View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12740_high_8 (Length: 469)
Name: NF12740_high_8
Description: NF12740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12740_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 434; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 12 - 453
Target Start/End: Complemental strand, 44676887 - 44676446
Alignment:
| Q |
12 |
gcagcacagacaacgagattaaaaactactggaactcacacttgagtagaaaagtttacagcttccgaggaacatcaacaacaaattataataatatcaa |
111 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676887 |
gcagaacagacaacgagattaaaaactactggaactcacacttgagtagaaaagtttacagcttccgaggaacatcaacaacaaattataataatatcaa |
44676788 |
T |
|
| Q |
112 |
agatatagagattccatcagaagaaggaatcatagtggatacacctcccaaacgtaaaggtggtagaactagtcgatgggctatgaagaagaacatacga |
211 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676787 |
agagatagagattccatcagaagaaggaatcatagtggatacacctcccaaacgtaaaggtggtagaactagtcgatgggctatgaagaagaacatacga |
44676688 |
T |
|
| Q |
212 |
tatatatcccaaaatgttttccaaaaaagtgaacctgcttcaattgttacacttccacccacccctacactagagaccgagaaaatggttatgggctcag |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676687 |
tatatatcccaaaatgttttccaaaaaagtgaacctgcttcaattgttacacttccacccacccctacactagagaccgagaaaatggttatgggctcag |
44676588 |
T |
|
| Q |
312 |
taaatgggccttgttctagtggtgaaaataatgatattgaagctgattgtgaccgtatgtttggaccagatctgaaggtcattaatgatggtgagttgtt |
411 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676587 |
taaatgggccttgttctagtggtgaaaataatgatattgaagctgattgtgaccgtatgtttggaccagatctgaaggtcattaatgatggtgagttgtt |
44676488 |
T |
|
| Q |
412 |
agattttaatgatattatcatggatgctttggaggtggaaga |
453 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676487 |
agattttaatgatattatcatggatgctttggaggtggaaga |
44676446 |
T |
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