View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12740_high_42 (Length: 235)

Name: NF12740_high_42
Description: NF12740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12740_high_42
NF12740_high_42
[»] chr8 (40 HSPs)
chr8 (11-158)||(43275527-43275674)
chr8 (11-159)||(40918859-40919007)
chr8 (11-158)||(7146913-7147062)
chr8 (11-159)||(40058431-40058581)
chr8 (11-158)||(11174351-11174500)
chr8 (11-158)||(37345571-37345720)
chr8 (11-160)||(11646453-11646604)
chr8 (11-151)||(30999652-30999791)
chr8 (11-158)||(3585451-3585600)
chr8 (21-159)||(2540069-2540209)
chr8 (11-158)||(27034997-27035144)
chr8 (14-158)||(20546420-20546564)
chr8 (11-158)||(36068080-36068229)
chr8 (28-160)||(28562419-28562554)
chr8 (23-110)||(28326797-28326883)
chr8 (105-158)||(40486453-40486506)
chr8 (105-159)||(8697898-8697952)
chr8 (105-159)||(41307961-41308015)
chr8 (105-158)||(45278701-45278754)
chr8 (105-160)||(10646590-10646645)
chr8 (23-104)||(13881094-13881178)
chr8 (23-156)||(35866616-35866751)
chr8 (28-160)||(28567917-28568051)
chr8 (28-160)||(28575510-28575644)
chr8 (54-104)||(26629182-26629232)
chr8 (28-99)||(10181002-10181074)
chr8 (23-108)||(30906828-30906917)
chr8 (21-63)||(37510363-37510405)
chr8 (117-159)||(41305761-41305803)
chr8 (130-159)||(616782-616811)
chr8 (130-159)||(617017-617046)
chr8 (130-159)||(623175-623204)
chr8 (130-159)||(623410-623439)
chr8 (133-162)||(18044663-18044692)
chr8 (31-107)||(27563999-27564075)
chr8 (130-159)||(40494618-40494647)
chr8 (130-159)||(42587482-42587511)
chr8 (130-158)||(132017-132045)
chr8 (126-158)||(5878317-5878349)
chr8 (130-158)||(14237514-14237542)
[»] chr2 (27 HSPs)
chr2 (12-158)||(1102503-1102651)
chr2 (11-158)||(39938170-39938319)
chr2 (11-157)||(23366790-23366938)
chr2 (11-159)||(3518907-3519056)
chr2 (11-161)||(12969868-12970019)
chr2 (33-158)||(37673887-37674014)
chr2 (11-130)||(1646317-1646436)
chr2 (105-158)||(34224378-34224431)
chr2 (12-81)||(22388265-22388335)
chr2 (33-158)||(39562037-39562162)
chr2 (23-110)||(19976380-19976468)
chr2 (73-148)||(1002922-1002997)
chr2 (38-110)||(35179090-35179164)
chr2 (23-110)||(18078104-18078193)
chr2 (23-107)||(32840312-32840401)
chr2 (28-95)||(34242040-34242107)
chr2 (23-105)||(14779832-14779914)
chr2 (130-160)||(39358144-39358174)
chr2 (130-159)||(2183191-2183220)
chr2 (130-159)||(5405230-5405259)
chr2 (130-159)||(7608283-7608312)
chr2 (130-159)||(19141065-19141094)
chr2 (130-159)||(19141300-19141329)
chr2 (23-83)||(4917839-4917899)
chr2 (130-158)||(8042256-8042284)
chr2 (130-158)||(11841593-11841621)
chr2 (130-158)||(44365391-44365419)
[»] chr4 (42 HSPs)
chr4 (11-159)||(21661663-21661813)
chr4 (12-159)||(40122614-40122763)
chr4 (11-159)||(21670427-21670577)
chr4 (11-166)||(25704643-25704800)
chr4 (11-159)||(24706375-24706525)
chr4 (11-162)||(14261040-14261193)
chr4 (11-159)||(44568836-44568986)
chr4 (11-161)||(12071558-12071709)
chr4 (21-159)||(21310424-21310564)
chr4 (11-160)||(22321396-22321546)
chr4 (11-158)||(34324711-34324860)
chr4 (21-156)||(31892240-31892373)
chr4 (11-158)||(20249142-20249289)
chr4 (12-151)||(50767871-50768012)
chr4 (44-159)||(1988035-1988151)
chr4 (23-110)||(20714488-20714577)
chr4 (31-158)||(26676714-26676843)
chr4 (21-86)||(21064834-21064899)
chr4 (28-159)||(6129093-6129226)
chr4 (23-107)||(32543532-32543617)
chr4 (23-159)||(19692722-19692860)
chr4 (23-159)||(19703307-19703445)
chr4 (105-143)||(19361662-19361700)
chr4 (157-191)||(25273305-25273339)
chr4 (73-110)||(48652268-48652305)
chr4 (23-92)||(51777687-51777755)
chr4 (130-159)||(26170221-26170250)
chr4 (130-159)||(35381128-35381157)
chr4 (130-159)||(38416884-38416913)
chr4 (130-159)||(47386520-47386549)
chr4 (130-158)||(2760730-2760758)
chr4 (130-158)||(2760961-2760989)
chr4 (130-158)||(4467520-4467548)
chr4 (130-158)||(19433358-19433386)
chr4 (130-158)||(26169986-26170014)
chr4 (130-158)||(29830343-29830371)
chr4 (132-160)||(29830579-29830607)
chr4 (130-158)||(38416650-38416678)
chr4 (130-158)||(44232077-44232105)
chr4 (130-158)||(45292066-45292094)
chr4 (130-158)||(55209574-55209602)
chr4 (130-158)||(55209808-55209836)
[»] chr3 (42 HSPs)
chr3 (11-158)||(36881282-36881429)
chr3 (11-159)||(3383075-3383225)
chr3 (11-159)||(13364842-13364992)
chr3 (21-161)||(29375135-29375277)
chr3 (11-158)||(198855-199004)
chr3 (11-165)||(19241796-19241952)
chr3 (11-158)||(23088059-23088208)
chr3 (11-158)||(46694238-46694387)
chr3 (11-159)||(43750136-43750285)
chr3 (63-160)||(32835138-32835235)
chr3 (39-160)||(13702767-13702890)
chr3 (80-158)||(27707363-27707441)
chr3 (32-108)||(44522491-44522567)
chr3 (56-159)||(37293436-37293539)
chr3 (105-159)||(12094581-12094635)
chr3 (28-107)||(37780988-37781069)
chr3 (105-159)||(44277455-44277509)
chr3 (105-158)||(19911509-19911562)
chr3 (14-67)||(27707119-27707172)
chr3 (105-158)||(38805245-38805298)
chr3 (87-159)||(48963155-48963225)
chr3 (32-107)||(1455297-1455374)
chr3 (23-106)||(19897067-19897152)
chr3 (11-110)||(26105079-26105180)
chr3 (23-151)||(53559750-53559880)
chr3 (117-159)||(19912174-19912216)
chr3 (117-159)||(38806341-38806383)
chr3 (73-141)||(48820444-48820512)
chr3 (130-161)||(42490430-42490461)
chr3 (120-158)||(18355868-18355906)
chr3 (23-69)||(24064315-24064361)
chr3 (117-158)||(12095423-12095464)
chr3 (130-159)||(27010473-27010502)
chr3 (130-159)||(27010708-27010737)
chr3 (117-158)||(44276775-44276816)
chr3 (105-149)||(4226716-4226759)
chr3 (130-158)||(6910568-6910596)
chr3 (130-158)||(13499569-13499597)
chr3 (130-158)||(19823900-19823928)
chr3 (130-158)||(20765430-20765458)
chr3 (130-158)||(42761483-42761511)
chr3 (130-158)||(42761717-42761745)
[»] chr6 (33 HSPs)
chr6 (11-158)||(8626482-8626631)
chr6 (11-159)||(29260191-29260341)
chr6 (21-159)||(7761300-7761438)
chr6 (11-159)||(1605578-1605727)
chr6 (11-151)||(30734611-30734753)
chr6 (11-161)||(13757205-13757356)
chr6 (44-152)||(30734771-30734879)
chr6 (11-159)||(15064823-15064972)
chr6 (12-159)||(17942442-17942593)
chr6 (12-143)||(31559865-31559998)
chr6 (11-158)||(4129435-4129576)
chr6 (21-158)||(8235624-8235763)
chr6 (23-161)||(14286986-14287125)
chr6 (105-159)||(19996715-19996769)
chr6 (23-108)||(26860819-26860902)
chr6 (23-107)||(21277574-21277659)
chr6 (28-107)||(11370630-11370711)
chr6 (47-103)||(33845449-33845505)
chr6 (30-110)||(3798151-3798233)
chr6 (117-159)||(19996321-19996363)
chr6 (73-159)||(1814594-1814680)
chr6 (130-159)||(4147930-4147959)
chr6 (130-159)||(18668687-18668716)
chr6 (130-159)||(18668922-18668951)
chr6 (130-159)||(19087957-19087986)
chr6 (130-159)||(19088192-19088221)
chr6 (130-159)||(20437016-20437045)
chr6 (130-159)||(24623940-24623969)
chr6 (130-159)||(32414913-32414942)
chr6 (130-159)||(32420754-32420783)
chr6 (130-159)||(32671815-32671844)
chr6 (130-158)||(22055006-22055034)
chr6 (130-158)||(25476042-25476070)
[»] chr1 (49 HSPs)
chr1 (11-162)||(40783785-40783938)
chr1 (11-158)||(47037980-47038127)
chr1 (11-158)||(23045407-23045556)
chr1 (11-158)||(284333-284482)
chr1 (21-158)||(24772043-24772182)
chr1 (11-158)||(321626-321775)
chr1 (21-157)||(27211102-27211240)
chr1 (21-151)||(46771644-46771776)
chr1 (21-159)||(23526239-23526379)
chr1 (12-143)||(52037252-52037382)
chr1 (21-138)||(33082765-33082884)
chr1 (12-151)||(1749314-1749455)
chr1 (32-107)||(1837978-1838053)
chr1 (23-110)||(52478016-52478103)
chr1 (105-159)||(3943059-3943113)
chr1 (105-159)||(9588669-9588723)
chr1 (105-158)||(13984991-13985044)
chr1 (105-158)||(41959078-41959131)
chr1 (23-110)||(31003926-31004012)
chr1 (31-158)||(40261419-40261549)
chr1 (23-158)||(51064893-51065033)
chr1 (19-99)||(7765072-7765154)
chr1 (23-110)||(34458863-34458950)
chr1 (38-110)||(3657125-3657199)
chr1 (117-159)||(44227847-44227889)
chr1 (105-159)||(44228228-44228282)
chr1 (105-150)||(1168369-1168414)
chr1 (23-104)||(18396749-18396832)
chr1 (31-159)||(25929113-25929241)
chr1 (35-98)||(40562733-40562797)
chr1 (23-108)||(27143151-27143239)
chr1 (117-159)||(41959809-41959851)
chr1 (117-158)||(3943763-3943804)
chr1 (23-87)||(24876636-24876699)
chr1 (92-144)||(40564241-40564293)
chr1 (117-160)||(9589631-9589674)
chr1 (120-159)||(23526478-23526517)
chr1 (130-161)||(30701715-30701746)
chr1 (23-87)||(31061594-31061659)
chr1 (126-160)||(10845479-10845513)
chr1 (130-159)||(6402644-6402673)
chr1 (130-159)||(11641066-11641095)
chr1 (130-159)||(36399332-36399361)
chr1 (130-159)||(36757485-36757514)
chr1 (23-68)||(37926900-37926945)
chr1 (130-159)||(40771771-40771800)
chr1 (130-159)||(40772006-40772035)
chr1 (130-158)||(16120674-16120702)
chr1 (130-158)||(52024260-52024288)
[»] chr7 (33 HSPs)
chr7 (11-156)||(36453252-36453399)
chr7 (11-159)||(27813810-27813960)
chr7 (11-159)||(10981507-10981657)
chr7 (11-158)||(40348960-40349109)
chr7 (11-158)||(25614481-25614628)
chr7 (21-158)||(47110451-47110588)
chr7 (31-104)||(16360438-16360511)
chr7 (23-108)||(16662146-16662231)
chr7 (23-108)||(17636506-17636591)
chr7 (28-110)||(3091565-3091649)
chr7 (105-159)||(25060133-25060187)
chr7 (23-135)||(37983179-37983289)
chr7 (28-110)||(7743542-7743625)
chr7 (105-159)||(2911548-2911602)
chr7 (21-98)||(27942177-27942256)
chr7 (12-110)||(3498884-3498983)
chr7 (117-159)||(2910858-2910900)
chr7 (130-161)||(38852081-38852112)
chr7 (74-152)||(8379948-8380026)
chr7 (130-160)||(41897986-41898016)
chr7 (130-159)||(16778504-16778533)
chr7 (130-159)||(25566547-25566576)
chr7 (130-159)||(28061514-28061543)
chr7 (130-159)||(28061749-28061778)
chr7 (130-159)||(41898222-41898251)
chr7 (130-159)||(47156261-47156290)
chr7 (130-158)||(20885103-20885131)
chr7 (130-158)||(36623308-36623336)
chr7 (130-158)||(36623542-36623570)
chr7 (130-158)||(42877386-42877414)
chr7 (130-158)||(46103370-46103398)
chr7 (130-158)||(46103597-46103625)
chr7 (130-158)||(47156027-47156055)
[»] chr5 (26 HSPs)
chr5 (21-158)||(25773649-25773788)
chr5 (11-158)||(12806981-12807130)
chr5 (11-158)||(30720620-30720769)
chr5 (11-158)||(40886738-40886887)
chr5 (11-159)||(10285185-10285335)
chr5 (11-158)||(36561227-36561376)
chr5 (21-159)||(37900762-37900902)
chr5 (21-147)||(7277560-7277688)
chr5 (12-161)||(16983255-16983407)
chr5 (11-120)||(25683357-25683467)
chr5 (23-155)||(734478-734611)
chr5 (35-159)||(23098386-23098504)
chr5 (23-159)||(39070882-39071020)
chr5 (109-158)||(15305216-15305265)
chr5 (23-107)||(16054165-16054249)
chr5 (23-110)||(30403101-30403191)
chr5 (23-159)||(11319558-11319696)
chr5 (73-159)||(11796450-11796536)
chr5 (117-159)||(15304821-15304863)
chr5 (23-107)||(1056422-1056507)
chr5 (130-159)||(8086264-8086293)
chr5 (130-159)||(9502626-9502655)
chr5 (130-158)||(978077-978105)
chr5 (130-158)||(978311-978339)
chr5 (130-158)||(14634157-14634185)
chr5 (130-158)||(33387453-33387481)
[»] scaffold1431 (1 HSPs)
scaffold1431 (11-159)||(27-177)
[»] scaffold0054 (1 HSPs)
scaffold0054 (21-160)||(45452-45593)
[»] scaffold1770 (1 HSPs)
scaffold1770 (11-158)||(170-311)
[»] scaffold0062 (1 HSPs)
scaffold0062 (12-143)||(394-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (23-108)||(70874-70961)
[»] scaffold0257 (2 HSPs)
scaffold0257 (105-158)||(23467-23520)
scaffold0257 (117-158)||(23872-23913)
[»] scaffold0025 (1 HSPs)
scaffold0025 (21-92)||(65301-65375)
[»] scaffold0076 (1 HSPs)
scaffold0076 (28-62)||(15465-15499)
[»] scaffold0022 (1 HSPs)
scaffold0022 (130-158)||(100647-100675)


Alignment Details
Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 43275527 - 43275674
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  43275527 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 43275626  T
Q  111 tactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||    
T  43275627 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 43275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 40918859 - 40919007
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||    
T  40918859 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatgttttcataaaaaataacaaaatttatttggtttcttggt 40918958  T
Q  111 tactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||    
