View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12738_low_2 (Length: 640)

Name: NF12738_low_2
Description: NF12738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12738_low_2
NF12738_low_2
[»] chr5 (8 HSPs)
chr5 (19-633)||(3969983-3970597)
chr5 (110-214)||(42194533-42194637)
chr5 (111-186)||(42439647-42439722)
chr5 (117-169)||(10957447-10957499)
chr5 (113-183)||(9818717-9818786)
chr5 (116-186)||(12432983-12433053)
chr5 (111-168)||(7667590-7667647)
chr5 (126-186)||(38592208-38592268)
[»] chr4 (10 HSPs)
chr4 (112-183)||(11271570-11271641)
chr4 (111-216)||(22683844-22683949)
chr4 (113-192)||(43628100-43628179)
chr4 (111-184)||(33560602-33560675)
chr4 (111-183)||(32818403-32818474)
chr4 (111-187)||(8330096-8330172)
chr4 (111-215)||(18597020-18597124)
chr4 (111-163)||(25319028-25319080)
chr4 (111-232)||(35995209-35995329)
chr4 (126-186)||(53782596-53782656)
[»] chr8 (6 HSPs)
chr8 (115-232)||(2924761-2924878)
chr8 (111-183)||(39648372-39648444)
chr8 (60-182)||(37684336-37684456)
chr8 (111-186)||(7437649-7437724)
chr8 (111-229)||(11791720-11791838)
chr8 (113-166)||(1836262-1836315)
[»] chr6 (9 HSPs)
chr6 (66-185)||(26280542-26280659)
chr6 (68-186)||(5724660-5724776)
chr6 (115-254)||(34620871-34621009)
chr6 (115-254)||(34748308-34748446)
chr6 (111-162)||(35098228-35098278)
chr6 (111-169)||(6544545-6544603)
chr6 (115-212)||(20669684-20669781)
chr6 (111-243)||(4910889-4911020)
chr6 (130-182)||(25195580-25195632)
[»] chr7 (4 HSPs)
chr7 (66-186)||(18349710-18349830)
chr7 (111-166)||(40422773-40422828)
chr7 (111-163)||(17908164-17908216)
chr7 (126-254)||(38123628-38123755)
[»] chr2 (12 HSPs)
chr2 (110-186)||(42982522-42982599)
chr2 (121-244)||(42740968-42741089)
chr2 (111-186)||(2002725-2002799)
chr2 (111-185)||(28028822-28028896)
chr2 (112-186)||(37561688-37561762)
chr2 (130-188)||(44810374-44810432)
chr2 (111-188)||(3476457-3476534)
chr2 (113-186)||(30503192-30503264)
chr2 (128-197)||(37402252-37402321)
chr2 (126-214)||(32307080-32307167)
chr2 (59-91)||(42740907-42740939)
chr2 (126-254)||(44439249-44439377)
[»] chr3 (5 HSPs)
chr3 (111-162)||(7717375-7717425)
chr3 (145-186)||(21513376-21513417)
chr3 (111-184)||(7298348-7298421)
chr3 (115-188)||(48089416-48089489)
chr3 (114-186)||(32523370-32523442)
[»] chr1 (5 HSPs)
chr1 (111-192)||(35592477-35592557)
chr1 (111-212)||(18325393-18325494)
chr1 (121-186)||(39289293-39289358)
chr1 (142-186)||(11049261-11049305)
chr1 (130-186)||(33693020-33693076)
[»] scaffold0024 (1 HSPs)
scaffold0024 (111-184)||(23625-23697)


Alignment Details
Target: chr5 (Bit Score: 575; Significance: 0; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 19 - 633
Target Start/End: Complemental strand, 3970597 - 3969983
Alignment:
Q  19 atattgtcatgtgtgtagtgttggtgtatgtttggtctcgcttttggaggtgtagaattgatttcgacatgtttggaaatgttttctagtacattgattt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  3970597 atattgtcatgtgtgtagtgttggtgtatgtttggtctcgcttttggaggtgtagaattgatttcgacatgtttggaatttttttctagtaaattgattt 3970498  T
Q  119 tgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcacttttacaga 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3970497 tgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgttcaattcacttttacaga 3970398  T
Q  219 tatgtatcctaacacgaatcactttatattcaactcttgtttgactaaaatcattttacaaaaccagttcatttgaaataaatttttgtcacaaaccaat 318  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3970397 tatgtatcctaacacgaatcactttatattcaactcatgtgtgactaaaatcattttacaaaaccagttcatttgaaataaatttttgtcacaaaccaat 3970298  T
Q  319 catacacttagtattatcaatgttcagaagctttgagcttatggatgtgatagtgtgcaggggattcttcttatcttctacccggggcaacagttgctac 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3970297 catacacttagtattatcaatgttcagaagctttgagcttatggatgtgagaatgtgcaggggattcttcttatcttctacccggggcaacagttgctac 3970198  T
