View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12740_low_45 (Length: 242)

Name: NF12740_low_45
Description: NF12740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12740_low_45
NF12740_low_45
[»] chr4 (45 HSPs)
chr4 (108-227)||(56076521-56076640)
chr4 (1-47)||(229658-229704)
chr4 (3-45)||(12593524-12593566)
chr4 (3-45)||(34789884-34789926)
chr4 (3-45)||(35644063-35644105)
chr4 (1-47)||(40160589-40160635)
chr4 (3-45)||(46737156-46737198)
chr4 (3-45)||(54440574-54440616)
chr4 (3-48)||(14439828-14439873)
chr4 (1-45)||(21034238-21034282)
chr4 (1-45)||(28465580-28465624)
chr4 (1-45)||(34789385-34789429)
chr4 (1-47)||(229162-229208)
chr4 (3-45)||(19528872-19528914)
chr4 (3-45)||(21034738-21034780)
chr4 (3-45)||(24851967-24852009)
chr4 (7-45)||(33689832-33689870)
chr4 (1-47)||(33777633-33777679)
chr4 (3-45)||(34807119-34807161)
chr4 (3-45)||(41608916-41608958)
chr4 (3-45)||(44219378-44219420)
chr4 (3-45)||(55677459-55677501)
chr4 (2-47)||(41114158-41114203)
chr4 (3-52)||(45839050-45839099)
chr4 (1-45)||(12593027-12593071)
chr4 (1-45)||(17503977-17504021)
chr4 (1-45)||(23986523-23986567)
chr4 (1-45)||(24336262-24336306)
chr4 (1-45)||(24851319-24851363)
chr4 (3-47)||(36168330-36168374)
chr4 (1-45)||(36168830-36168874)
chr4 (3-47)||(41608375-41608419)
chr4 (1-45)||(51310004-51310048)
chr4 (1-45)||(56077823-56077867)
chr4 (1-47)||(6616673-6616719)
chr4 (3-47)||(4220059-4220103)
chr4 (1-45)||(14440327-14440371)
chr4 (1-45)||(20958357-20958401)
chr4 (1-45)||(24335764-24335808)
chr4 (1-45)||(26974286-26974330)
chr4 (6-42)||(30598023-30598059)
chr4 (1-45)||(35193801-35193845)
chr4 (3-35)||(37336649-37336681)
chr4 (1-45)||(54441068-54441112)
chr4 (3-47)||(54995567-54995611)
[»] chr8 (31 HSPs)
chr8 (1-47)||(28877388-28877434)
chr8 (1-45)||(35427311-35427355)
chr8 (1-45)||(42035775-42035819)
chr8 (1-52)||(18428261-18428312)
chr8 (3-45)||(15255856-15255898)
chr8 (3-49)||(18050092-18050138)
chr8 (3-45)||(28254927-28254969)
chr8 (1-45)||(5730820-5730864)
chr8 (1-45)||(7911115-7911159)
chr8 (1-45)||(9797226-9797270)
chr8 (3-45)||(599535-599577)
chr8 (7-45)||(9796729-9796767)
chr8 (1-43)||(18049595-18049637)
chr8 (1-47)||(28876904-28876950)
chr8 (1-47)||(35426843-35426889)
chr8 (1-45)||(599997-600041)
chr8 (1-45)||(2208717-2208761)
chr8 (1-45)||(7910619-7910663)
chr8 (1-45)||(15256330-15256374)
chr8 (1-45)||(16578595-16578639)
chr8 (1-45)||(28254428-28254472)
chr8 (1-45)||(41260274-41260318)
chr8 (3-45)||(9930157-9930199)
chr8 (3-45)||(16578111-16578153)
chr8 (1-47)||(18805165-18805211)
chr8 (3-45)||(33742925-33742967)
chr8 (1-47)||(35694377-35694423)
chr8 (16-45)||(10046668-10046697)
chr8 (3-47)||(33328159-33328203)
chr8 (1-45)||(34799082-34799126)
chr8 (1-45)||(35693871-35693915)
[»] chr5 (26 HSPs)
chr5 (1-51)||(4966813-4966863)
chr5 (1-44)||(38900648-38900691)
chr5 (1-45)||(15029808-15029852)
chr5 (1-45)||(41834558-41834602)
chr5 (1-45)||(4967270-4967314)
chr5 (1-45)||(15115591-15115635)
chr5 (1-45)||(16753069-16753113)
chr5 (1-45)||(17260719-17260763)
chr5 (1-45)||(22651810-22651854)
chr5 (1-45)||(28290143-28290187)
chr5 (3-45)||(28289687-28289729)
chr5 (3-45)||(32697727-32697769)
chr5 (4-45)||(8419122-8419163)
chr5 (1-45)||(10721789-10721833)
chr5 (1-45)||(16752585-16752629)
chr5 (1-45)||(27307064-27307108)
chr5 (3-46)||(14340911-14340954)
chr5 (3-45)||(164194-164236)
chr5 (1-47)||(20266414-20266460)
chr5 (3-45)||(24362336-24362378)
chr5 (1-46)||(14340400-14340445)
chr5 (8-45)||(21371202-21371239)
chr5 (3-47)||(5818930-5818974)
chr5 (3-47)||(15372373-15372417)
chr5 (1-45)||(18149736-18149780)
chr5 (1-45)||(27307559-27307603)
[»] chr3 (61 HSPs)
chr3 (1-46)||(22370598-22370643)
chr3 (1-45)||(52375830-52375874)
chr3 (1-47)||(40838653-40838699)
chr3 (1-45)||(330335-330379)
chr3 (1-45)||(36701109-36701153)
chr3 (1-45)||(36701595-36701639)
chr3 (1-45)||(40275096-40275140)
chr3 (1-45)||(49407799-49407843)
chr3 (1-45)||(52237316-52237360)
chr3 (1-52)||(49951542-49951593)
chr3 (3-45)||(14654690-14654732)
chr3 (1-47)||(27199703-27199749)
chr3 (3-45)||(40275594-40275636)
chr3 (1-47)||(40839151-40839197)
chr3 (1-47)||(44676971-44677017)
chr3 (3-45)||(51827960-51828002)
chr3 (1-45)||(2051298-2051342)
chr3 (3-47)||(16689359-16689403)
chr3 (1-45)||(25534893-25534937)
chr3 (1-45)||(27200190-27200234)
chr3 (1-45)||(33412653-33412697)
chr3 (1-45)||(37075689-37075733)
chr3 (1-45)||(47431699-47431743)
chr3 (1-45)||(49408280-49408324)
chr3 (1-45)||(50901026-50901070)
chr3 (1-45)||(55390096-55390140)
chr3 (1-52)||(37076173-37076224)
chr3 (1-44)||(55389609-55389652)
chr3 (9-47)||(32730390-32730428)
chr3 (3-45)||(41998729-41998771)
chr3 (3-45)||(46013425-46013467)
chr3 (3-45)||(49720374-49720416)
chr3 (3-45)||(49952047-49952089)
chr3 (1-47)||(51473355-51473401)
chr3 (4-45)||(43678298-43678339)
chr3 (4-45)||(43678786-43678827)
chr3 (1-45)||(2044274-2044318)
chr3 (3-47)||(5136981-5137025)
chr3 (1-45)||(16701291-16701335)
chr3 (3-47)||(25612477-25612521)
chr3 (1-45)||(30513725-30513769)
chr3 (1-45)||(38535312-38535356)
chr3 (1-45)||(41998232-41998276)
chr3 (1-45)||(49720860-49720904)
chr3 (1-45)||(51828457-51828501)
chr3 (1-45)||(52236819-52236863)
chr3 (1-45)||(52375330-52375374)
chr3 (1-45)||(55192121-55192165)
chr3 (1-44)||(329850-329893)
chr3 (1-52)||(43222889-43222940)
chr3 (3-45)||(23644465-23644507)
chr3 (3-45)||(30104485-30104527)
chr3 (4-42)||(34105152-34105190)
chr3 (7-45)||(39010078-39010116)
chr3 (3-45)||(44676475-44676517)
chr3 (3-45)||(51472858-51472900)
chr3 (3-45)||(51828542-51828584)
chr3 (1-45)||(14654202-14654246)
chr3 (1-45)||(43222393-43222437)
chr3 (1-45)||(43973444-43973488)
chr3 (1-45)||(50662911-50662955)
[»] chr1 (43 HSPs)
chr1 (1-46)||(17641868-17641913)
chr1 (1-54)||(50304433-50304486)
chr1 (1-51)||(44954725-44954775)
chr1 (3-45)||(10278551-10278593)
chr1 (3-45)||(29438933-29438975)
chr1 (1-47)||(39485066-39485112)
chr1 (1-47)||(45048634-45048680)
chr1 (1-46)||(45048157-45048202)
chr1 (1-45)||(2867914-2867958)
chr1 (1-45)||(30786774-30786818)
chr1 (1-45)||(37505070-37505114)
chr1 (1-45)||(50926740-50926784)
chr1 (1-52)||(23526654-23526705)
chr1 (1-44)||(25274760-25274803)
chr1 (3-45)||(1837508-1837550)
chr1 (3-45)||(44802672-44802714)
chr1 (1-45)||(2868207-2868251)
chr1 (3-43)||(4080026-4080066)
chr1 (1-45)||(8229640-8229684)
chr1 (1-45)||(9992654-9992698)
chr1 (1-45)||(17088149-17088193)
chr1 (1-45)||(17088638-17088682)
chr1 (1-45)||(29021364-29021408)
chr1 (1-45)||(34555881-34555925)
chr1 (3-47)||(37421161-37421205)
chr1 (1-45)||(44291304-44291348)
chr1 (1-45)||(50926233-50926277)
chr1 (3-42)||(39843525-39843564)
chr1 (1-47)||(8230140-8230186)
chr1 (3-45)||(16298685-16298727)
chr1 (1-47)||(21938564-21938610)
chr1 (3-45)||(23340186-23340228)
chr1 (3-45)||(34555382-34555424)
chr1 (1-47)||(37421444-37421490)
chr1 (3-45)||(44582060-44582102)
chr1 (1-47)||(50419391-50419437)
chr1 (3-45)||(50419761-50419803)
chr1 (1-45)||(1744331-1744375)
chr1 (3-47)||(5963078-5963122)
chr1 (1-45)||(10279046-10279090)
chr1 (3-47)||(15173097-15173141)
chr1 (1-45)||(44582558-44582602)
chr1 (1-45)||(44954229-44954273)
[»] chr2 (49 HSPs)
chr2 (3-51)||(9330296-9330344)
chr2 (1-45)||(42192742-42192786)
chr2 (1-45)||(42192243-42192287)
chr2 (1-45)||(44220144-44220188)
chr2 (3-45)||(6949945-6949987)
chr2 (1-47)||(20495194-20495240)
chr2 (3-45)||(25336101-25336143)
chr2 (3-45)||(38007953-38007995)
chr2 (1-45)||(649836-649880)
chr2 (1-45)||(5560054-5560098)
chr2 (1-45)||(11539640-11539684)
chr2 (1-45)||(11540137-11540181)
chr2 (1-45)||(14942345-14942389)
chr2 (1-45)||(24140173-24140217)
chr2 (1-45)||(28143528-28143572)
chr2 (1-45)||(31797276-31797320)
chr2 (1-45)||(33921111-33921155)
chr2 (1-45)||(38008450-38008494)
chr2 (3-46)||(3822923-3822966)
chr2 (3-45)||(4355758-4355800)
chr2 (3-45)||(16953435-16953477)
chr2 (3-45)||(20128238-20128280)
chr2 (3-45)||(32418162-32418204)
chr2 (3-45)||(33920615-33920657)
chr2 (1-45)||(62960-63004)
chr2 (3-47)||(3824209-3824253)
chr2 (5-45)||(4356259-4356299)
chr2 (1-45)||(4809378-4809422)
chr2 (3-47)||(15550674-15550718)
chr2 (1-45)||(16952938-16952982)
chr2 (1-45)||(17060909-17060953)
chr2 (1-45)||(20127739-20127783)
chr2 (1-47)||(63463-63509)
chr2 (3-45)||(649530-649572)
chr2 (1-47)||(9329913-9329959)
chr2 (1-47)||(13315494-13315540)
chr2 (1-47)||(15551174-15551220)
chr2 (3-45)||(20440531-20440573)
chr2 (3-45)||(20444752-20444794)
chr2 (3-45)||(43160012-43160054)
chr2 (3-45)||(43216210-43216252)
chr2 (3-44)||(16175851-16175892)
chr2 (1-45)||(6949454-6949498)
chr2 (3-47)||(11090522-11090566)
chr2 (1-45)||(35779711-35779755)
chr2 (3-47)||(40027640-40027684)
chr2 (3-47)||(40815845-40815889)
chr2 (1-45)||(43160510-43160554)
chr2 (1-45)||(44219647-44219691)
[»] chr7 (43 HSPs)
chr7 (1-45)||(5334318-5334362)
chr7 (1-45)||(34594586-34594630)
chr7 (1-45)||(34595271-34595315)
chr7 (1-47)||(787285-787331)
chr7 (3-45)||(27245206-27245248)
chr7 (3-45)||(39388769-39388811)
chr7 (1-46)||(5745641-5745686)
chr7 (1-46)||(25637697-25637742)
chr7 (1-45)||(2758197-2758241)
chr7 (1-45)||(5333883-5333927)
chr7 (1-45)||(7732986-7733030)
chr7 (1-45)||(9181535-9181579)
chr7 (1-45)||(15712368-15712412)
chr7 (1-45)||(16917716-16917760)
chr7 (1-45)||(49064037-49064081)
chr7 (3-45)||(5746141-5746183)
chr7 (3-45)||(16081800-16081842)
chr7 (3-45)||(24929809-24929851)
chr7 (1-47)||(35160654-35160700)
chr7 (1-47)||(40669707-40669753)
chr7 (3-45)||(48247590-48247632)
chr7 (1-45)||(786785-786829)
chr7 (3-47)||(5184429-5184473)
chr7 (1-45)||(9393739-9393783)
chr7 (3-47)||(26026318-26026362)
chr7 (1-45)||(28687596-28687640)
chr7 (3-47)||(28688000-28688043)
chr7 (6-42)||(35161306-35161342)
chr7 (1-45)||(35579384-35579428)
chr7 (1-45)||(39136689-39136733)
chr7 (1-45)||(48248091-48248135)
chr7 (3-45)||(7732491-7732533)
chr7 (3-45)||(9181913-9181955)
chr7 (3-45)||(25637200-25637242)
chr7 (3-45)||(26048447-26048489)
chr7 (11-48)||(11973911-11973948)
chr7 (1-54)||(35578893-35578946)
chr7 (1-45)||(9394229-9394272)
chr7 (1-45)||(11971337-11971381)
chr7 (3-47)||(19830421-19830465)
chr7 (1-45)||(38160954-38160998)
chr7 (1-45)||(39137032-39137076)
chr7 (13-45)||(45815347-45815379)
[»] chr6 (19 HSPs)
chr6 (1-45)||(22534223-22534267)
