View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12737_low_37 (Length: 244)
Name: NF12737_low_37
Description: NF12737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12737_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 11855900 - 11855670
Alignment:
| Q |
1 |
agacttctggcttttagaacggattgatcattattgttctgggtggctaaaacttcaagacgatcaatcatcgaaaaaaggaaagaaaaggagaacaata |
100 |
Q |
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| T |
11855900 |
agacttctggcttttagaacagattgatcattattgttctgggtggttaaaacttcaagacgatcaatcatcgaaaaaaggaaagaaaaggagaacaata |
11855801 |
T |
|
| Q |
101 |
acggttagctctattgtcttatcctttataacattataacattattatcacatctttggacacaagacctcaagcaaatgacagacaaaagttgc-gtgc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
11855800 |
acggttagctctattgtcttatcctttataacattataacattattatcacatctttggacacaagacctcaagcaaatgacagacaaaagttgcagtgc |
11855701 |
T |
|
| Q |
200 |
ttgggtctctaaacaaatccttttttgatgt |
230 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
11855700 |
ttgggtctctaaacaaatccttttttgatgt |
11855670 |
T |
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