View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12737_low_33 (Length: 249)

Name: NF12737_low_33
Description: NF12737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12737_low_33
NF12737_low_33
[»] chr7 (61 HSPs)
chr7 (1-239)||(13849272-13849510)
chr7 (1-239)||(16573693-16573931)
chr7 (1-239)||(16591731-16591969)
chr7 (1-221)||(7529577-7529797)
chr7 (1-221)||(39995221-39995442)
chr7 (51-233)||(12201456-12201639)
chr7 (51-233)||(12208061-12208244)
chr7 (53-216)||(7506913-7507078)
chr7 (71-194)||(14039170-14039293)
chr7 (71-194)||(14349200-14349323)
chr7 (71-129)||(15103949-15104007)
chr7 (51-123)||(15690435-15690508)
chr7 (51-123)||(15698028-15698101)
chr7 (71-123)||(81690-81742)
chr7 (71-123)||(12800902-12800954)
chr7 (71-123)||(16187342-16187394)
chr7 (71-123)||(16475749-16475801)
chr7 (71-123)||(18009801-18009853)
chr7 (71-123)||(23442698-23442750)
chr7 (54-113)||(15339320-15339379)
chr7 (54-113)||(15710618-15710677)
chr7 (71-186)||(16668012-16668127)
chr7 (71-186)||(17642382-17642497)
chr7 (71-122)||(46681807-46681858)
chr7 (61-123)||(14250147-14250209)
chr7 (72-121)||(12554950-12554999)
chr7 (71-123)||(13318195-13318247)
chr7 (71-123)||(14169144-14169196)
chr7 (71-123)||(14173391-14173443)
chr7 (71-123)||(14581171-14581223)
chr7 (71-123)||(15097578-15097630)
chr7 (71-123)||(15437183-15437235)
chr7 (71-123)||(16073583-16073635)
chr7 (71-123)||(46348366-46348418)
chr7 (71-118)||(3328301-3328348)
chr7 (71-118)||(12695099-12695146)
chr7 (51-121)||(21518787-21518858)
chr7 (71-229)||(14265509-14265667)
chr7 (73-123)||(45185948-45185998)
chr7 (54-123)||(6412322-6412391)
chr7 (71-123)||(11857316-11857368)
chr7 (74-118)||(13020182-13020226)
chr7 (71-123)||(15722825-15722877)
chr7 (71-123)||(17182324-17182376)
chr7 (71-123)||(19146071-19146123)
chr7 (71-123)||(19600360-19600412)
chr7 (71-123)||(20745470-20745522)
chr7 (71-123)||(35962346-35962398)
chr7 (71-193)||(19152354-19152476)
chr7 (71-193)||(20751753-20751875)
chr7 (71-116)||(11219736-11219781)
chr7 (71-123)||(14281266-14281318)
chr7 (69-104)||(15085552-15085587)
chr7 (71-121)||(10520316-10520366)
chr7 (174-224)||(21518684-21518734)
chr7 (71-104)||(14945501-14945534)
chr7 (71-104)||(15373094-15373127)
chr7 (71-104)||(37243929-37243962)
chr7 (71-123)||(15142711-15142763)
chr7 (102-150)||(15731320-15731368)
chr7 (71-123)||(15839076-15839128)
[»] scaffold0058 (2 HSPs)
scaffold0058 (61-239)||(67692-67870)
scaffold0058 (54-123)||(17973-18042)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-239)||(204714-204952)
scaffold0004 (62-224)||(384669-384830)
scaffold0004 (71-123)||(327260-327312)
scaffold0004 (71-123)||(321572-321624)
[»] chr8 (34 HSPs)
chr8 (1-238)||(43112477-43112714)
chr8 (2-239)||(15003465-15003702)
chr8 (1-215)||(20386956-20387169)
chr8 (1-233)||(22617085-22617316)
chr8 (1-231)||(22433987-22434216)
chr8 (102-224)||(22920355-22920478)
chr8 (51-212)||(15267686-15267848)
chr8 (71-224)||(20011630-20011783)
chr8 (71-186)||(25624215-25624330)
chr8 (71-123)||(14594366-14594418)
chr8 (71-123)||(21683305-21683357)
chr8 (71-123)||(21687654-21687706)
chr8 (71-123)||(21690047-21690099)
chr8 (71-123)||(23652600-23652652)
chr8 (71-123)||(20006744-20006796)
chr8 (71-123)||(21685697-21685749)
chr8 (71-123)||(36445377-36445429)
chr8 (69-123)||(20783482-20783536)
chr8 (69-123)||(22175678-22175732)
chr8 (71-116)||(20973646-20973691)
chr8 (71-123)||(20839551-20839603)
chr8 (71-123)||(22063195-22063247)
chr8 (71-123)||(22744213-22744265)
chr8 (71-123)||(33089387-33089439)
chr8 (71-123)||(41009086-41009138)
chr8 (72-123)||(22178103-22178154)
chr8 (71-123)||(11392210-11392262)
chr8 (71-123)||(22025192-22025244)
chr8 (71-123)||(22050715-22050767)
chr8 (71-123)||(31412114-31412166)
chr8 (71-123)||(31418296-31418348)
chr8 (60-123)||(19987808-19987871)
chr8 (73-123)||(1264543-1264593)
chr8 (54-123)||(19860012-19860081)
[»] chr4 (41 HSPs)
chr4 (1-239)||(8710998-8711236)
chr4 (1-239)||(33661935-33662174)
chr4 (2-232)||(13878231-13878461)
chr4 (53-232)||(21189334-21189513)
chr4 (19-221)||(16371104-16371306)
chr4 (54-239)||(13881888-13882073)
chr4 (19-221)||(15416262-15416464)
chr4 (51-224)||(15075857-15076031)
chr4 (51-123)||(32490262-32490335)
chr4 (71-123)||(18165901-18165953)
chr4 (71-123)||(30239581-30239633)
chr4 (70-123)||(14555698-14555751)
chr4 (71-123)||(15004728-15004780)
chr4 (71-123)||(15360438-15360490)
chr4 (71-123)||(16228735-16228787)
chr4 (71-123)||(16485153-16485205)
chr4 (71-123)||(17176875-17176927)
chr4 (71-123)||(18261810-18261862)
chr4 (71-123)||(18271775-18271827)
chr4 (71-123)||(41528700-41528752)
chr4 (71-123)||(53904961-53905013)
chr4 (69-123)||(10972550-10972604)
chr4 (62-160)||(15318458-15318556)
chr4 (60-118)||(23122104-23122162)
chr4 (54-123)||(20940759-20940828)
chr4 (71-123)||(11170856-11170908)
chr4 (71-123)||(14821866-14821918)
chr4 (88-224)||(15069295-15069431)
chr4 (71-123)||(15547068-15547120)
chr4 (71-123)||(19127951-19128003)
chr4 (69-123)||(10783899-10783953)
chr4 (54-123)||(1650673-1650742)
chr4 (71-123)||(49051469-49051521)
chr4 (71-106)||(43284530-43284565)
chr4 (71-123)||(2972341-2972393)
chr4 (71-123)||(13454239-13454291)
chr4 (71-123)||(14487104-14487155)
chr4 (71-123)||(15325383-15325434)
chr4 (71-123)||(16999776-16999828)
chr4 (71-123)||(46044478-46044530)
chr4 (71-123)||(47870647-47870699)
[»] chr2 (34 HSPs)
chr2 (1-239)||(23375368-23375605)
chr2 (1-221)||(24160717-24160937)
chr2 (1-194)||(40261750-40261942)
chr2 (1-233)||(25651675-25651906)
chr2 (71-229)||(24669335-24669493)
chr2 (53-233)||(23085902-23086083)
chr2 (51-123)||(22841452-22841525)
chr2 (71-229)||(21121132-21121290)
chr2 (71-123)||(19035991-19036043)
chr2 (71-123)||(23149118-23149170)
chr2 (71-123)||(23560908-23560960)
chr2 (71-123)||(25267712-25267764)
chr2 (74-123)||(23291437-23291486)
chr2 (71-123)||(17634402-17634454)
chr2 (71-123)||(23753299-23753351)
chr2 (71-123)||(25174379-25174431)
chr2 (71-123)||(25365537-25365589)
chr2 (71-118)||(32911100-32911147)
chr2 (164-233)||(22790631-22790701)
chr2 (73-123)||(24943888-24943938)
chr2 (74-123)||(20913949-20913998)
chr2 (74-123)||(24652828-24652877)
chr2 (71-123)||(2106082-2106134)
chr2 (71-123)||(8889583-8889635)
chr2 (71-123)||(20648584-20648636)
chr2 (71-123)||(20724521-20724573)
chr2 (71-123)||(24659269-24659321)
chr2 (71-123)||(25107083-25107135)
chr2 (71-123)||(19703097-19703149)
chr2 (71-123)||(22810385-22810437)
chr2 (71-122)||(14564302-14564353)
chr2 (71-123)||(19649159-19649211)
chr2 (71-123)||(27272625-27272677)
chr2 (54-94)||(28970910-28970950)
[»] chr1 (46 HSPs)
chr1 (1-239)||(28204091-28204329)
chr1 (2-239)||(20901584-20901821)
chr1 (102-221)||(14800939-14801058)
chr1 (102-221)||(14809813-14809932)
chr1 (53-224)||(21527161-21527332)
chr1 (51-224)||(8685740-8685914)
chr1 (71-229)||(21733929-21734087)
chr1 (51-123)||(8683554-8683627)
chr1 (71-226)||(24475850-24476005)
chr1 (71-123)||(15316120-15316172)
chr1 (71-123)||(21410292-21410344)
chr1 (71-223)||(25091798-25091950)
chr1 (54-113)||(3706393-3706452)
chr1 (71-229)||(21745110-21745268)
chr1 (61-123)||(23631456-23631518)
chr1 (74-123)||(41312659-41312708)
chr1 (71-123)||(5381139-5381191)
chr1 (71-123)||(19853530-19853582)
chr1 (71-123)||(19859665-19859717)
chr1 (71-123)||(21732984-21733036)
chr1 (71-123)||(21986517-21986569)
chr1 (71-123)||(22434570-22434622)
chr1 (71-123)||(23712704-23712756)
chr1 (71-123)||(24238023-24238075)
chr1 (60-123)||(20837818-20837881)
chr1 (71-120)||(31926933-31926982)
chr1 (71-123)||(954705-954757)
chr1 (71-123)||(19666345-19666397)
chr1 (71-123)||(20595728-20595780)
chr1 (71-123)||(20849535-20849587)
chr1 (75-123)||(21698609-21698657)
chr1 (71-118)||(16883173-16883220)
chr1 (54-123)||(20941474-20941543)
chr1 (71-123)||(20243051-20243103)
chr1 (71-123)||(21664674-21664726)
chr1 (71-123)||(30491054-30491106)
chr1 (71-123)||(36917589-36917641)
chr1 (54-113)||(20823989-20824048)
chr1 (71-118)||(29554069-29554116)
chr1 (72-123)||(29601881-29601932)
chr1 (71-114)||(43088851-43088894)
chr1 (85-123)||(19336297-19336335)
chr1 (71-121)||(36615395-36615445)
chr1 (71-123)||(21921270-21921322)
chr1 (71-123)||(24108626-24108678)
chr1 (71-123)||(49328504-49328556)
[»] chr3 (50 HSPs)
chr3 (2-239)||(30205975-30206212)
chr3 (15-221)||(11325409-11325615)
chr3 (71-123)||(24284046-24284098)
chr3 (61-220)||(15232701-15232860)
chr3 (61-220)||(15238569-15238728)
chr3 (61-123)||(15954578-15954640)
chr3 (71-123)||(12153363-12153415)
chr3 (71-123)||(12363881-12363933)
chr3 (75-123)||(13036600-13036648)
chr3 (71-123)||(15011535-15011587)
chr3 (71-123)||(16823426-16823478)
chr3 (71-123)||(17496634-17496686)
chr3 (71-123)||(42109693-42109745)
chr3 (62-224)||(12855374-12855536)
chr3 (54-123)||(10597296-10597365)
chr3 (71-123)||(2269877-2269929)
chr3 (71-123)||(11305386-11305438)
chr3 (71-123)||(11644433-11644485)
chr3 (71-123)||(11939528-11939580)
chr3 (71-123)||(12355598-12355650)
chr3 (71-123)||(12362147-12362199)
chr3 (71-123)||(13692436-13692488)
chr3 (71-123)||(18128186-18128238)
chr3 (71-122)||(15934574-15934625)
chr3 (73-123)||(14288656-14288706)
chr3 (69-123)||(17198665-17198719)
chr3 (54-123)||(16829586-16829655)
chr3 (54-123)||(16838109-16838178)
chr3 (71-123)||(11964554-11964606)
chr3 (71-123)||(12479322-12479374)
chr3 (71-123)||(14293218-14293270)
chr3 (71-123)||(14298845-14298897)
chr3 (71-115)||(15518971-15519015)
chr3 (71-123)||(18135956-18136008)
chr3 (71-123)||(18718763-18718815)
chr3 (71-122)||(12274764-12274815)
chr3 (71-117)||(12202791-12202837)
chr3 (71-116)||(12961024-12961069)
chr3 (71-123)||(12255633-12255685)
chr3 (71-123)||(12256078-12256130)
chr3 (71-123)||(14652357-14652409)
chr3 (71-123)||(18961416-18961468)
chr3 (71-123)||(35985195-35985247)
chr3 (71-123)||(49163622-49163674)
chr3 (61-123)||(16349079-16349140)
chr3 (73-123)||(20376883-20376933)
chr3 (54-123)||(16382523-16382591)
chr3 (75-123)||(12419919-12419967)
chr3 (71-123)||(15375100-15375152)
chr3 (71-123)||(46070752-46070804)
[»] chr6 (36 HSPs)
chr6 (2-238)||(23620590-23620826)
chr6 (1-221)||(17526757-17526977)
chr6 (71-224)||(18138068-18138221)
chr6 (71-123)||(19468333-19468385)
chr6 (54-113)||(1593249-1593308)
chr6 (51-121)||(9185447-9185517)
chr6 (74-123)||(19819409-19819458)
chr6 (71-123)||(14615899-14615951)
chr6 (71-123)||(19451784-19451836)
chr6 (71-123)||(22798135-22798187)
chr6 (71-123)||(23105702-23105754)
chr6 (68-123)||(18786579-18786634)
chr6 (54-113)||(21724377-21724436)
chr6 (71-122)||(24721108-24721159)
chr6 (69-122)||(17414503-17414556)
chr6 (71-160)||(21476796-21476885)
chr6 (71-123)||(18315593-18315645)
chr6 (71-123)||(19588198-19588250)
chr6 (71-123)||(22907469-22907521)
chr6 (71-123)||(26418278-26418330)
chr6 (71-118)||(14374942-14374989)
chr6 (71-118)||(23233035-23233082)
chr6 (71-123)||(933903-933955)
chr6 (71-123)||(13940905-13940956)
chr6 (71-123)||(19727121-19727173)
chr6 (71-123)||(21470295-21470347)
chr6 (71-123)||(23234542-23234594)
chr6 (71-123)||(27767832-27767884)
chr6 (74-117)||(2708882-2708925)
chr6 (71-160)||(25773183-25773271)
chr6 (54-123)||(28289814-28289882)
chr6 (86-123)||(28359463-28359500)
chr6 (102-150)||(1584793-1584841)
chr6 (71-123)||(12446827-12446879)
chr6 (71-123)||(13127907-13127959)
chr6 (71-123)||(17207369-17207421)
[»] scaffold0500 (1 HSPs)
scaffold0500 (2-238)||(11075-11310)
[»] scaffold0860 (1 HSPs)
scaffold0860 (2-221)||(719-938)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-230)||(34279-34507)
scaffold0034 (71-123)||(45-97)
scaffold0034 (73-123)||(6204-6254)
[»] scaffold0388 (1 HSPs)
scaffold0388 (2-221)||(15488-15707)
[»] chr5 (34 HSPs)
chr5 (1-233)||(21980394-21980627)
chr5 (50-221)||(21553773-21553944)
chr5 (1-224)||(7785631-7785853)
chr5 (61-125)||(15193613-15193677)
chr5 (71-123)||(18819417-18819469)
chr5 (71-123)||(21901476-21901528)
chr5 (61-123)||(26706881-26706943)
chr5 (61-123)||(26976615-26976677)
chr5 (54-123)||(22232334-22232403)
chr5 (54-123)||(22237487-22237556)
chr5 (71-123)||(427699-427751)
chr5 (54-118)||(757917-757981)
chr5 (71-123)||(21495375-21495427)
chr5 (71-123)||(21889064-21889116)
chr5 (71-123)||(23443797-23443849)
chr5 (71-122)||(23561209-23561260)
chr5 (71-121)||(20843544-20843594)
chr5 (69-143)||(22500166-22500240)
chr5 (71-123)||(17022394-17022446)
chr5 (71-123)||(21830015-21830067)
chr5 (71-123)||(22379954-22380006)
chr5 (72-120)||(25014066-25014114)
chr5 (71-123)||(6404113-6404165)
chr5 (69-123)||(27635489-27635543)
chr5 (71-123)||(10035625-10035678)
chr5 (74-123)||(20938112-20938161)
chr5 (71-114)||(19801540-19801583)
chr5 (62-123)||(20990763-20990824)
chr5 (71-123)||(5337989-5338041)
chr5 (71-103)||(22312462-22312494)
chr5 (71-123)||(23075927-23075979)
chr5 (71-123)||(24058066-24058118)
chr5 (71-123)||(25420292-25420344)
chr5 (71-123)||(39608508-39608560)
[»] scaffold0609 (1 HSPs)
scaffold0609 (2-221)||(4923-5142)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-150)||(10105-10253)
scaffold0556 (71-123)||(4622-4674)
[»] scaffold0371 (2 HSPs)
scaffold0371 (1-233)||(7972-8205)
scaffold0371 (61-194)||(6549-6682)
[»] scaffold0234 (1 HSPs)
scaffold0234 (57-221)||(26346-26510)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-233)||(31801-32035)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-160)||(182487-182646)
[»] scaffold0381 (1 HSPs)
scaffold0381 (2-139)||(13471-13608)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-221)||(189201-189421)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-224)||(2221-2443)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-109)||(159638-159746)
[»] scaffold0696 (1 HSPs)
scaffold0696 (51-224)||(3045-3219)
[»] scaffold0069 (2 HSPs)
scaffold0069 (51-224)||(35008-35182)
scaffold0069 (53-224)||(29758-29930)
[»] scaffold0001 (3 HSPs)
scaffold0001 (71-194)||(449214-449337)
scaffold0001 (73-123)||(96358-96408)
scaffold0001 (71-114)||(179463-179506)
[»] scaffold1765 (1 HSPs)
scaffold1765 (71-224)||(50-203)
[»] scaffold0480 (1 HSPs)
scaffold0480 (71-224)||(989-1142)
[»] scaffold0395 (1 HSPs)
scaffold0395 (51-224)||(6955-7128)
[»] scaffold0011 (8 HSPs)
scaffold0011 (51-123)||(21279-21352)
scaffold0011 (71-123)||(56392-56444)
scaffold0011 (71-123)||(147453-147505)
scaffold0011 (71-123)||(154640-154692)
scaffold0011 (71-123)||(252393-252445)
scaffold0011 (71-123)||(258999-259051)
scaffold0011 (72-123)||(187452-187503)
scaffold0011 (72-123)||(197079-197130)
[»] scaffold0180 (1 HSPs)
scaffold0180 (71-123)||(12935-12987)
[»] scaffold0005 (3 HSPs)
scaffold0005 (54-113)||(259171-259230)
scaffold0005 (54-113)||(265586-265645)
scaffold0005 (71-123)||(17791-17843)
[»] scaffold2016 (1 HSPs)
scaffold2016 (61-123)||(479-541)
[»] scaffold0485 (1 HSPs)
scaffold0485 (61-123)||(3266-3328)
[»] scaffold0298 (2 HSPs)
scaffold0298 (71-125)||(8750-8804)
scaffold0298 (71-125)||(18834-18888)
[»] scaffold0008 (2 HSPs)
scaffold0008 (61-123)||(124544-124606)
scaffold0008 (69-123)||(35285-35339)
[»] scaffold1853 (1 HSPs)
scaffold1853 (71-123)||(468-520)
[»] scaffold0751 (1 HSPs)
scaffold0751 (71-123)||(913-965)
[»] scaffold0661 (1 HSPs)
scaffold0661 (71-123)||(3680-3732)
[»] scaffold0331 (1 HSPs)
scaffold0331 (71-123)||(19005-19057)
[»] scaffold0301 (2 HSPs)
scaffold0301 (71-123)||(3718-3770)
scaffold0301 (71-118)||(13036-13083)
[»] scaffold0244 (2 HSPs)
scaffold0244 (71-123)||(14110-14162)
scaffold0244 (71-123)||(300-352)
[»] scaffold0139 (2 HSPs)
scaffold0139 (71-123)||(26387-26439)
scaffold0139 (71-123)||(2538-2590)
[»] scaffold0108 (1 HSPs)
scaffold0108 (71-123)||(46013-46065)
[»] scaffold0091 (2 HSPs)
scaffold0091 (71-123)||(22362-22414)
scaffold0091 (71-123)||(26559-26611)
[»] scaffold0054 (2 HSPs)
scaffold0054 (71-123)||(61633-61685)
scaffold0054 (71-122)||(60070-60121)
[»] scaffold0039 (1 HSPs)
scaffold0039 (71-123)||(3400-3452)
[»] scaffold0035 (2 HSPs)
scaffold0035 (71-123)||(1041-1093)
scaffold0035 (71-123)||(10952-11003)
[»] scaffold0434 (1 HSPs)
scaffold0434 (71-122)||(968-1019)
[»] scaffold0156 (1 HSPs)
scaffold0156 (71-122)||(26096-26147)
[»] scaffold0021 (1 HSPs)
scaffold0021 (54-113)||(141823-141882)
[»] scaffold0664 (1 HSPs)
scaffold0664 (69-123)||(2637-2691)
[»] scaffold0326 (1 HSPs)
scaffold0326 (71-121)||(5008-5058)
[»] scaffold0266 (2 HSPs)
scaffold0266 (71-229)||(2424-2581)
scaffold0266 (71-123)||(23503-23555)
[»] scaffold0081 (1 HSPs)
scaffold0081 (71-121)||(55562-55612)
[»] scaffold0053 (1 HSPs)
scaffold0053 (71-121)||(72518-72568)
[»] scaffold0003 (3 HSPs)
scaffold0003 (71-193)||(80713-80835)
scaffold0003 (71-123)||(98090-98142)
scaffold0003 (71-123)||(161128-161180)
[»] scaffold0025 (2 HSPs)
scaffold0025 (54-123)||(71580-71649)
scaffold0025 (71-122)||(77228-77279)
[»] scaffold1336 (1 HSPs)
scaffold1336 (71-123)||(371-423)
[»] scaffold0790 (1 HSPs)
scaffold0790 (71-123)||(4978-5030)
[»] scaffold0706 (1 HSPs)
scaffold0706 (71-123)||(2965-3017)
[»] scaffold0585 (1 HSPs)
scaffold0585 (61-224)||(8000-8164)
[»] scaffold0462 (1 HSPs)
scaffold0462 (71-123)||(8846-8898)
[»] scaffold0405 (2 HSPs)
scaffold0405 (71-123)||(2930-2982)
scaffold0405 (71-123)||(11632-11684)
[»] scaffold0253 (1 HSPs)
scaffold0253 (71-123)||(5770-5822)
[»] scaffold0207 (1 HSPs)
scaffold0207 (71-223)||(9176-9328)
[»] scaffold0205 (1 HSPs)
scaffold0205 (71-123)||(27748-27800)
[»] scaffold0201 (1 HSPs)
scaffold0201 (71-123)||(26805-26857)
[»] scaffold0192 (3 HSPs)
scaffold0192 (71-223)||(21351-21503)
scaffold0192 (71-123)||(32018-32070)
scaffold0192 (71-117)||(7099-7145)
[»] scaffold0190 (1 HSPs)
scaffold0190 (71-123)||(19755-19807)
[»] scaffold0173 (1 HSPs)
scaffold0173 (71-123)||(1851-1903)
[»] scaffold0167 (1 HSPs)
scaffold0167 (71-123)||(7427-7479)
[»] scaffold0124 (2 HSPs)
scaffold0124 (71-123)||(9738-9790)
scaffold0124 (71-123)||(45409-45461)
[»] scaffold0121 (1 HSPs)
scaffold0121 (71-123)||(9751-9803)
[»] scaffold0114 (2 HSPs)
scaffold0114 (71-123)||(47477-47529)
scaffold0114 (71-123)||(42438-42490)
[»] scaffold0102 (3 HSPs)
scaffold0102 (71-123)||(30317-30369)
scaffold0102 (71-123)||(38911-38963)
scaffold0102 (71-123)||(44982-45034)
[»] scaffold0096 (1 HSPs)
scaffold0096 (71-123)||(3382-3434)
[»] scaffold0028 (1 HSPs)
scaffold0028 (71-123)||(92215-92267)
[»] scaffold0017 (1 HSPs)
scaffold0017 (71-123)||(2581-2633)
[»] scaffold0007 (1 HSPs)
scaffold0007 (71-123)||(207348-207400)
[»] scaffold0924 (1 HSPs)
scaffold0924 (71-194)||(2749-2872)
[»] scaffold0023 (2 HSPs)
scaffold0023 (71-118)||(152973-153020)
scaffold0023 (71-123)||(20125-20177)
[»] scaffold1290 (1 HSPs)
scaffold1290 (73-123)||(885-935)
[»] scaffold0923 (1 HSPs)
scaffold0923 (71-121)||(334-384)
[»] scaffold0377 (2 HSPs)
scaffold0377 (70-123)||(3699-3752)
scaffold0377 (70-123)||(7738-7791)
[»] scaffold0342 (1 HSPs)
scaffold0342 (54-123)||(16496-16565)
[»] scaffold0126 (1 HSPs)
scaffold0126 (54-123)||(44683-44752)
[»] scaffold0026 (2 HSPs)
scaffold0026 (74-123)||(143174-143223)
scaffold0026 (71-123)||(62831-62883)
[»] scaffold0015 (1 HSPs)
scaffold0015 (71-116)||(171435-171480)
[»] scaffold0555 (1 HSPs)
scaffold0555 (79-123)||(1894-1938)
[»] scaffold0516 (1 HSPs)
scaffold0516 (71-123)||(6658-6710)
[»] scaffold0334 (1 HSPs)
scaffold0334 (71-123)||(8956-9008)
[»] scaffold0261 (1 HSPs)
scaffold0261 (75-123)||(8893-8941)
[»] scaffold0243 (1 HSPs)
scaffold0243 (71-123)||(11950-12002)
[»] scaffold0239 (1 HSPs)
scaffold0239 (71-123)||(14106-14158)
[»] scaffold0178 (1 HSPs)
scaffold0178 (71-123)||(25942-25994)
[»] scaffold0120 (1 HSPs)
scaffold0120 (71-123)||(4678-4730)
[»] scaffold0106 (2 HSPs)
scaffold0106 (71-123)||(46376-46428)
scaffold0106 (71-123)||(50649-50701)
[»] scaffold0097 (1 HSPs)
scaffold0097 (71-123)||(28350-28402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (71-123)||(17053-17105)
[»] scaffold0074 (1 HSPs)
scaffold0074 (71-123)||(20680-20732)
[»] scaffold0072 (1 HSPs)
scaffold0072 (71-123)||(56371-56423)
[»] scaffold0071 (1 HSPs)
scaffold0071 (71-123)||(50579-50631)
[»] scaffold0022 (2 HSPs)
scaffold0022 (71-123)||(38284-38336)
scaffold0022 (71-123)||(136344-136396)
[»] scaffold0010 (2 HSPs)
scaffold0010 (71-118)||(43738-43785)
scaffold0010 (71-118)||(48804-48851)
[»] scaffold0430 (1 HSPs)
scaffold0430 (54-112)||(14192-14250)
[»] scaffold0076 (1 HSPs)
scaffold0076 (54-123)||(51316-51386)
[»] scaffold0669 (1 HSPs)
scaffold0669 (72-185)||(1273-1386)
[»] scaffold0211 (1 HSPs)
scaffold0211 (71-120)||(9842-9891)
[»] scaffold0104 (1 HSPs)
scaffold0104 (71-123)||(41274-41327)
[»] scaffold0065 (1 HSPs)
scaffold0065 (54-123)||(27383-27452)
[»] scaffold1584 (1 HSPs)
scaffold1584 (71-123)||(830-882)
[»] scaffold0574 (1 HSPs)
scaffold0574 (71-123)||(5518-5570)
[»] scaffold0348 (1 HSPs)
scaffold0348 (71-123)||(15122-15174)
[»] scaffold0220 (1 HSPs)
scaffold0220 (71-123)||(10868-10920)
[»] scaffold0049 (2 HSPs)
scaffold0049 (71-123)||(42551-42603)
scaffold0049 (71-123)||(53246-53298)
[»] scaffold0002 (1 HSPs)
scaffold0002 (71-123)||(370885-370937)
[»] scaffold0063 (2 HSPs)
scaffold0063 (71-122)||(24726-24777)
scaffold0063 (71-121)||(14525-14575)
[»] scaffold0402 (1 HSPs)
scaffold0402 (85-123)||(15456-15494)
[»] scaffold0037 (1 HSPs)
scaffold0037 (73-123)||(101300-101350)
[»] scaffold0947 (1 HSPs)
scaffold0947 (82-123)||(3787-3828)
[»] scaffold0323 (1 HSPs)
scaffold0323 (54-123)||(7740-7809)
[»] scaffold0297 (1 HSPs)
scaffold0297 (71-123)||(1386-1438)
[»] scaffold0249 (1 HSPs)
scaffold0249 (71-123)||(6397-6449)
[»] scaffold0158 (1 HSPs)
scaffold0158 (71-123)||(14904-14956)
[»] scaffold0060 (1 HSPs)
scaffold0060 (71-123)||(41703-41755)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 13849510 - 13849272
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||  |    
T  13849510 tggcgagctcaatgaaatgggctactcgctatggcgagtaagtcgttcgccgtggcgagcagaaaattgctgctctcgagagttttgacatttttcttac 13849411  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| ||| | ||||||||||||| |||||  ||||||||| | ||| |  | |||||||||||||| |||||||||||||    
T  13849410 taaatcctcatttttaagctccctaatcctctttttgatctaaaaacttaaccagtcctctccataaacatccaggcactcaaaaccatccaacatacga 13849311  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13849310 cctaaaacaacattttaaaaatcaaggtttctctctctg 13849272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 16573693 - 16573931
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||  ||||||||| ||||||||| |||||||||||||||||||||||||||  |    
T  16573693 tggcgagctcaaggaaatgggctactcgctatggcgagtaagtcattcgtcgtggcgagtagaaaattgttgctctcgggagttttgacatttttcttac 16573792  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| ||| | |||||| |||||| |||||| ||||||||| | ||| |  | |||||||||||||| |||||||||||||    
T  16573793 taaatcctcatttttaagctccctaatcctcttttttatctaaaaacttgaccagtcctctccataaacatccaggcactcaaaaccatccaacatacga 16573892  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16573893 cctaaaacaacattttaaaaatcaaggtttctctctctg 16573931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 16591969 - 16591731
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||  ||||||||| ||||||||| |||||||||||||||||||||||||||  |    
T  16591969 tggcgagctcaaggaaatgggctactcgctatggcgagtaagtcattcgtcgtggcgagtagaaaattgttgctctcgggagttttgacatttttcttac 16591870  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| ||| | |||||| |||||| |||||| ||||||||| | ||| |  | |||||||||||||| |||||||||||||    
