View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1273_low_69 (Length: 217)

Name: NF1273_low_69
Description: NF1273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1273_low_69
NF1273_low_69
[»] chr2 (36 HSPs)
chr2 (1-136)||(2377193-2377328)
chr2 (1-125)||(9496017-9496146)
chr2 (46-119)||(19336945-19337018)
chr2 (1-119)||(12734857-12734980)
chr2 (54-119)||(12141701-12141766)
chr2 (48-125)||(45543127-45543203)
chr2 (1-108)||(18959079-18959191)
chr2 (7-125)||(33504374-33504498)
chr2 (8-119)||(38430041-38430157)
chr2 (55-125)||(9556430-9556500)
chr2 (1-119)||(2610745-2610868)
chr2 (1-123)||(8180933-8181060)
chr2 (1-119)||(25834835-25834958)
chr2 (54-125)||(33287572-33287643)
chr2 (54-125)||(37470193-37470264)
chr2 (46-125)||(42149712-42149791)
chr2 (49-119)||(39029738-39029808)
chr2 (1-94)||(43573132-43573230)
chr2 (1-125)||(12882047-12882176)
chr2 (56-125)||(26784402-26784471)
chr2 (1-125)||(31959672-31959801)
chr2 (2-119)||(45077884-45078008)
chr2 (55-108)||(45437010-45437063)
chr2 (1-124)||(8197543-8197671)
chr2 (1-124)||(8202303-8202431)
chr2 (54-110)||(32402666-32402722)
chr2 (58-125)||(21834705-21834772)
chr2 (46-125)||(23915745-23915824)
chr2 (49-132)||(23997747-23997829)
chr2 (60-119)||(26670925-26670984)
chr2 (54-108)||(6219133-6219187)
chr2 (1-82)||(9531602-9531688)
chr2 (54-116)||(37452286-37452348)
chr2 (62-119)||(11412865-11412921)
chr2 (56-125)||(19235046-19235115)
chr2 (1-33)||(17429298-17429330)
[»] chr3 (37 HSPs)
chr3 (1-125)||(45289093-45289222)
chr3 (1-125)||(49042087-49042217)
chr3 (1-132)||(53519725-53519860)
chr3 (54-125)||(49841767-49841838)
chr3 (46-119)||(36304123-36304196)
chr3 (1-125)||(48508386-48508515)
chr3 (1-125)||(54128530-54128659)
chr3 (54-125)||(39600741-39600812)
chr3 (54-116)||(29601052-29601114)
chr3 (1-124)||(15296059-15296187)
chr3 (46-106)||(40116390-40116450)
chr3 (58-125)||(19162652-19162718)
chr3 (7-125)||(19676089-19676212)
chr3 (46-125)||(40116520-40116599)
chr3 (54-125)||(50960697-50960768)
chr3 (54-132)||(19758032-19758109)
chr3 (1-94)||(40106622-40106720)
chr3 (1-114)||(52156086-52156204)
chr3 (55-103)||(38431021-38431069)
chr3 (54-122)||(39235292-39235360)
chr3 (60-104)||(44571599-44571643)
chr3 (55-119)||(50237695-50237759)
chr3 (58-125)||(30294185-30294252)
chr3 (1-87)||(45374479-45374570)
chr3 (82-125)||(46431767-46431810)
chr3 (54-101)||(55244453-55244500)
chr3 (54-132)||(19737129-19737206)
chr3 (78-124)||(26490467-26490513)
chr3 (49-119)||(35033303-35033373)
chr3 (54-108)||(37779045-37779099)
chr3 (1-125)||(45486851-45486983)
chr3 (54-107)||(11284157-11284210)
chr3 (46-119)||(29475843-29475916)
chr3 (1-93)||(38060897-38060994)
chr3 (54-95)||(39208789-39208830)
chr3 (49-125)||(42026591-42026667)
chr3 (46-126)||(52678902-52678982)
[»] chr7 (43 HSPs)
chr7 (1-125)||(40979930-40980059)
chr7 (2-125)||(28627936-28628064)
chr7 (1-108)||(36101779-36101891)
chr7 (57-132)||(28542007-28542081)
chr7 (46-125)||(38135265-38135344)
chr7 (54-108)||(37976403-37976457)
chr7 (46-118)||(1569174-1569246)
chr7 (1-120)||(27648936-27649060)
chr7 (54-125)||(21517440-21517511)
chr7 (46-125)||(36239848-36239927)
chr7 (54-103)||(5577547-5577596)
chr7 (1-125)||(9210706-9210835)
chr7 (1-132)||(32631709-32631844)
chr7 (1-119)||(27893565-27893688)
chr7 (46-125)||(36136915-36136994)
chr7 (1-119)||(43281831-43281954)
chr7 (1-119)||(45836484-45836607)
chr7 (1-125)||(42187592-42187721)
chr7 (3-104)||(42969870-42969976)
chr7 (1-93)||(2885724-2885821)
chr7 (60-125)||(24549754-24549819)
chr7 (54-119)||(35922410-35922475)
chr7 (1-137)||(38607132-38607272)
chr7 (54-125)||(12966167-12966238)
chr7 (54-125)||(14057629-14057700)
chr7 (54-125)||(14367657-14367728)
chr7 (49-108)||(21078085-21078144)
chr7 (58-125)||(45601627-45601694)
chr7 (54-120)||(5418223-5418288)
chr7 (46-124)||(26741946-26742024)
chr7 (52-125)||(28562423-28562497)
chr7 (1-47)||(46355858-46355904)
chr7 (54-108)||(47848841-47848895)
chr7 (9-94)||(47852269-47852359)
chr7 (46-123)||(2882788-2882865)
chr7 (64-125)||(32368407-32368468)
chr7 (2-47)||(39812172-39812217)
chr7 (49-125)||(22174151-22174227)
chr7 (1-33)||(30914504-30914536)
chr7 (9-108)||(33103094-33103198)
chr7 (51-119)||(35559050-35559118)
chr7 (47-126)||(40169805-40169884)
chr7 (54-125)||(44401187-44401256)
[»] chr1 (43 HSPs)
chr1 (1-125)||(41560380-41560509)
chr1 (1-125)||(29128934-29129064)
chr1 (1-125)||(8796360-8796489)
chr1 (1-125)||(11941582-11941711)
chr1 (11-132)||(36623897-36624021)
chr1 (1-125)||(38807673-38807802)
chr1 (2-125)||(52532619-52532747)
chr1 (1-105)||(4707223-4707331)
chr1 (1-119)||(25979233-25979356)
chr1 (54-125)||(27520267-27520338)
chr1 (54-125)||(40416522-40416593)
chr1 (10-103)||(19908046-19908144)
chr1 (1-125)||(52561591-52561720)
chr1 (57-117)||(10200369-10200429)
chr1 (2-125)||(42501259-42501387)
chr1 (54-118)||(43375658-43375722)
chr1 (54-125)||(3818916-3818987)
chr1 (54-125)||(7762497-7762568)
chr1 (46-125)||(9509469-9509548)
chr1 (54-121)||(29577203-29577269)
chr1 (1-119)||(37311757-37311880)
chr1 (46-125)||(39318280-39318359)
chr1 (83-125)||(8676954-8676996)
chr1 (1-86)||(28090696-28090786)
chr1 (12-125)||(32404539-32404657)
chr1 (1-105)||(37462878-37462986)
chr1 (46-115)||(52878351-52878420)
chr1 (59-119)||(4001520-4001580)
chr1 (57-117)||(6025764-6025824)
chr1 (46-101)||(6084150-6084205)
chr1 (54-101)||(13827640-13827687)
chr1 (83-125)||(8203223-8203265)
chr1 (49-119)||(8672075-8672145)
chr1 (46-124)||(9599446-9599524)
chr1 (53-119)||(10569130-10569196)
chr1 (58-132)||(32082821-32082894)
chr1 (2-119)||(39140672-39140794)
chr1 (54-119)||(990518-990583)
chr1 (46-119)||(19936617-19936690)
chr1 (54-107)||(40920589-40920642)
chr1 (1-76)||(21769713-21769793)
chr1 (1-100)||(25715328-25715432)
chr1 (49-125)||(38869033-38869109)
[»] chr8 (30 HSPs)
chr8 (1-108)||(490503-490615)
chr8 (46-105)||(29520820-29520879)
chr8 (46-106)||(43904717-43904777)
chr8 (54-125)||(30559844-30559915)
chr8 (8-125)||(2216439-2216559)
chr8 (1-107)||(16917352-16917462)
chr8 (48-125)||(17491708-17491785)
chr8 (1-125)||(35914603-35914732)
chr8 (7-119)||(45041324-45041440)
chr8 (1-125)||(45419386-45419515)
chr8 (1-104)||(31715992-31716102)
chr8 (58-125)||(33827821-33827888)
chr8 (58-125)||(35643670-35643737)
chr8 (1-125)||(5908797-5908926)
chr8 (46-119)||(36069759-36069832)
chr8 (46-119)||(38391945-38392018)
chr8 (58-134)||(12025920-12025995)
chr8 (46-125)||(16705898-16705978)
chr8 (1-108)||(23492202-23492314)
chr8 (54-125)||(28169543-28169614)
chr8 (1-119)||(42469729-42469852)
chr8 (54-124)||(9904942-9905012)
chr8 (60-122)||(35825522-35825584)
chr8 (61-114)||(12966381-12966434)
chr8 (49-122)||(27037789-27037862)
chr8 (54-135)||(33076267-33076346)
chr8 (46-119)||(35362702-35362775)
chr8 (54-119)||(41971850-41971915)
chr8 (57-125)||(10079970-10080038)
chr8 (54-94)||(42584541-42584581)
[»] chr4 (42 HSPs)
chr4 (1-125)||(26037507-26037636)
chr4 (1-115)||(55007907-55008026)
chr4 (46-118)||(27049229-27049301)
chr4 (1-116)||(55388213-55388333)
chr4 (1-119)||(26024852-26024975)
chr4 (2-132)||(31459139-31459273)
chr4 (1-119)||(31959816-31959939)
chr4 (1-103)||(34208271-34208378)
chr4 (7-125)||(39708584-39708707)
chr4 (56-118)||(25574982-25575044)
chr4 (58-124)||(31043224-31043290)
chr4 (55-125)||(45204900-45204970)
chr4 (1-114)||(48622545-48622663)
chr4 (54-119)||(30621261-30621326)
chr4 (1-125)||(35690422-35690551)
chr4 (1-125)||(37488242-37488371)
chr4 (1-93)||(39100538-39100635)
chr4 (46-119)||(56439623-56439696)
chr4 (1-119)||(1777019-1777142)
chr4 (49-124)||(42639075-42639150)
chr4 (46-125)||(49987559-49987638)
chr4 (54-125)||(51421881-51421952)
chr4 (46-108)||(53518375-53518437)
chr4 (1-93)||(47265197-47265294)
chr4 (50-119)||(55768555-55768624)
chr4 (50-119)||(55832811-55832880)
chr4 (54-106)||(26510558-26510610)
chr4 (2-125)||(37042667-37042795)
chr4 (46-101)||(5306471-5306526)
chr4 (54-125)||(21107143-21107214)
chr4 (54-101)||(31339699-31339746)
chr4 (55-125)||(40420275-40420343)
chr4 (54-125)||(47372802-47372873)
chr4 (54-125)||(53540441-53540512)
chr4 (49-119)||(21237015-21237085)
chr4 (54-108)||(41192229-41192283)
chr4 (54-119)||(47147530-47147593)
chr4 (60-125)||(28550521-28550586)
chr4 (46-119)||(34233076-34233149)
chr4 (48-93)||(41729504-41729549)
chr4 (54-125)||(33225895-33225964)
chr4 (54-118)||(44384988-44385052)
[»] chr5 (26 HSPs)
chr5 (46-108)||(418086-418148)
chr5 (54-126)||(9235197-9235269)
chr5 (1-119)||(13561388-13561511)
chr5 (54-125)||(14667922-14667993)
chr5 (1-125)||(11675680-11675810)
chr5 (54-124)||(12576920-12576990)
chr5 (7-119)||(38685124-38685241)
chr5 (54-118)||(17340496-17340560)
chr5 (1-119)||(2915498-2915620)
chr5 (1-119)||(3302001-3302124)
chr5 (46-125)||(6889144-6889223)
chr5 (58-125)||(14725669-14725736)
chr5 (3-119)||(1287583-1287704)
chr5 (1-85)||(18855798-18855887)
chr5 (49-125)||(5303595-5303673)
chr5 (7-93)||(5558324-5558415)
chr5 (58-125)||(23980095-23980162)
chr5 (82-125)||(28186863-28186906)
chr5 (65-108)||(41894234-41894277)
chr5 (1-94)||(32442128-32442225)
chr5 (1-47)||(36551380-36551426)
chr5 (54-108)||(43557893-43557947)
chr5 (54-119)||(35615440-35615505)
chr5 (71-132)||(36200874-36200934)
chr5 (1-69)||(38132543-38132616)
chr5 (1-33)||(9460830-9460862)
[»] chr6 (19 HSPs)
chr6 (54-125)||(9593768-9593839)
chr6 (1-125)||(34507-34636)
chr6 (1-93)||(12890758-12890855)
chr6 (54-125)||(31818682-31818753)
chr6 (46-108)||(5096002-5096064)
chr6 (54-124)||(24665963-24666033)
chr6 (46-119)||(14389213-14389286)
chr6 (61-125)||(43119-43183)
chr6 (55-119)||(1748006-1748070)
chr6 (54-118)||(5897615-5897679)
chr6 (46-125)||(8364707-8364786)
chr6 (55-125)||(6055832-6055902)
chr6 (2-119)||(30031413-30031535)
chr6 (49-119)||(32756078-32756148)
chr6 (46-103)||(9568872-9568929)
chr6 (58-119)||(10098958-10099019)
chr6 (60-119)||(18238210-18238270)
chr6 (1-33)||(20864835-20864867)
chr6 (56-119)||(31831920-31831984)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-119)||(950-1073)
[»] scaffold0279 (1 HSPs)
scaffold0279 (82-125)||(17690-17733)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-119)||(16735-16858)
[»] scaffold0180 (1 HSPs)
scaffold0180 (54-119)||(25503-25569)
[»] scaffold0025 (1 HSPs)
scaffold0025 (46-108)||(39487-39549)
[»] scaffold0010 (1 HSPs)
scaffold0010 (46-124)||(160376-160454)


Alignment Details
Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 2377328 - 2377193
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggattacgctataatgttctatcatataccatagttggatccaactcattattctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377328 aacaataaccaagccttatctcactaagtggggccgacgacatggattacgctataatgttctatcatataccatagttggatccaactcattattctct 2377229  T
Q  101 aaatcttttttaatagtttatcttaggtcttcatct 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  2377228 aaatcttttttaatagtttatcttaggtcttcatct 2377193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9496146 - 9496017
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||||| || ||||||||||||  | | ||||||||     ||||| |||||||||||||||| |||||| |||||||||||||||||     
T  9496146 aacaacaaccaagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaa 9496047  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     |||||||||||| | |||||||| |||||    
T  9496046 cctctaaatctttctgaatagtttctctta 9496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 19336945 - 19337018
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| ||||||||||||| || |||||||    
T  19336945 attacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagttt 19337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12734980 - 12734857
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| |||| ||||||||     ||| | ||| |||||||||||| |||||| ||||||||||||||||      
T  12734980 aacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcattga 12734881  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||| ||||    
T  12734880 cctctaaatcctttctaatggttt 12734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 12141766 - 12141701
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||  |||||||||    
T  12141766 ataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 45543127 - 45543203
Alignment:
Q  48 tacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||| |||||||||||||||| |||||| ||||||| |||||||||  ||||||||||||| ||||||||| |||||    
T  45543127 tacgccataatgttctatcataaaccatatttggatcgaactcatta-cctctaaatcttttctaatagtttctctta 45543203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18959191 - 18959079
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    |||||||||||||||||||| |||||||||||| |  | ||||||||     || || |||||||||||||||| |||||| || ||||||||||||||     
