View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12740_high_10 (Length: 449)
Name: NF12740_high_10
Description: NF12740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12740_high_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 14 - 449
Target Start/End: Original strand, 36788181 - 36788616
Alignment:
| Q |
14 |
cagagagctggttgtgagataagatgatatctggcccgggctttttgaaagaaccgaatgattctggaattgggcctgtgagtttgtttctgtctaagtg |
113 |
Q |
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| T |
36788181 |
cagagagctggttgtgagataagatgatatctggcccaggctttttgaaagaaccgaatgattctggaattgggcctgtgagtttgtttctgtctaagtg |
36788280 |
T |
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| Q |
114 |
taaggactcaaggttaggtagctgtgaaagtgagcttgggatcgggcctgagaggttgttggtggaaaggtgaagaagctggaggtttttatgctgggcc |
213 |
Q |
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| T |
36788281 |
taaggactcaaggttaggtagctgtgaaagtgagcttgggatcgggcctgagaggttgttggtggaaaggtgaagaagctggaggtttttaagctgggcc |
36788380 |
T |
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| Q |
214 |
aagaaaggtggtatcgggcctgagacattggtgtattcaatgaaaagatacttgagtttcgtgagcttggcgatagtgggctggattgggcccgtgagcc |
313 |
Q |
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| T |
36788381 |
aagaaaggtggtatcgggcctgagacattggtgtattcaatgaaaagatacttgagtttcgtgagcttggcgatagtgggctggattgggcccttgagcc |
36788480 |
T |
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| Q |
314 |
tggggagtttgtggaattcgagattttcaagataagggaggtcaccgactgaagggggtatagggcctgagagatttgtgtctgggacggaggattgcat |
413 |
Q |
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| T |
36788481 |
tggggagtttgtggaattcgagattttcaagataagggaggtcaccgactgaagggggtatagtgcctgagagatttgtgtctgggacggaggattgcat |
36788580 |
T |
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| Q |
414 |
aatgagggcagtgatacggtgtgttataaggtcgca |
449 |
Q |
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| T |
36788581 |
aatgagggcagtgatacggtgtgttataaggtcgca |
36788616 |
T |
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