T  40918959 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagtat 40919007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 7147062 - 7146913
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  7147062 gagagagaaaaaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 7146963  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7146962 gttactgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 40058431 - 40058581
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  40058431 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 40058530  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  40058531 gttagtgcaatttctccgaaatggacatgtattttgaaacggagggagtat 40058581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 11174351 - 11174500
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  11174351 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 11174450  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  11174451 gttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 37345720 - 37345571
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| |||||||    
T  37345720 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttg 37345621  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  37345620 gttggtgcaatttcttcaaaatggacatgtattttgaaacggagggagta 37345571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 11646453 - 11646604
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  11646453 gagagagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttg 11646552  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatc 160  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  11646553 gttagtgcaatttctccaaaatggacatgtattttgaaacgaagggagtatc 11646604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 30999652 - 30999791
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  30999652 gagagagaa-aaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 30999750  T
Q  111 tactgcaatttcttcaaaatggacatgtattttgaaacgga 151  Q
    || |||||||||| |||||| ||||||||||||||||||||    
T  30999751 tagtgcaatttctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 3585600 - 3585451
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  3585600 gagagaggaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttg 3585501  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  3585500 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 2540069 - 2540209
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  2540069 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 2540168  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  2540169 tttctccaaaatggacatgtattttgaaacggaggaagtat 2540209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 27035144 - 27034997
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaa-acacacatattttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||| ||||||| ||||||||    
T  27035144 gagagagaa-aaaatagaatgaaataataaatggttaagggtattatagaaacacagacataatttcatcaaaaataaaaaaaattatttggtttcttgg 27035046  T
Q  110 ttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27035045 ttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 27034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 20546420 - 20546564
Alignment:
Q  14 agagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttac 113  Q
    |||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||| |||||||| ||      
T  20546420 agagaaaaaaatataatgaaataataaattgttaagggtatcatataaaacacacataatttcatcaaaaataacaaaatttatttaatttcttgattgt 20546519  T
Q  114 tgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  20546520 tgcaatttcttcaaaatggacatatattttgaaatggagggagta 20546564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 36068229 - 36068080
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||  |||||| |||||||| |||||||||||| ||| |||    
T  36068229 gagagagaaaaaagtaaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttg 36068130  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| | ||||| || ||||||||||||||||||||||||||||||||||    
T  36068129 gttagtacaattcctccaaaatggacatgtattttgaaacggagggagta 36068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 28562554 - 28562419
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaaa---cacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctt 124  Q
    |||||||| |||||||  ||||||||||||||||||   |||| | | ||||||||||||| | || |||||||||||| ||||||   || ||||||||    
T  28562554 aatgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctt 28562455  T
Q  125 caaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||||||||| ||||||||||||||||| ||||||    
T  28562454 caaaatggacaagtattttgaaacggaggaagtatc 28562419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 28326797 - 28326883
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| ||||||||||||||| |||||| ||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  28326797 aatagaatgaaataataaatagttaagagtattattgaaaa-acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 40486453 - 40486506
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 40486506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 8697898 - 8697952
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 8697952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 41307961 - 41308015
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 41308015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 45278701 - 45278754
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 45278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 10646645 - 10646590
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggaagtatc 10646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 13881094 - 13881178
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag---aaaacacacatattttcatcaaaaataataaaatttatttgattt 104  Q
    |||| |||||||||||||||| |||||||||||||||   ||||| |||| | ||||||||||||||| ||||||||||||||||    
T  13881094 aatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttgattt 13881178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 35866751 - 35866616
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||| ||| |||||||||||| |||||||||||||||  |||||||| | | |||||| |||||||| || |||||| | ||||||||||   |  ||||    
T  35866751 aatagaataaaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatt 35866652  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggag 156  Q
    |||| |||||||||| ||||| ||||||||| ||||    
T  35866651 tctttaaaatggacaagtattgtgaaacggaaggag 35866616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 28568051 - 28567917
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaa---acacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctt 124  Q
    ||||||||||||||| |   |||||||||||||||   ||||| | | |||||| |||||| | || ||||||||||||  |||||   || ||||||||    
T  28568051 aatgaaataataaat-gagcagggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28567953  T
Q  125 caaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||||||||| ||||||||||||||||| ||||||    
T  28567952 caaaatggacaagtattttgaaacggaggaagtatc 28567917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 28575644 - 28575510
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaa---acacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctt 124  Q
    ||||||||||||||| |   |||||||||||||||   ||||| | | |||||| |||||| | || ||||||||||||  |||||   || ||||||||    
T  28575644 aatgaaataataaat-gagcagggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28575546  T
Q  125 caaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||||||||| ||||||||||||||||| ||||||    
T  28575545 caaaatggacaagtattttgaaacggaggaagtatc 28575510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 26629182 - 26629232
Alignment:
Q  54 ttatagaaaacacacatattttcatcaaaaataataaaatttatttgattt 104  Q
    |||||||||| ||||||| |||||||||| |||| ||||||||||||||||    
T  26629182 ttatagaaaaaacacataatttcatcaaacataacaaaatttatttgattt 26629232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 10181002 - 10181074
Alignment:
Q  28 aatgaaataataaatggttaagggtattat-agaaaacacacatattttcatcaaaaataataaaatttattt 99  Q
    ||||||||||||||||||||| |||||||| | |||||| || || ||| || |||||||| |||||||||||    
T  10181002 aatgaaataataaatggttaacggtattataaaaaaacaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 30906828 - 30906917
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaaca----cacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||| ||| ||||||||||||||||||| | | |||||||| |    |||| | |||||| |||||||| ||||||||||||||||||||    
T  30906828 aatagaattaaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaatttatttgatttcttg 30906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 37510405 - 37510363
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaa 63  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  37510405 aaaataaaatgaaatattaaatgattaagggtattattgaaaa 37510363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 41305803 - 41305761
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||  ||||||||||||||||||||||||||| ||||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagtat 41305761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 616811 - 616782
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  616811 tggacatgtattttgaaacggagggagtat 616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 617017 - 617046
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  617017 tggacatgtattttgaaacggagggagtat 617046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 623204 - 623175
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  623204 tggacatgtattttgaaacggagggagtat 623175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 623410 - 623439
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  623410 tggacatgtattttgaaacggagggagtat 623439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 18044663 - 18044692
Alignment:
Q  133 acatgtattttgaaacggagggagtatcaa 162  Q
    ||||||||||||||||||||||||||||||    
T  18044663 acatgtattttgaaacggagggagtatcaa 18044692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 27563999 - 27564075
Alignment:
Q  31 gaaataataaatggttaagggtattat-agaaaacacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||||||||||| ||||||||| |||| | |||| ||||||| | |||| |||||||| |||| ||||||||||||||    
T  27563999 gaaataataaattgttaagggtgttataaaaaaaaacacataatctcat-aaaaataacaaaaattatttgatttctt 27564075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 40494618 - 40494647
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  40494618 tggacatgtattttgaaacggagggagtat 40494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 42587482 - 42587511
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  42587482 tggacatgtattttgaaacggagggagtat 42587511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 132045 - 132017
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  132045 tggacatgtattttgaaacggagggagta 132017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 5878349 - 5878317
Alignment:
Q  126 aaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||| |||||||||||||||    
T  5878349 aaaatggacatgtatttggaaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 14237514 - 14237542
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  14237514 tggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 1102651 - 1102503
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  1102651 agagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgg 1102552  T
Q  110 ttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1102551 ttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 39938319 - 39938170
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  39938319 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 39938220  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  39938219 gttagtgcaatttctccaaaatggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 23366938 - 23366790
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| |||||||    