T  18959191 aacaataaccaagccttatcccactaagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcattaa 18959092  T
Q  96 tctctaaatcttt 108  Q
    |||| || |||||    
T  18959091 tctccaagtcttt 18959079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 33504498 - 33504374
Alignment:
Q  7 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt-attctct 100  Q
    |||||||||||||| |||||||||||| || | | ||||||     ||||| ||||||||||||||||||||||| ||  |||||||| ||| | |||||    
T  33504498 aaccaagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctct 33504399  T
Q  101 aaatcttttttaatagtttatctta 125  Q
    | |||||| |||||||||| |||||    
T  33504398 agatctttcttaatagtttctctta 33504374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 38430157 - 38430041
Alignment:
Q  8 accaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctctaa 102  Q
    |||||||||||||||||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||    
T  38430157 accaagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaa 38430058  T
Q  103 atcttttttaatagttt 119  Q
    ||||||| |||| ||||    
T  38430057 atcttttctaatggttt 38430041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 9556430 - 9556500
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||||| ||||||  | |||||||||||||| || ||| |||||| ||||||||||||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatctta 9556500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2610868 - 2610745
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||||||||||||||||||||| ||   ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||      
T  2610868 aacaacaaccaagccttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattga 2610769  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||| ||||    
T  2610768 cctctaaatcctttctaatggttt 2610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8181060 - 8180933
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||| |||||||||| |||||||||||| || | |||||||| |     | ||||| |||||||||||| |||| | ||||||||||||||||      
T  8181060 aacaacaacgaagccttatcccactaagtggggtcggctacatggatcaaatgacactatagtgttctatcatacaccaaatttggatccaactcattga 8180961  T
Q  96 tctctaaatcttttttaatagtttatct 123  Q
     ||||||||| ||| |||| ||||||||    
T  8180960 cctctaaatcctttctaatggtttatct 8180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25834958 - 25834835
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| | | |||||||||||| |||||| ||||||||||||||||      
T  25834958 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcattga 25834859  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||| ||||    
T  25834858 cctctaaatcctttctaatggttt 25834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 33287643 - 33287572
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| || |||| ||||||||| | |||| |||||| |||||||||| |||||    
T  33287643 ataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctctta 33287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 37470193 - 37470264
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||||||| ||||| || |||||||||||||| |||||| |||| |  ||||||||| |||||    
T  37470193 ataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctctta 37470264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 42149712 - 42149791
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| |||||||||||||||| |||||| ||  ||||| |||| || |||||| |||||| |||||||||| |||||    
T  42149712 attacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctctta 42149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 39029808 - 39029738
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||| |||||||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  39029808 acgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 39029738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43573132 - 43573230
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatta 94  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||| |||| |||||| | |||| |||||||||||||||||    
T  43573132 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcatta 43573230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12882047 - 12882176
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| ||||||||| ||  | | ||||||||     ||||| | |||||||||||| | |||||| |||||||||||||||||     
T  12882047 aacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaa 12882146  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     |||||||| |||  || |||||| |||||    
T  12882147 cctctaaatatttcctagtagtttctctta 12882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 26784402 - 26784471
Alignment:
Q  56 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||| |||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||| |||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctctta 26784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31959801 - 31959672
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||||||||  ||||||||||| |  | ||||||||     || || ||| |||||||||||| |||||| ||||||||||||||||      
T  31959801 aacaacaaccaagccttatcctactaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcattga 31959702  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||| ||| |||| |||| |||||    
T  31959701 cctctaaatcctttctaatggtttctctta 31959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 45078008 - 45077884
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc--atta 94  Q
    |||| |||||||| |||||||||||||||||| ||   ||||||||     || || || ||||||||||||| || ||| || ||||||||||  ||||    
T  45078008 acaacaaccaagctttatctcactaagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactctcatta 45077909  T
Q  95 ttctctaaatcttttttaatagttt 119  Q
     ||||||||||||| ||||||||||    
T  45077908 atctctaaatctttcttaatagttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 45437063 - 45437010
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||||||||||| |||||||| ||||||||||  ||||| |||||||||||||    
T  45437063 taatgttctatcaaataccatatttggatccaatgcattaatctctaaatcttt 45437010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8197543 - 8197671
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  |||||||||||||     
T  8197543 aacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaa 8197642  T
Q  96 tctctaaatcttttttaatagtttatctt 124  Q
    ||| || |||||| |||||||||| ||||    
T  8197643 tctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8202303 - 8202431
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  |||||||||||||     
T  8202303 aacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaa 8202402  T
Q  96 tctctaaatcttttttaatagtttatctt 124  Q
    ||| || |||||| |||||||||| ||||    
T  8202403 tctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 32402722 - 32402666
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttt 110  Q
    |||||||||||||||||||| || ||  ||||||||||||| |||||| ||||||||    
T  32402722 ataatgttctatcatataccttatttctatccaactcattaatctctagatcttttt 32402666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 21834772 - 21834705
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||| | || |||||||||||||| ||| ||||| |||  |||||||||||||||    
T  21834772 tgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagtttatctta 21834705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 23915745 - 23915824
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| ||| |||||||||||| |||||||||   |||| ||||||| |||||| || ||| |||||||||| |||||    
T  23915745 attacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctctta 23915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 23997829 - 23997747
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    |||| ||| |||| ||||| | |||||| ||||||||||||||||   ||||||||||||| |||| |||| ||||||||||||    
T  23997829 acgccatagtgttttatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt-tcttaggtcttc 23997747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 26670984 - 26670925
Alignment:
Q  60 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||| | |||| || | |||||||||||| ||||||||||||| ||||||||||    
T  26670984 ttctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagttt 26670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 6219187 - 6219133
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    |||||||||||||||| |||||| || | ||||||||| || |||||||||||||    
T  6219187 ataatgttctatcataaaccatatttcggtccaactcactaatctctaaatcttt 6219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9531602 - 9531688
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttgga 82  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||| |||||| |||||| |||||    
T  9531602 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatatttgga 9531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 37452286 - 37452348
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 116  Q
    |||||||||||||||| |||||| ||   |||||||||||| ||||||| ||||| |||||||    
T  37452286 ataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatag 37452348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 11412921 - 11412865
Alignment:
Q  62 ctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||| |||||| ||||||||||||||||| ||||| |||||||  |||||||||    
T  11412921 ctatcataaaccatatttggatccaactcattaatctct-aatctttcctaatagttt 11412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 19235046 - 19235115
Alignment:
Q  56 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||||| ||  |||||| |||||| |||||| |||||| | |||||||| |||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctctta 19235115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17429330 - 17429298
Alignment:
Q  1 aacaataaccaagccttatctcactaagtgggg 33  Q
    ||||| |||||||||||||||||||||||||||    
T  17429330 aacaacaaccaagccttatctcactaagtgggg 17429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45289093 - 45289222
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| ||||||||||||  | ||||||||||     || ||||||||||||||||||| |||||| |||||||||||||||||     
T  45289093 aacaacaaccaagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcattaa 45289192  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||  ||||||||| |||||    
T  45289193 tctctaaatctttcctaatagtttctctta 45289222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 49042217 - 49042087
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatata-ccatagttggatccaactcatta 94  Q
    ||||| |||||||||||||||||| |||||||| || | ||||||||     ||||| ||| |||||||||||| | ||||| |||||||||||||||||    
T  49042217 aacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcatta 49042118  T
Q  95 ttctctaaatcttttttaatagtttatctta 125  Q
      ||||||||||||  ||||||||| |||||    
T  49042117 acctctaaatctttcctaatagtttctctta 49042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 53519860 - 53519725
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||||||||||||||||||||| || | |||||||| |     ||  ||| |||||||||| | ||| || ||||||||||||||||      
T  53519860 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcattga 53519761  T
Q  96 tctctaaatcttttttaatagtttatcttaggtcttc 132  Q
     |||||||||||||||||| |||| ||||||||||||    
T  53519760 cctctaaatcttttttaatggttt-tcttaggtcttc 53519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 49841838 - 49841767
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||||||||||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  49841838 ataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctctta 49841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 36304196 - 36304123
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||| ||||||| |||||||| |||||| || |||||||||||||| |||||| |||||| ||||||||||    
T  36304196 attacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 48508515 - 48508386
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||| ||||||||||||      
T  48508515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattga 48508416  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||| ||| |||| |||| |||||    
T  48508415 cctctaaatcctttctaatggtttctctta 48508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 54128659 - 54128530
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     || || |||||||||||||||| |||||| |||| |||||||||||      
T  54128659 aacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattga 54128560  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||||||  | ||||||| |||||    
T  54128559 cctctaaatctttccttatagtttctctta 54128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 39600741 - 39600812
