View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12741_low_13 (Length: 251)

Name: NF12741_low_13
Description: NF12741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12741_low_13
NF12741_low_13
[»] chr5 (50 HSPs)
chr5 (1-243)||(28494787-28495029)
chr5 (56-234)||(10721784-10721962)
chr5 (59-234)||(27307062-27307237)
chr5 (59-216)||(41834446-41834604)
chr5 (77-234)||(13557011-13557168)
chr5 (59-204)||(16752583-16752728)
chr5 (71-216)||(32305831-32305976)
chr5 (59-204)||(28495240-28495376)
chr5 (60-234)||(16752939-16753114)
chr5 (61-195)||(20266323-20266458)
chr5 (59-216)||(27307445-27307605)
chr5 (59-172)||(4967201-4967316)
chr5 (60-199)||(22651347-22651487)
chr5 (61-215)||(4966819-4966973)
chr5 (59-216)||(28290031-28290189)
chr5 (84-185)||(17260352-17260454)
chr5 (62-197)||(38900648-38900784)
chr5 (59-216)||(15029696-15029854)
chr5 (59-216)||(21371083-21371241)
chr5 (59-216)||(28289685-28289843)
chr5 (57-216)||(8419008-8419167)
chr5 (53-216)||(15115482-15115643)
chr5 (59-216)||(19291357-19291516)
chr5 (59-154)||(22651760-22651856)
chr5 (60-194)||(28595182-28595316)
chr5 (61-216)||(14340794-14340953)
chr5 (56-216)||(32697610-32697774)
chr5 (59-172)||(18149734-18149847)
chr5 (156-234)||(164289-164368)
chr5 (145-234)||(14215329-14215419)
chr5 (59-199)||(18150127-18150269)
chr5 (145-234)||(2864842-2864932)
chr5 (145-234)||(5819017-5819107)
chr5 (157-234)||(8461298-8461376)
chr5 (59-168)||(38901076-38901185)
chr5 (145-216)||(25000474-25000546)
chr5 (156-234)||(15709336-15709415)
chr5 (60-216)||(39083361-39083519)
chr5 (117-216)||(5161641-5161742)
chr5 (126-196)||(6018382-6018452)
chr5 (145-234)||(8647805-8647895)
chr5 (59-133)||(17260691-17260765)
chr5 (145-234)||(18183058-18183148)
chr5 (157-234)||(29454840-29454918)
chr5 (69-134)||(20260936-20261001)
chr5 (168-234)||(24331672-24331739)
chr5 (145-234)||(19359503-19359593)
chr5 (121-193)||(14464927-14465000)
chr5 (59-177)||(5161995-5162114)
chr5 (145-216)||(16018972-16019044)
[»] chr3 (90 HSPs)
chr3 (54-210)||(27200085-27200241)
chr3 (59-216)||(49407797-49407954)
chr3 (60-196)||(36701503-36701640)
chr3 (59-204)||(49408182-49408326)
chr3 (59-204)||(50900927-50901072)
chr3 (61-232)||(2323382-2323553)
chr3 (60-234)||(50900534-50900709)
chr3 (59-216)||(55192119-55192276)
chr3 (61-243)||(8873694-8873876)
chr3 (59-216)||(36701107-36701267)
chr3 (61-216)||(40839039-40839195)
chr3 (59-229)||(37076048-37076219)
chr3 (61-201)||(27199705-27199846)
chr3 (59-216)||(40275094-40275254)
chr3 (60-216)||(52236818-52236975)
chr3 (60-216)||(52237204-52237361)
chr3 (61-216)||(40838655-40838811)
chr3 (53-216)||(52375718-52375882)
chr3 (62-216)||(55389609-55389764)
chr3 (59-216)||(38535310-38535468)
chr3 (59-216)||(40275481-40275638)
chr3 (59-216)||(52375328-52375486)
chr3 (59-216)||(25534891-25535050)
chr3 (61-216)||(44676859-44677015)
chr3 (55-209)||(37075683-37075840)
chr3 (59-197)||(43222391-43222530)
chr3 (59-216)||(43222776-43222935)
chr3 (59-216)||(47431697-47431856)
chr3 (59-216)||(50662799-50662957)
chr3 (59-216)||(51827958-51828116)
chr3 (59-216)||(55389984-55390142)
chr3 (83-216)||(37847207-37847340)
chr3 (59-199)||(46013423-46013564)
chr3 (59-216)||(14654578-14654734)
chr3 (59-216)||(51828344-51828503)
chr3 (59-216)||(330223-330381)
chr3 (59-216)||(49951933-49952091)
chr3 (58-216)||(46013809-46013969)
chr3 (61-199)||(49951549-49951688)
chr3 (53-234)||(5137348-5137531)
chr3 (59-189)||(41998643-41998773)
chr3 (59-216)||(43678296-43678454)
chr3 (59-216)||(44676473-44676631)
chr3 (59-216)||(51472856-51473014)
chr3 (59-199)||(2044272-2044413)
chr3 (59-191)||(39010076-39010209)
chr3 (59-191)||(49720773-49720906)
chr3 (61-216)||(51473242-51473399)
chr3 (59-199)||(12140938-12141079)
chr3 (59-216)||(51828540-51828699)
chr3 (61-216)||(8874073-8874229)
chr3 (59-216)||(49720372-49720530)
chr3 (61-204)||(22370599-22370744)
chr3 (62-177)||(329850-329965)
chr3 (61-172)||(16689361-16689472)
chr3 (59-216)||(41998230-41998389)
chr3 (60-216)||(32730776-32730933)
chr3 (59-216)||(34104639-34104796)
chr3 (59-234)||(37727297-37727474)
chr3 (59-234)||(27393662-27393839)
chr3 (61-216)||(32730392-32730548)
chr3 (59-147)||(33412610-33412699)
chr3 (59-181)||(12141113-12141236)
chr3 (59-199)||(16701193-16701337)
chr3 (114-199)||(38535699-38535785)
chr3 (59-216)||(43678671-43678829)
chr3 (59-234)||(4275731-4275908)
chr3 (145-234)||(26837448-26837538)
chr3 (145-234)||(31778741-31778831)
chr3 (145-234)||(43973807-43973897)
chr3 (64-216)||(34105035-34105190)
chr3 (59-234)||(39555579-39555756)
chr3 (59-232)||(25853235-25853410)
chr3 (59-216)||(51828927-51829085)
chr3 (59-172)||(14654200-14654313)
chr3 (145-234)||(22424902-22424992)
chr3 (145-234)||(24300644-24300734)
chr3 (145-234)||(29801783-29801873)
chr3 (60-216)||(30513724-30513881)
chr3 (145-234)||(41047066-41047156)
chr3 (149-185)||(33412425-33412461)
chr3 (59-134)||(2051296-2051371)
chr3 (59-196)||(23228414-23228551)
chr3 (61-216)||(5136983-5137139)
chr3 (145-233)||(26274655-26274744)
chr3 (145-204)||(20840958-20841018)
chr3 (59-216)||(30098148-30098307)
chr3 (145-234)||(17464579-17464669)
chr3 (145-232)||(23644834-23644922)
chr3 (59-201)||(43973442-43973585)
[»] chr2 (61 HSPs)
chr2 (59-215)||(31797166-31797322)
chr2 (54-216)||(28143417-28143579)
chr2 (59-204)||(14942243-14942391)
chr2 (59-216)||(42192241-42192399)
chr2 (58-216)||(16953321-16953480)
chr2 (59-216)||(4355756-4355914)
chr2 (61-216)||(33920615-33920771)
chr2 (59-216)||(38007951-38008110)
chr2 (59-216)||(42192629-42192788)
chr2 (59-216)||(11540025-11540183)
chr2 (59-216)||(44219645-44219803)
chr2 (59-199)||(38008355-38008496)
chr2 (62-216)||(16175736-16175892)
chr2 (59-216)||(43216096-43216254)
chr2 (61-216)||(43160012-43160169)
chr2 (54-216)||(4356143-4356306)
chr2 (59-216)||(62958-63116)
chr2 (59-216)||(20128124-20128282)
chr2 (61-216)||(15550676-15550833)
chr2 (68-198)||(2190480-2190612)
chr2 (59-216)||(11539638-11539797)
chr2 (59-216)||(20127737-20127896)
chr2 (59-197)||(44220049-44220190)
chr2 (59-199)||(649528-649669)
chr2 (61-188)||(9330209-9330338)
chr2 (54-216)||(13399807-13399969)
chr2 (145-234)||(18450918-18451008)
chr2 (113-216)||(4808934-4809038)
chr2 (113-216)||(13399477-13399581)
chr2 (61-165)||(20495196-20495301)
chr2 (59-216)||(6949452-6949611)
chr2 (61-199)||(15551078-15551218)
chr2 (59-216)||(32418160-32418316)
chr2 (59-216)||(33920998-33921157)
chr2 (59-216)||(43160397-43160556)
chr2 (61-216)||(13315496-13315656)
chr2 (77-198)||(5037103-5037225)
chr2 (59-168)||(5560052-5560161)
chr2 (145-233)||(7446714-7446803)
chr2 (59-216)||(4809266-4809424)
chr2 (59-200)||(32418549-32418691)
chr2 (59-177)||(6949869-6949989)
chr2 (54-169)||(25336034-25336150)
chr2 (138-216)||(5560937-5561015)
chr2 (59-216)||(16952936-16953096)
chr2 (59-216)||(17060907-17061067)
chr2 (145-234)||(40815433-40815523)
chr2 (54-216)||(24140066-24140224)
chr2 (156-234)||(8425453-8425532)
chr2 (156-234)||(43058700-43058779)
chr2 (59-234)||(11090887-11091064)
chr2 (145-234)||(40027507-40027597)
chr2 (61-197)||(3824114-3824251)
chr2 (60-140)||(649801-649881)
chr2 (59-204)||(28617011-28617158)
chr2 (156-234)||(3025830-3025909)
chr2 (145-231)||(22374695-22374782)
chr2 (154-216)||(43215805-43215868)
chr2 (117-166)||(5035922-5035972)
chr2 (142-216)||(14432227-14432301)
chr2 (145-232)||(239721-239809)
[»] chr1 (70 HSPs)
chr1 (48-204)||(45048535-45048691)
chr1 (59-216)||(44802558-44802716)
chr1 (60-199)||(44291303-44291445)
chr1 (59-210)||(23526659-23526811)
chr1 (53-216)||(17088527-17088690)
chr1 (54-199)||(29021268-29021415)
chr1 (59-204)||(17088147-17088297)
chr1 (61-216)||(39485068-39485223)
chr1 (61-204)||(45048158-45048301)
chr1 (60-195)||(23526938-23527074)
chr1 (59-216)||(2868095-2868253)
chr1 (59-216)||(44954613-44954771)
chr1 (60-196)||(50926232-50926371)
chr1 (61-216)||(8230028-8230184)
chr1 (59-209)||(30786772-30786924)
chr1 (84-196)||(44291718-44291831)
chr1 (61-216)||(17641751-17641912)
chr1 (59-216)||(1837506-1837664)
chr1 (86-204)||(9833551-9833670)
chr1 (59-196)||(48173749-48173888)
chr1 (59-196)||(50926648-50926786)
chr1 (59-216)||(37505068-37505227)
chr1 (60-216)||(44582059-44582216)
chr1 (59-199)||(29020881-29021022)
chr1 (59-189)||(16298683-16298814)
chr1 (52-216)||(9992148-9992314)
chr1 (59-216)||(9992542-9992700)
chr1 (60-216)||(10278550-10278708)
chr1 (62-171)||(25274760-25274869)
chr1 (59-157)||(39485485-39485583)
chr1 (61-216)||(21938566-21938722)
chr1 (59-216)||(8229638-8229799)
chr1 (59-196)||(29438931-29439070)
chr1 (60-147)||(50304441-50304529)
chr1 (59-216)||(52335897-52336055)
chr1 (60-169)||(2867913-2868022)
chr1 (59-198)||(443956-444096)
chr1 (60-216)||(34555767-34555926)
chr1 (61-216)||(37421163-37421321)
chr1 (59-204)||(34555380-34555528)
chr1 (59-234)||(15173461-15173637)
chr1 (117-216)||(16299069-16299169)
chr1 (61-216)||(44954229-44954385)
chr1 (59-183)||(36228794-36228921)
chr1 (71-198)||(36229385-36229513)
chr1 (59-216)||(23340184-23340342)
chr1 (59-216)||(37505455-37505612)
chr1 (145-234)||(39154387-39154477)
chr1 (54-216)||(6224693-6224858)
chr1 (84-199)||(48174119-48174242)
chr1 (63-216)||(4080026-4080180)
chr1 (145-234)||(4636338-4636428)
chr1 (145-234)||(33144005-33144095)
chr1 (59-234)||(50970279-50970456)
chr1 (59-216)||(10278937-10279092)
chr1 (101-216)||(17641408-17641524)
chr1 (145-216)||(29307327-29307399)
chr1 (61-196)||(50305189-50305328)
chr1 (59-204)||(9019360-9019507)
chr1 (61-171)||(50419393-50419504)
chr1 (145-234)||(15646280-15646370)
chr1 (145-234)||(17112369-17112459)
chr1 (145-234)||(17433582-17433672)
chr1 (145-234)||(21856130-21856220)
chr1 (145-234)||(29869986-29870076)
chr1 (56-234)||(5539814-5539994)
chr1 (55-191)||(29439333-29439471)
chr1 (60-216)||(44582444-44582603)
chr1 (145-206)||(26859147-26859209)
chr1 (53-157)||(30787245-30787349)
[»] chr7 (58 HSPs)
chr7 (58-200)||(35579289-35579431)
chr7 (60-243)||(9393738-9393921)
chr7 (61-216)||(35578902-35579057)
chr7 (59-216)||(34595159-34595317)
chr7 (59-234)||(4477703-4477879)
chr7 (104-204)||(45815465-45815566)
chr7 (59-191)||(49064035-49064167)
chr7 (59-216)||(786783-786942)
chr7 (55-216)||(26026314-26026477)
chr7 (59-216)||(9394118-9394274)
chr7 (56-199)||(39388671-39388816)
chr7 (59-216)||(7732489-7732647)
chr7 (60-216)||(9181534-9181691)
chr7 (59-196)||(39136687-39136824)
chr7 (60-180)||(5334243-5334363)
chr7 (61-216)||(25637585-25637741)
chr7 (60-199)||(33880622-33880762)
chr7 (59-216)||(48247978-48248137)
chr7 (59-216)||(2758085-2758243)
chr7 (59-216)||(16081686-16081844)
chr7 (59-181)||(45815345-45815466)
chr7 (61-216)||(28687886-28688041)
chr7 (59-213)||(7732877-7733032)
chr7 (59-169)||(5333881-5333991)
chr7 (59-216)||(16081300-16081458)
chr7 (61-216)||(5745642-5745798)
chr7 (54-216)||(25637193-25637357)
chr7 (59-204)||(27245204-27245351)
chr7 (59-216)||(15712366-15712524)
chr7 (59-169)||(16917714-16917824)
chr7 (59-216)||(24929690-24929853)
chr7 (59-199)||(28687594-28687735)
chr7 (60-189)||(34594585-34594714)
chr7 (61-216)||(14311674-14311830)
chr7 (59-216)||(26048334-26048491)
chr7 (61-216)||(33880972-33881132)
chr7 (145-234)||(34533879-34533969)
chr7 (64-199)||(35161205-35161342)
chr7 (59-156)||(39136980-39137078)
chr7 (59-216)||(9181796-9181957)
chr7 (152-216)||(32427407-32427471)
chr7 (59-216)||(48247588-48247750)
chr7 (145-234)||(19590892-19590982)
chr7 (145-234)||(37787134-37787224)
chr7 (59-233)||(2658840-2659016)
chr7 (59-150)||(49064173-49064265)
chr7 (61-147)||(787242-787329)
chr7 (59-216)||(5746026-5746185)
chr7 (145-234)||(32004702-32004792)
chr7 (61-216)||(11973789-11973945)
chr7 (61-216)||(26026705-26026861)
chr7 (60-196)||(14311317-14311455)
chr7 (145-231)||(38859011-38859098)
chr7 (145-234)||(19830787-19830876)
chr7 (60-204)||(27245603-27245748)
chr7 (145-234)||(29099938-29100028)
chr7 (59-234)||(35288904-35289081)
chr7 (59-157)||(11971335-11971433)
[»] scaffold0007 (6 HSPs)
scaffold0007 (60-204)||(205767-205911)
scaffold0007 (59-157)||(210783-210882)
scaffold0007 (138-204)||(205031-205097)
scaffold0007 (61-156)||(204931-205027)
scaffold0007 (61-156)||(205361-205457)
scaffold0007 (138-189)||(205461-205511)
[»] chr6 (38 HSPs)
chr6 (61-186)||(35163187-35163312)
chr6 (59-216)||(35163573-35163732)
chr6 (53-199)||(835389-835535)
chr6 (59-216)||(31073529-31073687)
chr6 (61-234)||(32836010-32836178)
chr6 (60-199)||(33095716-33095856)
chr6 (59-216)||(31574112-31574270)
chr6 (59-204)||(32836396-32836541)
chr6 (61-199)||(11523686-11523827)
chr6 (59-199)||(33096011-33096156)
chr6 (59-216)||(5120856-5121014)
chr6 (61-216)||(25468852-25469010)
chr6 (59-216)||(25472399-25472558)
chr6 (59-216)||(5114469-5114627)
chr6 (61-210)||(24640578-24640728)
chr6 (152-234)||(20741468-20741551)
chr6 (152-199)||(22534164-22534211)
chr6 (59-234)||(23075495-23075672)
chr6 (59-210)||(30251084-30251237)
chr6 (118-204)||(29891479-29891566)
chr6 (59-137)||(835692-835770)
chr6 (59-230)||(11445358-11445531)
chr6 (61-197)||(31242809-31242945)
chr6 (145-216)||(10900027-10900099)
chr6 (145-216)||(12935245-12935317)
chr6 (59-216)||(10900316-10900474)
chr6 (162-216)||(11276695-11276750)
chr6 (59-216)||(29891081-29891239)
chr6 (145-234)||(22219720-22219810)
chr6 (59-191)||(28636293-28636425)
chr6 (142-210)||(15827725-15827794)
chr6 (140-216)||(28636583-28636659)
chr6 (152-216)||(31573819-31573884)
chr6 (156-234)||(31470414-31470493)
chr6 (145-216)||(31470702-31470773)
chr6 (145-234)||(4811624-4811713)
chr6 (56-133)||(22534063-22534139)
chr6 (59-108)||(22534220-22534269)
[»] chr4 (74 HSPs)
chr4 (59-216)||(17503975-17504132)
chr4 (61-216)||(229546-229702)
chr4 (61-204)||(40160490-40160633)
chr4 (55-172)||(23986517-23986635)
chr4 (54-204)||(35193702-35193852)
chr4 (54-216)||(24335757-24335920)
chr4 (72-216)||(35193322-35193466)
chr4 (59-189)||(40160095-40160225)
chr4 (59-216)||(12593025-12593183)
chr4 (59-216)||(12593410-12593568)
chr4 (60-216)||(34789769-34789927)
chr4 (60-197)||(24336169-24336307)
chr4 (59-196)||(51309912-51310050)
chr4 (61-216)||(229164-229320)
chr4 (59-216)||(34789383-34789541)
chr4 (59-216)||(46737042-46737200)
chr4 (60-199)||(54440973-54441113)
chr4 (60-216)||(54440573-54440728)
chr4 (59-199)||(28465485-28465626)
chr4 (59-199)||(33689830-33689970)
chr4 (61-216)||(14439831-14439987)
chr4 (61-216)||(41608377-41608534)
chr4 (59-216)||(34807117-34807276)
chr4 (59-216)||(18965141-18965299)