T  23366938 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttg 23366839  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagt 157  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  23366838 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 3519056 - 3518907
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  3519056 gagagagaa-aaaataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 3518958  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  3518957 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtat 3518907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 12969868 - 12970019
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaaca--cacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |  |||||| ||||||||||||||| |||||||||||| |||||||    
T  12969868 gagagagaa-aaaatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttg 12969966  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatca 161  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12969967 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtatca 12970019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 37673887 - 37674014
Alignment:
Q  33 aataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaat 130  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  131 ggacatgtattttgaaacggagggagta 158  Q
    | ||||||||||||||||||||||||||    
T  37673987 gaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 1646436 - 1646317
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  1646436 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttatttagtttcttggt 1646337  T
Q  111 tactgcaatttcttcaaaat 130  Q
    | ||||||||||| ||||||    
T  1646336 tgctgcaatttctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 22388265 - 22388335
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaa--acacacatattttcatcaa 81  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  22388265 agagagaa-aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 39562037 - 39562162
Alignment:
Q  33 aataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatgg 132  Q
    |||||||||||||||||||||||| | |||||| | ||| |||| |||||||||| |||||||||||||||| ||| |   || |||||| | ||||  |    
T  39562037 aataataaatggttaagggtattagaaaaaacaaaaataatttcttcaaaaataacaaaatttatttgattttttgatatgtgtaatttccttaaaagcg 39562136  T
Q  133 acatgtattttgaaacggagggagta 158  Q
    ||| ||||  ||||||||||||||||    
T  39562137 acaagtatcatgaaacggagggagta 39562162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 19976468 - 19976380
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaaca-cacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| ||| ||||||||||| | |||||||||||||||||| | |||||| ||| ||||||| ||  ||||||||||||||||||||||    
T  19976468 aatataataaaataataaataggtaagggtattatagaaaaaaacacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 1002922 - 1002997
Alignment:
Q  73 tttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaac 148  Q
    ||||||||||||||||||||||||||||||||||| ||   || ||| || ||||||  |||||||||||||||||    
T  1002922 tttcatcaaaaataataaaatttatttgatttcttagtatgtgtaatatcctcaaaagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 35179090 - 35179164
Alignment:
Q  38 taaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||| ||||||| ||||||||||||  |||||| | ||||||||||||||| ||||||||||| ||||||||||    
T  35179090 taaatagttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 18078193 - 18078104
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| |||||| ||||||||||| ||| |||||||||||||  |||| | |  |||||||||||||| |||||||||||||||| |||||    
T  18078193 aatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 32840312 - 32840401
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaa-----acacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||| ||||||||||||||| | ||| |||||||||||||     | ||||| | ||||||||||||||| |||||||||||||||||||    
T  32840312 aatagaatgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 34242107 - 34242040
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaattt 95  Q
    ||||||||||||||||| ||||||| ||| | |||| ||||| | ||||||||||||||| |||||||    
T  34242107 aatgaaataataaatgggtaagggtgttacaaaaaaaacacagaatttcatcaaaaataacaaaattt 34242040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 14779914 - 14779832
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttc 105  Q
    |||| ||||||||||||||||  ||||  |||||||||||| ||||| ||  ||||||||||||||| ||||||||||| |||||    
T  14779914 aatataatgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttatttaatttc 14779832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 39358174 - 39358144
Alignment:
Q  130 tggacatgtattttgaaacggagggagtatc 160  Q
    |||||||||||||||||||||||||||||||    
T  39358174 tggacatgtattttgaaacggagggagtatc 39358144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 2183191 - 2183220
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  2183191 tggacatgtattttgaaacggagggagtat 2183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 5405230 - 5405259
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  5405230 tggacatgtattttgaaacggagggagtat 5405259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 7608283 - 7608312
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  7608283 tggacatgtattttgaaacggagggagtat 7608312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 19141094 - 19141065
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  19141094 tggacatgtattttgaaacggagggagtat 19141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 19141300 - 19141329
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  19141300 tggacatgtattttgaaacggagggagtat 19141329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 4917899 - 4917839
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaa 83  Q
    |||| |||||||||||||||  |||||  |||||||||||| ||||||| ||| |||||||    
T  4917899 aatagaatgaaataataaataattaagattattatagaaaaaacacataattttatcaaaa 4917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 8042256 - 8042284
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  8042256 tggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 11841621 - 11841593
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  11841621 tggacatgtattttgaaacggagggagta 11841593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 44365391 - 44365419
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  44365391 tggacatgtattttgaaacggagggagta 44365419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 21661663 - 21661813
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  21661663 gagagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttg 21661762  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  21661763 gttactgcaatttctccaaaatggacatgtattttgaaagggagggagtat 21661813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 40122614 - 40122763
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| ||| ||||    
T  40122614 agagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttgg 40122713  T
Q  110 ttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40122714 ttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 40122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 21670427 - 21670577
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  21670427 gagagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttg 21670526  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  21670527 gttactgcaatttctccaaaatggacatgtattttgaaagggagggagtat 21670577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 25704800 - 25704643
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  25704800 gagagaaaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 25704701  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatcaacaaa 166  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  25704700 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtatctacaaa 25704643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 24706375 - 24706525
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  24706375 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 24706474  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  24706475 gttagtgcaatttctccaaaatggacatgtattttgaaacggatggagtat 24706525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 14261193 - 14261040
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||  |||||| ||||||||||| |||||||||||| |||||||    
T  14261193 gagagagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 14261094  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatcaa 162  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14261093 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtatcaa 14261040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 44568986 - 44568836
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| ||| |||    
T  44568986 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttg 44568887  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  44568886 gttagtgcaatttcttcaaaatggacatgtattttgaaacggaaggagtat 44568836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 12071709 - 12071558
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||  ||| |||    
T  12071709 gagagagaa-aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattg 12071611  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatca 161  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12071610 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtatca 12071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 21310564 - 21310424
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  21310564 aaaaaaaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 21310465  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  21310464 tttctccaaaatggacatgtattttgaaacggagggagtat 21310424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 22321396 - 22321546
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||| |||||||    
T  22321396 gagagagaa-aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttg 22321494  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatc 160  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  22321495 gttagtgcaatttctccaaaatggacatgtattttgaaacggaaggagtatc 22321546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 34324711 - 34324860
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttga-tttctt 107  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||| || | ||||||    
T  34324711 gagagagaa-aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttctt 34324809  T
Q  108 ggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  34324810 ggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 31892373 - 31892240
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31892373 aaaatagaatgaaataataaatggtcaaaggtattatagaaaacaca--taatttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 31892276  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggag 156  Q
    |||| |||||| ||||||||||||| ||||||||||    
T  31892275 tctttaaaatgaacatgtattttgatacggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 20249142 - 20249289
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaa-acacacatattttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||||||||| ||||||||    
T  20249142 gagagagaa-aaaatagaataaaataataaatggttaagggtattatagaaacacacacataatttcttcaaaaataacaaaatttatttggtttcttgg 20249240  T
Q  110 ttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||| | |||||| | |||||||||||||||||||||||||||| |||||    
T  20249241 ttaatacaatttatccaaaatggacatgtattttgaaacggagagagta 20249289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 50768012 - 50767871
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||     
T  50768012 agagagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttga 50767913  T
Q  110 ttactgcaatttcttcaaaatggacatgtattttgaaacgga 151  Q
    ||| ||||||||||  |||||| | |||||||||||||||||    
T  50767912 ttagtgcaatttctctaaaatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 1988151 - 1988035
Alignment:
Q  44 gttaagggtattatagaaaacaca--catattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtatt 141  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||||| ||||    
T  1988151 gttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttc-tccaaatagacatatatt 1988053  T
Q  142 ttgaaacggagggagtat 159  Q
    || |||| || |||||||    
T  1988052 ttaaaacagatggagtat 1988035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 20714488 - 20714577
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaa---cacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| ||||||||||||||||||||||| ||||||||||||   |||||||| ||||||||||||||| |||||||||||||||| |||||    
T  20714488 aatataatgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 26676714 - 26676843
Alignment:
Q  31 gaaataataaatggttaagggtattatagaaaacacac--atattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaa 128  Q
    |||||||||||||  |||||||||||||||||| ||||  | | |||||| |||||| | || |||||||||||| ||||||   || ||||||||||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  129 atggacatgtattttgaaacggagggagta 158  Q
    ||||| | ||||| |||||||||| |||||    
T  26676814 atggataagtattgtgaaacggagagagta 26676843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 21064899 - 21064834
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaata 86  Q
    |||||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||    
T  21064899 aaaatagaatgaaataataaatagttaagagtattataaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 6129093 - 6129226
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttc 125  Q
    |||||||||||||||| ||||||||||| ||||||| | ||| |   ||| ||||||||||| |||||||||||||||||||| |   || |||||| ||    
T  6129093 aatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcatc 6129192  T
Q  126 aaaatggacatgtattttgaaacggagggagtat 159  Q
    |||   || | ||||| |||||||||||||||||    
T  6129193 aaaggcgataagtattatgaaacggagggagtat 6129226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 32543617 - 32543532
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattat-agaaaacacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||| | | ||||||||||| ||| |||| ||||||| ||||||    
T  32543617 aataaaatgaaataataaatgattaagggtattataaaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 19692860 - 19692722
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||| ||||||||||||||||  ||||| ||||||||  |||||||| | | |||||| |||||| | || |||||||||||||||||||   |  ||||    
T  19692860 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19692761  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||| |  |||| |||||| |||| |||||    
T  19692760 tcttcaaaatggagaattattgtgaaacagaggaagtat 19692722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 19703445 - 19703307
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||| ||||||||||||||||  ||||| ||||||||  |||||||| | | |||||| |||||| | || |||||||||||||||||||   |  ||||    
T  19703445 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19703346  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||| |  |||| |||||| |||| |||||    
T  19703345 tcttcaaaatggagaattattgtgaaacagaggaagtat 19703307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtatttt 143  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 25273339 - 25273305
Alignment:
Q  157 tatcaacaaatgagattgataagcattatgtcgaa 191  Q
    |||||||||||||||||||||||||||||||||||    
T  25273339 tatcaacaaatgagattgataagcattatgtcgaa 25273305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 48652305 - 48652268
Alignment:
Q  73 tttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  48652305 tttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 51777755 - 51777687
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaa 92  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||| | ||| ||||||| ||| ||||    
T  51777755 aataacatgaaataataaatggttaagagtattatagaaaa-acacagaattttatcaaaattaaaaaaa 51777687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 26170221 - 26170250
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  26170221 tggacatgtattttgaaacggagggagtat 26170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 35381128 - 35381157
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  35381128 tggacatgtattttgaaacggagggagtat 35381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 38416884 - 38416913
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  38416884 tggacatgtattttgaaacggagggagtat 38416913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 47386520 - 47386549
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  47386520 tggacatgtattttgaaacggagggagtat 47386549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 2760758 - 2760730
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  2760758 tggacatgtattttgaaacggagggagta 2760730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 2760961 - 2760989
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  2760961 tggacatgtattttgaaacggagggagta 2760989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 4467548 - 4467520
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  4467548 tggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 19433386 - 19433358
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  19433386 tggacatgtattttgaaacggagggagta 19433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 26170014 - 26169986
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  26170014 tggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 29830371 - 29830343
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  29830371 tggacatgtattttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 29830579 - 29830607
Alignment:
Q  132 gacatgtattttgaaacggagggagtatc 160  Q
    |||||||||||||||||||||||||||||    
T  29830579 gacatgtattttgaaacggagggagtatc 29830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 38416678 - 38416650
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  38416678 tggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 44232105 - 44232077
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  44232105 tggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 45292066 - 45292094
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  45292066 tggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 55209602 - 55209574
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  55209602 tggacatgtattttgaaacggagggagta 55209574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 55209808 - 55209836
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  55209808 tggacatgtattttgaaacggagggagta 55209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 36881429 - 36881282
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  36881429 gagagagaaaaaaataaaatgaaataataaataattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 36881330  T
Q  111 tactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||    
T  36881329 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 36881282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 3383225 - 3383075
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  3383225 gagagagaaaaaaataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 3383126  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  3383125 gttactgcaatttctccaaaatggacatatattttgaaacggaaggagtat 3383075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 13364992 - 13364842
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  13364992 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 13364893  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  13364892 gttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagtat 13364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 29375277 - 29375135
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29375277 aaaaaaaaaagaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaa 29375178  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagtatca 161  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  29375177 tttctccaaaatggacatgtattttgaaacggagggagtatca 29375135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 199004 - 198855
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  199004 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttg 198905  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    || | |||||||||| ||||||||||||||||||||||||||||||||||    
T  198904 gtcagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 19241796 - 19241952
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  19241796 gagagagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttg 19241895  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatcaacaa 165  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  19241896 gttagtgcaatttcaccaaaatggacatgtattttgaaacggagggagtatgaacaa 19241952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 23088059 - 23088208
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  23088059 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 23088158  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| ||||||||||||||||| ||||| ||||||||||| |||||||||    
T  23088159 gttagtgcaatttcttcaaaatagacatatattttgaaacagagggagta 23088208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 46694238 - 46694387
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  46694238 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 46694337  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
     ||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  46694338 attagtgcaatttctccaaaaaggacatgtattttgaaacggagggagta 46694387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 43750285 - 43750136
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  43750285 gagagagaa-aaaatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttg 43750187  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  43750186 gttactccaatttctccaaaatggacatgtattttgaaacgaagggagtat 43750136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 32835138 - 32835235
Alignment:
Q  63 acacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||    
T  32835138 acacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacggattgagtatc 32835235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 13702890 - 13702767
Alignment:
Q  39 aaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacat 136  Q
    |||||||||| |||||||||||||||| ||||||  ||||||||||||||  |||||||||||| |||||||||||||||||||||| |||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  137 gtattttgaaacggagggagtatc 160  Q
    ||||||| ||| ||| ||||||||    
T  13702790 gtattttaaaatggatggagtatc 13702767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  80 aaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  32 aaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||||||||||||||||  ||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacacatgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 37293539 - 37293436
Alignment:
Q  56 atagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggaggga 155  Q
    |||||||| ||||| | ||||||||||||| | || |||||||||||| ||||||   || ||||||||||||||||||| ||||| |||||||||||||    
T  37293539 atagaaaaaacacagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggaggga 37293440  T
Q  156 gtat 159  Q
    ||||    
T  37293439 gtat 37293436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 12094635 - 12094581
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 12094581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 37781069 - 37780988
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||||||||||||||||||||  |||||||||||||  |||||| | ||||||||||||||||||||||||||| |||||||    
T  37781069 aatgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttatttaatttctt 37780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 44277455 - 44277509
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagtat 44277509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 19911562 - 19911509