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||| || |||| | |||||||||||||||||  |||||||||||| |||||||||| |||||    
T  39600741 ataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagtttctctta 39600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 29601114 - 29601052
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 116  Q
    |||||||||||||||| || ||| ||| ||||||||||||| ||||||||||||| |||||||    
T  29601114 ataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 15296187 - 15296059
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||  | | |||| |||||||||| ||||||     
T  15296187 aacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattcattaa 15296088  T
Q  96 tctctaaatcttttttaatagtttatctt 124  Q
     ||||||||||||  ||||||||| ||||    
T  15296087 cctctaaatctttcctaatagtttctctt 15296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 40116390 - 40116450
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 106  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||| |||||||||||    
T  40116390 attacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 19162652 - 19162718
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||| ||||||| ||| ||||||||||||| |||||||||||||  ||||||||| |||||    
T  19162652 tgttctatcat-taccatacttgcatccaactcattaatctctaaatctttcctaatagtttctctta 19162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 19676089 - 19676212
Alignment:
Q  7 aaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    |||||||||||||| |||||||||||| |  | |||||||| |     ||| |||||| ||||||||| | |||| |||||||||||||||||  |||||    
T  19676089 aaccaagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcattaacctcta 19676188  T
Q  102 aatcttttttaatagtttatctta 125  Q
    ||| |||  ||||||||| |||||    
T  19676189 aatttttcctaatagtttctctta 19676212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 40116520 - 40116599
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| | |||||||||||||| |||||| || | |||||||||||| ||||||||||| |  ||||||||| |||||    
T  40116520 attacgccacaatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagtttctctta 40116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 50960697 - 50960768
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||| ||||| ||| |||||| ||||||||||||||||| |||||||| ||||  ||||||||| |||||    
T  50960697 ataatggtctatgatacaccatatttggatccaactcattaatctctaaacctttcctaatagtttctctta 50960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 19758109 - 19758032
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    |||||||||||||||| |||||| |  |||||||||||||| ||||||||| |||  ||||||||| || |||||||||    
T  19758109 ataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttc-taggtcttc 19758032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40106622 - 40106720
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 94  Q
    ||||| |||||||||||||| |||||||||||| | || |||| |||     || |  |||||||||||||||| |||||| |||||||||||||||||    
T  40106622 aacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcatta 40106720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 52156086 - 52156204
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||| ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||      
T  52156086 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcattga 52156185  T
Q  96 tctctaaatcttttttaat 114  Q
     ||||||||| ||| ||||    
T  52156186 cctctaaatcctttctaat 52156204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 38431069 - 38431021
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaa 103  Q
    ||||||||||||||| |||||| |||||||||||||||||  |||||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 39235360 - 39235292
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 122  Q
    ||||||||||||| || |||||| || ||||||||||||||   |||||||||||  ||||||||||||    
T  39235360 ataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatc 39235292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 44571643 - 44571599
Alignment:
Q  60 ttctatcatataccatagttggatccaactcattattctctaaat 104  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaat 44571599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 50237695 - 50237759
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||| ||| ||  |||||||||| || ||||| ||||||| ||||||||||    
T  50237695 taatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatagttt 50237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 30294185 - 30294252
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||| ||||||| | |||| || |||||||||||||   || ||||||||||||||||||||||||||    
T  30294185 tgttttatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatctta 30294252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45374479 - 45374570
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 87  Q
    ||||| |||||||||||||| |||||||||||| |  | ||||||     ||||||| |||||||||||||  | |||||||||||||||||    
T  45374479 aacaacaaccaagccttatcccactaagtggggtcagctacatggattaaattacgccataatgttctatccgaaaccatagttggatccaa 45374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 46431767 - 46431810
Alignment:
Q  82 atccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctctta 46431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 55244500 - 55244453
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  55244500 ataatgttctatcatataccatatttctatccaactcattaatctcta 55244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 19737206 - 19737129
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    |||||||| ||||||| |||||| |  |||||||||||||| ||||||||| |||  ||||||||| || |||||||||    
T  19737206 ataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttc-taggtcttc 19737129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 26490513 - 26490467
Alignment:
Q  78 ttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  26490513 ttggatcaaactcattagtctctaaatcttttctaatagtttctctt 26490467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 35033373 - 35033303
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  35033373 acgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 35033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 37779099 - 37779045
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    |||||||||||||||| |||||| | ||||| | ||||||| |||||||||||||    
T  37779099 ataatgttctatcataaaccatattcggatctagctcattaatctctaaatcttt 37779045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45486851 - 45486983
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatatacca---tagttggatccaactcat 92  Q
    ||||| |||||||| ||||| ||||||||||||||| | ||||||||     || || |||||||||||||||| ||||   || |||| ||||| ||||    
T  45486851 aacaacaaccaagctttatcccactaagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatattatttggttccaagtcat 45486950  T
Q  93 tattctctaaatcttttttaatagtttatctta 125  Q
    || |||| || |||||  ||||||||| |||||    
T  45486951 taatctcaaagtctttcataatagtttctctta 45486983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 11284210 - 11284157
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatctt 107  Q
    ||||||||| ||||||||||||| ||  ||||||||||||| |||||| |||||    
T  11284210 ataatgttcaatcatataccatatttatatccaactcattaatctctacatctt 11284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 29475916 - 29475843
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||| ||| | |||||||||| || ||| ||  ||||||||||||| |||||| |||||| ||||||||||    
T  29475916 attacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagttt 29475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38060994 - 38060897
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    ||||| ||||||  |||||| |||||||||||| || | ||||||||     ||||| ||  |||||||||||| |||||| ||||||||||||||||    
T  38060994 aacaacaaccaattcttatcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcatt 38060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 39208830 - 39208789
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattat 95  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  39208830 ataatgttctatcataaaccatatttggatcctactcattat 39208789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 42026591 - 42026667
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||| ||||||||||||||||||||||| ||  ||| ||||||||| || ||| |||  | |||||||||| |||||    
T  42026591 acgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctctta 42026667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 52678902 - 52678982
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 126  Q
    ||||||||||||| || ||||||  | |||| ||| || ||||||||||  ||||||||||||  ||||||||| ||||||    
T  52678902 attacgctataatattatatcatgaatcatatttgaattcaactcattaacctctaaatctttcataatagtttctcttag 52678982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 40979930 - 40980059
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||||||||||||      
T  40979930 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattga 40980029  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||||||| ||||||||| |||||    
T  40980030 cctctaaatcttttctaatagtttctctta 40980059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 28627936 - 28628064
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    |||| ||| |||||||||| |||||||||| | || | ||||||||     ||||| |||||||||||||||| |||| | ||| ||||||||||||| |    
T  28627936 acaacaactaagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaat 28628035  T
Q  97 ctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||  ||||||||| |||||    
T  28628036 ctctaaatctttcctaatagtttctctta 28628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36101779 - 36101891
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| | || ||||||||     ||||  |||||||||||||||| |||||| || ||||||||||||||     
T  36101779 aacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcattaa 36101878  T
Q  96 tctctaaatcttt 108  Q
    ||| |||||||||    
T  36101879 tctataaatcttt 36101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 28542007 - 28542081
Alignment:
Q  57 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||| || |||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagtttttc-taggtcttc 28542081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 38135265 - 38135344
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| ||||| ||||||||||  ||||| || | |||||||||||| |||||||||||||||||||||||| |||||    
T  38135265 attacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagtttctctta 38135344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 37976457 - 37976403
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  37976457 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatcttt 37976403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 1569246 - 1569174
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    |||||||  ||||||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||||||    
T  1569246 attacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagtt 1569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27649060 - 27648936
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| | | |||||||||||| |||| | ||||||||||||||||      
T  27649060 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcattga 27648961  T
Q  96 tctctaaatcttttttaatagttta 120  Q
     ||||||||||||| |||| |||||    
T  27648960 cctctaaatcttttctaatggttta 27648936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 21517440 - 21517511
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||| ||||||| | |||| |||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  21517440 ataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctctta 21517511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 36239848 - 36239927
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||| ||| ||||||||| |||  ||||||||| |||||    
T  36239848 attacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctctta 36239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 5577547 - 5577596
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaa 103  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  5577547 ataatgttctatcataaaccatacttggatccaactcattagtctctaaa 5577596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 9210706 - 9210835
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||| |||||||||| |||||||||||| |  | ||||||||     ||||| |||||||| ||||||| |||||| |||||||||||||||||     
T  9210706 aacaacaacgaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcattaa 9210805  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     |||||||| |||  ||| ||||| |||||    