chr4 (59-216)||(56077711-56077869)
chr4 (60-216)||(28465083-28465240)
chr4 (61-204)||(28166007-28166151)
chr4 (59-216)||(19528870-19529029)
chr4 (59-216)||(26974284-26974443)
chr4 (83-216)||(17504346-17504480)
chr4 (59-204)||(45838548-45838694)
chr4 (59-216)||(46736656-46736814)
chr4 (145-234)||(25447335-25447425)
chr4 (59-216)||(21034236-21034395)
chr4 (59-216)||(55677344-55677503)
chr4 (59-216)||(14440215-14440373)
chr4 (60-204)||(24851864-24852010)
chr4 (54-197)||(12930800-12930944)
chr4 (59-216)||(19529080-19529239)
chr4 (59-196)||(21034643-21034782)
chr4 (61-216)||(45838934-45839092)
chr4 (59-234)||(11153147-11153324)
chr4 (60-191)||(33778024-33778156)
chr4 (117-216)||(34807526-34807626)
chr4 (61-216)||(41114160-41114318)
chr4 (152-234)||(15523330-15523413)
chr4 (95-216)||(18965523-18965645)
chr4 (156-234)||(51021163-51021242)
chr4 (61-216)||(6616675-6616832)
chr4 (145-234)||(12234696-12234786)
chr4 (126-234)||(12503504-12503614)
chr4 (145-234)||(20470878-20470968)
chr4 (145-234)||(22434267-22434357)
chr4 (145-234)||(45082791-45082881)
chr4 (53-134)||(41608885-41608966)
chr4 (59-198)||(30597925-30598064)
chr4 (61-191)||(33777635-33777766)
chr4 (145-216)||(46193493-46193565)
chr4 (156-234)||(48526548-48526627)
chr4 (145-230)||(4219930-4220016)
chr4 (113-169)||(26974679-26974736)
chr4 (59-191)||(36168743-36168876)
chr4 (145-234)||(54995157-54995247)
chr4 (113-177)||(6617089-6617153)
chr4 (152-216)||(35643661-35643726)
chr4 (61-199)||(36168332-36168474)
chr4 (60-140)||(1397597-1397677)
chr4 (61-234)||(18751602-18751777)
chr4 (59-157)||(51309668-51309767)
chr4 (145-234)||(25938038-25938128)
chr4 (145-233)||(2118381-2118470)
chr4 (61-196)||(16214902-16215038)
chr4 (59-140)||(24851317-24851398)
chr4 (60-124)||(35644042-35644106)
[»] chr8 (44 HSPs)
chr8 (61-216)||(28877277-28877432)
chr8 (54-216)||(35427199-35427362)
chr8 (58-216)||(42035772-42035931)
chr8 (59-216)||(7911003-7911161)
chr8 (59-216)||(9796727-9796885)
chr8 (54-216)||(18805160-18805321)
chr8 (56-216)||(28254813-28254974)
chr8 (53-191)||(15255848-15255987)
chr8 (61-217)||(18049977-18050134)
chr8 (59-199)||(34799487-34799628)
chr8 (63-216)||(18049595-18049750)
chr8 (59-216)||(41260648-41260806)
chr8 (59-164)||(7910617-7910722)
chr8 (59-216)||(599533-599691)
chr8 (59-216)||(599885-600043)
chr8 (59-216)||(5730818-5730976)
chr8 (60-216)||(5731199-5731356)
chr8 (53-216)||(16578483-16578647)
chr8 (65-204)||(28876910-28877050)
chr8 (59-216)||(15256215-15256376)
chr8 (59-189)||(41260272-41260403)
chr8 (60-216)||(28254427-28254585)
chr8 (61-216)||(9797113-9797270)
chr8 (59-199)||(16578109-16578250)
chr8 (61-216)||(18428148-18428305)
chr8 (59-216)||(34799080-34799239)
chr8 (59-216)||(6115497-6115656)
chr8 (59-216)||(35693869-35694029)
chr8 (145-234)||(19176378-19176468)
chr8 (114-198)||(26252865-26252950)
chr8 (59-166)||(18674149-18674256)
chr8 (145-234)||(13225006-13225096)
chr8 (157-234)||(33743021-33743099)
chr8 (61-140)||(35694342-35694421)
chr8 (145-231)||(44831335-44831422)
chr8 (145-234)||(9928997-9929087)
chr8 (59-204)||(9930055-9930201)
chr8 (115-172)||(10047068-10047125)
chr8 (145-204)||(11656854-11656914)
chr8 (145-204)||(12572248-12572308)
chr8 (59-169)||(42036206-42036317)
chr8 (60-197)||(2208716-2208855)
chr8 (145-234)||(41681501-41681591)
chr8 (140-216)||(35426896-35426972)
[»] scaffold0108 (2 HSPs)
scaffold0108 (59-199)||(15503-15643)
scaffold0108 (59-216)||(15114-15271)
[»] scaffold0021 (2 HSPs)
scaffold0021 (83-199)||(159285-159402)
scaffold0021 (54-199)||(159016-159162)
[»] scaffold1432 (1 HSPs)
scaffold1432 (53-171)||(498-616)
[»] scaffold0712 (2 HSPs)
scaffold0712 (59-216)||(6393-6551)
scaffold0712 (61-216)||(6778-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (59-216)||(6411-6569)
scaffold0709 (61-216)||(6796-6957)
[»] scaffold0097 (2 HSPs)
scaffold0097 (59-169)||(46267-46378)
scaffold0097 (59-215)||(46655-46813)
[»] scaffold0025 (1 HSPs)
scaffold0025 (138-216)||(78398-78476)
[»] scaffold0951 (1 HSPs)
scaffold0951 (145-234)||(2034-2124)
[»] scaffold0157 (1 HSPs)
scaffold0157 (126-234)||(16863-16973)
[»] scaffold0273 (1 HSPs)
scaffold0273 (145-234)||(4291-4381)
[»] scaffold0417 (1 HSPs)
scaffold0417 (145-234)||(10990-11080)
[»] scaffold0027 (1 HSPs)
scaffold0027 (145-216)||(42257-42329)


Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 28494787 - 28495029
Alignment:
Q  1 tttgtttttctccaaatgtatactgtaaatgaatgcttgaggataagttatcaattatgcttaattacacttttggtcctcacattttgaccagctcaga 100  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||     
T  28494787 tttgtttttctccaaatgtatactgcaaacgaatacttgaggataagttatcaattaagcttaattacacttttggtccttacattttgaccagttcagg 28494886  T
Q  101 aaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgcagttttagtcctacctcctattttcaactccaaaaacgcag 200  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28494887 aaaatggttctgcctctttcaaatcgaacaaaactgtcctaaactatcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgcag 28494986  T
Q  201 agaagtgacaattttacgtagttttagacctaccgcctttgct 243  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||    
T  28494987 agaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 10721784 - 10721962
Alignment:
Q  56 tatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtttt 155  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||  || |||||| |||||||||||||| ||||||||||||||||||||    
T  10721784 tatgcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcctaaactatcatgtttt 10721883  T
Q  156 ttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| ||||| | |||||||||||||||    
T  10721884 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttaggcagttttagacctacc 10721962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 27307062 - 27307237
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttg 158  Q
    ||||||||||||||||||| ||| ||||||||||| || |  |||||||| |||  ||||| |||| |||||||||  ||||||||||||||||||||||    
T  27307062 gcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcctaaactatcatgttttttg 27307161  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||| ||||| ||||| | |||||||||||||||    
T  27307162 cagttttagtcttacctcctattttcaactccagaaacgcatagaaatgacagttttaggcagttttagacctacc 27307237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 41834604 - 41834446
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt-tttt 157  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||||||  ||||||||| | |||||||||||  |||||||||||||||||| ||||    
T  41834604 gcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcctaaactatcatgttttttt 41834505  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||||    
T  41834504 gcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagtttta 41834446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 234
Target Start/End: Original strand, 13557011 - 13557168
Alignment:
Q  77 tcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgcagttttagtcctacctc 176  Q
    ||||| ||||||||||||||||  |||||||| |||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||    
T  13557011 tcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgtcttaaactatcatgttttttgcagttttagtcctacatc 13557110  T
Q  177 ctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
     |||||| |||| || |||||||||||| |  |||||| | |  ||||||||||||||    
T  13557111 ttattttgaactgcagaaacgcagagaaattgcaatttgatgccgttttagacctacc 13557168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 16752583 - 16752728
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||||||||||   ||||||||||||||||  |||||| | |||| ||||| |||||||||||||| |||| |||||||| |||||||||    
T  16752583 gcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactat-atgtttttt 16752681  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||| ||| ||||||||||||||||||||| ||||||| ||||    
T  16752682 gcagtttttgtcatacctcctattttcaactccataaacgcaaagaa 16752728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 32305831 - 32305976
Alignment:
Q  71 ttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtc 169  Q
    |||||||| || |||||||| |||||||  ||||| ||| | |||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  32305831 ttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatgtttt-tgcagttttagtc 32305929  T
Q  170 ctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| |||||||||||||| |||| ||||||| ||||| |||||    
T  32305930 ctacctcttattttcaactccagaaacacagagaaatgacagtttta 32305976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 28495376 - 28495240
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttg 158  Q
    ||||||||||||||||||||  || |||||||||||||||  |||||||| |||||||||| ||||||||||||||||||         | |||||||||    
T  28495376 gcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtc---------cctgttttttg 28495286  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||||||||||||||||||||||||||| || |||||||||    
T  28495285 cagttttagtcctacctcctattttcaactccagaaccgcagagaa 28495240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 16753114 - 16752939
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt--tttt 157  Q
    |||||||||| |||||||| || ||||||||||| ||||  ||||||||| ||||||||| ||||||||| |||   ||||||| |||||||||  ||||    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccatcctaaattatcatgtttttttt 16753015  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||||||| |||| |||||||||||||||||| ||||||||| || || || ||||| | || ||||||||||||    
T  16753014 gcagttttagacctaactcctattttcaactccagaaacgcagaaaaatggcagttttaggcag-tttagacctacc 16752939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 20266458 - 20266323
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    |||||| ||||||||||||||  ||||||||||||| |  |||||||| ||| |||||| |||||||||||||| || |||||||||||||| || |||     
T  20266458 ttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactatcatggttgttgt 20266359  T
Q  160 agttttagtcctacctcctattttcaactccaaaaa 195  Q
    ||||||||||||||| |||||||||| |||||||||    
T  20266358 agttttagtcctaccccctattttcacctccaaaaa 20266323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 27307605 - 27307445
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg---ttt 154  Q
    ||||||||| ||||||||||| | |||||||||||| |||  ||||||||| | ||||||| |||||||||||||  |||| |||||||| |||   |||    
T  27307605 gcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactat-atgtttttt 27307507  T
Q  155 tttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||    
T  27307506 tttgtagttttagtcctacctcctattttcaactccagaaatgcagagaaatgacattttta 27307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 4967316 - 4967201
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg--tttt 155  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||  | |||||||||||||||||||||| || |||||||||| |||  ||||    
T  4967316 gcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 4967218  T
Q  156 ttgcagttttagtccta 172  Q
    |||||||||||||||||    
T  4967217 ttgcagttttagtccta 4967201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 22651347 - 22651487
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||||| ||||||| |||  |||||||||||||||   ||||||| |||||||||||||||| |||||||   ||| |||||||||||| ||||||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatg-tttttg 22651445  T
Q  159 cagttttagtcctacctcc-tattttcaactccaaaaacgca 199  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  22651446 cagttttagtcctacctccttattttcaactccagaaacgca 22651487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 4966819 - 4966973
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||||||||||||||| ||||||||||| ||||  ||||| ||  |||||||||||||||||||||||| || |||||||||| |||||||| ||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttagc 4966917  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttt 215  Q
    |||||||||| || | ||||||| |||||| | ||| ||| |||| ||||| ||||    
T  4966918 agttttagtcatatcccctatttccaactctagaaatgcacagaaatgacagtttt 4966973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 28290189 - 28290031
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  |  |||||||||||||||||| ||||| ||||||| |||||||||    
T  28290189 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 28290091  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  28290090 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28290031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 17260352 - 17260454
Alignment:
Q  84 attttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacctcctattt 182  Q
    ||||||| ||| ||| |||||||||| ||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  17260352 attttgatcagttcacaaaaatggttctgcatctttcaaatcgaacaaaattgtccataaattatcatgttttttgcagttttagtcctaccccctattt 17260451  T
Q  183 tca 185  Q
    |||    
T  17260452 tca 17260454  T

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Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 38900648 - 38900784
Alignment:
Q  62 taattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgca 160  Q
    |||||||||||||||||||| ||||||||||| ||||  |||||| |  | |||||||||||||||||||||| || |||||| ||| ||||||||||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgca 38900746  T
Q  161 gttttagtcctacct-cctattttcaactccaaaaacg 197  Q
    |||||||||||| || ||||||| |||||||| |||||    
T  38900747 gttttagtcctatctccctatttccaactccataaacg 38900784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 15029854 - 15029696
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||| ||||||||||| ||||  ||||||||  | ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  15029854 gcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 15029756  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| | | || |||||||  ||||||| ||||||| | || ||||| |||||    
T  15029755 gcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagtttta 15029696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 21371241 - 21371083
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||||||||| |||| |||| ||||  | ||||||||||||| |||||||| || |||||||||| |||||||||    
T  21371241 gcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactat-atgtttttt 21371143  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||| ||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  21371142 gcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 21371083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 28289685 - 28289843