Q  419 catacttatgcttggtgctctacatgccagacgaatgtatgatgacaagaaggtgtgcttttgattactcatcttgtataatgcctttagggtagcctgt 518  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3970197 catacttatgcttggtgctctacatgccagacgaatgtatgacgacaagaaggtgtgcttttgattactcatcttgtataatgcctttagggtagcctgt 3970098  T
Q  519 tatattggtgttcttcatttttatgcttaaacaagcatcacatgctactcgaggtttattttatgtgttagtttatcaatttgtagtgttgtagagtgcg 618  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3970097 tatattggtgttcttcatttttctgcttaaacaagcatcacatgctactcgaggtttattttatgtgttagtttatcaatttgtagtgttgtagagtgcg 3969998  T
Q  619 atttcatcttctgtg 633  Q
    |||||||||||||||    
T  3969997 atttcatcttctgtg 3969983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 42194637 - 42194533
Alignment:
Q  110 cattgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcac 209  Q
    |||| |||| ||||||||| |||||||||| |||||||||||  ||||||||||||| || |||  || |||||||| | ||| ||| || |||||||||    
T  42194637 cattaatttagcctccagagttgattctaacctgaagctaggttttgtagcttttgagtctaaatgtggtttttacactgaaatttattgttcaattcac 42194538  T
Q  210 tttta 214  Q
    |||||    
T  42194537 tttta 42194533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 42439722 - 42439647
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||| |||||||||||||||||||  ||||||||| |  |||||||||||| || |||| |||||||||||    
T  42439722 attgatttttcctccagaattgattctaacttgaagctagaatctgtagcttttgagtctaaacgtgatttttaca 42439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 10957447 - 10957499
Alignment:
Q  117 tttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactc 169  Q
    ||||| || |||||||||||||| |||||||||| ||||||||| ||||||||    
T  10957447 tttgcttctagaattgattctaacctgaagctagaaattgtagcctttgactc 10957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 9818717 - 9818786
Alignment:
Q  113 tgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttt 183  Q
    |||||||||||||| ||||||||||| | |||||||| || ||||||||||||| || | | |||||||||    
T  9818717 tgattttgcctccataattgattctact-tgaagctatgatttgtagcttttgattctagaattgattttt 9818786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 12433053 - 12432983
Alignment:
Q  116 ttttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||| ||||| ||||||||  ||||||||||| ||||| || ||||||| |||| |||||| ||||    
T  12433053 ttttgcctctagaatggattctaacttgaagctaggatttgtatctgttgactcaaaacgtgatttctaca 12432983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 7667590 - 7667647
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgact 168  Q
    ||||| ||||||| |||||||||||||||  ||||||||| | ||| |||||||||||    
T  7667590 attgactttgccttcagaattgattctaacttgaagctagaatttggagcttttgact 7667647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 38592208 - 38592268
Alignment:
Q  126 agaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||||||| |||||| || | ||||||||||||| || |||  |||||||||||    
T  38592208 agaattgattctaatttgaagccagaatttgtagcttttgagtctaaatgtgatttttaca 38592268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 11271641 - 11271570
Alignment:
Q  112 ttgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttt 183  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| || |||| ||| ||||    
T  11271641 ttgattttgcctccagaattgattctaacttgaagctaggatttgtagcttttgagtctaaacatgactttt 11271570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 22683844 - 22683949
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcact 210  Q
    ||||||||||||||||||||| ||| |||  |||||||| ||  |||||||||||| || |||| ||||||||||||| ||| ||| || |||| || ||    
T  22683844 attgattttgcctccagaattaattataacttgaagctatgatctgtagcttttgagtctaaacgtgatttttacattgaaatttattgttcaactcgct 22683943  T
Q  211 tttaca 216  Q
    ||||||    