T  16591869 taaatcctcatttttaagctccctaatcctcttttttatctaaaaacttgaccagtcctctccataaacatccaggcactcaaaaccatccaacatacga 16591770  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16591769 cctaaaacaacattttaaaaatcaaggtttctctctctg 16591731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 7529577 - 7529797
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||  || ||| |||||||||||||| |||||||| | ||||| |||||||||||||||| || |||||| ||||||||||||||||||||| |    
T  7529577 tggcgagcttcagaaaaagggctactcgctatggcgagtaagttgttcagcgtggcgagcagaaaaatggtgctcttgggagttttgacatttttctcac 7529676  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||| |||||||||||||||| ||| | ||||||||||||| |||||||||||||||| ||| | |  | || ||||||||||| |||||||  |||     
T  7529677 taaatcttcatttttaagctccctaatcctctttttgatctaaaaacttgcccagtcctctctaaaaacatccaagcactcaaaaccatccaactcacgt 7529776  T
Q  201 cctaaaacaacattttaaaaa 221  Q
    | || ||||||||||| ||||    
T  7529777 catataacaacattttgaaaa 7529797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 39995442 - 39995221
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaat-tgctgctctcgggagttttgacatttttctcc 99  Q
    ||||||||||||  |||||||||||||||| | |||||||| | |||| |||| ||||||||||||  |  ||||||||||||||||||||||||||||     
T  39995442 tggcgagctcaataaaatgggctactcgctctggcgagtaagttgttcgccgtcgcgagcagaaaaaatagtgctctcgggagttttgacatttttctca 39995343  T
Q  100 ctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacg 199  Q
    ||||||| |||||||||||||||| |||   |||||| |||||| || |||| |||||||| ||| | |  | |||||| ||||||| |||||||  ||     
T  39995342 ctaaatcttcatttttaagctccctaatcatcttttttatctaaaaatttgctcagtcctctctagaaacatccaggcagtcaaaaccatccaactcaca 39995243  T
Q  200 acctaaaacaacattttaaaaa 221  Q
     |||| ||||||||||||||||    
T  39995242 tcctataacaacattttaaaaa 39995221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 12201639 - 12201456
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||   |||||| |||| | || |     
T  12201639 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccccaatcatctttttaatctgaaaattg 12201540  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtttctc 233  Q
     |||||||||| ||| | |  | |||||||||||||| ||||||| |||  | || ||||||| ||||||| ||| | ||||||    
T  12201539 ccccagtcctctctaaaaacatccaggcactcaaaaccatccaacttacatcttataacaacaatttaaaattcatgatttctc 12201456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 12208244 - 12208061
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||| | || |     
T  12208244 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattg 12208145  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtttctc 233  Q
     |||||||||| ||| | |  | |||||||||||||| ||||||| |||| | || ||||||| ||||||| ||| | ||||||    
T  12208144 ccccagtcctctctaaaaacatccaggcactcaaaaccatccaacttacgtcttataacaacaatttaaaattcatgatttctc 12208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 7507078 - 7506913
Alignment:
Q  53 tggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaa--ttccctttttgatctaacaacttg 150  Q
    |||||||||| |||| | |||||||||||||||||||||||||| | |||||||||||||||||||||||| ||  ||   ||||| ||| || ||||||    
T  7507078 tggcgagcaggaaatagttgctctcgggagttttgacatttttcacactaaatcctcatttttaagctccctaatcttttgttttttatccaaaaacttg 7506979  T
Q  151 cccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacatttt 216  Q
    |||||||||| | ||| || ||||||||| |||| | |||||||  ||| |||| ||| |||||||    
T  7506978 cccagtcctctccatatatattcaggcacccaaacccatccaacccacgtcctataacgacatttt 7506913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 14039170 - 14039293
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||  |||||| |||||| || |  |||||||||| ||| | |      
T  14039170 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagcttcctaattatctttttaatctaaaaattatcccagtcctctctaaaaaca 14039269  T
Q  171 ttcaggcactcaaaacgatccaac 194  Q
    ||| |||||||||||| |||||||    
T  14039270 ttcgggcactcaaaactatccaac 14039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 14349200 - 14349323
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||  |||||| |||||| || |  |||||||||| ||| | |      
T  14349200 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagcttcctaattatctttttaatctaaaaattatcccagtcctctctaaaaaca 14349299  T
Q  171 ttcaggcactcaaaacgatccaac 194  Q
    ||| |||||||||||| |||||||    
T  14349300 ttcgggcactcaaaactatccaac 14349323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 15104007 - 15103949
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattc 129  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  15104007 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcccctattc 15103949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 15690435 - 15690508
Alignment:
Q  51 cgtggcgagcag-aaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||| |||| || |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  15690435 cgtggcgagcaggaaaaatggtgctctcgagagttttgacatttttctcactaaatcttcatttttaagctccc 15690508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 15698028 - 15698101
Alignment:
Q  51 cgtggcgagcag-aaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||| |||| || |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  15698028 cgtggcgagcaggaaaaatggtgctctcgagagttttgacatttttctcactaaatcttcatttttaagctccc 15698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 81742 - 81690
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  81742 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 81690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 12800954 - 12800902
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12800954 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 12800902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 16187394 - 16187342
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  16187394 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 16187342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 16475801 - 16475749
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16475801 tgctctcgggagttttgaaatttttctcactaaatcctcatttttaagctccc 16475749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 18009801 - 18009853
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  18009801 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 18009853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23442698 - 23442750
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  23442698 tgctctcgggagttttgacatttttcccactaaatcctcatttttaagctccc 23442750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 15339320 - 15339379
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  15339320 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcctcattt 15339379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 15710677 - 15710618
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  15710677 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcctcattt 15710618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 16668127 - 16668012
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||   |||||| |||||| || |  |||||||||| ||| | |      
T  16668127 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccctaatcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 16668028  T
Q  171 ttcaggcactcaaaac 186  Q
    ||||| ||||||||||    
T  16668027 ttcagacactcaaaac 16668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 17642497 - 17642382
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||   |||||| |||||| || |  |||||||||| ||| | |      
T  17642497 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccctaatcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 17642398  T
Q  171 ttcaggcactcaaaac 186  Q
    ||||| ||||||||||    
T  17642397 ttcagacactcaaaac 17642382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 46681858 - 46681807
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  46681858 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcc 46681807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 14250209 - 14250147
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  14250209 agaaaaatggtgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccc 14250147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 12554950 - 12554999
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  12554950 gctctcgggagttttgacatttttctcactaaatcttcatttttaagctc 12554999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 13318195 - 13318247
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  13318195 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccc 13318247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14169196 - 14169144
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  14169196 tgctctcgggagttttgacatttttctcactaaatcttcattttgaagctccc 14169144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14173443 - 14173391
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  14173443 tgctctcgggagttttgacatttttctcactaaatcttcattttgaagctccc 14173391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14581223 - 14581171
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  14581223 tgctctagggagttttgacatttttctcactaaatcttcatttttaagctccc 14581171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15097630 - 15097578
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  15097630 tgctctcgggagttttgacatttttctcactaaatcttcatttttaggctccc 15097578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15437235 - 15437183
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  15437235 tgctctcgggagttctgacatttttctcactaaatcttcatttttaagctccc 15437183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 16073635 - 16073583
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  16073635 tgctctcgggagttttgacatttttcttactaaatcttcatttttaagctccc 16073583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 46348418 - 46348366
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  46348418 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 46348366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 3328301 - 3328348
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  3328301 tgctctcgggagttttgacatttttctcactaaatcttcatttttaag 3328348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 12695099 - 12695146
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  12695099 tgctctcgggagttttgacatttttctcactaaatcttcatttttaag 12695146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 21518858 - 21518787
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    ||||||||||| ||||| || ||||||| |||||||||||||||||||| ||||||| ||| ||||||||||    
T  21518858 cgtggcgagcaagaaaaatggtgctctcaggagttttgacatttttctcactaaatcttcaattttaagctc 21518787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 14265667 - 14265509
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||  | |||||||||||||||| | |   |||||| |||| | || |  |||||||||| ||| | |      
T  14265667 tgctctcgggagttttgacatttttctcactaatacttcatttttaagctccctattcatctttttaatctgaaaattgtcccagtcctctctagaaaca 14265568  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtt 229  Q
    | |||||||||||||| | ||||| ||   | || ||||||| ||||||||||||||||    
T  14265567 tccaggcactcaaaactaaccaacttataccttataacaacaatttaaaaatcaaggtt 14265509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 45185948 - 45185998
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  45185948 ctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 45185998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 6412322 - 6412391
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  ||||||||| |||||||||||||||||||| ||||||| ||| || |||||||||    
T  6412322 ggcgaacagaaaaaagctgctctcaggagttttgacatttttctcactaaatcttcaattctaagctccc 6412391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11857368 - 11857316
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| | |||||||||||||||||| ||||||| ||||||||||||||||    
T  11857368 tgctctcagaagttttgacatttttctcactaaatcttcatttttaagctccc 11857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 13020182 - 13020226
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  13020182 tctcgggagttttgacatttttctcactaaatcttcatttttaag 13020226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15722877 - 15722825
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  15722877 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 15722825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 17182376 - 17182324
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  17182376 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 17182324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19146071 - 19146123
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||| | | ||||||||||||||||    
T  19146071 tgctctcgggagttttgacatttttctcactagaacttcatttttaagctccc 19146123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19600360 - 19600412
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  19600360 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 19600412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20745470 - 20745522
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||| | | ||||||||||||||||    
T  20745470 tgctctcgggagttttgacatttttctcactagaacttcatttttaagctccc 20745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 35962398 - 35962346
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  35962398 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 35962346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 19152354 - 19152476
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    ||||||||||| |||||||||||||||| ||| | | |||||||||| ||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  19152354 tgctctcgggatttttgacatttttctcactagaacttcatttttaaactccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 19152453  T
Q  171 ttcaggcactcaaaacgatccaa 193  Q
    |||||||||||||||| ||||||    
T  19152454 ttcaggcactcaaaactatccaa 19152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 20751753 - 20751875
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    ||||||||||| |||||||||||||||| ||| | | |||||||||| ||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  20751753 tgctctcgggatttttgacatttttctcactagaacttcatttttaaactccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 20751852  T
Q  171 ttcaggcactcaaaacgatccaa 193  Q
    |||||||||||||||| ||||||    
T  20751853 ttcaggcactcaaaactatccaa 20751875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 11219781 - 11219736
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcattttta 116  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||    
T  11219781 tgctctcgggagttttgacatttttctcactaaaatctcattttta 11219736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14281318 - 14281266
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||  |||||| ||| || |||||||||    
T  14281318 tgctctcgggagttttgacatttttctcattaaatcatcaattctaagctccc 14281266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 15085587 - 15085552
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaa 104  Q
    |||||||||||||||||||||||||||||| |||||    
T  15085587 gctgctctcgggagttttgacatttttctcactaaa 15085552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 10520316 - 10520366
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    ||||||||| | |||||||||||||| | ||||||| ||||||||||||||    
T  10520316 tgctctcggaatttttgacatttttcacactaaatcttcatttttaagctc 10520366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 21518734 - 21518684
Alignment:
Q  174 aggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    ||||||||||||| ||||||| |||| | || |||||||||||||||||||    
T  21518734 aggcactcaaaaccatccaacttacgccttataacaacattttaaaaatca 21518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 14945534 - 14945501
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaa 104  Q
    |||||||||||||||||||||||||||| |||||    
T  14945534 tgctctcgggagttttgacatttttctcactaaa 14945501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 15373127 - 15373094
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaa 104  Q
    |||||||||||||||||||||||||||| |||||    
T  15373127 tgctctcgggagttttgacatttttctcactaaa 15373094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 37243962 - 37243929
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaa 104  Q
    |||||||||||||||||||||||||||| |||||    
T  37243962 tgctctcgggagttttgacatttttctcactaaa 37243929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 15142711 - 15142763
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||| ||||| | ||| ||||||||||||    
T  15142711 tgctcttggaagttttgacatttttctcactaaaacttcaattttaagctccc 15142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 15731368 - 15731320
Alignment:
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttg 150  Q
    |||||| |||||||||||| || |||||||||||||||| || ||||||    
T  15731368 aaatccccatttttaagcttcctaattccctttttgatccaaaaacttg 15731320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 15839076 - 15839128
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  15839076 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 15839128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 67692 - 67870
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  67692 agaaaatagctgctctcgggagttttgacatttttctcactaaatcctcatttttaagctccctaattccccttttgatctaacaacttgcccagtcctc 67791  T
Q  161 cctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67792 cctatacatgtccaggtactcaaaaccatccaacatacgacctaaaacaacattttaaaaatcaaggtttctctctctg 67870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 17973 - 18042
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  17973 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctctctaaatcttcaattctaagctccc 18042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 151; Significance: 5e-80; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 204952 - 204714
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||| |||||||| ||||||||| |||||||| ||  || |||||||||||| ||||| ||||||||||| |||||||||||||||| | |    
T  204952 tggcgagctcaagaaaatgggcaactcgctatggcgagtaagtcactcgccgtggcgagcaaaaaatagctgctctcggaagttttgacatttttcacac 204853  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||  ||| |||||||||||| || |||||||||||||||| || ||||||| |||||||||||||| |||||||| ||||    
T  204852 taaatcctcatttttaagctccttaatcccctttttgatccaaaaacttgcccagtcctctctgtacatgtccaggcactcaaaaccatccaacacacga 204753  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  204752 cctaaaacaacattttaaaaatcaaggtttctctctctg 204714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 224
Target Start/End: Original strand, 384669 - 384830
Alignment:
Q  62 gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattc-cctttttgatctaacaacttgcccagtcctc 160  Q
    ||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||   |||  |||||| |||||| || |  ||||||||||    
T  384669 gaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc--tttcatctttttaatctaaaaattgtcccagtcctc 384766  T
Q  161 cctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    |||| | |  | |||||||||||||| ||||||| |||  | || ||||||| ||| |||||||    
T  384767 cctaaaaacatccaggcactcaaaactatccaacttacatcttataacaacaatttgaaaatca 384830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 327260 - 327312
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||| ||||    
T  327260 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagttccc 327312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 321572 - 321624
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| | ||| | ||||||||||| ||||    
T  321572 tgctctcggaagttttgacatttttctcacaaaaacttcatttttaagttccc 321624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 43112477 - 43112714
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||  |    
T  43112477 tggcaagctcatggaaatgggctactcgctatggcgagtaagtcgttcaccgtggcgagcagaaaattgctgctctcgaaagttttgacatttttcttac 43112576  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||| |||||| ||||||||| | ||| |  |  ||||||||||||| |||||||||||||    
T  43112577 taaatcctcatttctaagctccctaatcctctttttgatctaaaaacttgaccagtcctctccataaacatctaggcactcaaaaccatccaacatacga 43112676  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctct 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43112677 cctaaaacaacattttaaaaatcaaggtttctctctct 43112714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 15003702 - 15003465
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||| |||| ||| | |||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  15003702 ggcgaactcaagaaaataggctactcgctatggcgattaagttgttcgccgtggcgagcagaaaaatggtgctctcgggagttttgacatttttctcact 15003603  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||| |||||||||||||||| ||| | ||||||||||||| ||||||  |||||||| | ||| |  | |||||||||||||| ||||||||||| ||    
T  15003602 aaatcttcatttttaagctccctaatcctctttttgatctaaaaacttgatcagtcctctccataaacatccaggcactcaaaaccatccaacatactac 15003503  T
Q  202 ctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
     ||||||||||||||||||||||| ||| || ||||||    
T  15003502 ttaaaacaacattttaaaaatcaaagttcctttctctg 15003465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 20386956 - 20387169
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||| ||| ||||||||||||||| || |||||||| ||  || |||||| ||||||||||| |||||||||||||||||||||||||||| | |    
T  20386956 tggcgagctgaagaaaatgggctactcgcgatggcgagtaagtcactcgccgtggagagcagaaaatagctgctctcgggagttttgacatttttcacac 20387055  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| || |||| |||||||| || |||||||||| ||||| |||||||| |  ||||||||||||| |||||||  |||     
T  20387056 taaatcctcatttttaagctccctaa-tccccttttgatccaaaaacttgcccaatcctctctatacatatctaggcactcaaaaccatccaacccacgt 20387154  T
Q  201 cctaaaacaacattt 215  Q
    |||| ||||||||||    
T  20387155 cctataacaacattt 20387169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 22617085 - 22617316
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcag-aaaattgctgctctcgggagttttgacatttttctcc 99  Q
    |||||| |||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||| |||| || ||||||||||||||||||||||||||||     
T  22617085 tggcgaactcaagaaaataggctactcgctatggcgagtaagttgttcgccgtggcgagcaggaaaaatggtgctctcgggagttttgacatttttctca 22617184  T
Q  100 ctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacg 199  Q
    ||||||| |||||||||||||||| || || |||||| |||||| || | ||||||||||| ||| | |  | |||||||||||||| ||||||| ||||    
T  22617185 ctaaatcttcatttttaagctccctaa-tcactttttaatctaaaaattggcccagtcctctcta-aaaaatccaggcactcaaaaccatccaacttacg 22617282  T
Q  200 acctaaaacaacattttaaaaatcaaggtttctc 233  Q
     | || ||||||||||||||||||| | ||||||    
T  22617283 tcttataacaacattttaaaaatcatgatttctc 22617316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22434216 - 22433987
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||||||||||||| ||||||||||  |||||||| ||  ||  ||||||||||||||||| | |||||||||||||||||| ||||||| | |    
T  22434216 tggcgagctcaaggaaatgg-ctactcgctagggcgagtaagtcactcgtcgtggcgagcagaaaatagttgctctcgggagttttgatatttttcacac 22434118  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| |||    ||||||| | || ||||||||| |||||| ||||| || | ||||||| |||||| |||||||  |||     