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  ||| | || || |||||||||||||||||||||| || |||||| ||| |||||||||    
T  28289685 gcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattat-atgtttttt 28289783  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     |||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  28289784 ccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28289843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 8419167 - 8419008
Alignment:
Q  57 atgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttt 155  Q
    ||||||||||||||||||||||||  ||||||||||| ||||  || |||||  |  || |||||||| ||||||||| |||| |||||||| || ||||    
T  8419167 atgcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactat-at-tttt 8419070  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||| |||| |||||||||||    
T  8419069 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaatttta 8419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 15115643 - 15115482
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg 151  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||  ||||||||  | |||||||||||||||||||||| |||| ||||||||        
T  15115643 aattaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactat---- 15115548  T
Q  152 ttttttgcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     ||||||||||||||||| || |  ||||||| |||||| ||||||||| | || ||||| |||||    
T  15115547 atttttgcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagtttta 15115482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 19291357 - 19291516
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||   ||||||| || |||| |||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  19291357 gcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 19291455  T
Q  157 tgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || |||| ||||| |||||||| ||||||| |||| ||||| |||||    
T  19291456 tgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagtttta 19291516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 22651856 - 22651760
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttt 154  Q
    |||||||||||||||| |||||| ||||||||||||||||  ||||||||| ||||| ||| |||||||||||||| |||| |||||||| ||||||    
T  22651856 gcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactattatgttt 22651760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 194
Target Start/End: Original strand, 28595182 - 28595316
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttg 158  Q
    ||||||| ||||||||||||||  ||||||||||||| | ||||||||| |||| ||||| ||| |||||||||| || |||||||||||||| || |||    
T  28595182 cttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactatcatggttcttg 28595281  T
Q  159 cagttttagtcctacctcctattttcaactccaaaa 194  Q
     || ||||||| |||| | |||||||| ||||||||    
T  28595282 tag-tttagtcataccccatattttcacctccaaaa 28595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 14340953 - 14340794
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaac--tatcatgtttttt 157  Q
    ||||||||| ||||||| ||  ||||||||||| ||||  ||| |||| || | |||||||||||||||||||| |||| |||||  |||  | ||||||    
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatattttttttt 14340854  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | ||||||||||||| |||| ||||| |||||||||||||| |||||| ||||| |||||    
T  14340853 gtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagtttta 14340794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 32697774 - 32697610
Alignment:
Q  56 tatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtt- 153  Q
    ||||||||||||||||||||||| |  ||||||||||| ||||  ||| ||||  | |||||||||||||||||| ||| || |||||||||| |||||     
T  32697774 tatgcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactat-atgttt 32697676  T
Q  154 --ttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
      |||||||||||||||  ||||| ||||||| |||||||| |||| || |||| |||||| ||||    
T  32697675 tattttgcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaattta 32697610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 18149734 - 18149847
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||| ||||| ||||  ||||||||  |  || |||||||||||||||||| ||||| ||||||| |||||||||    
T  18149734 gcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 18149832  T
Q  158 gcagttttagtccta 172  Q
    |||||||||||||||    
T  18149833 gcagttttagtccta 18149847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 164289 - 164368
Alignment:
Q  156 ttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||||||||| |  ||||||||||||||    
T  164289 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacc 164368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 14215329 - 14215419
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  14215329 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 14215419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 18150269 - 18150127
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||| || ||||   |||||||| | ||||  ||| ||||  | ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  18150269 gcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttttt 18150171  T
Q  158 -gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
     ||||||||||||||| || ||||||| |||||||| |||||||    
T  18150170 tgcagttttagtcctatctccctatttccaactccagaaacgca 18150127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 2864842 - 2864932
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |  |||||||| |||||    
T  2864842 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacc 2864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 5819017 - 5819107
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  5819017 tatcatttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 5819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 8461376 - 8461298
Alignment:
Q  157 tgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| ||| |||||||||||||||| ||||| |||||||||||| ||||||||||| |  ||||||||||||||    
T  8461376 tgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacc 8461298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 38901185 - 38901076
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||| |   ||  ||||||||  | ||  |||||||||||||||||| ||||| ||||||| |||||||||    
T  38901185 gcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 38901087  T
Q  158 gcagttttagt 168  Q
    |||||||||||    
T  38901086 gcagttttagt 38901076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 25000546 - 25000474
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| |||| ||||||||||||||| |||||||||||||||||| ||||| |||||    
T  25000546 tatcatttttgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 25000474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 15709415 - 15709336
Alignment:
Q  156 ttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||| ||||||| || ||||||||| ||||| ||||| |  ||||||||||||||    
T  15709415 ttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctacc 15709336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 39083361 - 39083519
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactat-catgtttttt 157  Q
    |||||||||||||| | ||||  ||||||||||| ||||  ||||||||  |   | |||||||||||||||||||| || ||||||||  || ||||||    
T  39083361 cttaattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatatttttt 39083459  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || |||| ||||| |||||||| |||| || |||| ||||| |||||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagtttta 39083519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 5161641 - 5161742
Alignment:
Q  117 ttttaaatcgaacaaaattgtc-ctaaactatcatg-ttttttgcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatt 213  Q
    ||||||||||||||||||||||  |||| ||| ||| |||||||||||||||||| || | |||||||| ||||| |||||||||| |||| ||||| ||    
T  5161641 ttttaaatcgaacaaaattgtctttaaattat-atgtttttttgcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagtt 5161739  T
Q  214 tta 216  Q
    |||    
T  5161740 tta 5161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 6018382 - 6018452
Alignment:
Q  126 gaacaaaattgtcctaaactatcatgttttttgcagttttagtcctacctcctattttcaactccaaaaac 196  Q
    |||||||||| || | || |||||| ||| |||||||||||||||||||  ||||||||| ||||||||||    
T  6018382 gaacaaaattatcttcaattatcatttttgttgcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 8647895 - 8647805
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| ||| ||||| |||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  8647895 tatcatttttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacc 8647805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 17260765 - 17260691
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaa 133  Q
    |||||||| |||||||||||||| |||||||||||  |||  |||||| || | ||||||| |||||||||||||    
T  17260765 gcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaa 17260691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 18183058 - 18183148
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttca-actccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| ||||||||||||||||| | || ||| |||||||||||| ||||| ||||| | |||||||| ||||||    
T  18183058 tatcatttttgttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacc 18183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 29454840 - 29454918
Alignment:
Q  157 tgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| |||||||||||||||||| ||||||| |||||||||||| ||| | ||||| |  ||||||||||||||    
T  29454840 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacc 29454918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 20260936 - 20261001
Alignment:
Q  69 acttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaat 134  Q
    ||||||||||||||||||||||| ||||||  ||||||||   |||||||| ||||| ||||||||    
T  20260936 acttttggtcctcacattttgactagctcatgaaaatggtcccgcctctttcaaatcaaacaaaat 20261001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 24331672 - 24331739
Alignment:
Q  168 tcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  24331672 tcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 24331739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 19359593 - 19359503
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||| | |||| |||||||||||||||||| ||||||| ||||| |||||| || || ||||| |  ||||||||||||||    
T  19359593 tatcatttttgttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacc 19359503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 14465000 - 14464927
Alignment:
Q  121 aaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacctcctattttcaactccaaa 193  Q
    |||||||| ||||| |||| |||| |||||| ||||||||||||||| || |||| | |||||||| |||||||    
T  14465000 aaatcgaataaaatcgtccctaaattatcatattttttgcagttttaatcataccccttattttcacctccaaa 14464927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 5162114 - 5161995
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||| ||||  ||||  ||||||||||| ||||  | | | || || |||||||||||||||||||||| || |||||| ||| ||| |||||    
T  5162114 gcttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattat-atgtttttt 5162016  T
Q  157 tgcagttttagtcctacctcc 177  Q
    |||| ||||||||||| ||||    
T  5162015 tgcaattttagtcctatctcc 5161995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 16019044 - 16018972
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||| | |||| ||||||||||||||||| || ||||| |||||||||||| ||||| |||||    
T  16019044 tatcatttttgttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagtttta 16018972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 27200241 - 27200085
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt 153  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||| ||||||||||| |  ||||||||||||||||||    
T  27200241 attaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcctaaactatcatgtt 27200142  T
Q  154 ttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgaca 210  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgaca 27200085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 49407797 - 49407954
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||| |||| ||||||||  |||| |||||| | ||||||| |    
T  49407797 gcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaacttt-atgttttgt 49407895  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  49407896 acagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaatttta 49407954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 36701640 - 36701503
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||| ||| |||||| ||||||||||||||  ||| |||||||||||||||||||    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttg 36701541  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaac 196  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  36701540 cagttttagtcatacctcctattttcaactccagaaac 36701503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 49408326 - 49408182
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt-tttt 157  Q
    ||||||||||||||||||| ||| ||||||||||| ||||  ||||||||| || |||||| ||||||||||||| ||||||||||||||||||| ||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtcctaaactatcatgttttttt 49408227  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||||||||  ||||||||||||| ||||||| ||||    
T  49408226 gcagttttagtcctacctc--attttcaactccagaaacgcaaagaa 49408182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 50901072 - 50900927
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||   ||||||||  |||||||||||||  || |||||||||| |||||||||    
T  50901072 gcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgtttttt 50900974  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  50900973 gcagtttttgtcctacctcctattttcaactccataaacgcaaagaa 50900927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 2323382 - 2323553
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgca 160  Q
    ||||||||| |||| |||||| |||||||||||| ||| ||||||  |  ||||||||| |||||||||||||   ||||||||||||||||||||||||    
T  2323382 ttaattacattttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaaccatcctaaactatcatgttttttgca 2323481  T
Q  161 gttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagaccta 232  Q
     |||||||||||||||||||||||||||||| |||| | || || ||||| ||||| | | |||||||||||    
T  2323482 attttagtcctacctcctattttcaactccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 234
Target Start/End: Original strand, 50900534 - 50900709