chr6 (3-45)||(5120970-5121012)
chr6 (1-47)||(31242807-31242853)
chr6 (3-45)||(31574226-31574268)
chr6 (3-47)||(25468850-25468894)
chr6 (1-45)||(35163686-35163730)
chr6 (3-45)||(30250724-30250766)
chr6 (3-45)||(31073643-31073685)
chr6 (1-47)||(35163185-35163231)
chr6 (1-45)||(25472512-25472556)
chr6 (1-45)||(31573723-31573767)
chr6 (1-45)||(32836495-32836539)
chr6 (3-45)||(10900430-10900472)
chr6 (3-45)||(28472640-28472682)
chr6 (3-45)||(29859829-29859871)
chr6 (3-48)||(18504919-18504964)
chr6 (1-46)||(24640684-24640729)
chr6 (2-47)||(32836008-32836053)
chr6 (9-45)||(29891591-29891627)
[»] scaffold0097 (2 HSPs)
scaffold0097 (1-45)||(46269-46313)
scaffold0097 (1-45)||(46767-46811)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-45)||(205866-205910)
scaffold0007 (1-45)||(210836-210880)
scaffold0007 (5-47)||(204929-204971)
[»] scaffold1432 (1 HSPs)
scaffold1432 (1-45)||(564-608)
[»] scaffold0712 (1 HSPs)
scaffold0712 (3-47)||(6897-6941)
[»] scaffold0709 (1 HSPs)
scaffold0709 (3-47)||(6915-6959)
[»] scaffold0173 (1 HSPs)
scaffold0173 (3-47)||(6581-6625)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-45)||(15116-15160)


Alignment Details
Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 56076640 - 56076521
Alignment:
Q  108 gtaggtgttaggtactgcaactcggcataggcaaaaacaggaaatctgtaatttgttgtttctcatatcatatccgtctcgactgtacatacaggtatgt 207  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56076640 gtaggtgttagttagtgcagctcggcataggcaaaaacaggaaatctgtaatttgttgtttctcatatcatatccgtctcgactgtacatacaggtatgt 56076541  T
Q  208 ttcacaacacaactactttc 227  Q
    ||||||||||||||||||||    
T  56076540 ttcacaacacaactactttc 56076521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 229658 - 229704
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  229658 attttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaaac 229704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 12593524 - 12593566
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  12593524 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 12593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 34789884 - 34789926
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34789884 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 34789926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 35644063 - 35644105
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  35644063 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 35644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40160589 - 40160635
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  40160589 attttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaac 40160635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 46737156 - 46737198
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  46737156 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 46737198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 54440616 - 54440574
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  54440616 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 54440574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 14439873 - 14439828
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaact 48  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  14439873 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaact 14439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21034282 - 21034238
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  21034282 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 21034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28465580 - 28465624
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  28465580 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28465624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34789429 - 34789385
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  34789429 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 34789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 229208 - 229162
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  229208 attttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaac 229162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 19528914 - 19528872
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  19528914 tttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaa 19528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 21034738 - 21034780
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  21034738 tttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 21034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 24851967 - 24852009
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  24851967 tttcgtgagttggtcaaaatgcaaggaccaaaagtataattaa 24852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 33689870 - 33689832
Alignment:
Q  7 gtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33689870 gtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 33689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33777679 - 33777633
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  33777679 attttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaaac 33777633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34807161 - 34807119
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  34807161 tttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 34807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 41608916 - 41608958
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  41608916 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 41608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 44219420 - 44219378
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  44219420 tttcgtgagttggttaaaatacgaggaccaaaagtgtaattaa 44219378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 55677459 - 55677501
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  55677459 tttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 41114203 - 41114158
Alignment:
Q  2 ttttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||    
T  41114203 ttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaaac 41114158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45839050 - 45839099
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacttttt 52  Q
    ||||||||||||||||||||   |||||||||||||||||||||| ||||    
T  45839050 tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaaacctttt 45839099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12593071 - 12593027
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||    
T  12593071 attttcgtgagttggtcaaactggtaggaccaaaagtgtaattaa 12593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17504021 - 17503977
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||    
T  17504021 attttcgtgagatggtcaaaatgcgaggaccaacagtataattaa 17503977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23986567 - 23986523
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||    
T  23986567 attttcgtgagctggtcaaaatgtgaggaccaaaagtgaaattaa 23986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24336262 - 24336306
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||    
T  24336262 attttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaa 24336306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24851363 - 24851319
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  24851363 attttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 24851319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 36168374 - 36168330
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||    
T  36168374 tttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaaac 36168330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36168830 - 36168874
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  36168830 attttcgtgagttggtcaaaatggtaggaccaagagtgtaattaa 36168874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 41608419 - 41608375
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||    
T  41608419 tttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaaac 41608375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51310004 - 51310048
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  51310004 attttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaa 51310048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 56077823 - 56077867
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||||||||| |||||||||    
T  56077823 attttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 56077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6616719 - 6616673
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||| ||||||||  || |||||||||||||||||||    
T  6616719 attttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaaac 6616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 4220059 - 4220103
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  4220059 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 4220103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14440327 - 14440371
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||| ||||||||||||||  |||||||||||| |||||||    
T  14440327 attttcgtaagttggtcaaaatggtaggaccaaaagtataattaa 14440371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20958357 - 20958401
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| || |||||| ||||||| ||||||||||||||    
T  20958357 attttcgtgagtaggccaaaatacgaggactaaaagtgtaattaa 20958401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24335808 - 24335764
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||| |||| | |||||||||||||    
T  24335808 attttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaa 24335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26974330 - 26974286
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| || ||||||  ||||||||||||||||||||    
T  26974330 attttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaa 26974286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 30598023 - 30598059
Alignment:
Q  6 cgtgagttggtcaaaatgcgaggaccaaaagtgtaat 42  Q
    ||||||||||||||||  |||||||||||||||||||    
T  30598023 cgtgagttggtcaaaacacgaggaccaaaagtgtaat 30598059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35193801 - 35193845