T  22434117 taaatcctcatttttaagctccctaatcttttttttga-ccaaaaacttgcccggtcctctctatatatatccaggcacccaaaaccatccaacccacgt 22434019  T
Q  201 cctaaaacaacatttt-aaaaatcaaggtttc 231  Q
    |||  ||| ||||||| |||||||||| ||||    
T  22434018 cctgtaacgacattttgaaaaatcaagttttc 22433987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 22920478 - 22920355
Alignment:
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    |||||| ||||||||||||| | ||| |||||||||||| || |||||||| ||||||  ||||||||||  ||||| ||||||| |||||| | |||||    
T  22920478 aaatccccatttttaagctctctaatcccctttttgatccaaaaacttgcctagtcctttctatacatgtcaaggcagtcaaaaccatccaaaacacgac 22920379  T
Q  202 ct-aaaacaacattttaaaaatca 224  Q
    || |||||||||||||||||||||    
T  22920378 ctaaaaacaacattttaaaaatca 22920355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 15267686 - 15267848
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||| | || |     
T  15267686 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattg 15267785  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaaca 212  Q
     | |||||||| ||| | |  | |||||||||||||| ||||||| |||  | ||||||||||    
T  15267786 tctcagtcctctctaaaaacatccaggcactcaaaactatccaacttacatcttaaaacaaca 15267848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 20011783 - 20011630
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  20011783 tgctctcgggagttttgacgtttttctcactaaatcttcatttttaagctccctattcatctttttaatctaaaaattgacccagtcctctctaaaaaca 20011684  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    | |||||||||||||| ||||||| |||  | || ||||||| |||||||||||    
T  20011683 tccaggcactcaaaactatccaacttacaccttataacaacaatttaaaaatca 20011630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 25624330 - 25624215
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  25624330 tgctctcgggagttttgacatttttctccctaaaacttcatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 25624231  T
Q  171 ttcaggcactcaaaac 186  Q
    ||||||||||||||||    
T  25624230 ttcaggcactcaaaac 25624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14594418 - 14594366
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  14594418 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 14594366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21683357 - 21683305
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21683357 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 21683305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21687706 - 21687654
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21687706 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 21687654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21690099 - 21690047
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21690099 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 21690047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 23652652 - 23652600
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  23652652 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 23652600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20006744 - 20006796
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  20006744 tgctctcggaagttttgacatttttctcactaaatcttcatttttaagctccc 20006796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21685749 - 21685697
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  21685749 tgctctcgggagttttgacatttttctcactaaatattcatttttaagctccc 21685697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 36445429 - 36445377
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  36445429 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 36445377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 20783536 - 20783482
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  20783536 gctgctctcgggagttttgacatttttctcactaaaacttcaattttaagctccc 20783482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 22175732 - 22175678
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  22175732 gctgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 22175678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 20973691 - 20973646
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcattttta 116  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||    
T  20973691 tgctctcgggagttttgacatttttctcactaaaacctcattttta 20973646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 20839603 - 20839551
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  20839603 tgctctcgggagttttgatatttttctcactaaatcttcatttttaagttccc 20839551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 22063247 - 22063195
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  22063247 tgctctcgggagttttgacatttttctcactaaatcatcaattataagctccc 22063195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22744213 - 22744265
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||  |||| | ||||||||||||||||    
T  22744213 tgctctcgggagttttgacatttttctcaataaaacttcatttttaagctccc 22744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 33089387 - 33089439
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  33089387 tgctctcggaagttttgacatttttctcactaaaacttcatttttaagctccc 33089439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 41009138 - 41009086
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||    
T  41009138 tgctctctggagttttgacatttttctcactaaaacctcatttttaagttccc 41009086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 22178103 - 22178154
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  22178103 gctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 22178154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11392262 - 11392210
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || ||||| || |||||||||    
T  11392262 tgctctcgggagttttgacatttttctcactcaaacctcaattataagctccc 11392210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 22025244 - 22025192
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||| ||||||| ||||||| ||| || |||||||||    
T  22025244 tgctctcgggagttttgacaattttctcactaaatcatcaattctaagctccc 22025192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22050715 - 22050767
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||| ||||    
T  22050715 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagttccc 22050767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 31412166 - 31412114
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  31412166 tgctctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 31412114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 31418348 - 31418296
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  31418348 tgctctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 31418296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 19987871 - 19987808
Alignment:
Q  60 cagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||  |||| ||| ||||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  19987871 cagaaaaaggctggtcttgggagttttgacacttttctcactaaatcttcatttttaagttccc 19987808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 1264543 - 1264593
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  1264543 ctctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 1264593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 19860012 - 19860081
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  | ||||||| ||||| || ||||||||||| | ||||| ||||||||||||||||    
T  19860012 ggcgaacagaaaaagggtgctctctggagtgttaacatttttctcacaaaatcttcatttttaagctccc 19860081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 8710998 - 8711236
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||  |||||||| |||||| || |||||||| ||  || |||||||||||||||||| ||| |||||||||||||||||||||||| | |    
T  8710998 tggcgagctcaataaaatgggcaactcgcgatggcgagtaagtcactcgccgtggcgagcagaaaatagctactctcgggagttttgacatttttcacac 8711097  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||  | ||||||| |||||||||||||| |||||||| ||||    
T  8711098 taaatccccatttttaagctccctaattccctttttgatccaaaaacttgcccagtcctctttgtacatgtccaggcactcaaaaccatccaacaaacga 8711197  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8711198 cctaaaacaacattttaaaaatcaaggtttctctctctg 8711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 33662174 - 33661935
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||||||||||||||||||| || || ||||| |||||| | ||||||||  ||||||||||||||||||||||||||||||||||||  |    
T  33662174 tggcgagctcaaggaaatgggctactcgccatggcaagtaagtcgttcgctgtggcgagttgaaaattgctgctctcgggagttttgacatttttctgac 33662075  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctat-acatgttcaggcactcaaaacgatccaacatacg 199  Q
    ||||||||||||||||||||||| ||| | ||||||||||||| ||||||  |||||||| | || | |  | |||||||||||||  |||||||||||     
T  33662074 taaatcctcatttttaagctccctaatcctctttttgatctaaaaacttgatcagtcctctccataaaacatccaggcactcaaaatcatccaacatact 33661975  T
Q  200 acctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  33661974 acctaaaacaacattttaaaaatcaaagtttctttctctg 33661935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 13878231 - 13878461
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||  |||||||| | | || || |||||||||||||| || |||||||||||||||||||||||||||| ||    
T  13878231 ggcgaactcaagaaaataggctactcgctagggcgagtaagttgctcgccatggcgagcagaaaaatggtgctctcgggagttttgacatttttctcact 13878330  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    |||||||||||||||||||||| ||| | ||||||||||||| ||||||   |||| || | ||| |  | |||||||||||||| ||||||||||| ||    
T  13878331 aaatcctcatttttaagctccctaatcctctttttgatctaaaaacttgattagtcttctccataaacatccaggcactcaaaaccatccaacatactac 13878430  T
Q  202 ctaaaacaacattttaaaaatcaaggtttct 232  Q
    |||||||||||||||||||||||| ||||||    
T  13878431 ctaaaacaacattttaaaaatcaaagtttct 13878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 53 - 232
Target Start/End: Complemental strand, 21189513 - 21189334
Alignment:
Q  53 tggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcc 152  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||  ||||||||||| |||||||||||  || | || |||||||||| ||||||||    
T  21189513 tggcgaacagaaaataggtgctctcgggagttttgacatttttctcattaaatcctcatatttaagctccctgatcctctctttgatctaaaaacttgcc 21189414  T
Q  153 cagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtttct 232  Q
    |||||||| |||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  21189413 cagtcctctctatacatgtccaggcactcaaaaccatccaatatacgacctaaaataacattttaaaaatcaaagtttct 21189334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 16371306 - 16371104
Alignment:
Q  19 gggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||| |||||||| | || | ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  16371306 gggctactcgctatggcgagtaagttgtccgccgtggcgagcagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaag 16371207  T
Q  119 ctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaa 218  Q
    ||||| ||| | ||||||||||||| |||||||||||||||| ||| | |  | |||||||||||||| |||||||  ||| |||| || |||||||| |    
T  16371206 ctccctaatcctctttttgatctaaaaacttgcccagtcctctctaaaaacatccaggcactcaaaaccatccaactcacgtcctataagaacattttga 16371107  T
Q  219 aaa 221  Q
    |||    
T  16371106 aaa 16371104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 13881888 - 13882073
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgccc 153  Q
    ||||||||||||| || |||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| | | ||||||||||| ||||||  |    
T  13881888 ggcgagcagaaaaatggtgctctcgagagttttgacatttttctcactaaatcctcatttttaagctccctaatcctccttttgatctaaaaacttgatc 13881987  T
Q  154 agtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    ||||||| | ||| |  |  ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  13881988 agtcctctccataaacatctaggcactcaaaaccatccaacatactacctaaaacaacattttaaaaatcaaagtttctttctctg 13882073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 15416464 - 15416262
Alignment:
Q  19 gggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||| |||||||  | ||||  |||||||||||| |||  | |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  15416464 gggctactcgctatggcgagtaggttgttcgacgtggcgagcagcaaaaaggtgctctcgggagttttgacatttttctcactaaatcttcatttttaag 15416365  T
Q  119 ctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaa 218  Q
    || || |||   | ||||||||||| |||||||||||||||| ||| | |  | |||||||||||||| |||||||  ||| |||| |||||| |||| |    
T  15416364 cttcctaatcatccttttgatctaaaaacttgcccagtcctctctaaaaacatccaggcactcaaaaccatccaactcacgtcctataacaacgttttga 15416265  T
Q  219 aaa 221  Q
    |||    
T  15416264 aaa 15416262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 15075857 - 15076031
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| |  |||||||||||||||||||||||||||| ||||||| |||||||||||||||  | |   |||||| |||||| || |     
T  15075857 cgtggcgagcaagaaaaattatgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccgtattcatctttttaatctaaaaattg 15075956  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
     |||||||||| ||| | |  | |||||||||||||||||||||| |||  | || ||||||| ||| |||||||    
T  15075957 tcccagtcctctctaaaaacatccaggcactcaaaacgatccaacttacatcttataacaacaatttgaaaatca 15076031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 32490262 - 32490335
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| ||||| || |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  32490262 cgtggcgagcaagaaaaatggtgctctcgtgagttttgacatttttctcactaaatcttcatttttaagctccc 32490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 18165953 - 18165901
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  18165953 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 18165901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 30239581 - 30239633
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  30239581 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 30239633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 14555751 - 14555698
Alignment:
Q  70 ctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  14555751 ctgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 14555698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15004780 - 15004728
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  15004780 tgctctcgggagttttgacatttttctcactaaatcttcttttttaagctccc 15004728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15360490 - 15360438
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  15360490 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 15360438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 16228787 - 16228735
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  16228787 tgctctcgggagttttgacatttttctcactgaatcttcatttttaagctccc 16228735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 16485153 - 16485205
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  16485153 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccc 16485205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 17176875 - 17176927
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17176875 tgctttcgggagttttgacatttttctcactaaatcttcatttttaagctccc 17176927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 18261810 - 18261862
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  18261810 tgctctcgggagttttgacatttttgtcactaaatcttcatttttaagctccc 18261862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 18271775 - 18271827
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  18271775 tgctctcgggagttttgacatttttgtcactaaatcttcatttttaagctccc 18271827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 41528752 - 41528700
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  41528752 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 41528700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 53905013 - 53904961
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  53905013 tgctctcgggagttttgacatatttctcactaaatcttcatttttaagctccc 53904961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 10972604 - 10972550
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  10972604 gctgctctcgggagttttgacatttttctcactaaaacttcaattttaagctccc 10972550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 15318458 - 15318556
Alignment:
Q  62 gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    ||||| || |||||||  ||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||||| || |  ||||||||||    
T  15318458 gaaaaatggtgctctcaagagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctaaaaattgtcccagtcctc 15318556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 23122104 - 23122162
Alignment:
Q  60 cagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||  ||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  23122104 cagaaaaaggctgctctcaggagttttgacatttttctcactaaatcctcatttctaag 23122162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 20940759 - 20940828
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| ||||||| || ||||||||| |||||||||||||||||| ||||||| ||| || |||||||||    
T  20940759 ggcgaacagaaaagtggtgctctcggaagttttgacatttttctcactaaatcatcaattctaagctccc 20940828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11170908 - 11170856
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  11170908 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 11170856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14821866 - 14821918
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||| | ||||||||||||||||    
T  14821866 tgctcttgggagttttgacatttttctcactaaaacttcatttttaagctccc 14821918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 224
Target Start/End: Original strand, 15069295 - 15069431
Alignment:
Q  88 acatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacg 187  Q
    ||||||||||| ||||||| |||||||||||||||| | ||  |||||| |||||| || |  |||||| ||| ||| | |  | ||||||||||||||     
T  15069295 acatttttctcactaaatcttcatttttaagctccctatttatctttttaatctaaaaattgtcccagtactctctaaaaacatccaggcactcaaaacc 15069394  T
Q  188 atccaacatacgacctaaaacaacattttaaaaatca 224  Q
    ||||||| |||  | |||||||||| ||| |||||||    
T  15069395 atccaacttacatcttaaaacaacaatttgaaaatca 15069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 15547068 - 15547120
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  15547068 tgctctcggaagttttgacatttttctcactaaaacttcatttttaagctccc 15547120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 19128003 - 19127951
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || ||||| ||||||||||||    
T  19128003 tgctctcgggagttttgacatttttctcactcaaacctcaattttaagctccc 19127951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 10783953 - 10783899
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||||| ||||| | ||| ||||||||||||    
T  10783953 gctgctctcaggagttttgacatttttctcactaaaacttcaattttaagctccc 10783899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 1650742 - 1650673
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  | |||||||||||||||||||||||||||| | ||| | ||||||||||| ||||    
T  1650742 ggcgaacagaaaaggggtgctctcgggagttttgacatttttctcacgaaaacttcatttttaagttccc 1650673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 49051469 - 49051521
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  49051469 tgctctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 49051521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 43284565 - 43284530
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatc 106  Q
    |||||||||||||||||||||||||||| |||||||    
T  43284565 tgctctcgggagttttgacatttttctcactaaatc 43284530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 2972393 - 2972341
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || |||||  | |||||||||    
T  2972393 tgctctcgggagttttgacatttttctcactcaaacctcaaatctaagctccc 2972341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 13454239 - 13454291
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||| | ||| || |||||||||    
T  13454239 tgctctctggagttttgacatttttctcactaaaacttcaattctaagctccc 13454291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14487104 - 14487155
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  14487104 tgctctcgagagttttgaca-ttttctcactaaatcttcatttttaagttccc 14487155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 15325383 - 15325434
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||||||| ||||    
T  15325383 tgctctcgggagttttaaca-ttttctcactaaatcttcatttttaagttccc 15325434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 16999828 - 16999776
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  16999828 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 16999776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 46044530 - 46044478
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  46044530 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 46044478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 47870699 - 47870647
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  47870699 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 47870647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 23375368 - 23375605
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||| ||||||||||||||| || | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  23375368 tggcgagctcaagaaaatgggctactcgccatggagagtaagtcgttccccgtggcgagcagaaaattgctgctctcgggagttttgacatttttcttac 23375467  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| ||| | ||||||||||||| ||||||  |||||||| | ||| |  |  ||||||||||||| |||||||||||||    
T  23375468 taaatcctcatttttaagctccctaatcctctttttgatctaaaaacttgatcagtcctctccataaacatctaggcactcaaaac-atccaacatacga 23375566  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  23375567 cctaaaacaacattttaaaaatcaaagtttctttctctg 23375605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24160717 - 24160937
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||  || ||| |||||||||||||| |||||||| | |||| ||||||||||||||||| || |||| ||||||||||||||||||||||| |    
T  24160717 tggcgagcttcagaaaaagggctactcgctatggcgagtaagttgttcgccgtggcgagcagaaaaatggtgctttcgggagttttgacatttttctcac 24160816  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||| |||| ||| | |  ||||| |||||||||| |||||||  |||     
T  24160817 taaatcttcatttttaagctccctaatcccctttttgatctaaaaacttgtccagccctctctaaaaacattcagacactcaaaaccatccaactcacgt 24160916  T
Q  201 cctaaaacaacattttaaaaa 221  Q
    |||| ||||||||||| ||||    
T  24160917 cctataacaacattttgaaaa 24160937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 40261750 - 40261942
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||| ||||||||||||||| |||||||||||  ||||||| || ||| |||||||||||||||||| | | |||||||||||||||||||||||| | |    
T  40261750 tggcaagctcaaggaaatgg-ctactcgctatgacgagtaagtcattcgccgtggcgagcagaaaatagtttctctcgggagttttgacatttttcacac 40261848  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaac 194  Q
    ||||||||||||||||||||||| |||  | ||||||||| || |||||||||||||||| ||||| || | ||||||| |||||  |||||||    
T  40261849 taaatcctcatttttaagctccctaatctcttttttgatccaaaaacttgcccagtcctctctatatatatccaggcacccaaaatcatccaac 40261942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 25651675 - 25651906
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||| ||| |||||||||||||| ||||||   | |||| ||||||||||||| ||| || |||| ||||||||||||||||||||||| |    
T  25651675 tggcgagctcaagaaaa-gggctactcgctatggcgagttcgttgttcgccgtggcgagcaggaaaatggtgctatcgggagttttgacatttttctcac 25651773  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||| |||||||||||||||| |||   |||||| |||||| || | | ||||||||| ||| | |  | |||||||||||||| ||||||| ||||     
