| |
|
|
| T |
24160654 |
gtactgttgggctggaatctt-gggtatattaaataatcctgattaattatattattttatcagagttgctgatttgaatatgaatgattgttgattgtg |
24160556 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
|||||||| |||||||||| |||||| | |||||||||||||| ||||||||||| || |||||| |||| ||||||||||||||| ||||||| || |
|
|
| T |
24160555 |
gatttatgtataattgcatgtaaataaattatacaagttgttgaattccattgtcgaaggttgttatgtcattagttgaccatgttgatgtgtaagtcat |
24160456 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
24160455 |
atttatatatgca |
24160443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 23085772 - 23085577
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc |
119 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||| | || |||| |||||| |
|
|
| T |
23085772 |
tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtgtaattgt |
23085673 |
T |
|
| Q |
120 |
atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
23085672 |
atttaaataaattatacaagttgttgaatgccattgccaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgca |
23085577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 20353137 - 20353253
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca |
120 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||| | |
|
|
| T |
20353137 |
tttgggtagaataaataattatgatta-ttatgttatttttaccagagctgttgatttgaatatgattgattgttgattgttgttttatgtataattgaa |
20353235 |
T |
|
| Q |
121 |
tttaaatagaatatacaa |
138 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
20353236 |
tttaaataaaatatacaa |
20353253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 21903515 - 21903342
Alignment:
| Q |
43 |
tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt |
141 |
Q |
| |
|
|||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||| || |||| |||||| ||||||||| | |||||||||| |
|
|
| T |
21903515 |
tgattaattatgttgtttctactagagctgttgatttgaatatgattgattattgattgttgtcctatgtataattatatttaaataaattatacaagtt |
21903416 |
T |
|
| Q |
142 |
gttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||| || |||||| ||||||||||| |||| | |||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
21903415 |
gttgaatgccattgacaaaagttgttatgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgca |
21903342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 22841321 - 22841166
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
||||| |||||||||||| |||||||||||| |||||||||| || | |||||| |||| ||||||||| ||||| ||| || ||||||||| | || |
|
|
| T |
22841321 |
aaatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgctgattgctg--ttatgtatatttatatttaaataaatta |
22841224 |
T |
|
| Q |
134 |
tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgag |
191 |
Q |
| |
|
|||||||||||| ||| |||| ||||| |||||||| || ||||||| |||||||| |
|
|
| T |
22841223 |
tacaagttgttgaatttcattttcaaaggttgttgtatcattagttgactatgttgag |
22841166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 190
Target Start/End: Complemental strand, 25651580 - 25651426
Alignment:
| Q |
35 |
aataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatat |
134 |
Q |
| |
|
||||||||||||||||||| ||||||| | ||| |||||||| | |||||| ||||||||||||| |||||| | || |||| || |||| | | ||| |
|
|
| T |
25651580 |
aataattatgattaattataatattttatcagagttgttgatt-gtatatgaatgattgttgattgttgatttgagtatgattgtatgtaaacaaattat |
25651482 |
T |
|
| Q |
135 |
acaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttga |
190 |
Q |
| |
|
| ||||||||| |||||| ||| || ||||| |||| || ||||||||||||||| |
|
|
| T |
25651481 |
ataagttgttgaattccaatgttgaatgttgtggtgttgctagttgaccatgttga |
25651426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 22109740 - 22109619
Alignment:
| Q |
78 |
tgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcga |
176 |
Q |
| |
|
||||||||||||||||||| ||| || || ||| ||| || ||||||||| | |||||||| | ||| || ||||||| |||| ||||||||||| ||| |
|
|
| T |
22109740 |
tgaatatgattgattgttgtttgttgtttgatgtatatttatatttaaataaattatacaagattttgaataccattgtgcaaaggttgttgtgtcacga |
22109641 |
T |
|
| Q |
177 |
gttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
22109640 |
attgacaatgttgaggtgtaag |
22109619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 20353251 - 20353309
Alignment:
| Q |
157 |
caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
20353251 |
caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaagtatgca |
20353309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 10039933 - 10040050
Alignment:
| Q |
97 |
attgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgta |
196 |
Q |
| |
|
|||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||| | || ||||||||||| ||||||||||||||| | ||| |