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtttttt-g 158  Q
    |||||||| |||||||||| ||| ||||||| |||||||  ||||||||  |  |||||| |||||||||||||  |||||||||||||||||||||| |    
T  50900534 cttaattaaacttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcctaaactatcatgttttttcg 50900633  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||||||||||||||| ||||||||||||| | ||||  |||||| ||||| ||||| | |||||||||||||||    
T  50900634 cagttttagtcctaccttctattttcaactctagaaacatagagaaatgacagttttaggcagttttagacctacc 50900709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 55192119 - 55192276
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||||| |||| | ||||||||||||||||  ||||||||   |||||||| ||||| |||||||  |||| |||||||| |||||||||    
T  55192119 gcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactat-atgtttttt 55192217  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  55192218 gtagttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagtttta 55192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 8873694 - 8873876
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtttt-ttgc 159  Q
    ||||||||| ||||||||||| |||||||| ||| | |  |||||||| ||| ||||||||||||||||||||  ||| ||| |||||||||||| ||||    
T  8873694 ttaattaca-ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtcataacctatcatgtttttttgc 8873792  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctaccgcctttgct 243  Q
    |||||||||| |||||||||||||||||| || |||||||||||| ||||| ||||| | | |||| |||||||| ||| ||||    
T  8873793 agttttagtcttacctcctattttcaacttcagaaacgcagagaaatgacagttttaggcaattttggacctaccccctatgct 8873876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 36701107 - 36701267
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--tttt 155  Q
    ||||||||||||||||||||||| |||||||| || ||||  |||||| | |||||||||| |||||||||||||| |||| ||||||||||||  ||||    
T  36701107 gcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgtttttt 36701206  T
Q  156 ttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    || | ||||||||  | ||||||||||||||||||| ||||||||| || |||||||||||    
T  36701207 ttacggttttagttatccctcctattttcaactccagaaacgcagataaatgacaatttta 36701267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 40839195 - 40839039
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||||||||||||||||||||||||| | ||||  ||||||||  | |||||||||||||||||||||| || |||||||||| |||||||||||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 40839097  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || |||||||  ||||||| ||||||| |||| ||||| |||||    
T  40839096 agttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 40839039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 37076219 - 37076048
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttg 158  Q
    ||||||||||| ||||||||||| |||||||| |||||||  ||||||||   |||||||| |||||||||||||| ||||||||||||||||||||||     
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcctaaactatcatgtttttta 37076120  T
Q  159 cagttttagtcctacctccta-ttttcaactccaaaaacgcagagaagtgacaattttacgtagttttagac 229  Q
    || |||||||| ||||| ||| |||| ||||| | ||||| |||||| || || ||||| | ||||||||||    
T  37076119 catttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagac 37076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 201
Target Start/End: Original strand, 27199705 - 27199846
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-ttttttg 158  Q
    ||||||||| ||||||||||| ||||||||||||||||  |||||||| |||||||||| |||||||||||||  ||| ||||||||| ||| |||||||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactat-atgtttttttg 27199803  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcaga 201  Q
    |||||||||| |||| ||||||||||||||| | |||||||||    
T  27199804 cagttttagtgctacatcctattttcaactctagaaacgcaga 27199846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 40275094 - 40275254
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg--tttt 155  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||  | ||||||||||||||||||||||||| |||||||| | |||  ||||    
T  40275094 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactct-atgtttttt 40275192  T
Q  156 ttgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||| |||| |||||  ||||||| ||||||| |||| ||||| |||||    
T  40275193 ttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagtttta 40275254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 52236818 - 52236975
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttg 158  Q
    ||||||||||||||| |||||| |||||||| ||  |||  |||||||| || |||||||||||||||||||||| || |||||||||| ||||||||||    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttg 52236916  T
Q  159 cagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| || || |||||||||||||||| ||||||| |||| ||||| |||||    
T  52236917 cagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagtttta 52236975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 52237361 - 52237204
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttg 158  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||||||  | |||||||||||||||||||||| || |||||| ||| ||||||||||    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttg 52237263  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| || |||||||  ||||||  ||||||| |||| ||||| |||||    
T  52237262 cagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagtttta 52237204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 40838655 - 40838811
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||||||||| ||||| ||||||||||| ||||  |||||||| || ||||||||||||| |||||||| |||| |||||||| |||||||||||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactat-atgttttttgc 40838753  T
Q  160 agttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  40838754 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtttta 40838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 52375882 - 52375718
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg 151  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||  ||||||||  | |||||||||||| ||||||||| |||| |||||||| |||    
T  52375882 aattaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat-atg 52375784  T
Q  152 ttttttgcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||| ||  | ||||||| |||||||| ||||||| |||| ||||| |||||    
T  52375783 ttttttgcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagtttta 52375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 55389609 - 55389764
Alignment:
Q  62 taattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgca 160  Q
    |||||||||||||||||||| ||||| ||||| ||||  ||||||||  | ||| |||||||||||||||||| |||| |||||||| ||||||||||||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgca 55389707  T
Q  161 gttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  55389708 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 55389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 38535310 - 38535468
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||| ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  38535310 gcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 38535408  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| ||||||| || ||||||| |||||||||||||||| | || ||||| |||||    
T  38535409 gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagtttta 38535468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 40275638 - 40275481
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||||||||||||||| ||||   |||||||  | |||||||||||||||||||||| ||| ||||||||| |||||||||    
T  40275638 gcttaattacacttttggtcctcacattttgaccaactca-cgaaatggtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgtttttt 40275541  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||| ||||||| | || ||||| |||||    
T  40275540 gcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagtttta 40275481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 52375328 - 52375486
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||||||||||||||||||||||| ||||  |||  |||||||| || |||||||||||| ||||||||| || |||||||||| |||||||||    
T  52375328 gcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactat-atgtttttt 52375426  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| ||| || |||||||  ||||||| ||||||| |||| ||||| |||||    
T  52375427 gcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagtttta 52375486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 25534891 - 25535050
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt--cctaaactatcatgttttt 156  Q
    ||||||||||||||||||||||| |||||||||||  |||  ||||||||  | |||||||||||||||||||||| ||  |||||| ||| ||||||||    
T  25534891 gcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattat-atgttttt 25534989  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  25534990 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 25535050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 44677015 - 44676859
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||||||||||||||  ||||||||||| ||||  |||||||| ||  || |||||||||||||||||| |||| |||||||| |||||||||||    
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 44676917  T
Q  160 agttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | ||||||||||| ||| ||||||||||||||| ||||||| | || ||||| |||||    
T  44676916 aattttagtcctatctctctattttcaactccagaaacgcacataaatgacagtttta 44676859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 37075683 - 37075840
Alignment:
Q  55 ttatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-- 151  Q
    ||||||||||||||||||||||||  | ||||||||||| ||||  ||||||||  ||||||||| ||||| ||||||   || |||||||||| |||      
T  37075683 ttatgcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactat-atgtt 37075781  T
Q  152 -ttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgac 209  Q
     ||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  37075782 tttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgac 37075840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 43222391 - 43222530
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||  |||||||| |||||||||||||| ||||  ||||| |||||| ||||||||||||||||||||| || |||||||||| |||||||||    
T  43222391 gcttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 43222489  T
Q  158 gcagttttagtcctacctccta-ttttcaactccaaaaacg 197  Q
    ||| ||||| ||||||| |||| |||||||||||| |||||    
T  43222490 gcatttttaatcctaccccctatttttcaactccagaaacg 43222530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 43222935 - 43222776
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||| ||||||||||||||| ||||||||| ||| ||  |||||||| ||||||||||||||||||||||||| || |||||||| | ||| |||||    
T  43222935 gcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaact-ttatgtttttt 43222837  T
Q  157 tgcagttttagtcctacctccta-ttttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| ||| |||| |||||||||||| ||||||| | || ||||| |||||    
T  43222836 tgcagttttagtcccaccccctatttttcaactccagaaacgcacaaaaatgacagtttta 43222776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 47431697 - 47431856
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  |||||||| || |||||||||||||||||||||| |||  |||||||| ||| |||||    
T  47431697 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactat-atgtttttt 47431795  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || |||||||  ||||||| ||||||| |||| ||||| |||||    
T  47431796 tgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 47431856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 50662957 - 50662799
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| ||||||||||||  ||||||||| | ||||  ||||| || ||  || |||||||||||||||||| |||| |||||||| |||||||||    
T  50662957 gcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 50662859  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||||||||||| ||||||| |||| ||||| |||||    
T  50662858 gcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagtttta 50662799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 51827958 - 51828116
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  |  ||||||||||||||||||||| || |||||||||| |||||||||    
T  51827958 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 51828056  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||| ||||||||||| || |||||||||||||||| ||||||| | || ||||| |||||    
T  51828057 gcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtttta 51828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 55390142 - 55389984
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||| |||||| ||||  |||  ||||||||  | ||| ||||||||| |||||||| ||| ||||||||| |||||||||    
T  55390142 gcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactat-atgtttttt 55390044  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | |||||||||||||||| ||||||| |||||||| ||||||| |||| ||||| |||||    
T  55390043 gtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagtttta 55389984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 37847340 - 37847207
Alignment:
Q  83 cattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacctcctatt 181  Q
    ||||||||  ||||||| ||||||||  ||||||||| ||||||||||||   |||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  37847340 cattttgataagctcaggaaaatggtcttgcctctttcaaatcgaacaaagccgtccctaaactatcatgttttt-gcagttttagtcctatctcctatt 37847242  T
Q  182 ttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| || ||| |||||||| |||||||||||    
T  37847241 ttcaacttcagaaatgcagagaaatgacaatttta 37847207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 46013423 - 46013564
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  ||| |||| || |||||||||||||||||||||| || |||||| ||| |||||||||    
T  46013423 gcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtat-atgtttttt 46013521  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    |||||||||||| || || |||||||||||||||| |||||||    
T  46013522 gcagttttagtcatatctccctattttcaactccagaaacgca 46013564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 14654734 - 14654578
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||| | | |||||||||||||||||||||| |||| ||||||   |||||||||    
T  14654734 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaact---atgtttttt 14654638  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| |||| ||||| |||||||| ||||||| | || ||||| |||||    
T  14654637 gcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagtttta 14654578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 51828503 - 51828344