T  22683944 tttaca 22683949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 43628100 - 43628179
Alignment:
Q  113 tgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaa 192  Q
    ||||||||| |||| | ||||||||||  |||||||| || |||||| |||||||||||||| ||||||| |||||||||    
T  43628100 tgattttgcttccatagttgattctaagttgaagctaagatttgtagattttgactccaaacatgattttaacatttaaa 43628179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 33560675 - 33560602
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttta 184  Q
    |||||||||||||| |||||||||||||| |  ||||||||| ||||||||||||| || |||  |||||||||    
T  33560675 attgattttgcctctagaattgattctaaccgaaagctaggatttgtagcttttgagtctaaaagtgattttta 33560602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 32818474 - 32818403
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttt 183  Q
    ||||||||||||||||||||||||||| || ||||||||| | ||||||||||||| || | | |||||||||    
T  32818474 attgattttgcctccagaattgattct-atttgaagctagaatttgtagcttttgattctagaattgattttt 32818403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 8330096 - 8330172
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacat 187  Q
    ||||||| |||||||| ||| ||||||||  ||||||||| ||||| ||||||||| || | | |||||||||||||    
T  8330096 attgattctgcctccataatggattctaacttgaagctagaaattggagcttttgattctataattgatttttacat 8330172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 18597020 - 18597124
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcact 210  Q
    ||||||||| |||||||||||||||||||  ||||||||  | ||| | ||||||| || | | |||||||| ||||| ||| ||| || | ||||||||    
T  18597020 attgattttacctccagaattgattctaacttgaagctataatttgaaccttttgattctataattgattttaacattcaaagttattgttaaattcact 18597119  T
Q  211 tttac 215  Q
    |||||    
T  18597120 tttac 18597124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 25319028 - 25319080
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttt 163  Q
    |||||||||| ||||||||||||||||||  ||||| ||||| ||||||||||    
T  25319028 attgattttgtctccagaattgattctaacttgaaggtaggatttgtagcttt 25319080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 35995209 - 35995329
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcact 210  Q
    ||||||||| ||| ||||| |||||||||  ||||||| ||| | |||| ||| |||| ||||||| ||||| ||| | ||| ||| || |||| ||| |    
T  35995209 attgattttaccttcagaactgattctaacttgaagctcggattggtagttttagacttcaaacttaattttcacactcaaa-ttattgttcaactcatt 35995307  T
Q  211 tttacagatatgtatcctaaca 232  Q
    |||| |||||||||||| ||||    
T  35995308 tttatagatatgtatccaaaca 35995329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 53782596 - 53782656
Alignment:
Q  126 agaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||||||| |||||| |||| |||||| |||||| | ||||| | |||||||||    
T  53782596 agaattgattctaatttgaagccaggatttgtagattttgatttcaaacataatttttaca 53782656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 232
Target Start/End: Original strand, 2924761 - 2924878
Alignment:
Q  115 attttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcactttta 214  Q
    |||||| ||||| ||||||||||||  ||||| |||| ||||| | |||||||| ||||| ||||||||||| | |||  || || |||| |||||||||    
T  2924761 attttgactccataattgattctaacttgaagttagggattgtcgtttttgacttcaaacatgatttttacactcaaatatattgatcaactcactttta 2924860  T
Q  215 cagatatgtatcctaaca 232  Q
    || |||||||||| ||||    
T  2924861 catatatgtatccaaaca 2924878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 39648444 - 39648372
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttt 183  Q
    |||||||||  ||| |||| |||||||||  | ||||||||| |||||||||||||||||||||||| |||||    
T  39648444 attgattttctctctagaactgattctaactttaagctaggatttgtagcttttgactccaaacttggttttt 39648372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 37684336 - 37684456
Alignment:
Q  60 ttttggaggtgtagaattgatttcgacatgtttggaaatgttttctagtaca-ttgattttgcctccagaattgattctaatctgaagctaggaattgta 158  Q
    ||||||||||||| |||||||| ||| ||||||||   |||| |  |||| | ||||||||| ||||||||||||||||| | ||||| ||||| ||||     
T  37684336 ttttggaggtgtaaaattgattccgaaatgtttggt--tgttgtggagtagaattgattttgtctccagaattgattctact-tgaagttaggatttgtg 37684432  T
Q  159 gcttttgactccaaacttgatttt 182  Q
    |||||||| || ||| ||||||||    
T  37684433 gcttttgattctaaaattgatttt 37684456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 7437724 - 7437649
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    |||||||||| ||| ||||||||||||||| |||| ||| || || ||| ||||||||| |||| ||| |||||||    
T  7437724 attgattttgactctagaattgattctaatttgaaactatgatttatagtttttgactctaaacgtgagttttaca 7437649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 11791838 - 11791720
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcact 210  Q
    ||||| |||||||||| || ||||||||   | ||||||||| ||||||||||||| ||  ||| ||||||||||| | ||| |||||| |||  | |||    
T  11791838 attgaatttgcctccataactgattctaccttcaagctaggatttgtagcttttgagtctcaacgtgatttttacactaaaatttactgttcagcttact 11791739  T
Q  211 tttacagatatgtatccta 229  Q
    |||||  | ||||||||||    
T  11791738 tttacgtaaatgtatccta 11791720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 1836315 - 1836262
Alignment:
Q  113 tgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttga 166  Q
    |||||||||||| | ||||||||||||  |||||||||||  ||||||||||||    
T  1836315 tgattttgcctctaaaattgattctaacttgaagctaggatgtgtagcttttga 1836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 26280542 - 26280659
Alignment:
Q  66 aggtgtagaattgatttcgacatgtttggaaatgttttctagtaca-ttgattttgcctccagaattgattctaatctgaagctaggaattgtagctttt 164  Q
    ||||||||||||||||| ||||||||||  | |||||| | ||| | ||||||||||||| ||||||||||| | | ||||||||| | |||||| ||||    
T  26280542 aggtgtagaattgattttgacatgtttg--attgttttttggtagaattgattttgcctcaagaattgattccact-tgaagctagaatttgtagttttt 26280638  T
Q  165 gactccaaacttgatttttac 185  Q
    || |||||| |||||||||||    
T  26280639 gattccaaaattgatttttac 26280659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 5724776 - 5724660
Alignment:
Q  68 gtgtagaattgatttcgacatgtttggaaatgttttctagtaca-ttgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttga 166  Q
    ||||||||||||||  ||||||||||||  || ||||  ||| | ||||||||||||||| ||||||||||| | ||||||||||| ||||| ||||| |    
T  5724776 gtgtagaattgattctgacatgtttgga--tgctttcaggtagaattgattttgcctccaaaattgattctact-tgaagctaggatttgtaacttttta 5724680  T
Q  167 ctccaaacttgatttttaca 186  Q
     || | | ||||||||||||    
T  5724679 ttctataattgatttttaca 5724660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 254
Target Start/End: Original strand, 34620871 - 34621009
Alignment:
Q  115 attttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcactttta 214  Q
    ||||||||||| ||||||||||||   ||||||||| |||  |||||| ||| || | | |||||||||||| | ||| ||| |  |||| |||||||||    
T  34620871 attttgcctccggaattgattctaca-tgaagctagaaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcactttta 34620969  T
Q  215 cagatatgtatcctaacacgaatcactttatattcaactc 254  Q
    || | |||||||| ||||  ||||||||||  ||||||||    
T  34620970 cataaatgtatccaaacataaatcactttaccttcaactc 34621009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 254
Target Start/End: Original strand, 34748308 - 34748446
Alignment:
Q  115 attttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcactttta 214  Q
    ||||||||||| ||||||||||||   ||||||||| |||  |||||| ||| || | | |||||||||||| | ||| ||| |  |||| |||||||||    
T  34748308 attttgcctccggaattgattctaca-tgaagctagaaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcactttta 34748406  T
Q  215 cagatatgtatcctaacacgaatcactttatattcaactc 254  Q
    || | |||||||| ||||  ||||||||||  ||||||||    