|
|
| T |
10039933 |
attgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgccgaaggttgttgtgtc-atagttgaccatgttgatgagta |
10040031 |
T |
|
| Q |
197 |
agatatatttaaatatgca |
215 |
Q |
| |
|
|| ||||| | ||||||| |
|
|
| T |
10040032 |
agtcatattcatatatgca |
10040050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 34569 - 34780
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||| |||| |||||||||| |||| | ||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
34569 |
gtactattggattggattctttgggtagaataaataattgtgataaattatgttaatttatcagagctgttgatttgaatat-attgattgttggttgct |
34667 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| || |
|
|
| T |
34668 |
gatttatgcatagttgcatttaaatagaatatacatgttgttggattccattgtcaaaagtcgtcgtgtcacgagttgaccatgttgaggtgtaagacat |
34767 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||||||||||| |
|
|
| T |
34768 |
atttaaatatgca |
34780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0364 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0364
Description:
Target: scaffold0364; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 7498 - 7284
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgc |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7498 |
gtactgttgggttggattctttaggtagaataaataattaggattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgattgt |
7399 |
T |
|
| Q |
102 |
tgatttatgcataattgcatttaaatagaatatacaa-gttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat |
200 |
Q |
| |
|
||| ||||| |||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7398 |
tgacttatgtataattgcatttaactaaaatatacaaagttgttgaattccattgtcaaaagttgttgtgtcacgagttgaccatgttgaggtgtaagtc |
7299 |
T |
|
| Q |
201 |
atatttaaatatgca |
215 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
7298 |
atatttcaatatgca |
7284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 28204391 - 28204602
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28204391 |
gtactgataggttggattcttcgggtagaataaataattgtgataaattatgttattttatcagagctgttgatttgaatat-attgattgttgattgct |
28204489 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||| || |
|
|
| T |
28204490 |
gatttatgcatagttgcgtttaattagaatatacaagttgttggattccattgtcaaaagtcgtcgtgtcacgagttaaccatgttgaggtgtaagacat |
28204589 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||||||||||| |
|
|
| T |
28204590 |
atttaaatatgca |
28204602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 20901519 - 20901325
Alignment:
| Q |
4 |
tactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctg |
103 |
Q |
| |
|
||||||| ||||||||||| | |||| | |||||||||| |||||||||| ||||||||| |||||| ||| | ||||||| ||||||||||||| || |
|
|
| T |
20901519 |
tactgtttggttggattctc-gtgtaggacaaataattataattaattatgctattttaccagagctgctgagtcaaatatgactgattgttgattgttg |
20901421 |
T |
|
| Q |
104 |
atttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
|| ||| ||| || ||||||||| | |||||||||| ||| || ||||| | |||| ||||||||||| | | |||| ||||||||||||||| |
|
|
| T |
20901420 |
tttgatgtatatttatatttaaataaattatacaagtttttgaataccattatacaaaggttgttgtgtcacaaattgataatgttgaggtgtaag |
20901325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 21117996 - 21118090
Alignment:
| Q |
95 |
tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttga |
190 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| | | |||||||||||||| ||| ||||||| || ||||||||||| ||||||||||||||| |
|
|
| T |
21117996 |
tgattgttgatttatgtataattgcatttaaacaaattatacaagttgttgaatttcattgtccaaggttgttgtgtc-atagttgaccatgttga |
21118090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 24960313 - 24960251
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg |
145 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||| |
|
|
| T |
24960313 |
atgaatgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttg |
24960251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 21980703 - 21980918
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgattgttgattgc |
101 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
21980703 |
gtactcttgggttggattctttgggtagaataaataattatgattaattatgttatttttaccagagctgctgatttgaatatgattgattgttgattgt |
21980802 |
T |
|
| Q |
102 |
tgatttatgcataattgcatttaaat-agaatatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaaga |
199 |
Q |
| |
|
||||||||| |||||||||||||| | | || |||| ||||||||| |||||||| |||||||||||||| || |||||||||||||| ||| |||||| |
|
|
| T |
21980803 |
tgatttatgtataattgcatttaattaaaaaaatacaaagttgttgaattccattttcaaaagttgttgtatcacgagttgaccatgtggagatgtaagt |
21980902 |
T |
|
| Q |
200 |
tatatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21980903 |
catatttaaatatgca |
21980918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 21559137 - 21559325
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca |
120 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||| |||||||| |
|
|
| T |
21559137 |
tttgcgtagaataaataattatgattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgagt-------tatgtgtaattgca |
21559229 |
T |
|
| Q |
121 |
tttaaatagaatatacaa-gttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||| ||||||||| ||||||| || ||||||||||||||||||||||| | ||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
21559230 |
tttaaataaaatatacaaagttgttgaatgccattgtcaaaagttgttgtgtcacaagttgcccatgttgaggtataagtcatatttaaatatgca |
21559325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 215
Target Start/End: Complemental strand, 7785537 - 7785357
Alignment:
| Q |
35 |
aataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatat |
134 |
Q |
| |
|
||||||| ||||||||||| ||||||| | ||| | ||||||| |||||| ||||||||||||| |||||| | |||||||||| |||||| | ||| |
|
|
| T |
7785537 |
aataattctgattaattataatattttatcagagtcgctgatttgcatatgaatgattgttgattgtggatttaagtataattgcatgtaaataaattat |
7785438 |
T |
|
| Q |
135 |
acaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||||||| ||| || ||| | ||||| |||| || ||||||||||||||| | |||| ||||||| ||||||| |
|
|
| T |
7785437 |
acaagttgttgaatttcaatgttggatgttgtggtgttgctagttgaccatgttgatgcataagtcatatttatatatgca |
7785357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 26753929 - 26753854
Alignment:
| Q |
93 |
gttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttg |
168 |
Q |
| |
|
|||||||||||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||| || ||||||| |
|
|
| T |
26753929 |
gttgattgctgatttatgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttg |
26753854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 32097 - 32292
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgc |
101 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| ||| || |||||||||| |||||||||| |||||| |
|
|
| T |
32097 |
gtactgttgggttggattctttgg-tagaataaataattatgattaattgtgttatttttaccagagttgctgatttgaatttgattgattgatgattgt |
32195 |
T |
|
| Q |
102 |
tgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaag-ttgttgtgtcgcgagttgaccatgttgaggtgtaa |
197 |
Q |
| |
|
|||| |||| |||||||||| | |||| | |||||||||||||| |||||||||| ||| | |||||||||| | ||||||| |||| ||||||||| |
|
|
| T |
32196 |
tgatctatgtataattgcatgttaataaattatacaagttgttgaattccattgttaaaggtttgttgtgtcactagttgactatgtggaggtgtaa |
32292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0371 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0371
Description:
Target: scaffold0371; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 5746 - 5551
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc |
119 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||| | || |||| ||||||| |
|
|
| T |
5746 |
tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtataattgt |
5647 |
T |
|
| Q |
120 |
atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
5646 |
atttaaataaattatacaagttgttgaatgccattgacaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgca |
5551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0149 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0149
Description:
Target: scaffold0149; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 27729 - 27924
Alignment:
| Q |
22 |
tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc |
119 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||| | || |||| ||||||| |
|
|
| T |
27729 |
tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtataattgt |
27828 |
T |
|
| Q |
120 |
atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
27829 |
atttaaataaattatacaagttgttgaatgccattgacaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgca |
27924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0388 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0388
Description:
Target: scaffold0388; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 15792 - 15982
Alignment:
| Q |
26 |
ggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcattta |
124 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||| || ||| || ||||||||||||||||||||| |||||| |||| |||| |||||||||| || |
|
|
| T |
15792 |
ggtagaataaatgattatgattaattatgctatttttactagagttgctgatttgaatatgattgattgatgattgttgatctatgtataattgcatgta |
15891 |
T |
|
| Q |
125 |
aatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||| | |||||||||||||| ||| ||||||| || |||||||| || | ||||||||||||| || |||| ||||||| ||||||| |
|
|
| T |
15892 |
aataaattatacaagttgttgaatttcattgtcgaaggttgttgtatcactgtttgaccatgttgaagtataagtcatatttatatatgca |
15982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0117
Description:
Target: scaffold0117; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 34035 - 33863
Alignment:
| Q |
43 |
tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt |
141 |
Q |
| |
|
|||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||| || |||| |||||| ||||||||| | |||||||||| |
|
|
| T |
34035 |
tgattaattatgttatttctactagagttgttgatttgaatatgattgattattgattgttgtcctatgtataattatatttaaataaattatacaagtt |
33936 |
T |
|
| Q |
142 |
gttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg |
213 |
Q |
| |
|
|||| || ||||||| ||||| |||||||||| | ||||||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
33935 |
gttgaataccattgtacaaaatttgttgtgtcacaagttgacaatgttgaagtgtaagtcatatttaaatatg |
33863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 182747 - 182919
Alignment:
| Q |
43 |
tgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttg |
142 |
Q |
| |
|
||||||| ||| |||||||| | ||| || ||||||| |||||| ||||||||||||| |||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
182747 |
tgattaagtatattattttatcagagttgctgatttgcatatgaatgattgttgattgtggatttatgtataattgcatgcaaataaaatatacaagttg |
182846 |
T |
|
| Q |
143 |
ttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||| ||| ||||||| || |||||||| | || |||||| |||||||| ||||||| ||||||| ||||||| |
|
|
| T |
182847 |
ttgaatttcattgtcgaaggttgttgtcttgctagttgatcatgttgatgtgtaagtcatatttatatatgca |
182919 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 212
Target Start/End: Complemental strand, 3123 - 2947
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
||||| |||||||||||| |||||||||||| |||||||||| |||| |||||| |||||||||||||| ||||| ||| || ||||||||| | || |
|
|
| T |
3123 |
aaatagttatgattaattgtgttattttaccggagctgttgagttgagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaatta |
3026 |
T |
|
| Q |
134 |
tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatat |
212 |
Q |
| |
|
|||||||||||| ||| |||| ||||| |||||||| || |||||| |||||||||||||||| ||||||| |||| |
|
|
| T |
3025 |
tacaagttgttgaatttcattttcaaaggttgttgtatcattagttgatcatgttgaggtgtaagtcatatttatatat |
2947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0556 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0556
Description:
Target: scaffold0556; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 10043 - 9848
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
|||||||| ||||||||||| | |||| | ||||||||||||||||||||| ||||||||| || ||| || |||||||||||||||||||||||| | |
|
|
| T |
10043 |
gtactgtttggttggattctc-gtgtaggacaaataattatgattaattatgctattttaccagaactgcagagttgaatatgattgattgttgattgtt |
9945 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
| || ||| ||| || ||||||||| | |||||||||| || || ||||||| |||| ||||||||||| | | ||||| ||||||||||||||| |
|
|
| T |
9944 |
gtttgatgtatatttatatttaaataaattatacaagtttttaaataccattgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaag |
9848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 17526656 - 17526484
Alignment:
| Q |
43 |
tgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttg |
142 |
Q |
| |
|
||||||||||| |||||||| | ||| || |||||||| ||||| |||||| || ||| || ||||| |||| ||||| |||||| | |||||||||| |
|
|
| T |
17526656 |
tgattaattatattattttatcagagttgctgatttgagtatgaatgattgctggttgtggaattatgtataactgcatgtaaataaattatacaagttc |
17526557 |
T |
|
| Q |
143 |
ttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||| ||||||||||| || |||||||| | || ||||||||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
17526556 |
ttgaattccattgtcgaaggttgttgtattgctagttgaccatgttgatgtgtaagtcatatttatatatgca |
17526484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 1590337 - 1590512
Alignment:
| Q |
43 |
tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt |
141 |
Q |
| |
|
|||||||||||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||| || | |||| || ||| ||||||||| | |||| ||||| |
|
|
| T |
1590337 |
tgattaattatgttgtttctaccagagttgttgatttgattatggttgattattgattgttgttctatgtatgattatatttaaataaattataaaagtt |
1590436 |
T |
|
| Q |
142 |
gttggattccattgt--caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||| || |||||| |||||||||||||||| | || |||| ||||||| ||||||| ||||||||||||||| |
|
|
| T |
1590437 |
gttgaatgtcattgtaacaaaagttgttgtgtcacaagatgacaatgttgaagtgtaagtcatatttaaatatgca |
1590512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 23620920 - 23621080