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  || |||||||| ||||  |||||||| ||   | ||||||||||||||||||||||| |||||||| ||| |||||    
T  51828503 gcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactat-atgtttttt 51828405  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  51828404 tgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtttta 51828344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 330381 - 330223
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||||| |||||||||| ||||||||||| ||||  ||||||||  | ||| ||||||||| |||||||| || |||||||||| |||||||||    
T  330381 gcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactat-atgtttttt 330283  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||| | ||||||| |||| ||||| |||||    
T  330282 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtttta 330223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 49952091 - 49951933
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgtttttt 157  Q
    ||||||||||| ||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| |||  ||||||| ||||||||||    
T  49952091 gcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaacta-catgtttttt 49951993  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || |||||||||||||||| ||||||| | || ||||| |||||    
T  49951992 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagtttta 49951933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 46013969 - 46013809
Alignment:
Q  58 tgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-tttt 155  Q
    |||||||||||||||||||| ||  ||||||||||| |||  |||||||||| |  || |||||||||||||||||| |||| |||||||| ||| ||||    
T  46013969 tgcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 46013871  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  46013870 ttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 46013809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 49951549 - 49951688
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||||    
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 49951647  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    | ||||||||||| || ||||||| |||||||| |||||||    
T  49951648 aattttagtcctatctccctatttccaactccataaacgca 49951688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 5137531 - 5137348
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatg 151  Q
    ||||| |||||||||||||||||||||||   ||||| ||  ||||  ||| ||||| ||||  ||| |||| ||||||||| |||||  || ||||||     
T  5137531 aattaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatt 5137432  T
Q  152 ttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||| ||||| ||||||||||| ||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  5137431 tttgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 5137348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 189
Target Start/End: Complemental strand, 41998773 - 41998643
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtttttt- 157  Q
    ||||||||||||||||||||||  ||||||||||| || |  ||| ||||  | |||||||||||||||||||||| ||||  |||||| |||||||||     
T  41998773 gcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaactat-atgttttttt 41998675  T
Q  158 gcagttttagtcctacctcctattttcaactc 189  Q
    ||||||||||||||||  ||||||||||||||    
T  41998674 gcagttttagtcctactccctattttcaactc 41998643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 43678296 - 43678454
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  || ||||| ||  || |||||||||||||||||| |||| |||||||| |||||||||    
T  43678296 gcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 43678394  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||| || |||| | || ||||| |||||    
T  43678395 gcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagtttta 43678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 44676473 - 44676631
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||| | ||||  ||| || | || |||||||||||||||||||||  || |||||||||| |||||||||    
T  44676473 gcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactat-atgtttttt 44676571  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| |||||||||| || ||||||| |||||| | ||||||| |||| ||||| |||||    
T  44676572 gcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagtttta 44676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 51472856 - 51473014
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| ||||||||||||  ||||||||||| ||||  ||| |  |  | ||||||||||||| ||||||||||||| |||| ||| |||||||||    
T  51472856 gcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtat-atgtttttt 51472954  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtttta 51473014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 2044272 - 2044413
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||| |||||||||| ||| ||||||||||| ||||  |||||||| || |||||||||||||||||||||| |||| |||| ||| |||||||||    
T  2044272 gcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattat-atgtttttt 2044370  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    | |||||||||| || || ||||||| |||||| | |||||||    
T  2044371 ggagttttagtcatatctccctatttccaactcaagaaacgca 2044413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 39010076 - 39010209
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgtttttt 157  Q
    ||||||||||| ||||||||||  ||||||||||| |||| |||| || | || |||||||||||||||||||||||| || |||||| | |||||||||    
T  39010076 gcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgt-atgtttttt 39010174  T
Q  158 gcagttttagtcctacct-cctattttcaactcca 191  Q
    ||||||||||||  | || ||||||||||||||||    
T  39010175 gcagttttagtcacatctccctattttcaactcca 39010209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 49720906 - 49720773
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||   |||||||||| ||||  |||||||| ||  || |||||||||||||||||| |||| |||||||| |||||||||    
T  49720906 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 49720808  T
Q  158 gcagttttagtcctacct-cctattttcaactcca 191  Q
    |||||||||||| || || ||||||| ||||||||    
T  49720807 gcagttttagtcttatctccctatttccaactcca 49720773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 51473399 - 51473242
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttttg 158  Q
    ||||||||||||||| ||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||||    
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 51473301  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| || ||||||| |||||||||||||||| | || ||||| |||||    
T  51473300 cagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagtttta 51473242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 12140938 - 12141079
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttg 158  Q
    ||||| || |||||||| |||||  ||||| | ||| |||  |||||||| |||||||||| |||||||| ||||    ||||||||||||||||||||     
T  12140938 gcttacttgcacttttgttcctcgtatttttatcagatcacgaaaatggtcatgcctctttcaaatcgaagaaaacgtccctaaactatcatgttttttt 12141037  T
Q  159 -cagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
     |||||||||||||||| |||||||||| |||||||||||||    
T  12141038 tcagttttagtcctaccccctattttcacctccaaaaacgca 12141079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 51828540 - 51828699
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  |||||||||||  | |  ||| ||||  | |||||||||||||||||||||| |||| |||||||| ||| |||||    
T  51828540 gcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactat-atgtttttt 51828638  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  51828639 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 51828699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 8874229 - 8874073
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaa-ttgtcctaaactatcatg--tttttt 157  Q
    ||||||||||||||  ||| | | ||||||||||||||  ||||||||  ||| |||||||||||||||||||  |  |||||||||| |||  ||||||    
T  8874229 ttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactat-atgtttttttt 8874131  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| |||| ||||| |||||    
T  8874130 gcagttttagttctaccttctattttcaactccagaaacgca-agaaatgacagtttta 8874073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 49720372 - 49720530
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||| ||| | |||||||    
T  49720372 gcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtat-acgtttttt 49720470  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| |||| |||||  ||||||| ||||||| | || ||||| |||||    
T  49720471 gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagtttta 49720530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 22370599 - 22370744
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttttg 158  Q
    ||||||||||||||||||||| ||||||||||| ||||  ||||||||  | ||| ||||||| | |||||||| || |||||||||| ||| |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactat-atgtttttttg 22370697  T
Q  159 cagttttagtcctacctcc-tattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||| |||| ||| | |||||||| ||||||| ||||    
T  22370698 cagttttagtcctatctccttatctccaactccagaaacgcacagaa 22370744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 329850 - 329965
Alignment:
Q  62 taattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgca 160  Q
    |||||||||||||||| ||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgca 329948  T
Q  161 gttttagtcctacctcc 177  Q
    |||||||||||| ||||    
T  329949 gttttagtcctatctcc 329965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 16689361 - 16689472
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||| ||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatat-atgttttttgc 16689459  T
Q  160 agttttagtccta 172  Q
    |||||||||||||    
T  16689460 agttttagtccta 16689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 41998230 - 41998389
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| |||   ||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  41998230 gcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 41998328  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || || ||||||| |||||||| ||||| | |||| ||||| |||||    
T  41998329 tgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagtttta 41998389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 32730933 - 32730776
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttg 158  Q
    ||||||||||||||||||| |  |||||| |||| ||||  ||||||||  |  || |||||||| ||||||||| ||||| ||||||| ||||||||||    
T  32730933 cttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactat-atgttttttg 32730835  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||| ||||| || |||||||  ||||||| ||||||| |||| ||||| |||||    
T  32730834 cagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagtttta 32730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 34104639 - 34104796
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    |||| ||||||||||| || ||  ||||||||||| ||||  ||||||||| |  || |||||||| ||||||||| ||| | ||||||| |||||||||    
T  34104639 gcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactat-atgtttttt 34104737  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || ||||||||| || ||||| ||||||| | || ||||| |||||    
T  34104738 gcagttttagtcatatctcctatttccagctccagaaacgcacaaaaatgacattttta 34104796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 37727474 - 37727297
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    ||||||||||||||||||||||||  ||||| ||  ||||  ||| ||||  ||| ||||||||| | ||||||||  |||||  || |||||| ||| |    
T  37727474 gcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgc-tcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  157 tgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 37727297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 27393662 - 27393839
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||||||||||   ||||||||  |||| |||| ||||  ||||  ||| |||  ||||||||  |||||  || |||||| ||| ||    
T  27393662 gcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgtt 27393761  T
Q  158 gcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||| |||| |||||||| ||||||||||| | ||| |||||||||||| ||||| ||||| | |||||||||||||||    
T  27393762 gcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacc 27393839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 32730392 - 32730548
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||||||||||||||  ||||||||||| |||   ||| ||||  | |||||||||||| ||||||||| || |||||||||| |||||||||||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactat-atgttttttgc 32730490  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| || || || ||||||| |||||| | ||||||| | || ||||| |||||    
T  32730491 agttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagtttta 32730548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 33412699 - 33412610
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactat 147  Q
    ||||||||||||||||||||||| |||||||| |||||||  ||||||||| || ||||||  ||||||||||||| || ||||||||||    
T  33412699 gcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactat 33412610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 12141236 - 12141113
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||| |||||| | ||| |||   |||||||  | ||||||| |||||||||||||   || |||||||||||||||||||    
T  12141236 gcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaactatcatgtttttt 12141137  T
Q  158 gcagttttagtcctacctcctatt 181  Q
    ||||||||| || |||| ||||||    
T  12141136 gcagttttaatcttaccccctatt 12141113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 16701337 - 16701193
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg---ttt 154  Q
    ||||||||||| ||||||||||  ||||||||||| ||||  |||||||| ||  || |||||| ||||||||||| |||| |||||||| |||   |||    
T  16701337 gcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactat-atgtttttt 16701239  T
Q  155 tttgcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||||||| || || ||||||| |||||||| |||||||    
T  16701238 tttgcagttttagtcatatctccctatttccaactccataaacgca 16701193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 38535785 - 38535699
Alignment:
Q  114 ctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||||||| || ||||||| |||||||| |||||||    
T  38535785 ctcttttaaatcgaataaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgca 38535699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 43678829 - 43678671