T  25651774 taaatcttcatttttaagctccctaatcatctttttaatctaaaaattagtccagtcctctctaaaaacatccaggcactcaaaaccatccaacttacgt 25651873  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctc 233  Q
    |  | ||||||| ||||||||||| | ||||||    
T  25651874 ctaataacaacaatttaaaaatcatgatttctc 25651906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 24669493 - 24669335
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  24669493 tgctctcgggagttttgacatttttctcactaactcgtcatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 24669394  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtt 229  Q
    |||||||||||||||| ||||||| |||  | || ||||||| ||||||||||||||||    
T  24669393 ttcaggcactcaaaactatccaacttacaccttataacaacaatttaaaaatcaaggtt 24669335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 233
Target Start/End: Original strand, 23085902 - 23086083
Alignment:
Q  53 tggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcc 152  Q
    |||||||||||||||   |||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||    || |||||| || ||||||||    
T  23085902 tggcgagcagaaaataattgctctcgggagttttgacatttttcacactaaattctcatttttaagctccctaatctttttcttgatccaaaaacttgcc 23086001  T
Q  153 cagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacatttt-aaaaatcaaggtttctc 233  Q
    || ||||| ||||| |  | |||||||||||||  |||||||  ||| |||| | ||||||||| |||||||| | ||||||    
T  23086002 caatcctctctataaacatccaggcactcaaaaacatccaacccacgtcctatagcaacattttgaaaaatcatgatttctc 23086083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 22841452 - 22841525
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22841452 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 22841525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 21121290 - 21121132
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |   |||||| |||| | || |  |||||||||| ||| | |      
T  21121290 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctattcatctttttaatctgaaaattgtcccagtcctctctaaaaaca 21121191  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtt 229  Q
    |||||||||||||||| | || || ||  || || ||||||| | ||||||||||||||    
T  21121190 ttcaggcactcaaaactaacctacttataacttataacaacaatctaaaaatcaaggtt 21121132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19035991 - 19036043
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19035991 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 19036043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23149118 - 23149170
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  23149118 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 23149170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23560908 - 23560960
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  23560908 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 23560960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 25267712 - 25267764
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25267712 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 25267764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 23291437 - 23291486
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  23291437 tctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 23291486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 17634402 - 17634454
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  17634402 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccc 17634454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23753299 - 23753351
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  23753299 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 23753351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 25174379 - 25174431
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  25174379 tgctctcgggagttttgacatttttctcaccaaatcttcatttttaagctccc 25174431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 25365589 - 25365537
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  25365589 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 25365537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 32911147 - 32911100
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  32911147 tgctctcgggagttttgacatttttctcactaaatcttcatttttaag 32911100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 22790701 - 22790631
Alignment:
Q  164 atacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacatttt-aaaaatcaaggtttctc 233  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||||||||| |||||||| | ||||||    
T  22790701 atacatgtccaggcactcaaaaccatccaacacacgtcctaaaacaacattttgaaaaatcatgatttctc 22790631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 24943888 - 24943938
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  24943888 ctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 24943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 20913998 - 20913949
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  20913998 tctcggaagttttgacatttttctcactaaatcttcatttttaagctccc 20913949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 24652828 - 24652877
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  24652828 tctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 24652877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 2106082 - 2106134
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  2106082 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 2106134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 8889635 - 8889583
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| |||||||||||||||| ||||||| ||||| ||||||||||    
T  8889635 tgctctcgggaattttgacatttttctcactaaatcttcattcttaagctccc 8889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20648584 - 20648636
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  20648584 tgctctcggaagttttgacatttttctcactaaaacttcatttttaagctccc 20648636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20724521 - 20724573
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  20724521 tgctctcgggagttttgacatttttctcagtaaaacctcatttttaagttccc 20724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 24659269 - 24659321
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||| ||||    
T  24659269 tgctctcgggagttttgacatttttctcactaaatcttaatttttaagttccc 24659321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 25107135 - 25107083
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  25107135 tgctctcgggagttttgatatttttctcactaaatcttcatttttaagttccc 25107083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 19703149 - 19703097
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | | | ||||||||||||    
T  19703149 tgctctcgggagttttgacatttttctcactaaaactttaattttaagctccc 19703097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22810385 - 22810437
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||||| || |||||||| ||||    
T  22810385 tgctctcgggagttttgatatttttctcactaaatcttcttttttaagttccc 22810437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 14564302 - 14564353
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| || || ||||| || ||||||||    
T  14564302 tgctctcgggagttttgacatttttctcactcaaacctcaattctaagctcc 14564353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 19649211 - 19649159
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||| ||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  19649211 tgctttcgggagttttgacatttttctcactaaaacttcaattctaagctccc 19649159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 27272625 - 27272677
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| |||||||||||||||| || |  ||||| ||||||||||||    
T  27272625 tgctctcgggaattttgacatttttctcactcagacctcaattttaagctccc 27272677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 28970950 - 28970910
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttt 94  Q
    ||||| |||||||  ||||||||||||||||||||||||||    
T  28970950 ggcgaacagaaaaaggctgctctcgggagttttgacatttt 28970910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 28204329 - 28204091
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||  |    
T  28204329 tggcgagctcaaggaaatgggctactcgcgatggcgagtaagtcgttcgccatggcgagcagaaaattgctgctctcgggagttttgacatttttctgac 28204230  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||| ||| ||| | ||||||||||||| ||||||  |||||||| | ||| |  | |||||||||||||| ||| ||||||| |    
T  28204229 taaatcctcatttttaagcgccctaatcctctttttgatctaaaaacttgatcagtcctctccataaacatccaggcactcaaaactatcgaacatacta 28204130  T
Q  201 cctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    ||||||| ||||||||||||||||| |||||| ||||||    
T  28204129 cctaaaataacattttaaaaatcaaagtttctttctctg 28204091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 20901584 - 20901821
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||||| || ||||||||  |||||||||||||||||| ||    
T  20901584 ggcgaactcaagaaaataggctactcgctatggcgagtaagttgttcgccgtggcgagcagaaaaatggtgctctcgaaagttttgacatttttctcact 20901683  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||| |||||||||||||| | ||    |||||| || ||| || | ||||||||||| | ||  |  | |||||||||||||| |||| |||||||||    
T  20901684 aaatcttcatttttaagctctctaaacatctttttaatataaaaattggcccagtcctctccattaacatccaggcactcaaaaccatccgacatacgac 20901783  T
Q  202 ctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  20901784 ctaaaacaacattttaaaaatcaaagtttctttctctg 20901821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 14800939 - 14801058
Alignment:
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    |||||| ||||||||||||||| |||||||||||||||| || |||||||| ||||||| ||||| ||||  ||||||||| ||| |||||||  |||||    
T  14800939 aaatccccatttttaagctccctaattccctttttgatccaaaaacttgcctagtcctctctatatatgtcaaggcactcataaccatccaacccacgac 14801038  T
Q  202 ctaaaacaacattttaaaaa 221  Q
    |||||||| |||||| ||||    
T  14801039 ctaaaacagcattttcaaaa 14801058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 14809813 - 14809932
Alignment:
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    |||||| ||||||||||||||| |||||||||||||||| || |||||||| ||||||| ||||| ||||  ||||||||| ||| |||||||  |||||    
T  14809813 aaatccccatttttaagctccctaattccctttttgatccaaaaacttgcctagtcctctctatatatgtcaaggcactcataaccatccaacccacgac 14809912  T
Q  202 ctaaaacaacattttaaaaa 221  Q
    |||||||| |||||| ||||    
T  14809913 ctaaaacagcattttcaaaa 14809932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 21527332 - 21527161
Alignment:
Q  53 tggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcc 152  Q
    |||||||||  ||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||  |||||| |||||| || | ||     
T  21527332 tggcgagcaagaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcgctaattatctttttaatctaaaaattggca 21527233  T
Q  153 cagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    |||||||  ||| | |  | ||||||||||||||  |||||| |||| | || |||||||||||||||||||    
T  21527232 cagtcctatctaaaaacatccaggcactcaaaaccgtccaacttacgtcttataacaacattttaaaaatca 21527161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 8685740 - 8685914
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||||| || |     
T  8685740 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctaaaaattg 8685839  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
     || ||||||| ||| | |    |||||||||||||| || |||| |||  | || |||||||||||||||||||    
T  8685840 tccaagtcctctctaaaaacacccaggcactcaaaaccattcaacttacatcttataacaacattttaaaaatca 8685914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 21734087 - 21733929
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |   |||||| |||| | || |  |||||||||| ||| | |      
T  21734087 tgctctcgggagttttgacatttttctcactaaatcctcatttttaagctccctattcatctttttaatctgaaaattgtcccagtcctctctaaaaaaa 21733988  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtt 229  Q
    | |||||||||||||| | ||||| ||   | || ||||||| ||||||||||||||||    
T  21733987 tccaggcactcaaaactaaccaacttataccttataacaacaatttaaaaatcaaggtt 21733929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 8683554 - 8683627
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  8683554 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 8683627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 24475850 - 24476005
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |||   |||||| |||||| || |  |||||||||| ||| | |      
T  24475850 tgctctcgggagttttgatatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 24475949  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaag 226  Q
    |  ||||||||||||| ||||||| |||  | || ||||||| ||| |||||||||    
T  24475950 tcaaggcactcaaaactatccaacttacaccttataacaacaatttgaaaatcaag 24476005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15316172 - 15316120
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15316172 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 15316120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21410344 - 21410292
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21410344 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 21410292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 25091950 - 25091798
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||   |||||| |||||| || |   ||||||||| ||| | |      
T  25091950 tgctctcgggagttttgacatttttctcactaaatcttcatttttgagctccctaatcatctttttaatctaaaaattgttccagtcctctctaaaaaca 25091851  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatc 223  Q
    | |||||||||||||| ||||||| |||  | || ||||||| ||| ||||||    
T  25091850 tccaggcactcaaaactatccaacttacaccttataacaacaatttgaaaatc 25091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 3706452 - 3706393
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  3706452 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcctcattt 3706393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 21745268 - 21745110
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||  | |   |||||| |||||| || |  || ||||||| ||| | |      
T  21745268 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccatattcatctttttaatctaaaaattgtccaagtcctctctaaaaaca 21745169  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtt 229  Q
    | |||||||||||||| ||||||  |||  | || ||||||| ||||||||||||||||    
T  21745168 tccaggcactcaaaactatccaaattacaccttataacaacaatttaaaaatcaaggtt 21745110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 23631456 - 23631518
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  23631456 agaaaatgggtgctctcgggagttttgacatttttctcactaaatcttcattttaaagctccc 23631518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 41312659 - 41312708
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  41312659 tctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 41312708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 5381139 - 5381191
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  5381139 tgctctcgagagttttgacatttttctcactaaatcttcatttttaagctccc 5381191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19853530 - 19853582
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19853530 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 19853582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19859665 - 19859717
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19859665 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 19859717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21732984 - 21733036
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  21732984 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 21733036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21986569 - 21986517
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  21986569 tgctctcgggagttttgacatttttctcactaaatcttcacttttaagctccc 21986517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 22434622 - 22434570
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  22434622 tgctctcgggagttttgacatttttctcactaaatcatcaattttaagctccc 22434570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23712704 - 23712756
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  23712704 tgctctcgggagttttgacatttttctcactaaatcttcattttaaagctccc 23712756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 24238075 - 24238023
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  24238075 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 24238023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 20837881 - 20837818
Alignment:
Q  60 cagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||| || |||||||| ||||    
T  20837881 cagaaaaaggctgctctcgggagttttgacatttttctcactaaatcttcctttttaagttccc 20837818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 31926982 - 31926933
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagct 120  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  31926982 tgctctcaggagttttgacatttttctcactaaatcttcatttttaagct 31926933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 954757 - 954705
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  954757 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 954705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 19666397 - 19666345
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||    
T  19666397 tgctctcggaagttttgacatttttctcactaaatcttcatttttaagttccc 19666345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 20595780 - 20595728
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||| |||||||    
T  20595780 tgctctcgggagttttgacatttttctcactaaatcatcaatttttagctccc 20595728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20849535 - 20849587
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  20849535 tgctctccggagttttgacatttttctcactaaatcttcacttttaagctccc 20849587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 21698609 - 21698657
Alignment:
Q  75 ctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  21698609 ctcgggagttttcacatttttctcactaaatcttcatttttaagctccc 21698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 16883220 - 16883173
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  16883220 tgctctcggaagttttgacatttttctcactaaatcttcatttttaag 16883173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 20941543 - 20941474
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  | |||||||| |||||||| |||||||||| ||||||| ||||||||||| ||||    
T  20941543 ggcgaacagaaaaaggatgctctcgagagttttgtcatttttctcactaaatcttcatttttaagttccc 20941474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20243051 - 20243103
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| | ||||||| ||| || |||||||||    
T  20243051 tgctctcgggagttttgacatttttcgcactaaatcatcaattctaagctccc 20243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21664674 - 21664726
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||| |||||||||||  |||||| ||||||||||| ||||    
T  21664674 tgctctcgggagttttaacatttttctcagtaaatcttcatttttaagttccc 21664726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 30491106 - 30491054
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| ||| |||||||| ||||||||| ||||||| ||||||||||||||||    
T  30491106 tgctcacggaagttttgatatttttctcactaaatcttcatttttaagctccc 30491054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 36917589 - 36917641
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || ||||| || |||||||||    
T  36917589 tgctctcgggagttttgacatttttctcactcaaacctcaattctaagctccc 36917641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 20824048 - 20823989
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  ||||||| |||||||||||| ||||||||| ||||||| ||||||    
T  20824048 ggcgaacagaaaaaggctgctcacgggagttttgatatttttctcactaaatcttcattt 20823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 29554116 - 29554069
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||| |||||||||||||||| || ||||||| |||||||||||    
T  29554116 tgctctcgagagttttgacatttttttcactaaatcttcatttttaag 29554069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 29601932 - 29601881
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||| || || ||||| || |||||||||    
T  29601932 gctctcgggagttttgacatttttctcactcaaacctcaattctaagctccc 29601881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 43088851 - 43088894
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttt 114  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||    
T  43088851 tgctctcgggagttttgtcatttttctcactaaatcttcatttt 43088894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 19336297 - 19336335
Alignment:
Q  85 ttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  19336297 ttgacatttttctcactaaatcttcatttttaagctccc 19336335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 36615395 - 36615445
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||    
T  36615395 tgctctcgggagttttgacatttttctcactaaaacttcaattctaagctc 36615445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21921270 - 21921322
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| |||||||||||||||| || || ||||| || |||||||||    
T  21921270 tgctctcgggaattttgacatttttctcactcaaacctcaattctaagctccc 21921322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 24108678 - 24108626
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  24108678 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 24108626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 49328504 - 49328556
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  49328504 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 49328556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 30206212 - 30205975
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||| |||||||  | |||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  30206212 ggcgaactcaagaaaataggctactcgctatggcgagtatgttgttcgccgtggcgagcagaaaaatggtgctctcgggagttttgacatttttctcact 30206113  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||| |||||||||||||||| ||| | ||||||||||||| ||||||  |||||||| | ||| |  | |||||||||||||  ||||||||||| ||    
T  30206112 aaatcttcatttttaagctccctaatcctctttttgatctaaaaacttgatcagtcctctccataaacatccaggcactcaaaatcatccaacatactac 30206013  T
Q  202 ctaaaacaacattttaaaaatcaaggtttctctctctg 239  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30206012 ctaaaacaacattttaaaaatcaaggtttctttctctg 30205975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 11325615 - 11325409
Alignment:
Q  15 aaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttt 114  Q
    |||||||||||||||||| |||||||| | |||| |||||| |||||||||| || ||||||||||||||||||||||||| || ||||||| |||||||    
T  11325615 aaatgggctactcgctatggcgagtaagttgttcgccgtggagagcagaaaaatgatgctctcgggagttttgacatttttttcactaaatcttcatttt 11325516  T
Q  115 taagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacatt 214  Q
    ||||||||| ||| ||||||||||||||| ||||||| |||||||| ||| | |  | |||||||||||||| |||||||  ||| |||| |||||||||    
T  11325515 taagctccctaatcccctttttgatctaaaaacttgctcagtcctctctaaaaacatccaggcactcaaaaccatccaactcacgtcctataacaacatt 11325416  T
Q  215 ttaaaaa 221  Q
    || ||||    
T  11325415 ttgaaaa 11325409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 24284098 - 24284046
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24284098 tgctctcgggagttttgacatttttctcactaaatcctcatttttaagctccc 24284046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 15232701 - 15232860