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagta 19911509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 27707119 - 27707172
Alignment:
Q  14 agagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacaca 67  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  27707119 agagaaaaaaataaaaagaaataataaatggttaaggatattatagaaaacaca 27707172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 48963225 - 48963155
Alignment:
Q  87 ataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||| ||||||||||| |||||||  ||||||||| |||||| || |||||||||||||||||||||||||    
T  48963225 ataaaaattatttgatttattggtta--gcaatttctccaaaatagatatgtattttgaaacggagggagtat 48963155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  32 aaataataaatggttaagggtattatagaa--aacacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||||||||||||| ||| | |||||||||  |||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 19897067 - 19897152
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatttgatttct 106  Q
    |||| |||||||||||||| |  ||||||||||||||  |||||||| | | |||||| |||||||| ||||||||||||||||||    
T  19897067 aatagaatgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 26105180 - 26105079
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattat-agaaaacac-acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| | | ||||||| | | |   |||| |||||||| |||||||||||||||| |||    
T  26105180 gagagagaaaaaaatataatgaaataataaatggttaagggtattgtaaaaaaacacaaaaaaaaatcattaaaaataacaaaatttatttgatttattg 26105081  T
Q  109 gt 110  Q
    ||    
T  26105080 gt 26105079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 53559750 - 53559880
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtat--tatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    ||||||||||||||||||| || ||||| |||  || | |||||||| | | ||||||||||||||| || ||||||||| ||||||| |   || ||||    
T  53559750 aataaaatgaaataataaacgggtaaggatatcgtaaataaaacacagagaatttcatcaaaaataacaacatttatttgttttcttgatatgtgtaatt 53559849  T
Q  121 tcttcaaaatggacatgtattttgaaacgga 151  Q
    |||||||||   ||| ||||| |||||||||    
T  53559850 tcttcaaaagcaacaagtattgtgaaacgga 53559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 19912174 - 19912216
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagtat 19912216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 38806341 - 38806383
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagtat 38806383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  73 tttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtatt 141  Q
    ||||||||||||||| |||||||||||| ||| |||| ||| | ||||||| ||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Original strand, 42490430 - 42490461
Alignment:
Q  130 tggacatgtattttgaaacggagggagtatca 161  Q
    ||||||||||||||||||||||||||||||||    
T  42490430 tggacatgtattttgaaacggagggagtatca 42490461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 18355906 - 18355868
Alignment:
Q  120 ttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  18355906 ttcttcaaaatggacaagtattgtgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 24064361 - 24064315
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacaca 69  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||    
T  24064361 aatagaataaaataataaatgggtaagggtattatagaaaaaacaca 24064315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||  ||||||||||| |||||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 27010502 - 27010473
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  27010502 tggacatgtattttgaaacggagggagtat 27010473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 27010708 - 27010737
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  27010708 tggacatgtattttgaaacggagggagtat 27010737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 44276816 - 44276775
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||  ||||||||||||||||||||||||||| |||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagta 44276775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 4226759 - 4226716
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacg 149  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||    
T  4226759 cttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 6910568 - 6910596
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  6910568 tggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 13499569 - 13499597
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  13499569 tggacatgtattttgaaacggagggagta 13499597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 19823928 - 19823900
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  19823928 tggacatgtattttgaaacggagggagta 19823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 20765430 - 20765458
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  20765430 tggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 42761511 - 42761483
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42761511 tggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 42761717 - 42761745
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42761717 tggacatgtattttgaaacggagggagta 42761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 6e-61; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 8626631 - 8626482
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  8626631 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 8626532  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8626531 gttaatgcaatttcttcaaaatggacatgtattttgaaacggagggagta 8626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 29260341 - 29260191
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  29260341 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 29260242  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  29260241 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtat 29260191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 7761438 - 7761300
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  7761438 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatt 7761339  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  7761338 tctccaaaatggacatgtattttgaaacggagggagtat 7761300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 1605727 - 1605578
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  1605727 gagagagaa-aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 1605629  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  1605628 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtat 1605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 30734611 - 30734753
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  30734611 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 30734710  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacgga 151  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  30734711 gttagtgcaatttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 13757356 - 13757205
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  13757356 gagagagaa-aaaataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 13757258  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatca 161  Q
    |||| || ||||||| |||||||||||||||||||||||||||| ||||||||    
T  13757257 gttagtgtaatttctccaaaatggacatgtattttgaaacggagagagtatca 13757205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 30734771 - 30734879
Alignment:
Q  44 gttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtatttt 143  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  30734771 gttaagggtattatagaaaacacacataatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtatttt 30734870  T
Q  144 gaaacggag 152  Q
    |||||||||    
T  30734871 gaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 15064823 - 15064972
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||| ||| |||||||||||||||||||||| |||| |||||||||| ||  ||||||||||||||| |||||||||||| |||||||    
T  15064823 gagagagaa-aaaatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttg 15064921  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  15064922 gttgctgcaatttctctaaaatggacatgtattttgaaacggagggagtat 15064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 17942593 - 17942442
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatt--tatttgatttctt 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||||||||| ||||    |||||| ||||||    
T  17942593 agagagaaaaaaataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttctt 17942494  T
Q  108 ggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  17942493 ggttactgcaatttctcaaaaatggacatgtattttgaaacgaagggagtat 17942442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 31559865 - 31559998
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaaca--cacatattttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    |||||||  |||| |||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||| ||||    
T  31559865 agagagagaaaaaaaaaatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttgg 31559964  T
Q  110 ttactgcaatttcttcaaaatggacatgtatttt 143  Q
    ||| |||||||||| |||||||||||||||||||    
T  31559965 ttaatgcaatttctccaaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 4129576 - 4129435
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaaca--cacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||        |||    
T  4129576 gagagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttat--------ttg 4129485  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  4129484 gttactgcaatttctccaaagtggatatgtattttgaaacggagggagta 4129435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 8235763 - 8235624
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||  | |||| |||||||| ||| |||||||  |||||||||||||||||    
T  8235763 aaaatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaa 8235664  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||| ||||||||||| |||  |||||||||    
T  8235663 tttcttcaaaatgtacatgtattttaaaatagagggagta 8235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 14287125 - 14286986
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaaca-cacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaattt 121  Q
    ||||||||||||||||||| || |||||||||||||||||| | |||| | |||||| |||||||| |||||||||||||||| ||||    || |||||    
T  14287125 aataaaatgaaataataaaggggtaagggtattatagaaaaaagcacagaatttcataaaaaataacaaaatttatttgatttattggcatgtgtaattt 14287026  T
Q  122 cttcaaaatggacatgtattttgaaacggagggagtatca 161  Q
      ||||||   ||| ||||| |||||||||||||||||||    
T  14287025 tctcaaaaactacaagtattgtgaaacggagggagtatca 14286986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 19996715 - 19996769
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagtat 19996769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 26860902 - 26860819
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||| ||| |||||||||||||||||||||  ||||||| | ||||| | ||||||||||||||| |||| |||||||||||||||    
T  26860902 aatagaataaaataataaatggttaagggt--tatagaataaacacaaaatttcatcaaaaataaaaaaagttatttgatttcttg 26860819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 21277574 - 21277659
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaa-cacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||| |||||| || |||||  ||||||||||||||||||| |||| | |||||||| |||||||| |||||||||||||||||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaaacacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

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Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 11370630 - 11370711
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaaacacacat--attttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||| ||||||||||||||||| |||||||| |||| |||||   | | ||||||||||||| |||||||||||||||||||    
T  11370630 aatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 33845449 - 33845505
Alignment:
Q  47 aagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatt 103  Q
    ||||||| ||||||||| | ||||| ||||||||||||||| |||||||||||||||    