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  |||||||| || ||||  ||  ||||    |||||||||||||||||||||| |||| |||||||| |||||||||    
T  43678829 gcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactat-atgtttttt 43678731  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| |||| || | |||||||| |||||| | ||||||| | || ||||| |||||    
T  43678730 gcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagtttta 43678671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 4275908 - 4275731
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| |||| |||| ||||||||| | ||||||||  |||||  || |||||| ||| |    
T  4275908 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgc-tcttttaaaacagaacaaaacggtcctttaattatcatttttgt 4275810  T
Q  157 tgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| |||||||||||||||||| ||||||| |||||||||||| || || ||||| |  ||||||||||||||    
T  4275809 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacc 4275731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 26837448 - 26837538
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  26837448 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 31778741 - 31778831
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  31778741 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 31778831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 43973897 - 43973807
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttca-actccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| ||||||||||||||||||| || ||| |||||||||||| ||||| ||||| | |||||||||||||||    
T  43973897 tatcatttttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacc 43973807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 34105190 - 34105035
Alignment:
Q  64 attacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg--ttttttgca 160  Q
    |||||||||||||||||  ||||||||||| || |  ||  ||||  | |||||||||||||||||||||| || |||||||||| |||  |||||||||    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttttgca 34105092  T
Q  161 gttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| | |||| ||||| ||||| || ||||||| |||| ||||| |||||    
T  34105091 gttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagtttta 34105035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 39555579 - 39555756
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| ||||  ||||  ||| |||  ||||||||| |||||  || |||||| ||| ||    
T  39555579 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgtt 39555678  T
Q  158 gcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||| |||| || ||||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  39555679 gcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 39555756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 25853235 - 25853410
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| |||| |||||  ||| |||| ||||||||  |||||  || |||||| ||| ||    
T  25853235 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgtt 25853334  T
Q  158 gcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagaccta 232  Q
    ||| |||| || ||||||||||||||| ||||||| |||||||||||| | ||| ||||| |  ||||||||||||    
T  25853335 gcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagaccta 25853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 51829085 - 51828927
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    |||||||||||||||||||| |   ||||||| || ||||  ||||||||  |  || |||||| || |||||||| ||||| ||||||| |||||||||    
T  51829085 gcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactat-atgtttttt 51828987  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| ||||| || ||||||| | || ||||| |||||    
T  51828986 gcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagtttta 51828927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 14654200 - 14654313
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgtttttt 157  Q
    ||||||||||||||||| | ||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||  |||||||| |||||||||    
T  14654200 gcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactat-atgtttttt 14654298  T
Q  158 gcagttttagtccta 172  Q
    ||| |||||||||||    
T  14654299 gcatttttagtccta 14654313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 22424902 - 22424992
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||| |||||||| ||||| ||||| |  ||||||||||||||    
T  22424902 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacc 22424992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 24300644 - 24300734
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||| ||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  24300644 tatcatttttgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 24300734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 29801873 - 29801783
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||| ||||||||||||||| ||||| |||||||||||| |||||||||||    ||||||||||||||    
T  29801873 tatcatttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacc 29801783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 30513724 - 30513881
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttt-tg 158  Q
    |||||||||| ||||||||||  ||||||||| | ||||  ||||||||  |  || |||||||||||| ||||| ||| |||||||| |||||||| ||    
T  30513724 cttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtcttaaactat-atgtttttctg 30513822  T
Q  159 cagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| || |||| |||||  |||| || ||||||| |||| ||||| |||||    
T  30513823 cagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagtttta 30513881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 41047156 - 41047066
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| || || ||||| |  ||||||||||||||    
T  41047156 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacc 41047066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 33412461 - 33412425
Alignment:
Q  149 atgttttttgcagttttagtcctacctcctattttca 185  Q
    |||||||||||||||||||||||||||||||||||||    
T  33412461 atgttttttgcagttttagtcctacctcctattttca 33412425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 2051296 - 2051371
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaat 134  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || ||||||||||||||||||    
T  2051296 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaat 2051371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 23228551 - 23228414
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||| |   ||||| ||  ||||  |||||| | ||||| |||||||| ||||||||||||||| | || |||||| ||| ||    
T  23228551 gcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcc-cttttaaaacgaacaaaattgtccttcaattatcatttttatt 23228453  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaac 196  Q
    ||| |||| ||||||||||| |||||   ||||||||||    
T  23228452 gcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 5136983 - 5137139
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttttg 158  Q
    |||||||||||||||||||||   ||||| ||| ||||  ||| |||| ||||| |||||||| | ||||||||  |||||  || |||||| ||| |||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 5137081  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    || |||| |||||||| || |||||   |||||||||||||||||| ||||| |||||    
T  5137082 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 5137139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 26274655 - 26274744
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctac 233  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| ||||||| ||||||||  || ||||| ||||| | ||||||||||||||    
T  26274655 tatcatttttgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctac 26274744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 20841018 - 20840958
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaa 204  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||||||||    
T  20841018 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaa 20840958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 30098307 - 30098148
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||   |||||||   ||||  ||| ||||  |||| |||||||| | ||||||||| |||||  || |||||| ||| |    
T  30098307 gcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcc-cttttaaaacagaacaaaatggtccttcaattatcatttttgt 30098209  T
Q  157 tgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| |||| |||||||||||||||||| |||| || |||||||||||  ||||| |||||    
T  30098208 tgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagtttta 30098148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 17464579 - 17464669
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||| | |||| ||||| ||||| |  || |||||||||||    
T  17464579 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacc 17464669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 23644922 - 23644834
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagaccta 232  Q
    |||||| ||| ||||| ||||  ||||||||||||||||| ||||| |  ||||||||||| ||||| ||||| |  ||||||||||||    
T  23644922 tatcatttttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagaccta 23644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 43973442 - 43973585
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtcc-taaactatcatgttttt 156  Q
    |||||||||||||||||||||||   ||||| ||  ||||  |||||| ||||||| |||||||| | ||||||||  |||| | || |||||| ||| |    
T  43973442 gcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  157 tgcagttttagtcctacctcctattttcaactccaaaaacgcaga 201  Q
    |||| |||| |||||||| || |||||   |||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcaga 43973585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 9e-51; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 215
Target Start/End: Complemental strand, 31797322 - 31797166
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||||  || |||||||||| |||||||||    
T  31797322 gcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttttt 31797224  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttt 215  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||    
T  31797223 gcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 28143579 - 28143417
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgt 152  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||  ||||||||  ||||||||| |||||||||||||| || ||||||||||||||     
T  28143579 attaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg- 28143481  T
Q  153 tttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||    
T  28143480 tttttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagtttta 28143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 14942391 - 14942243
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--tttt 155  Q
    |||||||||||||||||||| || ||||||||||||||||  ||||||||  || |||||| ||||||||||||||||||| |||| |||||||  ||||    
T  14942391 gcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgtttttt 14942292  T
Q  156 ttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  14942291 ttgcagttttagtcctacatcctattttcaactccagaaatgcagagaa 14942243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 42192241 - 42192399
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||  | |||||||||||||||||||||| || |||||||||| |||||||||    
T  42192241 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 42192339  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||  ||||||| ||||||| | || ||||| |||||    
T  42192340 gcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagtttta 42192399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 16953480 - 16953321
Alignment:
Q  58 tgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttt 156  Q
    |||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | ||||||||||||||||||||| ||| |||||| ||| ||||||||    
T  16953480 tgcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtat-atgttttt 16953382  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||||||||||| |||| ||||| |||||    
T  16953381 tgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagtttta 16953321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 4355756 - 4355914
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||  ||||  ||| |||| || |||||||||||||||||||||| || |||||||||| |||||||||    
T  4355756 gcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 4355854  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||||||||||| ||||||| | || ||||| |||||    
T  4355855 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtttta 4355914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 33920615 - 33920771
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||| ||||||||||  ||||||||||| ||||  ||| || | || |||||||||||||||||||||| || |||||||||| ||| |||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgatttttgc 33920713  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || |||||||||||||||| ||||||| |||| ||||| |||||    
T  33920714 agttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagtttta 33920771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 38007951 - 38008110
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| ||| |||||    
T  38007951 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 38008049  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || || ||||||| |||||||||||||||| |||| ||||| |||||    
T  38008050 tgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagtttta 38008110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 42192788 - 42192629
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||| ||||||||||| ||||  ||||||||  | |||||||||||||||||||||| || |||||||||  ||| |||||    
T  42192788 gcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta-gatgtttttt 42192690  T
Q  157 tgcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  42192689 tgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtttta 42192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 11540183 - 11540025
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| |||||||||| || ||||||||||| ||||  ||||||||  | |||||||||||||||||||||| |||| |||||||| |||||||||    
T  11540183 gcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat-atgtttttt 11540085  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| ||  | ||||||| |||||||| ||||||| |||| ||||| |||||    
T  11540084 gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagtttta 11540025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 44219645 - 44219803