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||| | || |  || |||||||    
T  15232701 agaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattgtcctagtcctc 15232800  T
Q  161 cctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaa 220  Q
     ||| | || | |||||||||||||| ||| ||| |||| | || | ||||| |||||||    
T  15232801 tctaaaaatatccaggcactcaaaaccatctaacttacgtcttatagcaacaatttaaaa 15232860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 15238569 - 15238728
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||| | || |  || |||||||    
T  15238569 agaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattgtcctagtcctc 15238668  T
Q  161 cctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaa 220  Q
     ||| | || | |||||||||||||| ||| ||| |||| | || | ||||| |||||||    
T  15238669 tctaaaaatatccaggcactcaaaaccatctaacttacgtcttatagcaacaatttaaaa 15238728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 15954640 - 15954578
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15954640 agaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 15954578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 12153363 - 12153415
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12153363 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 12153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 12363881 - 12363933
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12363881 tgctctcgggagttttgacatttttctccctaaatcttcatttttaagttccc 12363933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 13036648 - 13036600
Alignment:
Q  75 ctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13036648 ctcgggagttttgacatttttctcactaaatcctcatttttaagctccc 13036600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15011587 - 15011535
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15011587 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 15011535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 16823478 - 16823426
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  16823478 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 16823426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 17496634 - 17496686
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17496634 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 17496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 42109693 - 42109745
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  42109693 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 42109745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 12855536 - 12855374
Alignment:
Q  62 gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctcc 161  Q
    ||||| || |||||| |||||||||| |||||||||| ||||||| |||||||||||||||| |||   |||||| |||||| || |  || |||||||     
T  12855536 gaaaaatggtgctcttgggagttttgccatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctaaaaattgtcctagtcctct 12855437  T
Q  162 ctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    ||| | |  |||||||||||||||| | ||||| |||  | || ||||||| ||| |||||||    
T  12855436 ctaaaaacattcaggcactcaaaactaaccaacttacatcttataacaacaatttgaaaatca 12855374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 10597365 - 10597296
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  10597365 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 10597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 2269929 - 2269877
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  2269929 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 2269877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11305438 - 11305386
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  11305438 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 11305386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11644485 - 11644433
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  11644485 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 11644433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11939580 - 11939528
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  11939580 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 11939528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 12355650 - 12355598
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  12355650 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 12355598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 12362199 - 12362147
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  12362199 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 12362147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 13692436 - 13692488
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  13692436 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 13692488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 18128238 - 18128186
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  18128238 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 18128186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 15934625 - 15934574
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  15934625 tgctctcgggagttttgatatttttctcactaaatcttcatttttaagctcc 15934574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 14288706 - 14288656
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  14288706 ctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 14288656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 17198719 - 17198665
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  17198719 gctgctttcgggagttttgacatttttctcactaaatcctcattttcaagttccc 17198665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 16829655 - 16829586
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| ||||||  || |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  16829655 ggcgaacagaaatatggtgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 16829586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 16838178 - 16838109
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| ||||||  || |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  16838178 ggcgaacagaaatatggtgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 16838109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11964606 - 11964554
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||    
T  11964606 tgctctcgggtgttttgacatttttctcactaaatcttcatttttaagttccc 11964554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 12479374 - 12479322
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  12479374 tgctctcgggagttttgacatttttcccactaaatcttcatttttaagttccc 12479322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14293218 - 14293270
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  14293218 tgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 14293270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14298845 - 14298897
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  14298845 tgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 14298897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 15518971 - 15519015
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcattttt 115  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  15518971 tgctctcgggagttttgacatttttctcactaaatcttcattttt 15519015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 18136008 - 18135956
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||| ||||    
T  18136008 tgctctcgggagttttgacatttttctcattaaatcttcatttttaagttccc 18135956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 18718815 - 18718763
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  18718815 tgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 18718763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 12274764 - 12274815
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||| |||||||| |||||||||||| ||||||| |||||||||||||||    
T  12274764 tgctctagggagtttcgacatttttctcactaaatcttcatttttaagctcc 12274815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 12202791 - 12202837
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaa 117  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  12202791 tgctctcaggagttttgacatttttctcactaaatcttcatttttaa 12202837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 12961069 - 12961024
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcattttta 116  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||    
T  12961069 tgctctcggaagttttgacatttttctcactaaatcttcattttta 12961024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 12255633 - 12255685
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| | | || |||||||||    
T  12255633 tgctctcgggagttttgacatttttctcactaaatcttaaattctaagctccc 12255685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 12256078 - 12256130
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| | | || |||||||||    
T  12256078 tgctctcgggagttttgacatttttctcactaaatcttaaattctaagctccc 12256130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14652409 - 14652357
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| ||| || |||||||||    
T  14652409 tgctctagggagttttgacatttttctcactaaatcatcaattctaagctccc 14652357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 18961416 - 18961468
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  18961416 tgctctcgggagttttgacatttttctcactaaaacatcaattctaagctccc 18961468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 35985195 - 35985247
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||| ||||||||||||||||||| ||| | | ||||||||||||||||    
T  35985195 tgctctcgagagttttgacatttttctcactagaacttcatttttaagctccc 35985247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 49163622 - 49163674
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| ||||||||||||    
T  49163622 tgctctcgggagttttgacatttttctcactcaaacttcaattttaagctccc 49163674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 16349079 - 16349140
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||| ||| || |||||||||    
T  16349079 agaaaaatggtgctctcgggagttt-gacatttttctcactaaatcatcaattctaagctccc 16349140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 20376933 - 20376883
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| || || ||||| || |||||||||    
T  20376933 ctctcgggagttttgacatttttctcactcaaacctcaattctaagctccc 20376883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 16382591 - 16382523
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| ||||||| || ||||||||||||||| |||||||||||| | ||||| ||| || |||||||||    
T  16382591 ggcgaacagaaaaatggtgctctcgggagttt-gacatttttctcacgaaatcatcaattctaagctccc 16382523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 12419919 - 12419967
Alignment:
Q  75 ctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  12419919 ctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 12419967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 15375100 - 15375152
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| |||||||||||||||| || || ||||| || |||||||||    
T  15375100 tgctctcgggaattttgacatttttctcactcaaacctcaattctaagctccc 15375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 46070804 - 46070752
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || || || || |||||||||    
T  46070804 tgctctcgggagttttgacatttttctcactcaaaccccaattctaagctccc 46070752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 23620826 - 23620590
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||||| || |||||||||||||||||||||||||| | ||    
T  23620826 ggcgaactcaagaaaataggctactcgctatggcgagtaagttgttcgccgtggcgagcagaaaaatggtgctctcgggagttttgacatttttcacact 23620727  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    |||||  ||||||||||||||| ||| | ||||||||||||| ||||||  |||||||| | ||| |  | |||||||||||||| ||||||||||| ||    
T  23620726 aaatctccatttttaagctccctaatcctctttttgatctaaaaacttgatcagtcctctccataaacatccaggcactcaaaaccatccaacatactac 23620627  T
Q  202 ctaaaacaacattttaaaaatcaaggtttctctctct 238  Q
    |||||||||||||||||||||||| |||||| |||||    
T  23620626 ctaaaacaacattttaaaaatcaaagtttctttctct 23620590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17526757 - 17526977
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||||||| |||||||||||||| |||||||  | |||  ||||||||||||| ||| || ||||||| |||||||||||||||||||| |    
T  17526757 tggcgagctcaaggaaaagggctactcgctatggcgagtacgttgtttgccgtggcgagcaggaaaatggtgctctcaggagttttgacatttttctcac 17526856  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||| |||||||||||||||  ||| ||||||||||||||| || | ||||||||||| ||| | |  | |||||||||||||| ||||||| | ||     
T  17526857 taaatcttcatttttaagctccgtaatcccctttttgatctaaaaattggcccagtcctctctaaaaacatccaggcactcaaaaccatccaactttcgt 17526956  T
Q  201 cctaaaacaacattttaaaaa 221  Q
    |||| ||||||||||||||||    
T  17526957 cctataacaacattttaaaaa 17526977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 18138068 - 18138221
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||    ||||| |||||| || | |||||| |||| ||| | | |    
T  18138068 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatttttttaatctaaaaattggcccagccctctctaaaaacg 18138167  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    |  ||||||||||||| ||||||| |||  | || |||||||||||||||||||    
T  18138168 tctaggcactcaaaaccatccaacttacatcttataacaacattttaaaaatca 18138221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19468333 - 19468385
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19468333 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 19468385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 1593249 - 1593308
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  1593249 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcctcattt 1593308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 9185517 - 9185447
Alignment:
Q  51 cgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||  ||| || |||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  9185517 cgtggcgagcaagaaaatgatgctctcgggagttttgacatttttctcactaaatcttcattcttaagctc 9185447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 19819409 - 19819458
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19819409 tctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 19819458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14615951 - 14615899
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  14615951 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 14615899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19451784 - 19451836
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19451784 tgctcttgggagttttgacatttttctcactaaatcttcatttttaagctccc 19451836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 22798187 - 22798135
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  22798187 tgctctcgagagttttgacatttttctcactaaatcttcatttttaagctccc 22798135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23105702 - 23105754
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  23105702 tgctctcgggagttttgacatttttctcactaaatcttcatttttaaactccc 23105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 18786579 - 18786634
Alignment:
Q  68 tgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  18786579 tgctgctctcgggagttttgacatttttctcactaaaacttcaattttaagctccc 18786634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 21724436 - 21724377
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  |||||||||||| ||||||||||||||||| ||||||||||||||    
T  21724436 ggcgaacagaaaaaggctgctctcgggtgttttgacatttttctcactaaatcctcattt 21724377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 24721108 - 24721159
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  24721108 tgctctcgggagttttaacatttttctcactaaatcttcatttttaagctcc 24721159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 17414503 - 17414556
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  17414503 gctgctctcgggagttttgacatttttctcactaaaacttcaattttaagctcc 17414556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 21476796 - 21476885
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    |||||||||||||||||||||||||||| ||||| | ||| |||||||||||| |||   |||||| |||||| || |  ||||||||||    
T  21476796 tgctctcgggagttttgacatttttctcactaaaacttcaattttaagctccctaatcatctttttaatctaaaaattgtcccagtcctc 21476885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 18315645 - 18315593
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  18315645 tgctctcgggagttttgacatttttctcactaaaacttcaattttaagctccc 18315593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 19588250 - 19588198
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||| ||||    
T  19588250 tgctctcgggagttttgacatttttctcactaaaaccacatttttaagttccc 19588198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22907469 - 22907521
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  22907469 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 22907521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 26418330 - 26418278
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  26418330 tgctctcgggagttttgacatttttctcactaaaacttcaattttaagctccc 26418278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 14374989 - 14374942
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  14374989 tgctatcgggagttttgacatttttctcactaaaacctcatttttaag 14374942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 23233082 - 23233035
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  23233082 tgctctctggagttttgacatttttctcactaaatcttcatttttaag 23233035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 933955 - 933903
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||||| ||| || |||||||||    
T  933955 tgctctcaggagttttgacatttttctcactaaatcatcaattctaagctccc 933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 13940905 - 13940956
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  13940905 tgctctcgggagttttgaca-ttttctcactaaatcttcatttttaagttccc 13940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19727121 - 19727173
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| |  |||||||||    
T  19727121 tgctctcgggagttttgacatttttctcactaaatcatcaatcctaagctccc 19727173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21470295 - 21470347
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||| ||| ||||| | ||| ||||||||||||    
T  21470295 tgctctcgggagttttgacattttcctcactaaaacttcaattttaagctccc 21470347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 23234594 - 23234542
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  23234594 tgctctcgggagttttgacatttttctcactaaaacatcaattctaagctccc 23234542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 27767832 - 27767884
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || ||||| || |||||||||    
T  27767832 tgctctcgggagttttgacatttttctcactcaaacctcaattctaagctccc 27767884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 2708882 - 2708925
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaa 117  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||    
T  2708882 tctcgggagtttcgacatttttctcactaaatcttcatttttaa 2708925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 25773183 - 25773271
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    |||||||||||||||||||| ||||||| ||||| | ||| |||||||||||| |||   |||||| |||||| || |  ||||||||||    
T  25773183 tgctctcgggagttttgaca-ttttctcactaaaacttcaattttaagctccctaatcatctttttaatctaaaaattgtcccagtcctc 25773271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 28289882 - 28289814
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| ||||||| || ||||||||||||||| |||| ||||||| ||||||| ||| || |||||||||    
T  28289882 ggcgaacagaaaagtggtgctctcgggagtttcgaca-ttttctcactaaatcatcaattctaagctccc 28289814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 28359500 - 28359463
Alignment:
Q  86 tgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  28359500 tgacatttttctcactaaatcctcatttctaagctccc 28359463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 1584793 - 1584841
Alignment:
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttg 150  Q
    |||||| |||||||||||| || |||||||||||||||| || ||||||    
T  1584793 aaatccccatttttaagcttcctaattccctttttgatccaaaaacttg 1584841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 12446879 - 12446827
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  12446879 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 12446827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 13127959 - 13127907
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| || || ||||| || |||||||||    
T  13127959 tgctcttgggagttttgacatttttctcgctcaaacctcaattctaagctccc 13127907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 17207421 - 17207369
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  17207421 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 17207369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 11310 - 11075
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||| |||||||| | |||| || |||||||||||||| || |||||||||||||||||||||||||||| ||    
T  11310 ggcgaactcaagaaaataggctactcgctatggcgagtaagttgttctccttggcgagcagaaaaatggtgctctcgggagttttgacatttttctcact 11211  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||| |||||||||||||||| ||| | ||||||||||||| ||||||  |||||||| | ||| |  |  ||||||||||||| ||||||||||| ||    
T  11210 aaatcttcatttttaagctccctaatcctctttttgatctaaaaacttgatcagtcctctccataaacatctaggcactcaaaaccatccaacatactac 11111  T
Q  202 ctaaaacaacattttaaaaatcaaggtttctctctct 238  Q
    || ||||||||||||||||||||| |||||| |||||    
T  11110 ct-aaacaacattttaaaaatcaaagtttctttctct 11075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 719 - 938
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| || |||||||||| |||||||| | |||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  719 ggcgaactcaagaaaataggatactcgctatggcgagtaagttgttcgccgtggcgagcagaaaaatggtgctctcgggagttttgacatttttctcact 818  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||| |||||||||||||||| ||| | ||||||||| ||| ||||||  |||||||| ||||| |  | |||||||||||||| ||||||||||| ||    
T  819 aaatcttcatttttaagctccctaatcctctttttgatataaaaacttgatcagtcctctctataaacatccaggcactcaaaaccatccaacatactac 918  T
Q  202 ctaaaacaacattttaaaaa 221  Q
     |||||||||||||||||||    
T  919 ttaaaacaacattttaaaaa 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34507 - 34279
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||| ||||||| ||||| ||||||| || || ||||||||  ||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |  |    
T  34507 tggcaagctcaaagaaataggctacttgcgatggcgagtaagccgttcgccgtggcgagcagaaaattgctgctatcggtagttttgacattttt-tgac 34409  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||| | ||| |  | |||||||||||||| ||||||||||| |    
T  34408 taaatcctcatttttaagctccttaattctctttttgatctaaaaacttgatcagtcctctccataaacatccaggcactcaaaaccatccaacatacta 34309  T
Q  201 cctaaaacaacattttaaaaatcaaggttt 230  Q
    ||||||||||||||||||||||||| ||||    
T  34308 cctaaaacaacattttaaaaatcaaagttt 34279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 97 - 45
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  97 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 45  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 6254 - 6204
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  6254 ctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 6204  T