T  34748407 cataaatgtatccaaacataaatcactttaccttcaactc 34748446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 35098278 - 35098228
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagctt 162  Q
    ||||||||||||| || ||||||||||||| ||||||||| |||||||||||    
T  35098278 attgattttgcctacaaaattgattctaat-tgaagctagaaattgtagctt 35098228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 6544603 - 6544545
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactc 169  Q
    ||||||||||||| |||||||||||||||  ||||||||| | | | ||||||||||||    
T  6544603 attgattttgccttcagaattgattctaacttgaagctagaactcggagcttttgactc 6544545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Complemental strand, 20669781 - 20669684
Alignment:
Q  115 attttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcacttt 212  Q
    |||||||||| | ||||| || |||  ||||| || ||||||||| ||||| |||||||  ||||||||||||| ||| |||| | |||| |||||||    
T  20669781 attttgcctcaaaaattgtttttaacgtgaagttaagaattgtagtttttgcctccaaatgtgatttttacattcaaatttacggttcaactcacttt 20669684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 4910889 - 4911020
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcact 210  Q
    ||||||| |||||| | ||||||||||| | |||||||| || ||||||||||||| || | | |||||||| ||||  ||| |||  | || | |||||    
T  4910889 attgattctgcctcaaaaattgattctact-tgaagctatgatttgtagcttttgattctagaattgattttcacatacaaatttatagttcgactcact 4910987  T
Q  211 tttacagatatgtatcctaacacgaatcacttt 243  Q
    |||||| | |||||||| ||||  |||||||||    
T  4910988 tttacataaatgtatccaaacataaatcacttt 4911020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 25195580 - 25195632
Alignment:
Q  130 ttgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttt 182  Q
    ||||||||||  |||| ||||||  |||||||||||||||||||| |||||||    
T  25195580 ttgattctaacttgaaactaggatctgtagcttttgactccaaacgtgatttt 25195632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 18349710 - 18349830
Alignment:
Q  66 aggtgtagaattgatttcgacatgtttggaaatgttttctagtacatt--gattttgcctccagaattgattctaatctgaagctaggaattgtagcttt 163  Q
    ||||||| ||||||||| || |||||||||  |||||| ||||| | |  ||||||| ||||| |||||||| |||| ||||| ||||  ||||||||||    
T  18349710 aggtgtaaaattgattttgatatgtttgga--tgttttttagtataataggattttgactccataattgattttaatttgaagttagggtttgtagcttt 18349807  T
Q  164 tgactccaaacttgatttttaca 186  Q
    ||||| ||||| |||||||||||    
T  18349808 tgacttcaaacgtgatttttaca 18349830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 40422773 - 40422828
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttga 166  Q
    |||||||||||||| ||||||||||||||  ||||| ||||| |||| ||||||||    
T  40422773 attgattttgcctcaagaattgattctaacttgaagttaggatttgtggcttttga 40422828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 17908164 - 17908216
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttt 163  Q
    |||||||||| ||| ||||||||||||||  ||||||||||| |||| |||||    
T  17908164 attgattttgtctctagaattgattctaacatgaagctaggatttgtggcttt 17908216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 38123755 - 38123628
Alignment:
Q  126 agaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcacttttacagatatgtat 225  Q
    ||||||||||||| | ||||||||| ||||||||||| | | || | | |||||||||||| | ||| ||| || |||| |||||||||||   |||| |    
T  38123755 agaattgattctact-tgaagctagaaattgtagcttctaattctagaattgatttttacactcaaatttattggtcaactcacttttacatgaatgtgt 38123657  T
Q  226 cctaacacgaatcactttatattcaactc 254  Q
    || ||||| ||| ||||||  ||||||||    
T  38123656 ccgaacacaaattactttaccttcaactc 38123628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 42982522 - 42982599
Alignment:
Q  110 cattgattttgcctccagaatt--gattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||||||||||||||  ||||||| | ||||||||| ||||||||||||||| |||| | ||||||||||||    