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |  ||||||||| ||||||||||||||||||||    
T  35193801 attttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaa 35193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 37336649 - 37336681
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaa 35  Q
    |||||||||||||| ||||||||||||||||||    
T  37336649 tttcgtgagttggttaaaatgcgaggaccaaaa 37336681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54441068 - 54441112
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| || ||||||||  ||||||||||||||||||||    
T  54441068 attttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaa 54441112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 54995567 - 54995611
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  54995567 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 54995611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28877388 - 28877434
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28877388 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 28877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35427311 - 35427355
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35427311 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 35427355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42035819 - 42035775
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  42035819 attttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42035775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18428261 - 18428312
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacttttt 52  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  18428261 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaacctttt 18428312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 15255898 - 15255856
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  15255898 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 15255856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 18050092 - 18050138
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaactt 49  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  18050092 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaactt 18050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 28254927 - 28254969
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  28254927 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 28254969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5730864 - 5730820
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  5730864 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7911115 - 7911159
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  7911115 attttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaa 7911159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9797226 - 9797270
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  9797226 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 599577 - 599535
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  599577 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 599535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 9796767 - 9796729
Alignment:
Q  7 gtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9796767 gtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18049637 - 18049595
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatt 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  18049637 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28876950 - 28876904
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||    
T  28876950 attttcgtgagctgatcaaaatgcgaggaccaaaagtgtaaataaac 28876904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35426889 - 35426843
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||    
T  35426889 attttcgtgagttggtcaaaatggtaggactaaaagtgtaattaaac 35426843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 599997 - 600041
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||    
T  599997 attttcgttagttggtcaaaatggtaggaccaaaagtgtaattaa 600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2208761 - 2208717
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  2208761 attttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 2208717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7910663 - 7910619
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||    
T  7910663 attttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaa 7910619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15256330 - 15256374
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||    
T  15256330 attttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 15256374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16578595 - 16578639
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||    
T  16578595 attttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaa 16578639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28254472 - 28254428
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||    
T  28254472 attttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 28254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41260318 - 41260274
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||    
T  41260318 attttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 41260274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 9930157 - 9930199
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  9930157 tttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaa 9930199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 16578153 - 16578111
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| || ||||||| |||||||||    
T  16578153 tttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaa 16578111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18805211 - 18805165
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||| | ||||||||||  |||||||||||||||||||||    
T  18805211 attttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaaac 18805165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 33742967 - 33742925
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||||||  ||||||||||||||||||||||    
T  33742967 tttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 33742925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35694377 - 35694423
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||||||    
T  35694377 atttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaaac 35694423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 10046697 - 10046668
Alignment:
Q  16 tcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||||||||||    
T  10046697 tcaaaatgcgaggaccaaaagtgtaattaa 10046668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 33328203 - 33328159
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  33328203 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 33328159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34799126 - 34799082
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||||||||||||||||  | ||||||||||||||||||    
T  34799126 attttcatgagttggtcaaaatggtatgaccaaaagtgtaattaa 34799082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35693915 - 35693871
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||| | ||||||||||||| |||| |||||||||||||||    
T  35693915 attttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaa 35693871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4966863 - 4966813
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaactttt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4966863 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaattttt 4966813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38900691 - 38900648
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38900691 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15029808 - 15029852
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  15029808 attttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaa 15029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41834558 - 41834602
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  41834558 attttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 41834602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4967270 - 4967314
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  4967270 atttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 4967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15115591 - 15115635
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  15115591 attttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaa 15115635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16753069 - 16753113
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||| |||||||| |||||||||    
T  16753069 attttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaa 16753113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17260719 - 17260763
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  17260719 attttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaa 17260763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22651810 - 22651854
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  22651810 attttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaa 22651854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28290143 - 28290187
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  28290143 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28290187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 28289729 - 28289687
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  28289729 tttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 28289687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 32697727 - 32697769
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  32697727 tttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaa 32697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 8419122 - 8419163
Alignment:
Q  4 ttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  8419122 ttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 8419163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10721833 - 10721789
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||    