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Target: scaffold0388 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 15707 - 15488
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    |||||||||||| |||| ||||||||||||| || ||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  15707 ggcgagctcaagaaaataggctactcgctatggcaagtaagttgttcgccgtggcgagcagaaaattgctgctcttgggagttttgacatttttctcact 15608  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||||||||||| |||||||| ||| | ||||||||||||| |||||| ||||||||| ||||| |  | |||||||||||||  |||||||  ||| |    
T  15607 aaatcctcattttcaagctccctaatcctctttttgatctaaaaacttgaccagtcctctctataaacatccaggcactcaaaaacatccaacccacgtc 15508  T
Q  202 ctaaaacaacattttaaaaa 221  Q
    ||| |||||| |||| ||||    
T  15507 ctataacaacgttttgaaaa 15488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21980627 - 21980394
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| ||   |  ||||||||||||||||| |||||||||||||||||||| ||||||| | |    
T  21980627 tggcgagctcaaggaaatgggctactcgctatggcgagtaagtcacacgtcgtggcgagcagaaaatagctgctctcgggagttttgatatttttcacac 21980528  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||||||||||||||||||||  || |||||||||||| || |||||| | ||||||  |||||||| | |||||||||||||| |||||||  |||     
T  21980527 taaatcctcatttttaagctccctgatcccctttttgatccaaaaacttgactagtcctatctatacatatccaggcactcaaaaccatccaacccacgt 21980428  T
Q  201 cctaaaacaac-attttaaaaatcaaggtttctc 233  Q
    |||| |||||| |||| |||||||| | ||||||    
T  21980427 cctataacaacaatttgaaaaatcatgttttctc 21980394  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 21553944 - 21553773
Alignment:
Q  50 ccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||| | |||||||||||||||||||||||| | | |||||||| ||| || |||||    
T  21553944 ccgtggcgagcagaaaatagctactctcaggagttttgacatttttcacactaaatcctcatttttaagctccctagtcccctttttcatccaaaaactt 21553845  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaa 221  Q
    ||||| ||||| |||||||| | |||||||||||||| |||||||  ||| |||| ||| ||||||| ||||    
T  21553844 gcccaatcctctctatacatatccaggcactcaaaaccatccaacccacgtcctataacgacattttgaaaa 21553773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 7785631 - 7785853
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctcc 99  Q
    ||||||||| ||| ||| ||||||||||| || ||||||   | |||| |||||||||||| |||||||| |||||||| |||||||||||||||||||     
T  7785631 tggcgagctgaagaaaa-gggctactcgcgatggcgagttcgttgttcgccgtggcgagcaggaaaattg-tgctctcgagagttttgacatttttctca 7785728  T
Q  100 ctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacg 199  Q
    ||||||| |||||||||||||||| |||   ||||||||||||| || | | ||||||||| ||| | |  | | | || ||||||| ||||||| ||||    
T  7785729 ctaaatcttcatttttaagctccctaatcatctttttgatctaaaaattggtccagtcctctctaaaaacatccggtcattcaaaaccatccaacttacg 7785828  T
Q  200 acctaaaacaacattttaaaaatca 224  Q
     | || ||||||| |||||||||||    
T  7785829 tcttataacaacaatttaaaaatca 7785853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 15193677 - 15193613
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcccca 125  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  15193677 agaaaaatgatgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcccca 15193613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 18819417 - 18819469
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18819417 tgctctcgggagttttgacatttttctcactaaatcctcatttttaagctccc 18819469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21901528 - 21901476
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21901528 tgctctcgggagttttgacatttttctcactaaatcctcatttttaagctccc 21901476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 26706881 - 26706943
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26706881 agaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 26706943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 26976615 - 26976677
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26976615 agaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 26976677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 22232403 - 22232334
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  22232403 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 22232334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 22237556 - 22237487
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  22237556 ggcgatcagaaaaaggctgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 22237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 427699 - 427751
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  427699 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 757981 - 757917
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  757981 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcctcatttctaag 757917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21495375 - 21495427
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  21495375 tgctctcgggagttttgacatttttctcactaaatcctcatttataagctccc 21495427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21889064 - 21889116
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  21889064 tgctctcgggagttttgacatttttctcactaaatccgcatttttaagctccc 21889116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 23443849 - 23443797
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  23443849 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 23443797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 23561260 - 23561209
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23561260 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcc 23561209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 20843544 - 20843594
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  20843544 tgctctcgggagttttgacatttttctcactaaatcatcatttttaagctc 20843594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 22500240 - 22500166
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaa 143  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||| |   |||||||||||||    
T  22500240 gctgctctcgggagttttgacatttttctcactaaatcctcatttccaagttccccattcaactttttgatctaa 22500166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 17022446 - 17022394
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  17022446 tgctctcggtagttttgacatttttctcactaaatcttcatttttaagctccc 17022394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21830015 - 21830067
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  21830015 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 21830067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22379954 - 22380006
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  22379954 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 22380006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 25014066 - 25014114
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagct 120  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  25014066 gctctcgggagttttgacatttttctcactaaatcttcatttttaagct 25014114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 6404165 - 6404113
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||    
T  6404165 tgctctcggaagttttgacatttttctcactaaatcttcatttttaagttccc 6404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 27635543 - 27635489
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  27635543 gctgctctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 27635489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 10035625 - 10035678
Alignment:
Q  71 tgctctcgggagttttgaca-tttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||| ||||| || ||||||| ||||||||||||||||    
T  10035625 tgctctcgggagttttgacattttttttcactaaatcttcatttttaagctccc 10035678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 20938112 - 20938161
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  20938112 tctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 20938161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 19801583 - 19801540
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttt 114  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||    
T  19801583 tgctttcgggagttttgacatttttctcactaaatcttcatttt 19801540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 20990763 - 20990824
Alignment:
Q  62 gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| | |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  20990763 gaaaataggtgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 20990824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 5338041 - 5337989
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  5338041 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 5337989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 22312494 - 22312462
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaa 103  Q
    |||||||||||||||||||||||||||| ||||    
T  22312494 tgctctcgggagttttgacatttttctcactaa 22312462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 23075979 - 23075927
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  23075979 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 23075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 24058066 - 24058118
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  24058066 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 24058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 25420292 - 25420344
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  25420292 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 25420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 39608560 - 39608508
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  39608560 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 39608508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 4923 - 5142
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| |||||||| |||| |||||||| |  ||| |||||||||||| |||| || |||||||||||||||||||||||||||| ||    
T  4923 ggcgaactcaagaaaataggctactctctatggcgagtaagttattcgccgtggcgagcaaaaaaatggtgctctcgggagttttgacatttttctcact 5022  T
Q  102 aaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgac 201  Q
    ||||| |||||||||||||||  ||| | ||||||||||||| ||||||  | |||||| ||||| |  | |||||||||||||| ||||||||||| ||    
T  5023 aaatcttcatttttaagctccttaatcctctttttgatctaaaaacttgatccgtcctctctataaacatccaggcactcaaaaccatccaacatactac 5122  T
Q  202 ctaaaacaacattttaaaaa 221  Q
     |||||||||||||||||||    
T  5123 ttaaaacaacattttaaaaa 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10105 - 10253
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |  |    
T  10105 tggcgagctcaaggaaatgggctactcgctatggcgagtaagtcgttcgccgtggcgagcagaaaattgctgctctcgggagttttgaca-ttttgtgac 10203  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttg 150  Q
    |||||| |||||||||||||||| ||| | ||||||||||||| ||||||    
T  10204 taaatcttcatttttaagctccctaatcctctttttgatctaaaaacttg 10253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 4674 - 4622
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  4674 tgctctcaggagttttgacatttttctcactaaatcttcatttttaagctccc 4622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7972 - 8205
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||||||| |||||||||||||| |||||||| || ||| ||||||||||||||||||   |||||||||||||||||||||||||| | |    
T  7972 tggcgagctcaaggaaaagggctactcgctatggcgagtaagtcattcgccgtggcgagcagaaaataattgctctcgggagttttgacatttttcacac 8071  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    ||||||||||||||||||||||| |||    || |||||| || || ||||||||||||| ||||| |  | |||||||||||||  |||||||  |||     
T  8072 taaatcctcatttttaagctccctaatctttttcttgatccaaaaaattgcccagtcctctctataaacatccaggcactcaaaaacatccaacccacgt 8171  T
Q  201 cctaaaacaacatttt-aaaaatcaaggtttctc 233  Q
    |||| ||||||||||| |||||||| | ||||||    
T  8172 cctataacaacattttgaaaaatcatgatttctc 8205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 194
Target Start/End: Complemental strand, 6682 - 6549
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    |||||| || ||||||| |||||||||||||||||||| ||||||| |||||||||||||||| | |   |||||| |||||| || |  | ||||||||    
T  6682 agaaaaatggtgctctcaggagttttgacatttttctcactaaatcttcatttttaagctccctattcatctttttaatctaaaaattgtctcagtcctc 6583  T
Q  161 cctatacatgttcaggcactcaaaacgatccaac 194  Q
     ||| | |  |||||||||||||||| |||||||    
T  6582 tctaaaaacattcaggcactcaaaactatccaac 6549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 26510 - 26346
Alignment:
Q  57 gagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagt 156  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||  || |||||||||||     
T  26510 gagcagaaaatagctgctctcgggagttttgacatttttcacactaaatccccatttttaagctccctaattccctttttgatacaaaaacttgcccagc 26411  T
Q  157 cctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaa 221  Q
    |||| | ||||||||  ||||||||||||| |||||||| ||| |||||||||||||||| ||||    
T  26410 cctctccatacatgtctaggcactcaaaaccatccaacacacgtcctaaaacaacattttgaaaa 26346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 32035 - 31801
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||| |||||| |||| |||||||||||||  ||||||| | |||| ||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  32035 tggcgaactcaagaaaataggctactcgctatgacgagtaagttgttcgccgtggcgagcagaaaaatggtgctctcgggagttttgacatttttctcac 31936  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactca--aaacgatccaacatac 198  Q
    |||||| ||||||||||| |||| |||    ||||| |||||| || | ||||||||||| | | | |  | ||||||||||  |||| ||||||| |||    
T  31935 taaatcttcatttttaagttccctaatcatatttttaatctaaaaattggcccagtcctctccaaaaacatccaggcactcaacaaaccatccaacttac 31836  T
Q  199 gacctaaaacaacattttaaaaatcaaggtttctc 233  Q
    | | || ||||||||||||||||||| | ||||||    
T  31835 gtcttataacaacattttaaaaatcatgatttctc 31801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 182646 - 182487
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||||| | |||||||||||||| |||||||| | ||||   ||||| ||||| ||  || |||||||||||||||||||||||||||| |    
T  182646 tggcgagctcaaggagaagggctactcgctatggcgagtaagttgttcgttgtggcaagcaggaagatggtgctctcgggagttttgacatttttctcac 182547  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctc 160  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| || | |||||||||||    
T  182546 taaatcttcatttttaagctccctaatcccctttttgatctaaaaattagcccagtcctc 182487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 13608 - 13471
Alignment:
Q  2 ggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccct 101  Q
    ||||| |||||| |||| ||||||||||||| |||||||| | |||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||    
T  13608 ggcgaactcaagaaaataggctactcgctatggcgagtaagttgttcacctaggcgagcagaaaaatggtgctctcgggagttttgacatttttctcact 13509  T
Q  102 aaatcctcatttttaagctccccaattccctttttgat 139  Q
    ||||| |||||||||||||||| ||| | |||||||||    
T  13508 aaatcttcatttttaagctccctaatcctctttttgat 13471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 189201 - 189421
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||||||  || ||| ||||||||| |||| |||||||| | |||| ||| ||||||||||||| || ||||||| ||||||||||| ||||||||      
T  189201 tggcgagcttcagaaaaagggctactcactatggcgagtaagttgttcgccgcggcgagcagaaaaatggtgctctcaggagttttgacttttttctcag 189300  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||| |||||||||| ||||| |||  |||||||||||||| ||||||| |||||||| ||| | |  | |||||||||||||| |||||||  | |     
T  189301 taaatcttcatttttaatctccctaatctcctttttgatctaaaaacttgcacagtcctctctaaatacatccaggcactcaaaaccatccaactcatgt 189400  T
Q  201 cctaaaacaacattttaaaaa 221  Q
    |||| ||||||||||| ||||    
T  189401 cctataacaacattttgaaaa 189421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 2443 - 2221
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    ||||||||||||| ||| |||||||||||||| |||||    | |||| | ||||||||||| ||| || |||||||||||||||||||||||||||| |    
T  2443 tggcgagctcaagaaaa-gggctactcgctatggcgagatcgttgttcgctgtggcgagcaggaaaatggtgctctcgggagttttgacatttttctcac 2345  T
Q  101 taaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacga 200  Q
    |||||| ||||||||||| |||| ||    | |||| |||||| || | ||||||||||| ||| | |  | ||||||||| |||| ||||||| ||||     
T  2344 taaatcttcatttttaagttccctaaacatcattttaatctaaaaattggcccagtcctctctaaaaacatccaggcactctaaaccatccaacttacgt 2245  T
Q  201 cctaaaacaacattttaaaaatca 224  Q
    | || |||||||||||||||||||    
T  2244 cttataacaacattttaaaaatca 2221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 159638 - 159746
Alignment:
Q  1 tggcgagctcaaggaaatgggctactcgctatagcgagtaattcgttcaccgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccc 100  Q
    |||||| |||||| ||| |||  ||||||||| |||||||| | |||| |||||||||| ||||||| |||||||||| ||||||||||||||||||| |    
T  159638 tggcgaactcaagaaaaggggtaactcgctatggcgagtaagttgttcgccgtggcgagtagaaaatagctgctctcgagagttttgacatttttctcac 159737  T
Q  101 taaatcctc 109  Q
    |||||||||    
T  159738 taaatcctc 159746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 3045 - 3219
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||||| || |     
T  3045 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctaaaaattg 3144  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
     || ||||||| ||| | |    |||||||||||||| || |||| |||  | || |||||||||||||||||||    
T  3145 tccaagtcctctctaaaaacacccaggcactcaaaaccattcaacttacatcttataacaacattttaaaaatca 3219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 35008 - 35182
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaactt 149  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||| | || |     
T  35008 cgtggcgagcaagaaaaatggtgctgtcgggagttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattg 35107  T
Q  150 gcccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
     |||||||||| ||| | |  | |||||||||||||| ||||||| |||| | || ||||||| ||| |||||||    
T  35108 tcccagtcctctctaaaaacatccaggcactcaaaactatccaacttacgtcttataacaacaatttgaaaatca 35182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 29758 - 29930
Alignment:
Q  53 tggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgc 151  Q
    ||||||||| ||||| || |||||||||  ||||||||||||||||| ||||||| |||||||||||||||| |||   |||||| |||| | || |  |    
T  29758 tggcgagcaagaaaaatggtgctctcggacgttttgacatttttctcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattgtc 29857  T
Q  152 ccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
     |||||||| ||| | |  ||||| |||||||||| ||||||| |||| | || ||||||| ||| |||||||    
T  29858 acagtcctctctaaaaacattcagacactcaaaactatccaacttacgtcttataacaacaatttgaaaatca 29930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 449337 - 449214
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | ||     
T  449337 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaata 449238  T
Q  171 ttcaggcactcaaaacgatccaac 194  Q
    |||||||||||||||| |||||||    
T  449237 ttcaggcactcaaaactatccaac 449214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 96358 - 96408
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  96358 ctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 96408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 179463 - 179506
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttt 114  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||    
T  179463 tgctctcgggagttttgtcatttttctcactaaatcttcatttt 179506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 50 - 203
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  50 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 149  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    | |||||||||||||| ||||||| |||  | || ||||||| ||| |||||||    
T  150 tccaggcactcaaaactatccaacttacatcttataacaacaatttgaaaatca 203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 989 - 1142
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | |      
T  989 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaaca 1088  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    | |||||||||||||| | ||||| |||  | || ||||||| |||||||||||    
T  1089 tccaggcactcaaaactaaccaacttacatcttataacaacaatttaaaaatca 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 7128 - 6955
Alignment:
Q  51 cgtggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttg 150  Q
    |||||||||||  |||  | |||||||||||||||||||||||||||| ||||||| |||||||||||||||  |||   |||||| |||||| || |      
T  7128 cgtggcgagcaagaaaaaggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccgtaatcatctttttaatctaaaaattgt 7029  T
Q  151 cccagtcctccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    |||||||||| ||| | |  | |||| ||||||||| ||||||| |||  | || ||||||||| |||||||||    
T  7028 cccagtcctctctaaaaacatccaggtactcaaaactatccaacttacaccttataacaacattctaaaaatca 6955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 8)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 21352 - 21279
Alignment:
Q  51 cgtggcgagca-gaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21352 cgtggcgagcaagaaaaatggtgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 21279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 56444 - 56392
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  56444 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 56392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 147453 - 147505
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  147453 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 147505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 154640 - 154692
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  154640 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 154692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 252393 - 252445
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  252393 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 252445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 258999 - 259051
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  258999 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 259051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 187503 - 187452
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  187503 gctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 187452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 197130 - 197079
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  197130 gctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 197079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 12935 - 12987
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12935 tgctctcgggagttttgacatttttctcactaaatcctcatttttaagctccc 12987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 259171 - 259230
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  259171 ggcgaacagaaaaatgctgctctcgggagttttgacatttttctcactaaatcctcattt 259230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 265586 - 265645
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  265586 ggcgaacagaaaaatgctgctctcgggagttttgacatttttctcactaaatcctcattt 265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 17843 - 17791
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||| | ||||||||||||||||    
T  17843 tgctcttgggagttttgacatttttctcactaaaacttcatttttaagctccc 17791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 541 - 479
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  541 agaaaatgggtgctctcgggagttttgacatttttcccactaaatcctcatttttaagctccc 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 3266 - 3328
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  3266 agaaaaatgatgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 3328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 8750 - 8804
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcccca 125  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  8750 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcccca 8804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 18834 - 18888
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcccca 125  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  18834 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcccca 18888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 124606 - 124544
Alignment:
Q  61 agaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  124606 agaaaaatgttgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 124544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 35285 - 35339
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||| ||||||||||||| ||||||||||| ||||||| ||||||||||| ||||    
T  35285 gctgttctcgggagttttaacatttttctcactaaatcttcatttttaagttccc 35339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  520 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 913 - 965
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  913 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 3732 - 3680
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  3732 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 3680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19005 - 19057
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19005 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 19057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 3718 - 3770
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  3718 tgctctcgggagttttgacatttgtctcactaaatcctcatttttaagctccc 3770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 13083 - 13036
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  13083 tgctctcggaagttttgacatttttctcactaaaacctcatttttaag 13036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14110 - 14162
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  14110 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 14162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 300 - 352
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||  |||||||||| |||||    
T  300 tgctcttgggagttttgacatttttctcactaaattttcatttttaacctccc 352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 26387 - 26439
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26387 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 26439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 2590 - 2538
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  2590 tgctctcgggagttgtgacattttcctcactaaatcttcatttttaagctccc 2538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 46013 - 46065
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  46013 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 46065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 22414 - 22362
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22414 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 22362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 26611 - 26559
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26611 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 26559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 61685 - 61633
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  61685 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 61633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 60121 - 60070
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  60121 tgctctcgggagttttgacatttttctcaccaaatcttcatttttaagctcc 60070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 3452 - 3400
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3452 tgctctcgggagttttgacatttttatcactaaatcctcatttttaagctccc 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 1041 - 1093
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  1041 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctccc 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 10952 - 11003
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  10952 tgctctcgggagttttgaca-ttttctcactaaatcttcatttttaagttccc 11003  T