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  |||||||| || |||| ||||||| |  | ||| ||||||||||||||||||||||| |||| ||| |||||||||    
T  44219645 gcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattat-atgtttttt 44219743  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||| ||| |||||||| ||||||| |||| ||||| |||||    
T  44219744 gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagtttta 44219803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 38008496 - 38008355
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  38008496 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 38008398  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||||||| || ||||||| |||||||| |||||||    
T  38008397 gcagttttagtcctatctccctatttccaactccataaacgca 38008355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 16175892 - 16175736
Alignment:
Q  62 taattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttttgc 159  Q
    ||||||||||||||||||| ||||||| |||| ||||  ||| |||| || |||||||||||||||||||||| |||| |||||||| ||| ||||||||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgc 16175794  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  16175793 agttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 16175736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 43216254 - 43216096
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||||||||| |||||  | ||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| || ||||||    
T  43216254 gcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atatttttt 43216156  T
Q  158 gcagttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| ||| |||||| |||||||| ||| ||| |||| |||||||||||    
T  43216155 gcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaatttta 43216096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 43160012 - 43160169
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactat-catgttttttg 158  Q
    ||||||||| ||||||||||  |||||||| || ||||  ||| |||| || |||||||||||||||||||||| || |||||||||| ||| |||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacat-ttttttg 43160110  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| || |||||||||||||||| ||||||| | || ||||| |||||    
T  43160111 cagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtttta 43160169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 4356306 - 4356143
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgt 152  Q
    |||| ||||||||||||||||||||||  ||||||||||| ||||  | |||||| ||  || |||||||||||||||||| |||| |||||||| ||||    
T  4356306 attaggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgt 4356208  T
Q  153 tttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| | |||  | ||||||| |||||||| ||||||| |||| ||||| |||||    
T  4356207 tttttgcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagtttta 4356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 62958 - 63116
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||| |||||||  ||||||||||| ||||  ||||||||  | ||| ||| |||||||||||||| |||| |||||||| |||||||||    
T  62958 gcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgtttttt 63056  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||| | ||||||| | || ||||| |||||    
T  63057 gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagtttta 63116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 20128282 - 20128124
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  |||||| |||| ||||  ||| ||||  | ||||||||||||| |||||||| |||| |||||||| |||||||||    
T  20128282 gcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactat-atgtttttt 20128184  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||| ||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  20128183 gcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 20128124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 15550676 - 15550833
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttttg 158  Q
    ||||||||||||||| ||||  |||| |||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| ||| |||||||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttg 15550774  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||  | |||||||||||||||| ||||||| |||| ||||| |||||    
T  15550775 cagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagtttta 15550833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 2190612 - 2190480
Alignment:
Q  68 cacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttttgcagtttt 165  Q
    ||||||||||| || ||||||||||||||||  ||| ||||  ||||| ||| |||||||||||||| || |||||| ||||| | ||||||||||||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattatcacgcttttttgcagtttt 2190513  T
Q  166 agtcctacctcctattttcaactccaaaaacgc 198  Q
    ||||||||| || | ||||| ||||||||||||    
T  2190512 agtcctacccccgaatttcatctccaaaaacgc 2190480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 11539638 - 11539797
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttt-t 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |   | |||||||||||||||||| ||||| ||||||| ||||||| |    
T  11539638 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 11539736  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  11539737 tgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 11539797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 20127737 - 20127896
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  |||||||||||  |||  ||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  20127737 gcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 20127835  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||| ||| ||||||| | || |||||||||||    
T  20127836 tgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaatttta 20127896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 197
Target Start/End: Complemental strand, 44220190 - 44220049
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||||||||| |||||| ||||||||||| ||||  |||||||| || ||| ||||||||| |||||||| || |||||||||| |||||||||    
T  44220190 gcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactat-atgtttttt 44220092  T
Q  158 gcagttttagtccta---cctcctattttcaactccaaaaacg 197  Q
    | |||||||||| ||   || ||||||| |||||||| |||||    
T  44220091 gtagttttagtcatatctccccctatttccaactccagaaacg 44220049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 649528 - 649669
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||| ||||||| || |  ||| ||||  | |||||||||||||||||||||| || |||||||||| |||||||||    
T  649528 gcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 649626  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||| ||  || ||||||| |||||||| |||||||    
T  649627 gcagttttagttctgtctccctatttccaactccagaaacgca 649669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 9330338 - 9330209
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttttg 158  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||| | || || |||||||||||||||||||||| || || ||||||| ||| |||||||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactat-atgtttttttg 9330240  T
Q  159 cagttttagtcctacct-cctattttcaact 188  Q
    |||||||||||||| || |||||||||||||    
T  9330239 cagttttagtcctatctacctattttcaact 9330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 13399969 - 13399807
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggt-tatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg 151  Q
    |||| |||||||| || |||| |||||  ||||||||||| ||||  |||||||| |||   ||||||||||||||||||||||||| |||||||| ||     
T  13399969 attaggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtctatt--tcttttaaatcgaacaaaattgtccttaaactat-ata 13399873  T
Q  152 ttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  13399872 ttttttgcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagtttta 13399807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 18450918 - 18451008
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  18450918 tatcattttttttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 18451008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 4808934 - 4809038
Alignment:
Q  113 cctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgaca 210  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||| | |||||||| |||||||| ||||||| |||| |||||    
T  4808934 cctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgtagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgaca 4809032  T
Q  211 atttta 216  Q
     |||||    
T  4809033 gtttta 4809038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 13399477 - 13399581
Alignment:
Q  113 cctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgaca 210  Q
    |||||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||||| || ||||||| |||||||| ||||||| |||| |||||    
T  13399477 cctcttttaaatggaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgaca 13399575  T
Q  211 atttta 216  Q
     |||||    
T  13399576 gtttta 13399581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 20495196 - 20495301
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    |||||| |||||||||| ||| ||||||||||| ||||  |||||| | |||||||||||||||| |||||||| || ||||||||||||| ||||||||    
T  20495196 ttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactatcatattttttgc 20495295  T
Q  160 agtttt 165  Q
    | ||||    
T  20495296 actttt 20495301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 6949452 - 6949611
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||| ||||||||||  ||||||||| | ||||  ||||||||  |  || |||||||||||||||||| |||| | |||||| ||| |||||    
T  6949452 gcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactat-atgtttttt 6949550  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  6949551 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtttta 6949611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 15551218 - 15551078
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatg-ttttttgc 159  Q
    |||||||||||||||| |||  ||||||||||| |||| ||||||||| ||   | |||||||||||||||||| ||||| || |   ||| ||||||||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||||| || ||||||| |||||||| |||||||    
T  15551118 agttttagtcctatctccctatttccaactccagaaacgca 15551078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 32418160 - 32418316
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||||||| |||||||  ||||||||||| ||||  ||| ||||  | |||||||  ||||||||||||| || |||||||||| || ||||||    
T  32418160 gcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactat-atatttttt 32418256  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || |||| ||||| |||||||| ||||||| |||| ||||| |||||    
T  32418257 gcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacattttta 32418316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 33921157 - 33920998
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||  |||||||  ||| |||||    
T  33921157 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaacta-aatgtttttt 33921059  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||| | ||||||| |||| ||||| |||||    
T  33921058 tgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagtttta 33920998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 43160556 - 43160397
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||||| ||||||  ||||||||| | ||||  ||||||||  |  || ||||||||||||| |||| ||||| ||||||| |||||||||    
T  43160556 gcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactat-atgtttttt 43160458  T
Q  158 -gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  43160457 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 13315496 - 13315656
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg---ttttt 156  Q
    |||||||||||||| |||||  ||||||||||| ||||  |||||||| ||  || |||||||||||||||||| |||| |||||||| |||   |||||    
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttt 13315594  T
Q  157 tgcagttttagtcctacct-cctattttcaactcca-aaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| |||| ||| |||| ||||| |||||    
T  13315595 tgcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagtttta 13315656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 5037225 - 5037103
Alignment:
Q  77 tcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgcagttttagtcctacct 175  Q
    |||||||||||||| | | |||  |||||||| ||||||||||||||| ||||||||| || ||||||||| ||||| |||||| ||||||||| ||| |    
T  5037225 tcctcacattttgatcggttcatgaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaactaacatgtcttttgctgttttagtcatactt 5037126  T
Q  176 cctattttcaactccaaaaacgc 198  Q
    || ||||||  || |||||||||    
T  5037125 cccattttccccttcaaaaacgc 5037103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 5560052 - 5560161
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  |||||||| ||  || |||||||| ||||||||| |||| |||||||| || ||||||    
T  5560052 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactat-atatttttt 5560150  T
Q  158 gcagttttagt 168  Q
    |||||||||||    
T  5560151 gcagttttagt 5560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 7446803 - 7446714
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctac 233  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||| |  |||||||||||||    
T  7446803 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctac 7446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 4809424 - 4809266
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||| | ||||  ||||||||  |   | |||||||| ||||||| | ||||| ||||||| |||||||||    
T  4809424 gcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactat-atgtttttt 4809326  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| ||||| |||||| ||| | || ||||| |||||    
T  4809325 gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagtttta 4809266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 32418691 - 32418549
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| ||||||||||||  |||||||||||  |||  ||| || || | |||||||||||||||||||||| |||| |||||||| || ||||||    
T  32418691 gcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactat-atatttttt 32418593  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcag 200  Q
    ||||||||| || || || ||||||| |||||| | ||||||||    
T  32418592 gcagttttaatcttatctccctatttccaactctagaaacgcag 32418549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 6949989 - 6949869
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactat-catgttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | | |||||||||| ||||||||| || ||||||||||   | |||||    