T  42982522 cattgattttgcctccagaattttgattctact-tgaagctagaaattgtagcttttgattccagaattgatttttaca 42982599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 42740968 - 42741089
Alignment:
Q  121 cctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcacttttacagata 220  Q
    |||||| ||||||||||| | |||||||| || ||||||||||||| || | | |||||||||||| | ||| ||||||  ||| ||||||||||| | |    
T  42740968 cctccataattgattctact-tgaagctaagatttgtagcttttgattctagaattgatttttacactcaaatttactgtccaactcacttttacata-a 42741065  T
Q  221 tgtatcctaacacgaatcacttta 244  Q
    ||||| | ||||| ||||||||||    
T  42741066 tgtattcaaacacaaatcacttta 42741089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 2002799 - 2002725
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||||||||||  |||||||| | ||||||||||| |||||| |||| | || ||| ||||||||||||    
T  2002799 attgattttgcctccagacctgattctact-tgaagctaggatttgtagtttttcattctaaaattgatttttaca 2002725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 28028822 - 28028896
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttac 185  Q
    |||||||| | |||||||||||| | |||  ||||||||| | ||||||||||||||| ||||  ||||||||||    
T  28028822 attgatttggactccagaattgactataacttgaagctagaatttgtagcttttgactacaaatgtgatttttac 28028896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 37561688 - 37561762
Alignment:
Q  112 ttgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||||| | ||||||||||||  |||| ||| || ||||| ||||||||| ||||  |||||||||||    
T  37561688 ttgattttgcctctataattgattctaacttgaaactacgatttgtaccttttgacttcaaatgtgatttttaca 37561762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 44810374 - 44810432
Alignment:
Q  130 ttgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatt 188  Q
    ||||||||||  ||||||||||| ||||||||||||||  ||||| ||||||| |||||    
T  44810374 ttgattctaacttgaagctaggatttgtagcttttgacggcaaacatgattttaacatt 44810432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 3476534 - 3476457
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatt 188  Q
    |||||||||||||||||||||||||||||  | ||||||  ||||  ||||||||| || | | || |||||||||||    
T  3476534 attgattttgcctccagaattgattctaacttaaagctaaaaattagagcttttgattctagaatttatttttacatt 3476457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 30503192 - 30503264
Alignment:
Q  113 tgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    |||||||||||||| ||||||||||| | |||||| |||| | ||||||||||| || | | ||||||||||||    
T  30503192 tgattttgcctccaaaattgattctact-tgaagccaggattcgtagcttttgattcaagaattgatttttaca 30503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 37402321 - 37402252
Alignment:
Q  128 aattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattac 197  Q
    |||||| |||||  ||||||||| | ||||||||||||||| ||||| ||||| ||||| ||||| ||||    
T  37402321 aattgactctaacttgaagctagaatttgtagcttttgacttcaaacatgattgttacacttaaatttac 37402252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 32307080 - 32307167
Alignment:
Q  126 agaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcactttta 214  Q
    |||||| |||||||| |||||||| || ||||||  |||| |||||||| ||||||||||| ||| | ||| || |||| |||||||||    
T  32307080 agaattaattctaatttgaagctaagatttgtagtgtttg-ctccaaacatgatttttacacttatatttattgttcaactcactttta 32307167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 42740907 - 42740939
Alignment:
Q  59 cttttggaggtgtagaattgatttcgacatgtt 91  Q
    |||||||||||||||||||||||| ||||||||    
T  42740907 cttttggaggtgtagaattgattttgacatgtt 42740939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 44439249 - 44439377
Alignment:
Q  126 agaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcacttttacagatatgtat 225  Q
    ||||||||||||||  ||||||||  | ||| ||||||||| || ||| |||||||| ||| | ||| ||| || |||| ||||||||||| | |  |||    