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Target: scaffold0434 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 1019 - 968
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  1019 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctcc 968  T

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Target: scaffold0156 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 26096 - 26147
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  26096 tgctctcgggagttttgacatttttctcactaaatcatcatttttaagctcc 26147  T

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Target: scaffold0021 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 141823 - 141882
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcattt 113  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  141823 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcctcattt 141882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 2637 - 2691
Alignment:
Q  69 gctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  2637 gctgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 2691  T

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Target: scaffold0326 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 5058 - 5008
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  5058 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctc 5008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 2424 - 2581
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||| | |   |||||| |||| | |||||| ||||||||| ||| | |      
T  2424 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccctattcatctttttaatctga-aacttgtccagtcctctctaaaaaca 2522  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatcaaggtt 229  Q
    | |||||||| ||||| ||||||| ||   | || ||||||| ||| ||||||||||||    
T  2523 tccaggcactaaaaactatccaacttataccttataacaacaatttgaaaatcaaggtt 2581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 23503 - 23555
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||||||||||||    
T  23503 tgctctcgggagttttgatatttttctcactaaaacttcatttttaagctccc 23555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 55612 - 55562
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  55612 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctc 55562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 72568 - 72518
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  72568 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagctc 72518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 80835 - 80713
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||| | |   |||||| |||| | || |  |||||||||| ||| | |      
T  80835 tgctctcgggagttttgacatttttctcactaaagcttcatttttaagctccctattcatctttttaatctgaaaattgtcccagtcctctctaaaaaca 80736  T
Q  171 ttcaggcactcaaaacgatccaa 193  Q
    |||||||||||||||||| ||||    
T  80735 ttcaggcactcaaaacgaaccaa 80713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 98142 - 98090
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  98142 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccc 98090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 161180 - 161128
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||| |||||||||||||||| || || ||||| || |||||||||    
T  161180 tgctctcgggatttttgacatttttctcactcaaacctcaattctaagctccc 161128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 71580 - 71649
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  71580 ggcgaacagaaaaaggctgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 71649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 77228 - 77279
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    |||||||||||||||||||||||||||| ||||||| ||||||  |||||||    
T  77228 tgctctcgggagttttgacatttttctcactaaatcttcatttcgaagctcc 77279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 423 - 371
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  423 tgctctcgggagttttgacatttttctcactaaatcttcagttttaagctccc 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 4978 - 5030
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  4978 tgctcttgggagttttgacatttttctccctaaaacatcatttttaagctccc 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 3017 - 2965
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  3017 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 8164 - 8000
Alignment:
Q  61 agaaaattgctgctctcgggagttttga-catttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcct 159  Q
    |||||| || |||||||||||||||||| | ||||| || ||||||| |||||||||||||||| |||   |||||| |||| | || |  |||||||||    
T  8164 agaaaaatggtgctctcgggagttttgaccttttttttcactaaatcttcatttttaagctccctaatcatctttttaatctgaaaattgtcccagtcct 8065  T
Q  160 ccctatacatgttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatca 224  Q
    | ||| | |  ||||| |||||||||| ||||||| |||| | || ||||||| ||| |||||||    
T  8064 ctctaaaaacattcagacactcaaaactatccaacttacgtcttataacaacaatttgaaaatca 8000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 8898 - 8846
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  8898 tgctctcgggagttttgacatttttctcactaaaacttcatttttaagctccc 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 2982 - 2930
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  2982 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 2930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11684 - 11632
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| | ||||| ||||||||||| ||||    
T  11684 tgctctcaggagttttgacatttttctcacgaaatcttcatttttaagttccc 11632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 5770 - 5822
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  5770 tgctctcggaagttttgacatttttctcactaaatcttcatttttaagctccc 5822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 9176 - 9328
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||| |||| | |   |||||| |||||| || |  |||||||||| | | | |      
T  9176 tgctatcgggagttttgacatttttctcactaaatcttcatttttaagttccctattcatctttttaatctaaaaattgtcccagtcctctccaaaaaca 9275  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatc 223  Q
    | |||||||||||||| ||||||| |||  | || ||||||| ||||||||||    
T  9276 tccaggcactcaaaactatccaacttacaccttataacaacaatttaaaaatc 9328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 27748 - 27800
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  27748 tgctctcgggagttttgatatttttctcactaaatcttcatttttaagctccc 27800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 26805 - 26857
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  26805 tgctctcgggagttttgatatttttctcactaaatcttcatttttaagctccc 26857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 21351 - 21503
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||||||||  | |   |||||| |||||| || |   ||||||||| ||| |        
T  21351 tgctctcgggaattttgacatttttctcactaaatcttcatttttaagctccatattcatctttttaatctaaaaattgttccagtcctctctaaaatca 21450  T
Q  171 ttcaggcactcaaaacgatccaacatacgacctaaaacaacattttaaaaatc 223  Q
    |||||||||||||||| ||||||| |||  | || ||||||| ||||||||||    
T  21451 ttcaggcactcaaaactatccaacttacaccttataacaacaatttaaaaatc 21503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 32018 - 32070
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  32018 tgctctcgggagttttgacatttttctcactaaatcttcattttcaagctccc 32070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 7099 - 7145
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaa 117  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  7099 tgctctcgggagttttgacatttatctcactaaatcttcatttttaa 7145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 19807 - 19755
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19807 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 19755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 1851 - 1903
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  1851 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 1903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 7427 - 7479
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  7427 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 7479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 9738 - 9790
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  9738 tgctctcaggagttttgacatttttctcactaaatcttcatttttaagctccc 9790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 45409 - 45461
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||    
T  45409 tgctctcggaagttttgacatttttctcactaaatcttcatttttaagttccc 45461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 9751 - 9803
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  9751 tgctctcaggagttttgacatttttctcactaaatcttcatttttaagctccc 9803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 47529 - 47477
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  47529 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 47477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 42438 - 42490
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  42438 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 42490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 30317 - 30369
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  30317 tgctcttgggagttttgacatttttctcactaaatcttcatttttaagctccc 30369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 38911 - 38963
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||| ||||    
T  38911 tgctcttgggagttttgacatttttctcactaattcttcatttttaagttccc 38963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 44982 - 45034
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||| ||||||||||| |||| || ||||||||||| ||||    
T  44982 tgctctcgggagttttaacatttttctcactaattcttcatttttaagttccc 45034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 3382 - 3434
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  3382 tgctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 3434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 92267 - 92215
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  92267 tgctctcgggagttttgacatttttctcactaaatctttatttttaagctccc 92215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 2633 - 2581
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  2633 tgctctcgggagttttgacatttttctcactaaatcttcattttaaagctccc 2581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 207400 - 207348
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  207400 tgctctcgggaggtttgacatttttctcactaaatcttcatttttaagctccc 207348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 2749 - 2872
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatg 170  Q
    |||||||||||||||||||||||||| | ||||| |   |||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | ||     
T  2749 tgctctcgggagttttgacatttttcacactaaaactatatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaata 2848  T
Q  171 ttcaggcactcaaaacgatccaac 194  Q
    |||||||||||||||| |||||||    
T  2849 ttcaggcactcaaaactatccaac 2872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 153020 - 152973
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  153020 tgctctcgggagttttgacatttttctcactaaaacctcatttttaag 152973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 20177 - 20125
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  20177 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 20125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 935 - 885
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  935 ctctcgggagttttgacatttttctcactaaatcttcatttttaagttccc 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 334 - 384
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  334 tgctctcgggagttttgacatttttctcactaaatcttcacttttaagctc 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 3699 - 3752
Alignment:
Q  70 ctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||    
T  3699 ctgctctcgggagttttgtcatttttctcactaaatcctcattttcaagttccc 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 7738 - 7791
Alignment:
Q  70 ctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||    
T  7738 ctgctctcgggagttttgtcatttttctcactaaatcctcattttcaagttccc 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 16565 - 16496
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||    
T  16565 ggcgaacagaaaaaggctgctcttgggagttttgacatttctctcactaaatcttcatttttaagttccc 16496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 44683 - 44752
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  44683 ggcgaacagaaaaaggctactctcgggagctttgacatttttctcactaaatcttcatttttaagttccc 44752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 143174 - 143223
Alignment:
Q  74 tctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  143174 tctcgggagttttgacatttttctcactaaatcttcaattttaagctccc 143223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 62883 - 62831
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  62883 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 62831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 171480 - 171435
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcattttta 116  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||    
T  171480 tgctctcgggagttttgacatttttctcactaaatcttcattttta 171435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 1894 - 1938
Alignment:
Q  79 ggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  1894 ggagttttgacatttttctcactaaatcttcatttttaagctccc 1938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 6658 - 6710
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  6658 tgctctcgggagttttgacatttttctcactaaaacttcagttttaagctccc 6710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 8956 - 9008
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  8956 tgctctcggaagttttgacatttttctcactaaaacttcatttttaagctccc 9008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 8941 - 8893
Alignment:
Q  75 ctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  8941 ctcgggagttttgacattttcctcactaaatcttcatttttaagctccc 8893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 12002 - 11950
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  12002 tgctctcgggagttttgacatttttctcactaaatcttcaattttaggctccc 11950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14158 - 14106
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  14158 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagctccc 14106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 25942 - 25994
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  25942 tgctcttgggagttttgacatttttctcactaaatcttcatttctaagctccc 25994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 4730 - 4678
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  4730 tgctctcgagagttttgacatttttctcactaaatcttcatttttaagttccc 4678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 46428 - 46376
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  46428 tgctcttgggagttttgacatttttctcactaaatcttcatttttaagttccc 46376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 50701 - 50649
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  50701 tgctcttgggagttttgacatttttctcactaaatcttcatttttaagttccc 50649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 28350 - 28402
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  28350 tgctctcgggagttttgacatttttctcagtaaaacctcatttttaagttccc 28402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 17105 - 17053
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||  ||||||||||||||||||| ||||||| ||||||||||||||||    
T  17105 tgctctcaagagttttgacatttttctcactaaatcttcatttttaagctccc 17053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20680 - 20732
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  20680 tgctctcgggagttttgacatttttctcactaaatcttcaattctaagctccc 20732  T