T  9210806 cctctaaatttttcctaaaagtttctctta 9210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32631844 - 32631709
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||| ||| |     ||| |||  ||||||||| | |||||| ||||||||||||||||      
T  32631844 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcattga 32631745  T
Q  96 tctctaaatcttttttaatagtttatcttaggtcttc 132  Q
     ||||||||||||| |||| |||| ||||||||||||    
T  32631744 cctctaaatcttttctaatggttt-tcttaggtcttc 32631709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27893565 - 27893688
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||| ||| || | ||||| ||     || || |||||||||||||||| | |||| || | |||| |||||||     
T  27893565 aacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcattaa 27893664  T
Q  96 tctctaaatcttttttaatagttt 119  Q
    ||||||||||||| ||||||||||    
T  27893665 tctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 36136994 - 36136915
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||| |||||||||||||||||| |||||| |||||||||| ||||||   |||||||||||   |||||||| |||||    
T  36136994 attaccctataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatagtttctctta 36136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 43281954 - 43281831
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||      
T  43281954 aacaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 43281855  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  43281854 cctctaaatcttttctaatggttt 43281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 45836484 - 45836607
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||| ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||      
T  45836484 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattga 45836583  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||| ||||    
T  45836584 cctctaaatcctttctaatggttt 45836607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 42187721 - 42187592
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataa-tgttctatcatataccatagttggatccaactcatta 94  Q
    ||||| ||| |||||||||| |||||||||||| || | ||||||||     ||||| |||| |||||||||||| |||| | |||||||||||| ||||    
T  42187721 aacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaactaatta 42187623  T
Q  95 ttctctaaatcttttttaatagtttatctta 125  Q
     ||||||||| |||  ||||||||| |||||    
T  42187622 atctctaaatatttcctaatagtttctctta 42187592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 42969976 - 42969870
Alignment:
Q  3 caataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattc 97  Q
    ||||||| |||||||||| |||||||||||| || | ||||||||     ||  | ||||||||| |||||| |||||| |||||||||||||||||  |    
T  42969976 caataacaaagccttatcccactaagtggggtcggctacatggatcaaattatacgataatgttcaatcataaaccatatttggatccaactcattaacc 42969877  T
Q  98 tctaaat 104  Q
    |||||||    
T  42969876 tctaaat 42969870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2885724 - 2885821
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||||| |||||| |||| |||||||||||    
T  2885724 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcatt 2885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 24549754 - 24549819
Alignment:
Q  60 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||| |||||||||| |||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttctctta 24549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 35922475 - 35922410
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||| | |||| || ||| ||||||||||  |||||||||||| ||||||||||    
T  35922475 ataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagttt 35922410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38607272 - 38607132
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||| | |||||||||| | || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||      
T  38607272 aacaacaaccaagccttaacccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 38607173  T
Q  96 tctctaaatcttttttaatagtttatcttaggtcttcatctc 137  Q
     ||||||||| ||| |||| |||| |||||||||||| ||||    
T  38607172 cctctaaatcctttctaatggttt-tcttaggtcttcctctc 38607132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 12966238 - 12966167
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||| | |||||||||||||| ||  |||||| |||||| ||||||||| ||| |||||||||| |||||    
T  12966238 ataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctctta 12966167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 14057700 - 14057629
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14057700 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 14367728 - 14367657
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14367728 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14367657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 21078144 - 21078085
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    |||| |||||||||||||||| |||| | ||||||||||||||||   ||||||||||||    
T  21078144 acgccataatgttctatcatacaccaaatttggatccaactcattgacctctaaatcttt 21078085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 45601694 - 45601627
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| | |||| || |||||||||||||| |||||| |||||| ||||| |||| |||||    
T  45601694 tgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctctta 45601627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 5418288 - 5418223
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttta 120  Q
    |||||||||||||||| |||||| || | ||||||||||||  |||| ||||||| |||||||||||    
T  5418288 ataatgttctatcataaaccatatttcggtccaactcatta-actcttaatctttcttaatagttta 5418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 26741946 - 26742024
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||  | || |||| |||  ||||||||||||||    
T  26741946 attacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtttatctt 26742024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 28562423 - 28562497
Alignment:
Q  52 ctataatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||| ||||||| | ||||| | ||||||||||| ||| |||||||||||||  ||||||||| |||||    
T  28562423 ctataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctctta 28562497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 46355858 - 46355904
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat 47  Q
    ||||| ||||||||||||||||||||||||||| || | ||||||||    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggat 46355904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 47848895 - 47848841
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    |||||||||||||||| |||||| ||||||||| ||||||| || | ||||||||    
T  47848895 ataatgttctatcataaaccatatttggatccagctcattaatccccaaatcttt 47848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 47852359 - 47852269
Alignment:
Q  9 ccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 94  Q
    |||||||||||| | |||||||||| || | ||||||||     ||||| |||||||||||| ||| |||| | |||||||||||||||||    
T  47852359 ccaagccttatccccctaagtggggtcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcatta 47852269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 2882788 - 2882865
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatct 123  Q
    ||||||| |||||||||||||||| |||||  || |||||||||||||| | || |||  |||  |||||||||||||    
T  2882788 attacgccataatgttctatcataaaccatgtttcgatccaactcattaatttccaaaggtttcctaatagtttatct 2882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 32368407 - 32368468
Alignment:
Q  64 atcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||| || ||||||||||| || ||||||||||||  ||||||| || |||||    
T  32368407 atcatataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctctta 32368468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 39812217 - 39812172
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggat 47  Q
    |||| |||||||||||||| |||||||||||||| || ||||||||    
T  39812217 acaacaaccaagccttatcccactaagtggggccaactacatggat 39812172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 22174227 - 22174151
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||| |||||||||||||| |||||||| ||  ||| || |||||| |||||| |||||| || ||||||| |||||    
T  22174227 acgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctctta 22174151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30914504 - 30914536
Alignment:
Q  1 aacaataaccaagccttatctcactaagtgggg 33  Q
    |||||||||||||||||||| ||||||||||||    
T  30914504 aacaataaccaagccttatcccactaagtgggg 30914536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 33103198 - 33103094
Alignment:
Q  9 ccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 103  Q
    ||||||||||||  ||||||||||| || | ||||||||     ||||||||  |||||||||||| |||||| |  ||| |||||||||| |||||||     
T  33103198 ccaagccttatcctactaagtggggtcggctacatggatcaaattacgctatggtgttctatcataaaccatattccgattcaactcattaatctctaag 33103099  T
Q  104 tcttt 108  Q
    |||||    
T  33103098 tcttt 33103094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 35559050 - 35559118
Alignment:
Q  51 gctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||| |||| || | | ||||||||||||||||   ||||||||||||| |||| ||||    
T  35559050 gctataatgttctaccataaactaaatttggatccaactcattgacctctaaatcttttctaatggttt 35559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 40169884 - 40169805
Alignment:
Q  47 ttacgctataatgttctatcatataccata-gttggatccaactcattattctctaaatcttttttaatagtttatcttag 126  Q
    ||||||| ||||||||||||||| |||||| ||||| ||||||| | || ||||| | ||||| |||||||||| ||||||    
T  40169884 ttacgctgtaatgttctatcatagaccatatgttgg-tccaactaactaatctctgagtctttcttaatagtttctcttag 40169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 44401187 - 44401256
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  44401187 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 44401256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 41560509 - 41560380
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||||||||||  ||||| |||||||||||||||||     
T  41560509 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcattaa 41560410  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    ||||||||| | |  ||||||||| |||||    
T  41560409 tctctaaatgtatcctaatagtttctctta 41560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29129064 - 29128934
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg------attacgctataatgttctatcatataccatagttggatccaactcatta 94  Q
    ||||| ||||||||||||||||||||||||||| || | ||||||      ||||| | |||||||||||||||| |||||| ||||||||||||  |||    
T  29129064 aacaaaaaccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaacttgtta 29128965  T
Q  95 ttctctaaatcttttttaatagtttatctta 125  Q
      ||||||||||||  ||||||||| |||||    
T  29128964 acctctaaatctttcctaatagtttctctta 29128934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8796489 - 8796360
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||||     ||| |||||||||||||||| |||||| ||  |||||| ||||||     
T  8796489 aacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaa 8796390  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    | |||| |||||| |||||||||| |||||    
T  8796389 tatctagatctttcttaatagtttctctta 8796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11941582 - 11941711
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||| |||| ||||||||| ||||||| ||||||||     ||||| |||||||| ||||||| |||||| |  ||||||||||| ||     
T  11941582 aacaacaaccaagccgtatcccactaagtgaggccgactacatggatcaaaatacgccataatgttttatcataaaccatactccgatccaactcaataa 11941681  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||| |||||| || |||||    
T  11941682 tctctaaatcttttctaatagcttctctta 11941711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 36623897 - 36624021
Alignment:
Q  11 aagccttatctcactaagtggggccgacgacatggat---tac-gctataatgttctatcatataccatagttggatccaactcattattctctaaatct 106  Q
    |||||||||| |||||||| ||| |||| ||||||||   ||| || ||||||||| ||| || |||||| |||||||||||||||||  ||||||||||    
T  36623897 aagccttatcccactaagtagggtcgactacatggatcattacagccataatgttcgatcctaaaccatatttggatccaactcattagcctctaaatct 36623996  T
Q  107 tttttaatagtttatcttaggtcttc 132  Q
    ||| ||||||||| || |||||||||    
T  36623997 tttctaatagtttctc-taggtcttc 36624021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38807673 - 38807802
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||     |||||| ||| |||||||||||| |||||| ||||||||||||| ||      
T  38807673 aacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaactcgttga 38807772  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||| ||| |||| |||| |||||    
T  38807773 cctctaaatcctttctaatggtttctctta 38807802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 52532619 - 52532747
