View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12740_low_31 (Length: 303)
Name: NF12740_low_31
Description: NF12740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12740_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 47181532 - 47181253
Alignment:
| Q |
14 |
caaatttctcataaaagaaattacaaagattgtgaaatacggatatattgtccatgatggtgccttaggagttacgttacgtcacaaagaaagcggaaaa |
113 |
Q |
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| T |
47181532 |
caaatttttcataaaagaaattacaaagattgtgaaatacggatatattgtccatgatggtgccttaggagttacgttacgtcacaaagaaagcgcaaaa |
47181433 |
T |
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| Q |
114 |
gtaagtagtagattgttactcacctccaaatcctacccgtccgtatattgatgtgtggaaggactacaaaaacaaatggttttgtattgtaaattgtgaa |
213 |
Q |
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| T |
47181432 |
gtaagtagtagattgttactcacctccaaatcctacccgtccgtatattgatgtgtggaaggactacaaaaacaaatggttttgtattgtaaattgtgaa |
47181333 |
T |
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| Q |
214 |
attgagttataccaagtagtttgacttgaaaatgagagtgcaaagataagaagaaggagatctcactttcgtttcttctt |
293 |
Q |
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| T |
47181332 |
attgagttataccaagtagtttgacttgaaaatgagagtgcaaagataagaagaaggagatctcactttcttttcttctt |
47181253 |
T |
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