T  10721833 attttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaa 10721789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16752629 - 16752585
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||    
T  16752629 attttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaa 16752585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27307108 - 27307064
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| | |||||||||||||||||| |||||||||||||||||    
T  27307108 attttcataagttggtcaaaatgcgagaaccaaaagtgtaattaa 27307064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 14340911 - 14340954
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||||||||||||||||||||| || ||||||| ||||||||||    
T  14340911 tttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaaa 14340954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 164236 - 164194
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||||||  ||||||||||||||||||||||    
T  164236 tttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 164194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20266414 - 20266460
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||| || |||||||||| ||||||||||||||| ||||||||    
T  20266414 attttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaaac 20266460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 24362336 - 24362378
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  24362336 tttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaa 24362378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14340445 - 14340400
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||||||||||||| ||||||||  |||||||||| ||||||||||    
T  14340445 attttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaaa 14340400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 21371202 - 21371239
Alignment:
Q  8 tgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  21371202 tgagttggtcaaaatgcaaggatcaaaagtgtaattaa 21371239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 5818974 - 5818930
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  5818974 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 5818930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 15372373 - 15372417
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  15372373 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 15372417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18149780 - 18149736
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||    
T  18149780 attttcgtgagttggtccaaatggtaggatcaaaagtgtaattaa 18149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27307559 - 27307603
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||  ||||||||||||| ||||||||||| |||||||    
T  27307559 attttcgtgaactggtcaaaatgcggggaccaaaagtctaattaa 27307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22370643 - 22370598
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22370643 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 22370598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 52375830 - 52375874
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  52375830 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 52375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40838699 - 40838653
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  40838699 attttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaac 40838653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 330335 - 330379
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  330335 attttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaa 330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36701153 - 36701109
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  36701153 attttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaa 36701109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36701595 - 36701639
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  36701595 attttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 36701639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40275140 - 40275096
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  40275140 attttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49407843 - 49407799
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  49407843 attttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 49407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 52237316 - 52237360
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  52237316 attttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 52237360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 49951593 - 49951542
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacttttt 52  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  49951593 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaacctttt 49951542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 14654690 - 14654732
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  14654690 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 14654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27199749 - 27199703
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27199749 attttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaaac 27199703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 40275594 - 40275636
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  40275594 tttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40839151 - 40839197
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  40839151 attttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaaac 40839197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44676971 - 44677017
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  44676971 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 44677017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 51828002 - 51827960
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  51828002 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 51827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2051342 - 2051298
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  2051342 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 2051298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 16689403 - 16689359
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  16689403 tttcgtgagttggtcaaaatgctaggaccaaaactgtaattaaac 16689359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25534937 - 25534893
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  25534937 attttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaa 25534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27200190 - 27200234
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  27200190 attttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 27200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33412653 - 33412697
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| || ||||||||||||||||||||||||||||||    
T  33412653 attttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaa 33412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37075733 - 37075689
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  37075733 attttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaa 37075689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47431743 - 47431699
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  47431743 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 47431699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49408280 - 49408324
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  49408280 attttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaa 49408324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50901026 - 50901070
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||    
T  50901026 atttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 50901070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 55390096 - 55390140
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  55390096 attttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaa 55390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37076173 - 37076224
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacttttt 52  Q
    ||||||||||| || |||||||||||||||||||| ||||||||| ||||||    
T  37076173 attttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagcttttt 37076224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55389652 - 55389609
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 44  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||    
T  55389652 attttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 32730428 - 32730390
Alignment:
Q  9 gagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  32730428 gagttggtcaaaatgcaaggaccaaaagtgtaattaaac 32730390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 41998729 - 41998771
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  41998729 tttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 41998771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 46013467 - 46013425
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  46013467 tttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 46013425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 49720416 - 49720374
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  49720416 tttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 49720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 49952047 - 49952089
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  49952047 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 49952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51473355 - 51473401
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  51473355 attttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaaac 51473401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43678339 - 43678298
Alignment:
Q  4 ttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  43678339 ttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 43678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 43678786 - 43678827
Alignment:
Q  4 ttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  43678786 ttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 43678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2044318 - 2044274
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||    
T  2044318 attttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaa 2044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 5137025 - 5136981
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  5137025 tttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaac 5136981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16701291 - 16701335
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||||||||| |||||||||    
T  16701291 attttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 16701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 25612477 - 25612521
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||    
T  25612477 tttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaaac 25612521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30513769 - 30513725
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||    
T  30513769 attttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaa 30513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38535356 - 38535312
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||    
T  38535356 attttcctgagttggtcaaaatggtaggaccaaaagtgtaattaa 38535312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41998276 - 41998232
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||    
T  41998276 attttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaa 41998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49720860 - 49720904
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||   ||||||||||||||||||||    
T  49720860 attttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 49720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51828457 - 51828501
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||    
T  51828457 attttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaa 51828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52236863 - 52236819
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||    
T  52236863 attttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaa 52236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52375374 - 52375330
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||    
T  52375374 attttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaa 52375330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55192165 - 55192121
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  55192165 attttcgtgagctggtcaaaatgcggggactaaaagtgtaattaa 55192121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 329893 - 329850
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 44  Q
    |||||||||||||||||||||||  || ||||||||||||||||    
T  329893 attttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43222889 - 43222940
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacttttt 52  Q
    ||||||||| | | ||||||||||||||||||||||||| ||||| ||||||    
T  43222889 attttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaagcttttt 43222940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 23644507 - 23644465
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  23644507 tttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaa 23644465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30104527 - 30104485
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||||||  ||||||||||||||||||||||    
T  30104527 tttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 30104485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 34105152 - 34105190
Alignment:
Q  4 ttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 42  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  34105152 ttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 39010116 - 39010078
Alignment:
Q  7 gtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  39010116 gtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 39010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 44676517 - 44676475
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  44676517 tttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 44676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 51472900 - 51472858
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||| ||||||||||||||||| |||||||||||| |||||||    
T  51472900 tttcatgagttggtcaaaatgcaaggaccaaaagtataattaa 51472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 51828584 - 51828542
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| | ||||||||||||| ||||||||||||||||||||    
T  51828584 tttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaa 51828542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14654246 - 14654202
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  || | |||||||||||||||    
T  14654246 attttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaa 14654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43222437 - 43222393
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||    
T  43222437 attttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaa 43222393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43973488 - 43973444
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| || |||||  ||||||||||||||||||||||    
T  43973488 attttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaa 43973444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50662911 - 50662955
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||  |||||||||||| |||||||    
T  50662911 attttcgtgagtttgtcaaaatggtaggaccaaaagtataattaa 50662955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17641868 - 17641913
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17641868 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 17641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50304486 - 50304433
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaactttttct 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  50304486 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagttttttct 50304433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44954725 - 44954775
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaactttt 51  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  44954725 attttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagctttt 44954775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 10278593 - 10278551
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  10278593 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 10278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 29438975 - 29438933
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  29438975 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 29438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39485112 - 39485066
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  39485112 attttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaaac 39485066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45048634 - 45048680
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  45048634 attttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaaac 45048680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45048202 - 45048157
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  45048202 attttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaaa 45048157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2867958 - 2867914
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||| |||||||| |||||||||    
T  2867958 attttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaa 2867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30786818 - 30786774
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  30786818 attttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaa 30786774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37505114 - 37505070
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  37505114 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 37505070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50926740 - 50926784
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  50926740 attttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaa 50926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23526705 - 23526654
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacttttt 52  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||    
T  23526705 attttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagcttttt 23526654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25274803 - 25274760
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 44  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  25274803 attttcgtgagctggtcaaaatgcgaggaccaaaagtgcaatta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 1837550 - 1837508
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  1837550 tttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 1837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 44802672 - 44802714
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  44802672 tttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 44802714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2868207 - 2868251
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||    
T  2868207 attttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaa 2868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4080066 - 4080026
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatt 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  4080066 tttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8229684 - 8229640
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||    
T  8229684 attttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaa 8229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9992654 - 9992698
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||    
T  9992654 attttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 9992698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17088193 - 17088149
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  17088193 attttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaa 17088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17088638 - 17088682
