View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1273_low_70 (Length: 217)
Name: NF1273_low_70
Description: NF1273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1273_low_70 |
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Alignment Details
Target: chr6 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3244081 - 3243952
Alignment:
| Q |
1 |
taaaacaaatttccccgtaatagctcaaataacaagacattgtgtaagttacaaaacatttcttacttttaagacataagtataatccttgtaacttaat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
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| T |
3244081 |
taaaacaaatttccccgtaatagctcaaataacaagacattgtgtaagttacaaatcatttcttacttttaagaca----tataatccttgtaacttaat |
3243986 |
T |
|
| Q |
101 |
gaatggacatctttgtcacttgataatatttttc |
134 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
3243985 |
gaatggacatctttgtcacttgataatatttttc |
3243952 |
T |
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