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    |||| ||||||||||| || |||||||||||| || | ||||| ||     ||||| |||||||||||||||| |||||| || | |||||||||||| |    
T  52532619 acaacaaccaagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaat 52532718  T
Q  97 ctctaaatcttttttaatagtttatctta 125  Q
     |||||||||||  ||||||||| |||||    
T  52532719 ttctaaatctttcctaatagtttctctta 52532747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4707223 - 4707331
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    ||||| |||||||||||||| |||||||||||| || | |||||     ||||||| ||| |||||||||||| |||| | |||||||||||||||||      
T  4707223 aacaacaaccaagccttatcccactaagtggggtcggctacatgatcaaattacgccatagtgttctatcataaaccaaatttggatccaactcattaac 4707322  T
Q  97 ctctaaatc 105  Q
    |||||||||    
T  4707323 ctctaaatc 4707331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25979233 - 25979356
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||      
T  25979233 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattga 25979332  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||| ||||    
T  25979333 cctctaaatcctttctaatggttt 25979356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 27520267 - 27520338
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| | |||| ||||||||| ||||||| ||||||||| |||| ||||||||| |||||    
T  27520267 ataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctctta 27520338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 40416593 - 40416522
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  40416593 ataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtctta 40416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 19908046 - 19908144
Alignment:
Q  10 caagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 103  Q
    ||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||| |||||| |||||| ||| ||||||||||||| ||||||||    
T  19908046 caagccttatcccactaagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctctaaa 19908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 52561591 - 52561720
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||||||||||| |  | |||||| |||||||||||||||||     
T  52561591 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactcattaa 52561690  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||||||  ||| ||||| |||||    
T  52561691 cctctaaatctttcctaacagtttctctta 52561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 10200369 - 10200429
Alignment:
Q  57 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 117  Q
    ||||||||||||| |||||| |||||||||||||||   |||||||||||||| |||||||    
T  10200369 atgttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaatagt 10200429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 42501387 - 42501259
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    ||||||||||| | ||||| |||||||| ||| || | ||||||||||     |||| |||||||||||||||| ||||| ||  ||||||||||||| |    
T  42501387 acaataaccaaactttatcccactaagtagggtcggctacatggattaaacgacgctgtaatgttctatcatattccatatttctatccaactcattaat 42501288  T
Q  97 ctctaaatcttttttaatagtttatctta 125  Q
    || || |||||| |||||| ||| |||||    
T  42501287 ctatagatctttcttaataatttctctta 42501259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 43375658 - 43375722
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    |||||||||||||||  |||||| || | |||||||||||| ||||||||||||| |||||||||    
T  43375658 ataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 3818916 - 3818987
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||| |||||| |||||| ||  || |||||||||| ||||||||||||| |||||||||| |||||    
T  3818916 ataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctctta 3818987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 7762497 - 7762568
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| ||| |||||| || ||||||||||||||   |||||||||||| ||||||||| |||||    
T  7762497 ataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctctta 7762568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 9509548 - 9509469
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| ||||||||| |||||| |||||| |||| || |||||||||  || |||||||||  |||||||||||||||    
T  9509548 attacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaatctttcctaatagtttatctta 9509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 29577203 - 29577269
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttat 121  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| ||||||||||||    
T  29577203 ataatgttctatcata-accatattttgatccagctcattaatctctagatctttcttaatagtttat 29577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37311757 - 37311880
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||      
T  37311757 aacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 37311856  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  37311857 cctctaaatcttttctaatggttt 37311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 39318359 - 39318280
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||||||||   ||||||||| ||| |||| |||| |||||    
T  39318359 attacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctta 39318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 8676954 - 8676996
Alignment:
Q  83 tccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctctta 8676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28090696 - 28090786
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcca 86  Q
    ||||| ||||||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| |||||||||    
T  28090696 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 32404539 - 32404657
Alignment:
Q  12 agccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 106  Q
    ||||||||| |||||||||||| || | ||||||||     ||||| || ||||| ||||||| |||||  ||||||  ||||||||| |||||||||||    
T  32404539 agccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaaatct 32404638  T
Q  107 tttttaatagtttatctta 125  Q
    ||  ||||||||| |||||    
T  32404639 ttcctaatagtttctctta 32404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37462878 - 37462986
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| |||||| || |||| |||||||||     
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccata-tttgatcaaactcattaa 37462976  T
Q  96 tctctaaatc 105  Q
     |||||||||    
T  37462977 cctctaaatc 37462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 52878351 - 52878420
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaata 115  Q
    ||||| |||||| ||||||||||| | | ||||||||| ||||||||||  ||||||||||||| |||||    
T  52878351 attacactataaagttctatcataaatcgtagttggattcaactcattaacctctaaatcttttataata 52878420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 4001520 - 4001580
Alignment:
Q  59 gttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||||| | |||||| ||||||||||||||||   |||||||||||||||||| ||||    
T  4001520 gttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttttaatggttt 4001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 6025824 - 6025764
Alignment:
Q  57 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 117  Q
    ||||||||||| |||||||| ||  ||||||||||||| |||||| |||||||||| ||||    
T  6025824 atgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagt 6025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 6084205 - 6084150
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    ||||||| ||| |||||||||||| |||||| || |||||||||||||| ||||||    
T  6084205 attacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 13827640 - 13827687
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  13827640 ataatgttctatcatataccatatttctatccaactcattaatctcta 13827687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 8203223 - 8203265
Alignment:
Q  83 tccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  8203223 tccaactcattaatctctagatcttttttaatagtttctctta 8203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 8672145 - 8672075
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||| |||||||||||| |||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  8672145 acgctatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 8672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 9599446 - 9599524
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    ||||||| |||| ||||||||||| ||||||  |||||| |||||||||  |||||||| |||  ||||||||| ||||    
T  9599446 attacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctctt 9599524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 10569130 - 10569196
Alignment:
Q  53 tataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||||| ||| ||  ||||| || |||| |||||| |||||| ||||||||||    
T  10569130 tataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagttt 10569196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 32082821 - 32082894
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    |||||||||| | |||||| ||| ||||||||||||   ||||||||||||| |||| |||| ||||||||||||    
T  32082821 tgttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatggttt-tcttaggtcttc 32082894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 39140794 - 39140672
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    |||| |||||||| ||||| |||||||||||| || | ||||| ||     ||||| |||||||||||||  | |||||| |||||||||||| ||||      
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaattaac 39140695  T
Q  97 ctctaaatcttttttaatagttt 119  Q
    |||||||| |||  |||||||||    
T  39140694 ctctaaatttttcctaatagttt 39140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 990518 - 990583
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||| ||||||  | |||||||||||||| |||||| |||| | | ||||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagttt 990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 19936690 - 19936617
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||  ||||||||||||||  |||||| ||||||| |||||||||   |||||||||||  |||||||||    
T  19936690 attacgccgtaatgttctatcattaaccatatttggatctaactcattaacatctaaatctttcctaatagttt 19936617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 40920589 - 40920642
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatctt 107  Q
    ||||| ||||||||||||||||| ||  ||||||||||||| |||||| |||||    
T  40920589 ataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21769713 - 21769793
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccata 76  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||||| | ||||||    
T  21769713 aacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaattacgccataatgttctatcacaaaccata 21769793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25715328 - 25715432
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| ||||||||| || || | ||||||     ||||||| ||||| |||||||||| |||||| || | | ||||||||||     
T  25715328 aacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcattaa 25715427  T
Q  96 tctct 100  Q
    |||||    
T  25715428 tctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 38869109 - 38869033
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||| |||||||||||||||||||||||  |  ||||||| ||||| || ||| |||||| |||||| ||| |||||    
T  38869109 acgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctctta 38869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 490615 - 490503
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| || ||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| ||||||||||||||| |     
T  490615 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatcaa 490516  T
Q  96 tctctaaatcttt 108  Q
    |||||||||||||    
T  490515 tctctaaatcttt 490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 29520879 - 29520820
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatc 105  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  29520879 attacgccataatgttctatcataaaccatatttggatccaactcattaatctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 43904717 - 43904777
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 106  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  43904717 attacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatct 43904777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 30559915 - 30559844
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| ||||||  |||||||||||||||| |||||||||||||  | ||||||| |||||    
T  30559915 ataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttctctta 30559844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 2216559 - 2216439
Alignment:
Q  8 accaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattattctctaa 102  Q