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| || |||||||| |||||||||||||||||||||    
T  17088638 attttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaa 17088682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29021364 - 29021408
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||    
T  29021364 attttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaa 29021408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34555881 - 34555925
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||    
T  34555881 attttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 34555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 37421205 - 37421161
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||    
T  37421205 tttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaaac 37421161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44291348 - 44291304
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||    
T  44291348 attttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaa 44291304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50926277 - 50926233
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||    
T  50926277 attttcgtgagctggtcaaaatgggaggaccaaaactgtaattaa 50926233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 39843525 - 39843564
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 42  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  39843525 tttcgtgagttggtctaaatgcgaggaccgaaagtgtaat 39843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8230140 - 8230186
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| | |||||||||||||| ||||||| |||||||||||    
T  8230140 attttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaaac 8230186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 16298727 - 16298685
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||| |||||| |||||||||    
T  16298727 tttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaa 16298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21938610 - 21938564
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||    
T  21938610 attttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaaac 21938564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 23340228 - 23340186
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| | || |||||||||||||||    
T  23340228 tttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaa 23340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34555424 - 34555382
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||    
T  34555424 tttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaa 34555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37421444 - 37421490
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  | ||| ||||||||||||||||    
T  37421444 attttcgtgagttggtcaaaatggtatgactaaaagtgtaattaaac 37421490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 44582102 - 44582060
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| ||||||||||||||  ||||||||||||||||||||    
T  44582102 tttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaa 44582060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50419437 - 50419391
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||| ||||||||||  |||||||||||||||||||| ||||||||    
T  50419437 atttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaaac 50419391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 50419761 - 50419803
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||    
T  50419761 tttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaa 50419803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1744375 - 1744331
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||| |||||||| |||||||| ||| ||||||||||||||||||    
T  1744375 atttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaa 1744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 5963078 - 5963122
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  5963078 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 5963122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10279046 - 10279090
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||| |  |||| |||||||||||||||    
T  10279046 attttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaa 10279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 15173141 - 15173097
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  15173141 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 15173097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44582558 - 44582602
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| ||||||||  || |||||||||||||||||    
T  44582558 attttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaa 44582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44954273 - 44954229
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| | |||| |||| |||||||||    
T  44954273 attttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 9330296 - 9330344
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaactttt 51  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9330296 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaaactttt 9330344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42192742 - 42192786
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42192742 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42192287 - 42192243
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  42192287 attttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44220144 - 44220188
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  44220144 attttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaa 44220188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 6949945 - 6949987
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  6949945 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 6949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20495240 - 20495194
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  20495240 attttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaaac 20495194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 25336101 - 25336143
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  25336101 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 25336143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 38007995 - 38007953
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  38007995 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 38007953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 649836 - 649880
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  649836 attttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5560098 - 5560054
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  5560098 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5560054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11539684 - 11539640
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  11539684 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 11539640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11540137 - 11540181
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  11540137 attttcgtgagttggtcaaaatgcgatgaccaaaagtataattaa 11540181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14942345 - 14942389
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  14942345 attttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 14942389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24140173 - 24140217
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  24140173 attttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaa 24140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28143528 - 28143572
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||    
T  28143528 attttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaa 28143572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31797276 - 31797320
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  31797276 attttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaa 31797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33921111 - 33921155
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  33921111 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 33921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38008450 - 38008494
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  38008450 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 38008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 3822966 - 3822923
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  3822966 tttcatgagttggttaaaatgcgaggaccaaaagtgtaattaaa 3822923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 4355800 - 4355758
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  4355800 tttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaa 4355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 16953435 - 16953477
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  16953435 tttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaa 16953477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 20128238 - 20128280
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  20128238 tttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaa 20128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 32418204 - 32418162
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  32418204 tttcgtgagttggtcaaaatgcaaggaccataagtgtaattaa 32418162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 33920657 - 33920615
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  33920657 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 63004 - 62960
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  63004 attttcgtgagttggtcaaaatggaaggaccataagtgtaattaa 62960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 3824209 - 3824253
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  3824209 tttcgtgagttggttaaaatgcgatgaccaaaagtataattaaac 3824253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 4356259 - 4356299
Alignment:
Q  5 tcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  4356259 tcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 4356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4809378 - 4809422
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||    
T  4809378 attttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaa 4809422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 15550718 - 15550674
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||| ||||| |||| |||||||||||||||||    
T  15550718 tttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaaac 15550674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16952982 - 16952938
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  16952982 attttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 16952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17060953 - 17060909
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  17060953 attttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 17060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20127783 - 20127739
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  20127783 attttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaa 20127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 63463 - 63509
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||| | |||||||||| | |||||||||    
T  63463 attttcgtgagttggtcaaaatacaaggaccaaaaatataattaaac 63509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 649572 - 649530
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  649572 tttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaa 649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9329959 - 9329913
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||| ||||||||||||||||   ||||||||||||||||||||||    
T  9329959 atttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaaac 9329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13315540 - 13315494
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  13315540 attttcatgagttggtcaaaatggtaggacaaaaagtgtaattaaac 13315494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15551174 - 15551220
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||    
T  15551174 atttttgtgagttggtcaaaatggtagggccaaaagtgtaattaaac 15551220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 20440531 - 20440573
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  20440531 tttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 20440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 20444794 - 20444752
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  20444794 tttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 20444752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 43160054 - 43160012
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||| |||||||||| |||||||||    
T  43160054 tttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 43216210 - 43216252
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||| || ||||| ||||||||||||||    
T  43216210 tttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaa 43216252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 16175851 - 16175892
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 44  Q
    |||||||||||||| ||||||  |||||||||||||||||||    
T  16175851 tttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6949498 - 6949454
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||  |||||||||| |||||||||    
T  6949498 attttcgtgagttagtcaaaatgataggaccaaaaatgtaattaa 6949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 11090566 - 11090522
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  11090566 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 11090522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35779755 - 35779711
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||  |||||||  ||||||||||||||||||||||    
T  35779755 attttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaa 35779711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 40027640 - 40027684
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  40027640 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 40027684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 40815845 - 40815889
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  40815845 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 40815889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43160510 - 43160554
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||  |||||| |||||||||||||    
T  43160510 attttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaa 43160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44219691 - 44219647
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||| |||||||| ||||||||  ||||||||||||||||||||    
T  44219691 atttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaa 44219647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5334318 - 5334362
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  5334318 attttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 5334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34594630 - 34594586
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  34594630 attttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaa 34594586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34595271 - 34595315
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  34595271 attttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 34595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 787285 - 787331
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||    
T  787285 attttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaac 787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 27245248 - 27245206
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  27245248 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 27245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 39388769 - 39388811
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  39388769 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 39388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5745686 - 5745641
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  5745686 attttcgtgagttggtcaaaatgataggaccaaaagtgtaattaaa 5745641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25637697 - 25637742
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  25637697 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 25637742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2758197 - 2758241
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  2758197 attttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaa 2758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5333927 - 5333883
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  5333927 attttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 5333883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7732986 - 7733030
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  7732986 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 7733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9181579 - 9181535
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  9181579 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15712412 - 15712368
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  15712412 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 15712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16917760 - 16917716
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  16917760 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 16917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49064081 - 49064037
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  49064081 attttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaa 49064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 5746141 - 5746183
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  5746141 tttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaa 5746183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 16081800 - 16081842
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  16081800 tttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaa 16081842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 24929809 - 24929851
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  24929809 tttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 24929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35160700 - 35160654
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||    
T  35160700 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaaataaac 35160654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40669707 - 40669753
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  40669707 attttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaaac 40669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 48247632 - 48247590
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  48247632 tttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 48247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 786829 - 786785
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  786829 attttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 786785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 5184473 - 5184429
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||| | |||||||||| |||||||||||    
T  5184473 tttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaaac 5184429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9393783 - 9393739
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| || |||||||||||||| |||||||||||||||    
T  9393783 attttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaa 9393739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 26026362 - 26026318
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||    
T  26026362 tttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaac 26026318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28687640 - 28687596
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  28687640 attttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaa 28687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 28688000 - 28688043