T  44439249 agaattgattctaacttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgttcaactcacttttacataaacatat 44439348  T
Q  226 cctaacacgaatcactttatattcaactc 254  Q
    || ||||  |||||||||| ||| |||||    
T  44439349 ccaaacataaatcactttacatttaactc 44439377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 7717425 - 7717375
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagctt 162  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  7717425 attgattttgcctccagaattgattctact-tgaagctagaaattgtagctt 7717375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 21513417 - 21513376
Alignment:
Q  145 agctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  21513417 agctaggatttgtagcttttgactccaaacgtgatttttaca 21513376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 7298421 - 7298348
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttta 184  Q
    |||||| ||| ||||||||| ||||||||  ||||||||||| |||||| |||||| || || | |||||||||    
T  7298421 attgatgttgtctccagaatcgattctaacttgaagctaggatttgtagtttttgagtctaatcgtgattttta 7298348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 48089489 - 48089416
Alignment:
Q  115 attttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatt 188  Q
    |||||||||| ||||||||||| || || ||||||||| |||| | |||||| || |||| | |||||||||||    
T  48089489 attttgcctcaagaattgattcaaaccttaagctaggatttgtcgtttttgagtctaaacgtaatttttacatt 48089416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 32523442 - 32523370
Alignment:
Q  114 gattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||||| ||||  ||||| |  |||| ||||| ||||||||||||| || ||| ||||||||||||    
T  32523442 gattttgcctccataattatttctacttggaagttaggatttgtagcttttgattctaaaattgatttttaca 32523370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000009; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 35592477 - 35592557
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaa 192  Q
    |||||||||| ||| ||||||||||||||  | ||||||||| || ||||||||||||| |||| | ||||||||| |||||    
T  35592477 attgattttgactctagaattgattctaacttaaagctaggatttttagcttttgactctaaacat-atttttacacttaaa 35592557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 18325494 - 18325393
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttacatttaaaattactgctcaattcact 210  Q
    |||||||||||||||| | || | |||||  ||||||||||| |||  |||||||| || |||  ||||||||||||| ||| |||||| |||  |||||    
T  18325494 attgattttgcctccaaagttaactctaacttgaagctaggatttgatgcttttgagtctaaatgtgatttttacattaaaatttactgttcatctcact 18325395  T
Q  211 tt 212  Q
    ||    
T  18325394 tt 18325393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 39289358 - 39289293
Alignment:
Q  121 cctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    |||||| ||||||||||||  ||||||||| | || |||||||||| || |||| |||||||||||    
T  39289358 cctccaaaattgattctaacttgaagctagaacttttagcttttgagtcaaaacgtgatttttaca 39289293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11049261 - 11049305
Alignment:
Q  142 tgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||    
T  11049261 tgaagctaggatttgtagcttttgattctaaaattgatttttaca 11049305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 33693020 - 33693076
Alignment:
Q  130 ttgattctaatctgaagctaggaattgtagcttttgactccaaacttgatttttaca 186  Q
    ||||||||||  ||||||||| ||||||||||||||| || | | ||||||||||||    
T  33693020 ttgattctaacttgaagctagaaattgtagcttttgattctataattgatttttaca 33693076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 23697 - 23625
Alignment:
Q  111 attgattttgcctccagaattgattctaatctgaagctaggaattgtagcttttgactccaaacttgattttta 184  Q
    |||||||||| ||||| || | ||||||| |||||||||||| ||||||||||||| || | || |||||||||    
T  23697 attgattttgtctccataaataattctaa-ctgaagctaggatttgtagcttttgaatctagacgtgattttta 23625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University