T  33845449 aagggtactatagaaaaaatacataatttcatcaaaaataacaaaatttatttgatt 33845505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 3798233 - 3798151
Alignment:
Q  30 tgaaataataaatggttaagggtattatagaaaacacacatatt--ttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||||||||  ||||||| |||||||||| ||||| ||   ||||| |||||||| |||||||||||||||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 19996363 - 19996321
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagtat 19996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 1814680 - 1814594
Alignment:
Q  73 tttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||| ||| |||||||||||||||| |   || |||||  ||||||  |||| ||||| ||||||||| |||||||    
T  1814680 tttcatcaaaaataacaaagtttatttgatttcttgatatgtgtaattttctcaaaagcgacaagtattgtgaaacggatggagtat 1814594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 4147959 - 4147930
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  4147959 tggacatgtattttgaaacggagggagtat 4147930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 18668716 - 18668687
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  18668716 tggacatgtattttgaaacggagggagtat 18668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 18668922 - 18668951
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  18668922 tggacatgtattttgaaacggagggagtat 18668951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 19087986 - 19087957
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  19087986 tggacatgtattttgaaacggagggagtat 19087957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 19088192 - 19088221
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  19088192 tggacatgtattttgaaacggagggagtat 19088221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 20437045 - 20437016
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  20437045 tggacatgtattttgaaacggagggagtat 20437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 24623969 - 24623940
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  24623969 tggacatgtattttgaaacggagggagtat 24623940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 32414913 - 32414942
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  32414913 tggacatgtattttgaaacggagggagtat 32414942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 32420754 - 32420783
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  32420754 tggacatgtattttgaaacggagggagtat 32420783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 32671844 - 32671815
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  32671844 tggacatgtattttgaaacggagggagtat 32671815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 22055006 - 22055034
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  22055006 tggacatgtattttgaaacggagggagta 22055034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 25476042 - 25476070
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  25476042 tggacatgtattttgaaacggagggagta 25476070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 40783785 - 40783938
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  40783785 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttg 40783884  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatcaa 162  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40783885 gttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagtatcaa 40783938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 47037980 - 47038127
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  47037980 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttatttgatttcttagt 47038079  T
Q  111 tactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    || | |||||||| ||||||||||||||||||||||||||| ||||||    
T  47038080 tagtacaatttctccaaaatggacatgtattttgaaacggatggagta 47038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 23045407 - 23045556
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  23045407 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 23045506  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  23045507 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 23045556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 284482 - 284333
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||    
T  284482 gagagagagaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttg 284383  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  284382 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 24772043 - 24772182
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| ||| ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||    
T  24772043 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 24772142  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24772143 tttcttcaaaatggacatgtattttgaaacggagggagta 24772182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 321775 - 321626
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||||| || ||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  321775 gagagaaaaaaaaataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 321676  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  321675 gttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 27211102 - 27211240
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||| ||||||||||| |||||    
T  27211102 aaaatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaa 27211201  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagt 157  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  27211202 tttctccaaaatggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 46771776 - 46771644
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  46771776 aaaatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaa 46771677  T
Q  119 tttcttcaaaatggacatgtattttgaaacgga 151  Q
    ||||| |||||||||||||||||||||||||||    
T  46771676 tttctccaaaatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 23526379 - 23526239
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| |||||||||||| ||||||| |||||||||    
T  23526379 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaa 23526280  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||| ||||||| ||||||||||||||| ||| |||||||    
T  23526279 tttctccaaaatgaacatgtattttgaaatggaaggagtat 23526239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 52037252 - 52037382
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggtt 111  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |||| |    
T  52037252 agagagaa-aaaatagaatgaaataataaatggttaagagtattatagaaaacacacataattttatcaaaaataataaaatttatttggttttttggat 52037350  T
Q  112 actgcaatttcttcaaaatggacatgtatttt 143  Q
    | ||||||||||  ||||||||||||||||||    
T  52037351 aatgcaatttctctaaaatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 33082884 - 33082765
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| ||| ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  33082884 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 33082785  T
Q  119 tttcttcaaaatggacatgt 138  Q
    ||||| |||||| |||||||    
T  33082784 tttctccaaaatagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 1749455 - 1749314
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    |||||||  |||||| ||| ||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||     
T  1749455 agagagagaaaaatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttga 1749356  T
Q  110 ttactgcaatttcttcaaaatggacatgtattttgaaacgga 151  Q
    ||||||  |||| ||  ||||||| ||||||||| |||||||    
T  1749355 ttactgtgattttttttaaatggaaatgtattttaaaacgga 1749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  32 aaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacacataatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 52478103 - 52478016
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| |||||||| ||||||  |||||| |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||    
T  52478103 aatagaatgaaatgataaatttttaaggttattatagaaaaaacacaaaatttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 3943113 - 3943059
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 3943059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 9588723 - 9588669
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 9588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 13984991 - 13985044
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 41959131 - 41959078
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagta 41959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 31003926 - 31004012
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| ||| ||||||||||||||||||||||||||||  |||| ||||||| |||||| |||   |||||||||||||||||||||||||    
T  31003926 aatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaa---aataaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 40261419 - 40261549
Alignment:
Q  31 gaaataataaatggttaagggtattatagaaaa---cacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaa 127  Q
    |||||||||||||||||| | ||||||||||||   |||||  | ||||||||||| ||| ||||||||||||||||||||||   || || ||  ||||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggtatgtgtaaatttctcaa 40261518  T
Q  128 aatggacatgtattttgaaacggagggagta 158  Q
    ||   ||||||||| ||||||||||||||||    
T  40261519 aagcaacatgtattgtgaaacggagggagta 40261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 51064893 - 51065033
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattat-----agaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgca 117  Q
    |||| |||||||||||||| |  ||||||||||||     | |||||||| | | ||||||||||||| | || |||||||||||| ||||||   || |    
T  51064893 aatataatgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgta 51064992  T
Q  118 atttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||| |||||||||| ||||| ||||||||||||||||    
T  51064993 atttctttaaaatggacaagtattgtgaaacggagggagta 51065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 7765154 - 7765072
Alignment:
Q  19 agaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttattt 99  Q
    |||||| ||||| |||||||||||||||| ||||||||  ||||||||||||||  ||||| ||||||||| |||||||||||    
T  7765154 agaaaaaaaaattaaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 34458863 - 34458950
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||| |||||||||||||||   ||||| |||||||||||| ||||| | |||||| |||||||  ||||||||||||||||||||||    
T  34458863 aatagaatgaaataataaattagtaaggttattatagaaaaaacacagaatttcataaaaaatagaaaaatttatttgatttcttggt 34458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  38 taaatggttaagggtattatagaaaacaca--catattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||||||| |||||||||||| |||  || | |||||| |||||||| ||||||||||||||||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 44227889 - 44227847
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagtat 44227847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 44228228 - 44228282
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggaggtagtat 44228282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacgg 150  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 18396832 - 18396749
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgattt 104  Q
    |||| ||||||||||| |||||||||   ||||||||||||  |||||||| |||||| |||||||| ||||||||||| ||||    
T  18396832 aatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttatttaattt 18396749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 25929241 - 25929113
Alignment:
Q  31 gaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaat 130  Q
    |||||||||||||||||||| |||  ||||||| ||||| | ||| ||||||| ||| ||||||||||| |||| |||||   || || ||||||||||     
T  25929241 gaaataataaatggttaaggatatcgtagaaaaaacacagaatttaatcaaaattaacaaaatttatttaattttttggtatgtgtaaattcttcaaaag 25929142  T
Q  131 ggacatgtattttgaaacggagggagtat 159  Q
     || | ||||| |||||| || |||||||    
T  25929141 cgataagtattgtgaaacagatggagtat 25929113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  35 taataaatggttaagggtattatagaaaacacacatat-tttcatcaaaaataataaaatttatt 98  Q