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||| ||||| |||||||| |||| | || |||||| || |||||||||||||||||||||||| || || ||| ||| || ||||||||| | || |
|
|
| T |
23620920 |
aaataactatgaataattatgctattgtcccagagctgcagagttgaatatgattgattgttgattgttgtttgatgtatatttatatttaaataaatta |
23621019 |
T |
|
| Q |
134 |
tacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggt |
193 |
Q |
| |
|
|||||||| ||| || ||||||| |||| |||||||||| | | ||||| |||||||||| |
|
|
| T |
23621020 |
tacaagtttttgaataccattgtacaaagtttgttgtgtcacaaattgacgatgttgaggt |
23621080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 1584513 - 1584455
Alignment:
| Q |
157 |
caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1584513 |
caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgca |
1584455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 1639354 - 1639296
Alignment:
| Q |
157 |
caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1639354 |
caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgca |
1639296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 9185648 - 9185766
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
||||| |||||||||||| || ||||||||| |||||||||| || | |||||| ||||||||||| || ||||| ||| || ||||||||| | || |
|
|
| T |
9185648 |
aaatagttatgattaattgtgctattttaccggagctgttgaattaagtatgatgaattgttgattgttg--ttatgtatatttatatttaaataaatta |
9185745 |
T |
|
| Q |
134 |
tacaagttgttggattccatt |
154 |
Q |
| |
|
|||||||||||| ||| |||| |
|
|
| T |
9185746 |
tacaagttgttgaatttcatt |
9185766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 22346981 - 22346892
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||||| | |||| || || ||||||||||| |
|
|
| T |
22346981 |
atgactgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttggaattcattatcgaaggttgttgtgtc |
22346892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 17026988 - 17027068
Alignment:
| Q |
92 |
tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
||||||||| ||||||||| |||||| || ||||||| | |||||||||||||| | | ||||||| || ||||||||||| |
|
|
| T |
17026988 |
tgttgattgttgatttatgtataattacacttaaataaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc |
17027068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 1584566 - 1584511
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaa |
138 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || |||| ||||||||||||| ||||| |
|
|
| T |
1584566 |
atgattgattgttgattgttgaattatgtatgattgtatttaaatagaatgtacaa |
1584511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 1639407 - 1639352
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaa |
138 |
Q |
| |
|
|||||||||||||||||| ||||||||| || |||| ||||||||| ||| ||||| |
|
|
| T |
1639407 |
atgattgattgttgattgttgatttatgtatgattgtatttaaataaaatgtacaa |
1639352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 14724747 - 14724683
Alignment:
| Q |
85 |
gattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggatt |
149 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||||| || ||||||| | ||| ||| |||||||||| |
|
|
| T |
14724747 |
gattgattgttggttgttgatttatgtataattacacttaaataaattatgcaaattgttggatt |
14724683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 189138 - 188927
Alignment:
| Q |
3 |
gtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgct |
102 |
Q |
| |
|
||||||||||| |||| |||| ||||| | |||||||| ||||||||||| |||||||| | ||| || |||||||| |||| ||||| || ||| |
|
|
| T |
189138 |
gtactgttgggctggaatctt-gggtatattaaataatcctgattaattatattattttatcagagttgctgatttgagcatgaatgattactggttgtg |
189040 |
T |
|
| Q |
103 |
gatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatat |
202 |
Q |
| |
|
|||||||| |||||||||| ||| || | ||||||||||||| ||| ||| ||| || |||||||| | || |||||| |||||||| ||||||| || |
|
|
| T |
189039 |
gatttatgtataattgcatgtaattaaattatacaagttgttaaatttcatagtcgaaggttgttgtattgctagttgatcatgttgatgtgtaagtcat |
188940 |
T |
|
| Q |
203 |
atttaaatatgca |
215 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
188939 |
atttatatatgca |
188927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 11404 - 11569
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||| |||||| || |||||||||||||||||||||||| | || ||| ||| || ||||||||| | || |
|
|
| T |
11404 |
aaataactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgttgattgttatttgatgtatatttatatttaaataaagta |
11503 |
T |
|
| Q |
134 |
tacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
|||||||| ||| || ||||||| |||| || |||||||| | | | ||| ||||||||||||||| |
|
|
| T |
11504 |