    |||||||||||||||||| ||||||| || | ||||||     ||||| |||||||||||||||||| | |||| | ||||||||||||||  |||||||    
T  2216559 accaagccttatctcactgagtggggtcggctacatggatcaaattacactataatgttctatcata-aacatattaggatccaactcattgatctctaa 2216461  T
Q  103 atcttttttaatagtttatctta 125  Q
    ||| || |||||||||| |||||    
T  2216460 atc-ttcttaatagtttctctta 2216439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16917462 - 16917352
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta----cgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    ||||||||||||| |||||| |||||||||||| || | |||||||| |    |  |  ||||||||||||||||||||| ||  ||||||||||||| |    
T  16917462 aacaataaccaagtcttatcccactaagtggggacggctacatggatcaaaagcagtcaaatgttctatcatataccatatttctatccaactcattaat 16917363  T
Q  97 ctctaaatctt 107  Q
    |||||||||||    
T  16917362 ctctaaatctt 16917352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 17491708 - 17491785
Alignment:
Q  48 tacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||| |||||||||||||||| |||||| || | |||||||||||| |||| || ||||| |||||||||| |||||    
T  17491708 tacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagtttctctta 17491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 35914603 - 35914732
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||| ||||||||||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| || | ||||||||||||     
T  35914603 aacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcattaa 35914702  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    |||  || |||||  ||||||||| |||||    
T  35914703 tcttcaagtctttcctaatagtttctctta 35914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 45041324 - 45041440
Alignment:
Q  7 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    |||||||||||||| |||||||||||| |  | ||||||||     ||||| ||||||  |||||||| |||||| |||||||||||||||||  |||||    
T  45041324 aaccaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccata-ttggatccaactcattaacctcta 45041422  T
Q  102 aatcttttttaatagttt 119  Q
    |||||||  |||||||||    
T  45041423 aatctttcctaatagttt 45041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 45419515 - 45419386
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||||| |||| | ||||||| ||||||||||    
T  45419515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggatcaaactcattat 45419416  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
      | |||| ||||  ||||||||| |||||    
T  45419415 gatttaaacctttcctaatagtttctctta 45419386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31716102 - 31715992
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacg--acatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    ||||| |||||||||||||| |||||||||| |  ||||  ||||||||     ||||| ||||||||||||| || |||||| |||||||||||| |||    
T  31716102 aacaacaaccaagccttatcccactaagtggtggtgacgctacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaactaatt 31716003  T
Q  94 attctctaaat 104  Q
    | |||||||||    
T  31716002 aatctctaaat 31715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 33827821 - 33827888
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||| || ||||||| |||||| ||| ||||| |||||||||||||| |||||    
T  33827821 tgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttctctta 33827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 35643670 - 35643737
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||| ||| |||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaataatttctctta 35643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5908926 - 5908797
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||  |||||| |||| || || ||||||||     ||||| |||| ||||||||||| | |||| || ||||||||||||||     
T  5908926 aacaacaaccaagccttattccactaattgggtccaactacatggatccaattacgcaataaggttctatcataaatcatattttgatccaactcattaa 5908827  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    ||  |  ||||||||||||||||| |||||    
T  5908826 tccttggatcttttttaatagtttctctta 5908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 36069832 - 36069759
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||  ||||||||||||||| |||||| ||  | ||||||||||| ||||||||| ||| ||||||||||    
T  36069832 attacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagttt 36069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 38391945 - 38392018
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||| ||||| ||||||||||||||||| || ||||| |||||||| ||| || |||||| ||||| ||||    
T  38391945 attacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatggttt 38392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 12025995 - 12025920
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcat 134  Q
    |||||||||| | |||||| |||||||||||| |||   ||||||||||||| |||| |||| ||||||||||||||    
T  12025995 tgttctatcaaaaaccatatttggatccaacttattgacctctaaatcttttctaatggttt-tcttaggtcttcat 12025920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 16705978 - 16705898
Alignment:
Q  46 attacgctataatgttctatc-atataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| ||||||||| ||| |||||||||| || |||||||||||||| ||||||  | ||| |||||||||| |||||    
T  16705978 attacgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctta 16705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23492314 - 23492202
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| || |||||||||||||||||||||||| || | |||||||||     || | ||| |||||||||||||| |||| ||  |||||||||||||     
T  23492314 aacaacaaacaagccttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcattaa 23492215  T
Q  96 tctctaaatcttt 108  Q
    || ||| ||||||    
T  23492214 tcgctacatcttt 23492202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 28169614 - 28169543
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||| || ||||||| |||||| ||| ||||||||||||| |||| ||||||||  ||||||||| |||||    
T  28169614 ataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagtttctctta 28169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 42469729 - 42469852
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| || ||||||||| |  | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||      
T  42469729 aacaacaaccaagccttatcccaataagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 42469828  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  42469829 cctctaaatcttttctaatggttt 42469852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 9904942 - 9905012
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    |||||||| ||||||| ||| || || ||||||| |||||| | ||||||||||| |||||||||| ||||    
T  9904942 ataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttctctt 9905012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 35825522 - 35825584
Alignment:
Q  60 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 122  Q
    |||||||||| || ||| || | | |||||||||| |||||||||||||| ||||||||||||    
T  35825522 ttctatcataaacaatattttggttcaactcattagtctctaaatcttttctaatagtttatc 35825584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 12966381 - 12966434
Alignment:
Q  61 tctatcatataccatagttggatccaactcattattctctaaatcttttttaat 114  Q
    ||||||||| |||||| ||| || |||||||||| ||||||||||||| |||||    
T  12966381 tctatcataaaccatatttgaattcaactcattaatctctaaatctttcttaat 12966434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 27037862 - 27037789
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 122  Q
    |||| ||||| |||||||| |||||||| ||  ||||||||||||| ||| || ||||||  ||||||||||||    
T  27037862 acgccataatattctatcaaataccatatttctatccaactcattaatctttatatctttcctaatagtttatc 27037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 33076346 - 33076267
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcatc 135  Q
    ||||| |||||| ||| |||||| || | | |||||||||| ||||||||||| |||||||||||| || ||||||||||||    
T  33076346 ataatattctattataaaccatattttggtacaactcattaatctctaaatct-ttttaatagtttttc-taggtcttcatc 33076267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 35362702 - 35362775
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||| |||||||||||||||| |||||| ||   |||||||||||| | || ||||||||  |||||||||    
T  35362702 attacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagttt 35362775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 41971850 - 41971915
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||| || ||| ||   |||||||||||| ||||||||||||| ||| ||||||    
T  41971850 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 41971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 10079970 - 10080038
Alignment:
Q  57 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||| ||| |||| ||  ||||||||||||| |||||| |||||| |||| ||||| |||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttctta 10080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 42584581 - 42584541
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcatta 94  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  42584581 ataatgttctatcataaaccatatttggatccaaatcatta 42584541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26037507 - 26037636
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||| ||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||||||||||||      
T  26037507 aacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattca 26037606  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     ||||||||||||  ||||||||| |||||    
T  26037607 cctctaaatctttcctaatagtttctctta 26037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 55008026 - 55007907
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||||  |||||| ||||||||| |||||| || | ||||||||||||     
T  55008026 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcattaa 55007927  T
Q  96 tctctaaatcttttttaata 115  Q
    ||||||||||||| ||||||    
T  55007926 tctctaaatctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 27049229 - 27049301
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    ||||||| ||||||||| |||||| |||||| ||||| ||||||||||| ||| ||||||||| |||||||||    
T  27049229 attacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| |||| ||||||     ||||| | | |||||||||||||| | |||| || |||| |||||||||     
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaa 55388312  T
Q  96 tctctaaatcttttttaatag 116  Q
    |||| |||||||| |||||||    
T  55388313 tctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26024852 - 26024975
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| ||||||||| || || | ||||||||     ||| | |||||||||||||||| |||||   | ||||||||||||||     
T  26024852 aacaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaa 26024951  T
Q  96 tctctaaatcttttttaatagttt 119  Q
    |||||| |||||| ||||||||||    
T  26024952 tctctagatctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 31459273 - 31459139
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    |||| |||||||||||||| |||||||||||| ||   |||||||| |     ||| ||||||||| |||| | |||||| | ||||||||||||||| |    
T  31459273 acaacaaccaagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgttcaatcacacaccatattgggatccaactcattaat 31459174  T
Q  97 ctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    ||||||||||||  ||||||||| || |||||||||    
T  31459173 ctctaaatctttcctaatagtttttc-taggtcttc 31459139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31959816 - 31959939
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||      
T  31959816 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 31959915  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||||||||    
T  31959916 cctctaaatcctttctaatagttt 31959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34208271 - 34208378
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| || |||| |||| |||  |||||||| |     ||| |||||||||||||||| |||||| |||||||||||||||||     
T  34208271 aacaacaaccaagccttatcccaataaggggggtcgagtacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcattaa 34208370  T
Q  96 tctctaaa 103  Q
    ||||||||    
T  34208371 tctctaaa 34208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 39708707 - 39708584
Alignment:
Q  7 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    ||||||| |||||| |||||||||||| |||| ||||||||     ||||  ||| |||||||||||| |||||| ||||||||||||||||   |||||    
T  39708707 aaccaagtcttatcccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctcta 39708608  T
Q  102 aatcttttttaatagtttatctta 125  Q
    |||| ||| |||| |||| |||||    
T  39708607 aatcctttctaatggtttctctta 39708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 25575044 - 25574982
Alignment:
Q  56 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    |||||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||||||    