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  28688000 tttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaaac 28688043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 35161306 - 35161342
Alignment:
Q  6 cgtgagttggtcaaaatgcgaggaccaaaagtgtaat 42  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35161306 cgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35579384 - 35579428
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| || |||||||||||||| |||||||||||||||    
T  35579384 attttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaa 35579428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39136733 - 39136689
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||    
T  39136733 attttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 39136689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48248091 - 48248135
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||    
T  48248091 atttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 48248135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 7732533 - 7732491
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||| |||||||||| |||||||||    
T  7732533 tttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 7732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 9181913 - 9181955
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||| ||||||||||||| |||| |||||||||||||||    
T  9181913 tttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaa 9181955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 25637242 - 25637200
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  25637242 tttcatgagttggtcaatatgcaaggaccaaaagtgtaattaa 25637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26048447 - 26048489
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||| || |||| |||||||||||||||    
T  26048447 tttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaa 26048489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 11973911 - 11973948
Alignment:
Q  11 gttggtcaaaatgcgaggaccaaaagtgtaattaaact 48  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  11973911 gttggtcaaaatgcaaggaccaaaaatgtaattaaact 11973948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35578946 - 35578893
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaactttttct 54  Q
    ||||| ||||| |||||||||||| | ||||||||||||||||||  |||||||    
T  35578946 atttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaatttttttct 35578893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9394229 - 9394272
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||    
T  9394229 atttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaa 9394272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11971381 - 11971337
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||||  |||||||||||| |||||||    
T  11971381 attttcgtgagtaggtcaaaatggtaggaccaaaagtataattaa 11971337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 19830465 - 19830421
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  19830465 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaac 19830421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38160998 - 38160954
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| || |||||  ||||||||||||||||||||||    
T  38160998 attttcgtgagtaggccaaaacccgaggaccaaaagtgtaattaa 38160954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39137032 - 39137076
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||  ||||||||| |||||| |||||||||||||||    
T  39137032 attttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaa 39137076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 45815379 - 45815347
Alignment:
Q  13 tggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||| ||||||||||||||||||||    
T  45815379 tggtcaaaatgcaaggaccaaaagtgtaattaa 45815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22534223 - 22534267
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  22534223 attttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaa 22534267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 5120970 - 5121012
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  5120970 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 5121012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31242853 - 31242807
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  31242853 attttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaaac 31242807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31574226 - 31574268
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31574226 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 31574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 25468894 - 25468850
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  25468894 tttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaaac 25468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35163686 - 35163730
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  35163686 attttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaa 35163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30250766 - 30250724
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  30250766 tttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 30250724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31073643 - 31073685
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  31073643 tttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 31073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35163231 - 35163185
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  35163231 atttttgtgagctggtcaaaatgcgaggactaaaagtgtaattaaac 35163185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25472512 - 25472556
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  25472512 attttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 25472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31573767 - 31573723
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  31573767 attttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 31573723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32836495 - 32836539
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  32836495 attttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaa 32836539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 10900430 - 10900472
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  10900430 tttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaa 10900472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 28472682 - 28472640
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  28472682 tttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 28472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 29859871 - 29859829
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  29859871 tttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 29859829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 18504964 - 18504919
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaact 48  Q
    |||||||||| || |||||  |||||||||||||||||||||||||    
T  18504964 tttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaact 18504919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24640684 - 24640729
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 46  Q
    |||||||||||||| ||||||||  |||||||||||| ||||||||    
T  24640684 attttcgtgagttgatcaaaatggtaggaccaaaagtataattaaa 24640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 32836053 - 32836008
Alignment:
Q  2 ttttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||| ||||| |||||||||||| |||| |||||||||||||||||    
T  32836053 tttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaaac 32836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 29891591 - 29891627
Alignment:
Q  9 gagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||  ||||||||||||||||||||    
T  29891591 gagttggtcaaaatggtaggaccaaaagtgtaattaa 29891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46313 - 46269
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||    
T  46313 attttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaa 46269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46767 - 46811
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  46767 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 46811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 205866 - 205910
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  205866 attttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaa 205910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 210836 - 210880
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  210836 attttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaa 210880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 204971 - 204929
Alignment:
Q  5 tcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||||| |||||||||| | ||||||||||||||||||||||    
T  204971 tcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaac 204929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 564 - 608
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||    
T  564 attttcgtgagctcgtcaaaatgcgaggatcaaaagtgtaattaa 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 6897 - 6941
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||| | ||||||||||||| ||||||||||| ||||||||||    
T  6897 tttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaaac 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 6915 - 6959
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    |||||| | ||||||||||||| ||||||||||| ||||||||||    
T  6915 tttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaaac 6959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 6581 - 6625
Alignment:
Q  3 tttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 47  Q
    ||||| |||||||||||||||||||||| |||||||  |||||||    
T  6581 tttcgcgagttggtcaaaatgcgaggactaaaagtgctattaaac 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15160 - 15116
Alignment:
Q  1 attttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 45  Q
    ||||||| ||| |||||||||||||| |||||||||| |||||||    
T  15160 attttcgcgagctggtcaaaatgcgatgaccaaaagtataattaa 15116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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