tacaagtttttgaataccattgtacaaaggtcgttgtgtcacaaatagacaatgttgaggtgtaag |
11569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 2539 - 2674
Alignment:
| Q |
36 |
ataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatata |
135 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| || |||||||||||||||||||||||| || |||||| ||| || | ||||||| | |||| |
|
|
| T |
2539 |
ataattatgattaattatgcaattttaccagagctgctgcgttgaatatgattgattgttgattgttgttttatgtatatttataattaaataaattata |
2638 |
T |
|
| Q |
136 |
caagttgttggattccattgt-caaaagttgttgtg |
170 |
Q |
| |
|
|||||| | | || ||||||| |||| ||||||||| |
|
|
| T |
2639 |
caagttttcgaataccattgtacaaaggttgttgtg |
2674 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0381 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 198
Target Start/End: Original strand, 13709 - 13867
Alignment:
| Q |
41 |
tatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagt |
140 |
Q |
| |
|
||||| |||||||| ||||||||| |||||| || |||||||||||||||||||||||| | || ||| ||| || ||||||||| | ||||||||| |
|
|
| T |
13709 |
tatgaataattatgctattttaccagagctgcagagttgaatatgattgattgttgattgttatttgatgtatatttatatttaaataaagtatacaagt |
13808 |
T |
|
| Q |
141 |
tgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag |
198 |
Q |
| |
|
| ||| || ||||||| |||| || |||||||| | | | ||| ||||||||||||||| |
|
|
| T |
13809 |
ttttgaataccattgtacaaaggtcgttgtgtcacaaatagacaatgttgaggtgtaag |
13867 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 13836738 - 13836657
Alignment:
| Q |
134 |
tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||| | |||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
13836738 |
tacaagttgttgaatgtcattgtcaaaagttgttgtgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgca |
13836657 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 30206285 - 30206347
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttg |
96 |
Q |
| |
|
|||| |||||||||||| ||| |||||| || |||||||||| |||||||||| ||||||||| |
|
|
| T |
30206285 |
aaatgattatgattaataatgctattttgccagagctgttgagttgaatatgagtgattgttg |
30206347 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 10253 - 10200
Alignment:
| Q |
162 |
gttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||| | || |||||||||| |
|
|
| T |
10253 |
gttgttgtgtcacaagttgaccatgttgaggtgtaagtcacatctaaatatgca |
10200 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 29636 - 29518
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||||||||| ||||| ||||||| |||| |||||||||| || | |||||| |||||||||||||| ||||| ||| || ||||||||| | || |
|
|
| T |
29636 |
aaataattatgaataattgtgttattctaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaatta |
29539 |
T |
|
| Q |
134 |
tacaagttgttggattccatt |
154 |
Q |
| |
|
|||||||||||| ||| |||| |
|
|
| T |
29538 |
tacaagttgttgaatttcatt |
29518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 34877 - 34759
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| |||||||||| || | |||||| |||||||||| ||| ||||| ||| || ||||||||| | || |
|
|
| T |
34877 |
aaataattatgaataattgtgttattttaccggagctgttgaattaagtatgatgaattgttgatttctg--ttatgtatatttatatttaaataaatta |
34780 |
T |
|
| Q |
134 |
tacaagttgttggattccatt |
154 |
Q |
| |
|
|||||||||||| ||| |||| |
|
|
| T |
34779 |
tacaagttgttgaatttcatt |
34759 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 21483 - 21601
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
||||| |||||||||||| |||||||||||| ||||||||| || | |||||| |||||||||||||| ||||| ||| || ||||||||| | || |
|
|
| T |
21483 |
aaatagttatgattaattgtgttattttaccgaagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaatta |
21580 |
T |
|
| Q |
134 |
tacaagttgttggattccatt |
154 |
Q |
| |
|
|||||||||||| ||| |||| |
|
|
| T |
21581 |
tacaagttgttgaatttcatt |
21601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 4558 - 4636
Alignment:
| Q |
90 |
attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttg |
168 |
Q |
| |
|
||||||||||| ||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||| || ||||||| |
|
|
| T |
4558 |
attgttgattgttgatttatgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttg |
4636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0860 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0860
Description:
Target: scaffold0860; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 618 - 565
Alignment:
| Q |
41 |
tatgattaattatgttattttacccgagctgttgatttgaatatgattgattgt |
94 |
Q |
| |
|
|||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| |
|
|
| T |
618 |
tatgattaattatgctattttaccagagctgctgagttgaatatgattgattgt |