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Target: scaffold0072 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 56371 - 56423
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||    
T  56371 tgctctcgggagttttgacttttttctcactaaatcttcatttttaagttccc 56423  T

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Target: scaffold0071 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 50631 - 50579
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  50631 tgctctcgggagttttgacatttttctcactaaatcatcaattataagctccc 50579  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 38336 - 38284
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  38336 tgctctcgggagttttgacattcttctcactaaatcttcatttttaagttccc 38284  T

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Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 136396 - 136344
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  136396 tgctctcgggagttttgacattcttctcactaaatcttcatttttaagttccc 136344  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 43785 - 43738
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||    
T  43785 tgctctcgggagttttgacatttttctcactaaaacttcatttttaag 43738  T

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Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 48851 - 48804
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaag 118  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||    
T  48851 tgctctcgggagttttgacatttttctcactaaaacttcatttttaag 48804  T

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Target: scaffold0430 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 14250 - 14192
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatt 112  Q
    ||||| |||||||  ||||||||||| |||||||| ||||||||| |||||||||||||    
T  14250 ggcgaacagaaaaaggctgctctcggaagttttgatatttttctcactaaatcctcatt 14192  T

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Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 51386 - 51316
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagtttt-gacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||| |||||||||||| ||||||| ||| || |||||||||    
T  51386 ggcgaacagaaaaaggctgctctcgggagtttttgacatttttctcactaaatcttcaattctaagctccc 51316  T

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Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 1386 - 1273
Alignment:
Q  72 gctctcgggagttttgacatttttctccctaaatcctcatttttaagctccccaattccctttttgatctaacaacttgcccagtcctccctatacatgt 171  Q
    |||||||| |||||||| ||||||||| ||||||| | |||||||||||||| | |   |||||| |||||| || |  |||||||||| ||| | |  |    
T  1386 gctctcggaagttttgaaatttttctcactaaatcttaatttttaagctccctattcatctttttaatctaaaaattgtcccagtcctctctaaaaacat 1287  T
Q  172 tcaggcactcaaaa 185  Q
    ||||||||||||||    
T  1286 tcaggcactcaaaa 1273  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 9842 - 9891
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagct 120  Q
    |||||||||||||||| |||| |||||| ||||||| |||||||||||||    
T  9842 tgctctcgggagtttttacatctttctcactaaatcttcatttttaagct 9891  T

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Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 41327 - 41274
Alignment:
Q  71 tgctctcgggagttttgacattttt-ctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||    
T  41327 tgctctcgggagttttgactttttttctcactaaatcttcatttttaagctccc 41274  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 27452 - 27383
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||| ||||||||||||||||||||| ||||| | ||| || |||||||||    
T  27452 ggcgaacagaaaaaggctgctcttgggagttttgacatttttctcactaaaacttcaattctaagctccc 27383  T

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Target: scaffold1584 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 830 - 882
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||| | ||| || |||||||||    
T  830 tgctctcgggagttttgacatttttctcactaaaacttcaattctaagctccc 882  T

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Target: scaffold0574 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 5570 - 5518
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || ||| |||||    
T  5570 tgctctcgggagttttgacatttttctcactaaatcttcaattctaaactccc 5518  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15174 - 15122
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| ||||||| ||| || |||| ||||    
T  15174 tgctctcgggagttttgacatttttctcactaaatcatcaattctaagttccc 15122  T

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Target: scaffold0220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 10868 - 10920
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||| |||||||||| ||||||| ||| || |||||||||    
T  10868 tgctctcgggagttttggcatttttctcactaaatcatcaattctaagctccc 10920  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 42603 - 42551
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||  |||||   ||||||||||||||||    
T  42603 tgctctcgggagttttgacatttttcttactaaaatttcatttttaagctccc 42551  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 53298 - 53246
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||  |||||   ||||||||||||||||    
T  53298 tgctctcgggagttttgacatttttcttactaaaatttcatttttaagctccc 53246  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 370885 - 370937
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||  |||||||||||||||||| ||||||| ||||||||||| ||||    
T  370885 tgctctcgaaagttttgacatttttctcactaaatcttcatttttaagttccc 370937  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 24726 - 24777
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctcc 122  Q
    ||||||||||| |||||||||||||||| ||| ||||||| || ||||||||    
T  24726 tgctctcgggaattttgacatttttctcactagatcctcaattctaagctcc 24777  T

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Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 14525 - 14575
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctc 121  Q
    ||||||||||| |||||||||||||||| ||| ||||||| || |||||||    
T  14525 tgctctcgggaattttgacatttttctcactagatcctcaattctaagctc 14575  T

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Target: scaffold0402 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 15456 - 15494
Alignment:
Q  85 ttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  15456 ttgacatttttctcactaaatcttcatttttaagctccc 15494  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 101350 - 101300
Alignment:
Q  73 ctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||| || || ||||| || |||||||||    
T  101350 ctctcgggagttttgacatttttctcactcaaacctcaattctaagctccc 101300  T

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Target: scaffold0947 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 3828 - 3787
Alignment:
Q  82 gttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||    
T  3828 gttttgacatttttctcactaaatcttcatttttaagttccc 3787  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 7740 - 7809
Alignment:
Q  54 ggcgagcagaaaattgctgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    ||||| |||||||  |||||||||||||||||||| ||||| ||| |||||||  || || |||||||||    
T  7740 ggcgaacagaaaaaggctgctctcgggagttttgatattttcctcactaaatctacaattctaagctccc 7809  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 1438 - 1386
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||| |||||||||||  |||||||||| ||||| | ||||||||||||||||    
T  1438 tgctttcgggagttttatcatttttctcactaaaacttcatttttaagctccc 1386  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 6449 - 6397
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||  |||||||||||  |||| | ||||||||||||||||    
T  6449 tgctctcgggagtttaaacatttttctcattaaaacttcatttttaagctccc 6397  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14904 - 14956
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  14904 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 14956  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 41703 - 41755
Alignment:
Q  71 tgctctcgggagttttgacatttttctccctaaatcctcatttttaagctccc 123  Q
    |||||||||||||||||||||||||||| || || | ||| || |||||||||    
T  41703 tgctctcgggagttttgacatttttctcactcaaacttcaattctaagctccc 41755  T

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