T  25575044 aatgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 31043290 - 31043224
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    |||||||||| | |||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctctt 31043224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 45204900 - 45204970
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||||| |||||| |||||||||||| ||||  ||||||||||||  ||||||||| |||||    
T  45204900 taatgttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatagtttctctta 45204970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48622545 - 48622663
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||||     |||| ||| |||||||||||| |||| | ||||||| ||||||||      
T  48622545 aacaacaaccaagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcattga 48622644  T
Q  96 tctctaaatcttttttaat 114  Q
     ||||||||||||| ||||    
T  48622645 cctctaaatcttttctaat 48622663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 30621261 - 30621326
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||| |||||| || | |||||| ||||| ||||||||||||| ||||||||||    
T  30621261 ataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagttt 30621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35690551 - 35690422
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| ||| |  ||||||| |||||||||     
T  35690551 aacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactcattaa 35690452  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
     |||||||| |||  ||||||||| |||||    
T  35690451 cctctaaatttttcgtaatagtttctctta 35690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37488371 - 37488242
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| ||||||||||||| | | ||||||     ||||||| |||||| ||||||||  |||||| || |||| |||| ||||     
T  37488371 aacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatgctctatcattaaccatattttgatcaaacttattaa 37488272  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    | |||| |||||| |||||||||| |||||    
T  37488271 tttctagatctttcttaatagtttctctta 37488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 39100538 - 39100635
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| || ||| ||||||||||||||||    
T  39100538 aacaacaaccaagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcatt 39100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 56439623 - 56439696
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||||||||| |||||| || ||||||||| |||| | || ||||||||  |||||||||    
T  56439623 attacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagttt 56439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1777019 - 1777142
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| || ||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||      
T  1777019 aacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcattga 1777118  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  1777119 cctctaaatcttttctaatggttt 1777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 42639075 - 42639150
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    |||| |||||||||||||| |||||||| ||  ||||||||||||| || ||| |||||| |||||||||| ||||    
T  42639075 acgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctctt 42639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 49987638 - 49987559
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| |||||| ||||||||  |||||||||||||||| ||||||  |||| || ||||| |||||||||| |||||    
T  49987638 attacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttctctta 49987559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 51421952 - 51421881
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||  |||||||||| ||||||  ||||||||||||  ||||||||| |||||    
T  51421952 ataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctctta 51421881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 53518375 - 53518437
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||||| ||| |||||||||||| |||||| || ||||||||||||||  ||||||||||||    
T  53518375 attacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatcttt 53518437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47265197 - 47265294
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    |||||||||||||||||||| ||||||||| || || | ||||||     ||||| ||||| |||||||||||| | || | ||||||||||||||||    
T  47265197 aacaataaccaagccttatcccactaagtgaggtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcatt 47265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 55768555 - 55768624
Alignment:
Q  50 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55768555 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 55832811 - 55832880
Alignment:
Q  50 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55832811 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55832880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 26510610 - 26510558
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatct 106  Q
    |||||||||||||  | |||||| ||||||||||||||||| |||||||||||    
T  26510610 ataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 37042667 - 37042795
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    |||| |||||||||||||| |||||||| ||| || | |||||||| |     | | |||||||||||||| ||||| || ||  |||||||||| || |    
T  37042667 acaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataat 37042766  T
Q  97 ctctaaatcttttttaatagtttatctta 125  Q
    ||||| |||||| |||||||||| |||||    
T  37042767 ctctagatctttcttaatagtttctctta 37042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 5306526 - 5306471
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||| ||||||    
T  5306526 attacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 21107214 - 21107143
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||| ||||||||||| |||||| |||||||||||| |||| || ||||| ||||  ||||||||| |||||    
T  21107214 ataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagtttctctta 21107143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 31339746 - 31339699
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    ||||||||||||||| ||||||| || |||||||||||||| ||||||    
T  31339746 ataatgttctatcatgtaccatatttcgatccaactcattaatctcta 31339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 40420275 - 40420343
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||||| |||||| | |||| |||||||||| |||||  || |||||||||||||| |||||    
T  40420275 taatgttctatcataaaccatattaggattcaactcattaatctct--attttttttaatagtttctctta 40420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 47372873 - 47372802
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||||||| ||  ||||||||||||| |||||  |||||| ||| |||||| |||||    
T  47372873 ataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctctta 47372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 53540512 - 53540441
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| ||   |||||||||||| |||| || |||||  |||||||||||||||    
T  53540512 ataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatctta 53540441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 21237085 - 21237015
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  21237085 acgccatagtgttctatcatataccaaatttggatccaactcattgacctctaaatcctttctaatggttt 21237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 41192283 - 41192229
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||||||||| ||||||||||| ||  ||||||||||||| |||||| ||||||    
T  41192283 ataatgttctaccatataccatatttctatccaactcattaatctctagatcttt 41192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 47147593 - 47147530
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||| ||||  |  ||||||||||||| |||||| |||||| ||||||||||    
T  47147593 ataatgttctatcatatatcatatct--atccaactcattaatctctagatctttcttaatagttt 47147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 28550521 - 28550586
Alignment:
Q  60 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||| | |||||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  28550521 ttctatcaaaaaccatatttggatcaaactcattaacctctaaatctttcctaatagtttctctta 28550586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 34233076 - 34233149
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    ||||||||| |||||||||||||| ||| || || |||| ||||||||| ||||||  ||||| | ||||||||    
T  34233076 attacgctacaatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatagttt 34233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 41729504 - 41729549
Alignment:
Q  48 tacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  41729504 tacgccatagtgttctatcataaaccatatttggatccaactcatt 41729549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 33225895 - 33225964
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  33225895 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 33225964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 44385052 - 44384988
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    |||||||||||||||| |||||| |   |||||||| |||| |||||| |||||| |||||||||    
T  44385052 ataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 418086 - 418148
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||||||| |||||||||||||    
T  418086 attacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatcttt 418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 9235269 - 9235197
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 126  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| |||||||||| ||||||    
T  9235269 ataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctcttag 9235197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13561388 - 13561511
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| || ||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||||||||||||||||||||      
T  13561388 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcattga 13561487  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  13561488 cctctaaatcttttctaatggttt 13561511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 14667993 - 14667922
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| |||||| ||| ||| || |||||    
T  14667993 ataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttctctta 14667922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 11675810 - 11675680
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagtt-ggatccaactcatta 94  Q
    ||||| ||||||||||||||  ||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| ||   |||||||||||||    
T  11675810 aacaacaaccaagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcatta 11675711  T
Q  95 ttctctaaatcttttttaatagtttatctta 125  Q
     ||||||||||| |  ||||||||| |||||    
T  11675710 atctctaaatctgtcctaatagtttctctta 11675680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 12576920 - 12576990
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    |||||| |||||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||||||||    
T  12576920 ataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagtttatctt 12576990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 38685241 - 38685124
Alignment:
Q  7 aaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctcta 101  Q
    |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||   |||||    
T  38685241 aaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctcta 38685142  T
Q  102 aatcttttttaatagttt 119  Q
    |||| ||| |||| ||||    
T  38685141 aatcctttctaatggttt 38685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 17340496 - 17340560
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    |||||||| ||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagtt 17340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2915498 - 2915620
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    |||||||||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||      
T  2915498 aacaataaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata-accaaatttggatccaactcattga 2915596  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||| ||| |||| ||||    
T  2915597 cctctaaatcctttctaatggttt 2915620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3302124 - 3302001
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||||| || | |||||||| |     |||  || |||||||||| | |||||| ||||||||||||||||      
T  3302124 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcattga 3302025  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  3302024 cctctaaatcttttataatggttt 3302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 6889223 - 6889144
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| |||||||||||||||| |||||| || |  |||||| |||| |||||||||||||  ||||||||| |||||    