    |||||||||||||| |||||||||||||||||| ||||  || ||||||||||| ||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataatttatcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 27143151 - 27143239
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaaca---cacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||| |||||||||||||||| |||||  |||||||||||| |   |||  | |||| |||||||||| ||||||||||||||||||||    
T  27143151 aatagaatgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 41959809 - 41959851
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagtat 41959851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 24876699 - 24876636
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataa 87  Q
    |||| |||||||| ||||||||| || |||||||||||||| ||||||| | |||||||||||||    
T  24876699 aatagaatgaaatgataaatggtcaaaggtattatagaaaa-acacataatatcatcaaaaataa 24876636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  92 atttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttg 144  Q
    ||||||||| ||||||||||||||| |||| | |||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 9589631 - 9589674
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtatc 160  Q
    |||||||  ||||| |||||||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggagtatc 9589674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 23526478 - 23526517
Alignment:
Q  120 ttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  23526478 ttcttcaaaatggacaagtattatgaaacggagggagtat 23526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Complemental strand, 30701746 - 30701715
Alignment:
Q  130 tggacatgtattttgaaacggagggagtatca 161  Q
    ||||||||||||||||||||||||||||||||    
T  30701746 tggacatgtattttgaaacggagggagtatca 30701715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 31061594 - 31061659
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattat--agaaaacacacatattttcatcaaaaataa 87  Q
    |||| ||||||||||||||||||| ||||||||||  | |||||||||||| |||||| ||||||||    
T  31061594 aatataatgaaataataaatggtt-agggtattatggaaaaaacacacataatttcataaaaaataa 31061659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 10845513 - 10845479
Alignment:
Q  126 aaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||||||||||||||||||||||||| |||||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagtatc 10845479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 6402644 - 6402673
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  6402644 tggacatgtattttgaaacggagggagtat 6402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 11641095 - 11641066
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  11641095 tggacatgtattttgaaacggagggagtat 11641066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 36399332 - 36399361
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  36399332 tggacatgtattttgaaacggagggagtat 36399361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 36757514 - 36757485
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  36757514 tggacatgtattttgaaacggagggagtat 36757485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 37926945 - 37926900
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacac 68  Q
    ||||||||||| |||||||| || ||||||||||||||||| ||||    
T  37926945 aataaaatgaagtaataaattgtcaagggtattatagaaaaaacac 37926900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 40771800 - 40771771
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  40771800 tggacatgtattttgaaacggagggagtat 40771771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 40772006 - 40772035
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  40772006 tggacatgtattttgaaacggagggagtat 40772035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 16120674 - 16120702
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  16120674 tggacatgtattttgaaacggagggagta 16120702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 52024260 - 52024288
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  52024260 tggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 36453252 - 36453399
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  36453252 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttg 36453351  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggag 156  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  36453352 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 36453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 27813960 - 27813810
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacaca--catattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||||||    
T  27813960 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttg 27813861  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  27813860 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtat 27813810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 10981657 - 10981507
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  10981657 gagagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 10981558  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  10981557 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtat 10981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 40349109 - 40348960
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  40349109 gagagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttg 40349010  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  40349009 gttagtgcaatttctccaaaatggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 25614481 - 25614628
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  25614481 gagagagaaaaaaataaaatgaaataataaatgattaagggtatttcagaaaacacacatattttcatcaaaaataacaaaatttatttggttttttggt 25614580  T
Q  111 tactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    || |||||||||| ||||||||||||||||||||||||||| ||||||    
T  25614581 tagtgcaatttctccaaaatggacatgtattttgaaacggaaggagta 25614628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 47110588 - 47110451
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  47110588 aaaataaaataaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatt 47110489  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||| ||||||||||||||||||||||| ||||||||||    
T  47110488 tctccaaaatggacatgtattttgaaatggagggagta 47110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 16360511 - 16360438
Alignment:
Q  31 gaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgattt 104  Q
    ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaaaaacacagaatttcatcaaaaataacaaaatttatttgattt 16360438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 16662231 - 16662146
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||| ||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  16662231 aatataataaaataataaatggttaagggtattataaaaaaaacacaaattttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 17636591 - 17636506
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||| ||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  17636591 aatataataaaataataaatggttaagggtattataaaaaaaacacaaattttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 3091649 - 3091565
Alignment:
Q  28 aatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||||||||||||||||||||||||||  |||||||| | | ||||||||||||||| |||||||||||||||| |||||    
T  3091649 aatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 25060133 - 25060187
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 25060187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 37983289 - 37983179
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttc 122  Q
    |||| ||||||||||||||||||||| ||||||||| |||||| | |   ||||||||||||||| |||||||||||||||||||| |   || ||||||    
T  37983289 aatataatgaaataataaatggttaaaggtattataaaaaacataaaa--tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttc 37983192  T
Q  123 ttcaaaatggaca 135  Q
     ||||||||||||    
T  37983191 ctcaaaatggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 7743542 - 7743625
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaa-acacacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    |||||||||||||||  |||| ||||||||||||| | ||||||| ||||||||||||||| |||||||||||||| |||||||    
T  7743542 aatgaaataataaataattaacggtattatagaaagaaacacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 2911548 - 2911602
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagtat 2911602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 27942177 - 27942256
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatag--aaaacacacatattttcatcaaaaataataaaatttatt 98  Q
    |||||| ||||||||||||||||||||| ||||||||||  |||||||||||| | |||| |||||||| ||||||||||    
T  27942177 aaaatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 3498884 - 3498983
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaa--acacacatattttcatcaaaaataataaaatttatttgatttcttgg 109  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||  | ||| | | |||||| |||||||| |||||| |||||| || ||||    
T  3498884 agagagaa-aaaataaaatgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaattaatttgaatttttgg 3498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 2910900 - 2910858
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagtat 2910858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Original strand, 38852081 - 38852112
Alignment:
Q  130 tggacatgtattttgaaacggagggagtatca 161  Q
    ||||||||||||||||||||||||||||||||    
T  38852081 tggacatgtattttgaaacggagggagtatca 38852112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 8380026 - 8379948
Alignment:
Q  74 ttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggag 152  Q
    ||||| || ||||| ||||||||||||||||||| ||   || |||||| ||||||| |||| ||||| ||||||||||    
T  8380026 ttcattaacaataacaaaatttatttgatttcttagtatatgtaatttcctcaaaatcgacaagtattgtgaaacggag 8379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 41898016 - 41897986
Alignment:
Q  130 tggacatgtattttgaaacggagggagtatc 160  Q
    |||||||||||||||||||||||||||||||    
T  41898016 tggacatgtattttgaaacggagggagtatc 41897986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 16778533 - 16778504
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  16778533 tggacatgtattttgaaacggagggagtat 16778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 25566576 - 25566547
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  25566576 tggacatgtattttgaaacggagggagtat 25566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 28061543 - 28061514
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  28061543 tggacatgtattttgaaacggagggagtat 28061514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 28061749 - 28061778
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  28061749 tggacatgtattttgaaacggagggagtat 28061778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 41898222 - 41898251
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  41898222 tggacatgtattttgaaacggagggagtat 41898251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 47156261 - 47156290
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  47156261 tggacatgtattttgaaacggagggagtat 47156290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 20885131 - 20885103
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  20885131 tggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 36623336 - 36623308
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  36623336 tggacatgtattttgaaacggagggagta 36623308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 36623542 - 36623570
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  36623542 tggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 42877414 - 42877386
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42877414 tggacatgtattttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 46103398 - 46103370
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  46103398 tggacatgtattttgaaacggagggagta 46103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 46103597 - 46103625
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  46103597 tggacatgtattttgaaacggagggagta 46103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 47156055 - 47156027