565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0322 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0322
Description:
Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 19655 - 19575
Alignment:
| Q |
92 |
tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
||||||||| ||||||||| |||||| || ||||||| | |||||||||||||| | | ||||||| || ||||||||||| |
|
|
| T |
19655 |
tgttgattgttgatttatgtataattacacttaaataaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc |
19575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 5991 - 5951
Alignment:
| Q |
175 |
gagttgaccatgttgaggtgtaagatatatttaaatatgca |
215 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5991 |
gagttgaccatgttgaggtgtaagacatatttaaatatgca |
5951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 36547 - 36481
Alignment:
| Q |
90 |
attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt |
156 |
Q |
| |
|
||||||||||| ||||||||| |||||| || ||||||| | ||||||| |||||||||| |||||| |
|
|
| T |
36547 |
attgttgattgttgatttatgtataattacacttaaatatattatacaaattgttggatttcattgt |
36481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0335
Description:
Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 8223 - 8312
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||| | | |||||| || ||||||||||| |
|
|
| T |
8223 |
atgactgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttgaaatttattgtcgaaggttgttgtgtc |
8312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0089
Description:
Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 2300 - 2223
Alignment:
| Q |
95 |
tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | |||||||||| ||||||||||| |
|
|
| T |
2300 |
tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcaaaggttgttgtgtc |
2223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 4822 - 4771
Alignment:
| Q |
41 |
tatgattaattatgttattttacccgagctgttgatttgaatatgattgatt |
92 |
Q |
| |
|
|||||||||||||| ||||||||| |||||| ||| ||||||||||||||| |
|
|
| T |
4822 |
tatgattaattatgctattttaccagagctgctgagatgaatatgattgatt |
4771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 8306 - 8414
Alignment:
| Q |
34 |
aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata |
133 |
Q |
| |
|
|||||||||||| ||||| ||||||| || | | |||||||| || | |||||| |||||||||||||| ||||| ||| || ||||||||| | || |
|
|
| T |
8306 |
aaataattatgaataattttgttattctatcggcgctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaataaatta |
8403 |
T |
|
| Q |
134 |
tacaagttgtt |
144 |
Q |
| |
|
||||||||||| |
|
|
| T |
8404 |
tacaagttgtt |
8414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0635 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0635
Description:
Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 7137 - 7020
Alignment:
| Q |
97 |
attgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgta |
196 |
Q |
| |
|
|||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||| | || ||||||||||| ||||||||||||||| | ||| |
|
|
| T |
7137 |
attgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgccgaaggttgttgtgtc-atagttgaccatgttgatgagta |
7039 |
T |
|
| Q |
197 |
agatatatttaaatatgca |
215 |
Q |
| |
|
|| ||||| | ||||||| |
|
|
| T |
7038 |
agtcatattcatatatgca |
7020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:
Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 1999 - 2089
Alignment:
| Q |
83 |
atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg-gattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||| ||| ||||||||| ||||| ||| |||||| || ||||||| | |||||||||||| | ||||| |||||| || ||||||||||| |
|
|
| T |
1999 |
atgaatgaatgttgattgttgattgatgtataattacacttaaataaattatacaagttgtggagattcaattgtcgaaggttgttgtgtc |
2089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 1792 - 1873
Alignment:
| Q |
90 |
attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
||||||||||| ||||||||| ||||| || ||||||| | ||||||| |||||||||| |||| || || ||||||||||| |
|
|
| T |
1792 |
attgttgattgttgatttatgtataata-cacttaaataaattatacaaattgttggatttcattatcgaaggttgttgtgtc |
1873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0672 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0672
Description:
Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 8258 - 8335
Alignment:
| Q |
95 |
tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc |
172 |
Q |
| |
|
|||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | ||||||| || ||||||||||| |
|
|
| T |
8258 |
tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcgaaggttgttgtgtc |
8335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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