T  6889223 attacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtttctctta 6889144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 14725736 - 14725669
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||| |||||| |||||| || ||||||||||||||  || |||||||||| |||||||||||||||    
T  14725736 tgttcgatcataaaccatattttgatccaactcattaacctttaaatcttttataatagtttatctta 14725669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 1287583 - 1287704
Alignment:
Q  3 caataaccaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaactcattattc 97  Q
    |||||||||||||||||| |||||||||||| || | |||||||     | |||| ||| ||| |||||||| |||| | ||||||||||||||||   |    
T  1287583 caataaccaagccttatcccactaagtggggtcggctacatggatcaactgacgccatagtgtactatcatacaccaaatttggatccaactcattgacc 1287682  T
Q  98 tctaaatcttttttaatagttt 119  Q
    |||||||| ||| |||| ||||    
T  1287683 tctaaatcctttctaatggttt 1287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18855887 - 18855798
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcc 85  Q
    ||||| ||||||| |||||| |||||||||||| || | ||||||||     || ||||||||||||||||||| |||||| ||||||||    
T  18855887 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatatttggatcc 18855798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 5303673 - 5303595
Alignment:
Q  49 acgctataatgttctatcatataccatag--ttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||| ||||| |||||||||||||||||   ||  |||||||||||||  |||||||||||||| |||||||| |||||    
T  5303673 acgccataatattctatcatataccatatatttctatccaactcattaaactctaaatctttttcaatagtttctctta 5303595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 5558415 - 5558324
Alignment:
Q  7 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    |||||||||||||| |||||||||||| || | ||||||||     || || ||| |||||||||||| |||||| |||||||| |||||||    
T  5558415 aaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactcatt 5558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 23980162 - 23980095
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||| |||||| || |||||||||||||| ||| |||||| || | |||||||| |||||    
T  23980162 tgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttctctta 23980095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 28186863 - 28186906
Alignment:
Q  82 atccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||    
T  28186863 atccaactcattaatctctaaatctttcttaatagtttctctta 28186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 41894277 - 41894234
Alignment:
Q  65 tcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||    
T  41894277 tcataaaccatatttggatccaactcattaatctctaaatcttt 41894234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32442128 - 32442225
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 94  Q
    |||||||||||||| ||||| |||||||||| | || | ||||||||     ||||| |||||||||||||  | |||||| |||||||||||||||||    
T  32442128 aacaataaccaagc-ttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatccaaaaccatatttggatccaactcatta 32442225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36551426 - 36551380
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat 47  Q
    ||||| ||||||||||||||||||||||||||| || | ||||||||    
T  36551426 aacaacaaccaagccttatctcactaagtggggtcggctacatggat 36551380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 43557893 - 43557947
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    |||||||||||||||| |||||| || ||||||||||| || |||| ||||||||    
T  43557893 ataatgttctatcataaaccatatttcgatccaactcaataatctccaaatcttt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 35615505 - 35615440
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||| || ||| ||  ||||||||||||| ||||||||| ||| | ||||||||    
T  35615505 ataatgttctatcataaactatatttttatccaactcattaatctctaaatttttatgaatagttt 35615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 36200934 - 36200874
Alignment:
Q  71 accatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 132  Q
    |||||| |||||||||||||||||  ||||| ||||||| ||||||||| || |||||||||    
T  36200934 accatatttggatccaactcattaacctctatatcttttataatagtttttc-taggtcttc 36200874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38132616 - 38132543
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcata 69  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||||||||||    
T  38132616 aacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcata 38132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9460830 - 9460862
Alignment:
Q  1 aacaataaccaagccttatctcactaagtgggg 33  Q
    ||||||||||||||||||||| |||||||||||    
T  9460830 aacaataaccaagccttatcttactaagtgggg 9460862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 9593768 - 9593839
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| | ||||||||||||||| ||||||| |||||  ||||||||| |||||    
T  9593768 ataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctctta 9593839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34507 - 34636
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| ||||||| |||||| |||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| ||  |||||||||||||     
T  34507 aacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaa 34606  T
Q  96 tctctaaatcttttttaatagtttatctta 125  Q
    ||| || |||||| ||||| |||| |||||    
T  34607 tctttagatctttcttaatggtttctctta 34636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12890855 - 12890758
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 93  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||| ||||||||    
T  12890855 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcatt 12890758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 31818753 - 31818682
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    |||||||||||||||| |||||| || |||||||||||||| |||| ||| ||||  ||||||||| |||||    
T  31818753 ataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagtttctctta 31818682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 5096064 - 5096002
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||||| |||||||||||||||| |||||| || ||||||||||||||  | ||||||||||    
T  5096064 attacgccataatgttctatcataaaccatattttgatccaactcattaaccactaaatcttt 5096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 24666033 - 24665963
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    |||||||||||||||| |||||| || |||||||||||||   |||||||| ||| |||||||||| ||||    
T  24666033 ataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctctt 24665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 14389213 - 14389286
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||  ||||||| ||||||| |||||| ||||||| |||| |||| ||||||||||||| |||| |||||    
T  14389213 attacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagttt 14389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 43119 - 43183
Alignment:
Q  61 tctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||| || ||| || |||||||||||||| |||||| |||||| |||||||||| |||||    
T  43119 tctatcataaactatattttgatccaactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 1748006 - 1748070
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||||||| ||| ||  ||||||||||||| ||||||||| ||| ||| ||||||    
T  1748006 taatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagttt 1748070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 5897679 - 5897615
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 118  Q
    ||||| ||||| ||||||||||| || |||||||| ||||| | |||||||||||| ||||||||    
T  5897679 ataatattctaccatataccatattttgatccaacacattaatatctaaatcttttctaatagtt 5897615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 8364786 - 8364707
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| |||||||||||||||| |||||  ||   ||||||| |||| | ||||||||||| |||||||||| |||||    
T  8364786 attacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctctta 8364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 6055832 - 6055902
Alignment:
Q  55 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||||||| ||| || ||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  6055832 taatgttctattatacactatatttggatctaactcattaacctctaaatctttcataatagtttctctta 6055902  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 30031535 - 30031413
Alignment:
Q  2 acaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattatt 96  Q
    |||| |||||||||||||| ||||||||| || || | ||||||     ||||||| ||| |||||||||||| |||||| ||  ||||||||||||       
T  30031535 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgac 30031436  T
Q  97 ctctaaatcttttttaatagttt 119  Q
    ||||||||| ||| |||| ||||    
T  30031435 ctctaaatcctttctaattgttt 30031413  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 32756148 - 32756078
Alignment:
Q  49 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||| ||| |||||||||||| |||| | ||||||||||||||||   ||||||||||||| |||| ||||    
T  32756148 acgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttctaatggttt 32756078  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 9568929 - 9568872
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 103  Q
    ||||||| |||| | ||||||||| |||||| |||||||||||||| || ||||||||    
T  9568929 attacgccataacggtctatcataaaccatatttggatccaactcaataatctctaaa 9568872  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 10098958 - 10099019
Alignment:
Q  58 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||| |||||| ||  ||||||||||||   |||||||||||||||||| ||||    
T  10098958 tgttctatcatacaccatatttaaatccaactcattgacctctaaatcttttttaatggttt 10099019  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 18238210 - 18238270
Alignment:
Q  60 ttctatcatataccatagttggatccaactcattattctctaaatcttt-tttaatagttt 119  Q
    |||||||||||| |||| ||  ||||||||||||| ||| ||||||||| |||||||||||    
T  18238210 ttctatcatatatcatatttttatccaactcattaatctgtaaatctttctttaatagttt 18238270  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20864867 - 20864835
Alignment:
Q  1 aacaataaccaagccttatctcactaagtgggg 33  Q
    ||||| |||||||||||||||||||||||||||    
T  20864867 aacaacaaccaagccttatctcactaagtgggg 20864835  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 31831920 - 31831984
Alignment:
Q  56 aatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagttt 119  Q
    |||||||||||||| | ||||  |||||||||||||| || |||||| |||||| ||||||||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagttt 31831984  T

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Target: scaffold0570 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 950 - 1073
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||| ||||| |  | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||      
T  950 aacaacaaccaagccttatcccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 1049  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     |||||||||||||||||| ||||    
T  1050 cctctaaatcttttttaatggttt 1073  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 17733 - 17690
Alignment:
Q  82 atccaactcattattctctaaatcttttttaatagtttatctta 125  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||    
T  17733 atccaacccattaatctctaaatcttttttaatagtttctctta 17690  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16858 - 16735
Alignment:
Q  1 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 95  Q
    ||||| |||||||||||||| |||||||||| | || | |||| ||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||      
T  16858 aacaacaaccaagccttatcccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 16759  T
Q  96 tctctaaatcttttttaatagttt 119  Q
     ||||||||||||| |||| ||||    
T  16758 cctctaaatcttttctaatggttt 16735  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 25503 - 25569
Alignment:
Q  54 ataatgttctatcatataccatagttggatccaactcattattctctaaatc-ttttttaatagttt 119  Q
    |||||||| ||||||||| | || ||  ||||||||||||| |||||||||| ||||||||||||||    
T  25503 ataatgttttatcatataacttatttctatccaactcattaatctctaaatcattttttaatagttt 25569  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 39549 - 39487
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 108  Q
    ||||||| || ||||||||||||| |||| | |||||||||||||||||   |||||||||||    
T  39549 attacgccatcatgttctatcataaaccacatttggatccaactcattaccatctaaatcttt 39487  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 160376 - 160454
Alignment:
Q  46 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 124  Q
    ||||||| |||||||||||||||| |||||| || | || ||||||||| | ||| |||||||  ||||||||| ||||    
T  160376 attacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttctctt 160454  T

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