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  47156055 tggacatgtattttgaaacggagggagta 47156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 25773788 - 25773649
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacaca--tattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  25773788 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 25773689  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  25773688 tttctccaaaatggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 12806981 - 12807130
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  12806981 gagagaggaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 12807080  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  12807081 gttaatgcaatttctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 30720620 - 30720769
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  30720620 gagagagaaaaaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 30720719  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30720720 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 30720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 40886738 - 40886887
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||    
T  40886738 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttg 40886837  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  40886838 gttagtgcaatttctccaaaatgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 10285185 - 10285335
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||  |||||||    
T  10285185 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttg 10285284  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||| ||||| ||||||||||||||||||||||    
T  10285285 gttaatgcaatttctccaaaatagacatctattttgaaacggagggagtat 10285335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 36561227 - 36561376
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  36561227 gagagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 36561326  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
     |||||||||||| |  |||||||||||||||||||||||||| ||||||    
T  36561327 attactgcaatttttctaaaatggacatgtattttgaaacggatggagta 36561376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 37900762 - 37900902
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||  |||||||||||||||||    
T  37900762 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaa 37900861  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  37900862 tttctccaaaatggatgtgtattttgaaacggagggagtat 37900902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 7277560 - 7277688
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||| ||  ||| ||||||||||| |||||||||||| ||| ||||||||| |||    
T  7277560 aaaatataatgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaa 7277659  T
Q  119 tttcttcaaaatggacatgtattttgaaa 147  Q
    ||||| |||||| ||||||||||||||||    
T  7277660 tttctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 16983407 - 16983255
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaat--ttatttgatttctt 107  Q
    |||||||| |||  ||||| ||||||||| |||||||||||||| ||||||| ||||||||  |||||||||||| || ||||   ||||||| ||||||    
T  16983407 agagagaaaaaataaaaataaaataataa-tggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttctt 16983309  T
Q  108 ggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtatca 161  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  16983308 ggttactgcaatttctccaaaatggacatgtattttgaaacagagggagtatca 16983255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 25683357 - 25683467
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaa--acacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  25683357 gagagagaa-aaaatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttg 25683455  T
Q  109 gttactgcaatt 120  Q
    |||| |||||||    
T  25683456 gttattgcaatt 25683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 734478 - 734611
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaa-cacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaattt 121  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| | | ||||||||| ||| | |||||||||||||||  |||||    | |||||    
T  734478 aatagaatgaaataataaatgagtaagggtattatagaaaaacacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaattt 734577  T
Q  122 cttcaaaatggacatgtattttgaaacggaggga 155  Q
    |||||||||||||| ||||| |||||||||||||    
T  734578 cttcaaaatggacaagtattgtgaaacggaggga 734611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 23098386 - 23098504
Alignment:
Q  35 taataaatggttaagggtattatagaaaaca--cacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatgg 132  Q
    ||||||||||||||||||||||||| |||||  |||||| ||||||||||||||| |||||||||||  |||||       || |||||||||||| |||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttct-------tgtaatttcttcaaattgg 23098478  T
Q  133 acatgtattttgaaacggagggagtat 159  Q
    ||||||| ||||||||||| |||||||    
T  23098479 acatgta-tttgaaacggatggagtat 23098504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 39071020 - 39070882
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||||     ||||||||||||| | || |||||||||||| |||  |   || ||||    
T  39071020 aatagaatgaaataataaatgagtaagggtattatagaaaaaacacaacagatttcatcaaaaatgacaacatttatttgattccttaatatgtgtaatt 39070921  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||| ||| ||||| |||||||||||||||||    
T  39070920 tcttcaaaatgaacaagtattgtgaaacggagggagtat 39070882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 15305216 - 15305265
Alignment:
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 16054249 - 16054165
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||| ||| |||||||||||||| |||| |||||||||||| ||||| | |||||| |||||||| ||||||||||| |||||||    
T  16054249 aatagaataaaataataaatggtcaaggatattatagaaaaaacacaaaatttcataaaaaataacaaaatttatttcatttctt 16054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 30403101 - 30403191
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaaca---cacatattttcatcaaaaataataaaatttatttgatttcttggt 110  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| |   |||| | ||||||||||||||| |||||||||||| |||||||||    
T  30403101 aataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 11319696 - 11319558
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaacacacatat--tttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 120  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||| |   |||||| |||||| | || ||||||||||||  || ||   || ||||    
T  11319696 aatagaatgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatt 11319597  T
Q  121 tcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||||||||||  |||| ||||||||||| |||||    
T  11319596 tcttcaaaatggacaaatattgtgaaacggaggaagtat 11319558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 11796536 - 11796450
Alignment:
Q  73 tttcatcaaaaataataaaatttatttgatttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||| |||||| |||| ||||||||||  ||| |||||||||||||  |||| ||| | ||||| |||||||||||    
T  11796536 tttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaaggagggagtat 11796450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 15304863 - 15304821
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||||||  |||||||||||||||||| |||||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggagtat 15304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 1056422 - 1056507
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatag-aaaacacacatattttcatcaaaaataataaaatttatttgatttctt 107  Q
    |||| |||||||||||||||| | ||  ||||||||| |||||||| | | |||||| |||||||| ||||||||||  |||||||    
T  1056422 aatataatgaaataataaatgatcaatagtattatagaaaaacacaaagaatttcattaaaaataacaaaatttattcaatttctt 1056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 8086264 - 8086293
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  8086264 tggacatgtattttgaaacggagggagtat 8086293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 9502655 - 9502626
Alignment:
Q  130 tggacatgtattttgaaacggagggagtat 159  Q
    ||||||||||||||||||||||||||||||    
T  9502655 tggacatgtattttgaaacggagggagtat 9502626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 978105 - 978077
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  978105 tggacatgtattttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 978311 - 978339
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  978311 tggacatgtattttgaaacggagggagta 978339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 14634185 - 14634157
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  14634185 tggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 33387453 - 33387481
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  33387453 tggacatgtattttgaaacggagggagta 33387481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 27 - 177
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacac--acatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  27 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 126  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtat 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  127 gttagtgcaatttctccaaaatggacatgtattttgaaacggagagagtat 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 45593 - 45452
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttggttactgcaa 118  Q
    |||||| ||| ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||||||||  |||||    
T  45593 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaa 45494  T
Q  119 tttcttcaaaatggacatgtattttgaaacggagggagtatc 160  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  45493 tttctccaaaatgaacatgtattttgaaacggagggagtatc 45452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 311 - 170
Alignment:
Q  11 gagagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaaca--cacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||        |||    
T  311 gagagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttat--------ttg 220  T
Q  109 gttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  219 gttactgcaatttctccaaagtggatatgtattttgaaacggagggagta 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 394 - 525
Alignment:
Q  12 agagagaagaaaataaaatgaaataataaatggttaagggtattatagaaaacacacatattttcatcaaaaataataaaatttatttgatttcttggtt 111  Q
    |||||||  |||||| |||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||| ||| ||    
T  394 agagagagaaaaatagaatgaaataataaatgattaagggtattataaaaaacacacataattttatcaaaaataacaaaatttatttgattttttgatt 493  T
Q  112 actgcaatttcttcaaaatggacatgtatttt 143  Q
    |||||||||||  ||||||| |||||||||||    
T  494 actgcaatttcgccaaaatgaacatgtatttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 70961 - 70874
Alignment:
Q  23 aataaaatgaaataataaatggttaagggtattatagaaaa--cacacatattttcatcaaaaataataaaatttatttgatttcttg 108  Q
    |||| ||||||||||||||||||||||||| ||| ||||||  |||||| | ||||||||||||||| ||||||||||||||||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 23520 - 23467
Alignment:
Q  105 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 23872 - 23913
Alignment:
Q  117 aatttcttcaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||  |||||||||||||||||||||||||| ||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagta 23913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 65301 - 65375
Alignment:
Q  21 aaaataaaatgaaataataaatggttaagggtattatag---aaaacacacatattttcatcaaaaataataaaa 92  Q
    |||||| ||||||||||||||||||||||||||||||||   |||||||| ||| ||||||||||||||||||||    
T  65301 aaaatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 15465 - 15499
Alignment:
Q  28 aatgaaataataaatggttaagggtattatagaaa 62  Q
    ||||||||||||||||||||||||||| |||||||    
T  15465 aatgaaataataaatggttaagggtataatagaaa 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 100675 - 100647
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  100675 tggacatgtattttgaaacggagggagta 100647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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