T  6949989 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttttttt 6949890  T
Q  157 tgcagttttagtcctacctcc 177  Q
    |||||||||||||||| ||||    
T  6949889 tgcagttttagtcctatctcc 6949869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 25336150 - 25336034
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgt 152  Q
    |||| ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | | |||||||||||||||||||| || |||||| |||    |    
T  25336150 attaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatt 25336051  T
Q  153 tttttgcagttttagtc 169  Q
    |||||||||||||||||    
T  25336050 tttttgcagttttagtc 25336034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 5561015 - 5560937
Alignment:
Q  138 cctaaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| |||||||||||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  5561015 cctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 5560937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 16952936 - 16953096
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--tttt 155  Q
    ||||||||| ||||||||||||  ||||||||||| ||||  ||||| ||  |  || |||||||||||||||||| |||| |||||||| |||  ||||    
T  16952936 gcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 16953034  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| ||||||||| || || ||||||| |||||| | ||||||| |||| ||||| |||||    
T  16953035 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtttta 16953096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 17060907 - 17061067
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--tttt 155  Q
    ||||||||| ||||||||||||  ||||||||||| ||||  ||||| ||  |  || |||||||||||||||||| |||| |||||||| |||  ||||    
T  17060907 gcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 17061005  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| ||||||||| || || ||||||| |||||| | ||||||| |||| ||||| |||||    
T  17061006 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtttta 17061067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 40815433 - 40815523
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| ||||||||||||||||| || ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  40815433 tatcatttttgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 40815523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 24140224 - 24140066
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgt 152  Q
    |||| ||||||||||||||||| ||||| ||| ||||||| ||||  ||||||||  | ||| ||||||||| |||||||| |||| |||||||          
T  24140224 attaggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaacta------ 24140131  T
Q  153 tttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | |||||||||||||| |||  | ||||||| |||||||| ||||||| |||| ||||| |||||    
T  24140130 tatttgcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacattttta 24140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 8425453 - 8425532
Alignment:
Q  156 ttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||| ||||||| ||| |||||||| ||||| ||||| |  ||||||||||||||    
T  8425453 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctacc 8425532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 43058779 - 43058700
Alignment:
Q  156 ttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||| ||||||| |||||||||||| || || ||||| |  ||||||||||||||    
T  43058779 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacc 43058700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 11091064 - 11090887
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| |||| ||||| |||||||| | ||||||||  |||||  || ||||||  || |    
T  11091064 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcc-cttttaaaacagaacaaaacggtccttcaattatcattattgt 11090966  T
Q  157 tgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    || | |||| |||||| ||||||||||||| ||||| ||||||||| || ||||||||||| |  ||||||||||||||    
T  11090965 tgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacc 11090887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 40027597 - 40027507
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||| ||| || || ||||| |  ||||||||||||||    
T  40027597 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacc 40027507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 3824251 - 3824114
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgttttttgc 159  Q
    ||||||| |||||||||| || |||||| |||| ||||  ||| |||| |||||  |||||||||||||||||  | || ||  ||||||||||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttttttgc 3824152  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacg 197  Q
    | ||||||| ||| | || |||||   |||||||||||    
T  3824151 aattttagttctaacccccattttatcctccaaaaacg 3824114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 649881 - 649801
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct 140  Q
    |||||||||||||||||||||  ||||||||||| ||||  ||||||||  |   | |||||||||||||||||| |||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 28617158 - 28617011
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| ||||| || | |||||||| | ||||||||| |||||  || |||||| ||| |    
T  28617158 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtc-cttttaaaacagaacaaaatggtccttcaattatcatttttgt 28617060  T
Q  157 tgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaa 204  Q
    |||| |||| ||| |||||||||||||| ||||||| ||||||||||||    
T  28617059 tgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaa 28617011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 3025909 - 3025830
Alignment:
Q  156 ttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||| ||||||| ||| |||||||| ||||| ||||| |  | ||||||||||||    
T  3025909 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacc 3025830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 22374782 - 22374695
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacct 231  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| | ||| |||||||| ||||| ||||| |  |||||||||||    
T  22374782 tatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagacct 22374695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 43215805 - 43215868
Alignment:
Q  154 ttttgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || |||| |||||||||||||||||||| | |||| ||||| |||||    
T  43215805 ttttgcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagtttta 43215868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 5035922 - 5035972
Alignment:
Q  117 ttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagtttta 166  Q
    |||||||||||||||||  |||| ||||||||||| |||||||||||||||    
T  5035922 ttttaaatcgaacaaaaccgtccctaaactatcatattttttgcagtttta 5035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 14432227 - 14432301
Alignment:
Q  142 aactatcatgttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   |||||||||||||||||| ||||| |||||    
T  14432227 aactatcatttttgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 14432301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 239809 - 239721
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagaccta 232  Q
    |||||| ||| ||||  |||| ||| |||||||||||||||| ||||| |||||||||||| || || ||||| |  ||||||||||||    
T  239809 tatcatttttgttgcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagaccta 239721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 45048691 - 45048535
Alignment:
Q  48 ttatcaattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactat 147  Q
    |||| ||||| | ||||||||||||||||||||| |||||||||||| |||  |||||||| || |||||||  ||||||||||||  ||||||||||||    
T  45048691 ttatgaattaggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcctaaactat 45048592  T
Q  148 catgttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45048591 catgttttttgcagttttagtcctacctcctattttcaactccagaaacgcagagaa 45048535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 44802716 - 44802558
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||||||||  ||| |||| |||||||||| |||  ||||||||| |||| ||||||||||||||||||    
T  44802716 gcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtttttt 44802617  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| |||||||||||||||||||||| |||| |||| || |||||||||||    
T  44802616 gcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaatttta 44802558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 44291303 - 44291445
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--ttttt 156  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||| |||| ||||||||||||  |||||    
T  44291303 cttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgttttttt 44291402  T
Q  157 tgcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    ||||||||||||| |||||||| ||||||| |||| |||||||    
T  44291403 tgcagttttagtcatacctcctgttttcaaatccagaaacgca 44291445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 23526659 - 23526811
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||  | |||| |||||||| ||||||    
T  23526659 gcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcat-tttttt 23526757  T
Q  158 gcagttttagt-cctacctcctattttcaactccaaaaacgcagagaagtgaca 210  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||    
T  23526758 gcagttttagtccctgccccctattttcaactccaaaaacgcacagaaatgaca 23526811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 17088690 - 17088527
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg 151  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||  |||||||| |||||||||| ||||| |||||||  || |||||||||| ||     
T  17088690 aattaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactat-ata 17088592  T
Q  152 ttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||| ||||||||||||||||| || | |||||||||||| ||||| |||||    
T  17088591 ttttttgcagttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagtttta 17088527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 29021415 - 29021268
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatca-tg 151  Q
    |||| |||||||| |||||||||||||||||||||||||||||||  |||||| | |||||||||| |||||||||||||| || |||||| |||||  |    
T  29021415 attaggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacgg 29021316  T
Q  152 ttttttgcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||||    
T  29021315 ttttttgcagttttagtcttaccccctattttcaactccagaaacgca 29021268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 17088147 - 17088297
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatg-----tt 153  Q
    ||||||||||||| |||||| || ||||||||||||||||  ||||||||| ||||||||| |||||||||||||  ||||||||||||||||     ||    
T  17088147 gcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcctaaactatcatgttttttt 17088246  T
Q  154 ttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    ||||||| ||||||||||||||||||||||||||| || ||| ||||||||    
T  17088247 ttttgcaattttagtcctacctcctattttcaacttcagaaatgcagagaa 17088297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 39485068 - 39485223
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||||||||||||||| ||||||||| ||||||  ||||||||  | ||||||| |||||||||||||| || |||||||||| |||||||||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgc 39485166  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| ||||||||||||||| || |||| ||||||  ||||| |||||    
T  39485167 agttttagtcctatctcctattttcaacttcagaaacacagagagatgacagtttta 39485223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 45048158 - 45048301
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||||||||||||||  ||||||||||| || |  ||||||||| | |||||||||||| ||||||||| |||| |||||||| |||||||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactat-atgttttttgc 45048256  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||    
T  45048257 agttttagtcctacctcatattttcaactccagaaacgcatagaa 45048301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 195
Target Start/End: Complemental strand, 23527074 - 23526938
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgttttttg 158  Q
    |||||||| ||||||| |||||||||||||| |||||||  |||||||| |||||| |||||||||||||||||  ||| |||||||||||| |||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcat-ttttttg 23526976  T
Q  159 cagttttagtcc-tacctcctattttcaactccaaaaa 195  Q
    |||||||||||| | || ||||||||||||||||||||    
T  23526975 cagttttagtccgtgccccctattttcaactccaaaaa 23526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 2868253 - 2868095
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||||||||||||||| | ||  ||||||||  | |||||||||||||||||||||| || |||| ||||| |||||||||    
T  2868253 gcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactat-atgtttttt 2868155  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||| ||||||| | |||||||| |||||    
T  2868154 gcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagtttta 2868095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 44954771 - 44954613
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||| ||||||||||| ||||  |||||| | || ||| ||||||||| ||||||||  ||| |||||||| |||||||||    
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactat-atgtttttt 44954673  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  44954672 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 44954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 50926232 - 50926371
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatca-tgtttttt 157  Q
    |||||||||| ||||||||||| ||||||||||||||||  |||||  | || ||||||| |||||||||||||| || |||||||||||| | ||||||    
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcattttttttt 50926331  T
Q  158 gcagttttagtcc-tacctcctattttcaactccaaaaac 196  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  50926332 gcagttttagtccttacctcctattttcaactccagaaac 50926371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 8230184 - 8230028
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||| ||||||| ||| ||||||||||   |||  ||||||||||| |||||||||||||||||||||| || |||||||||| |||||||||||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 8230086  T
Q  160 agttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  8230085 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtttta 8230028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 30786772 - 30786924
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctca-gaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttt 156  Q
    ||||||||||||||||||| ||  ||||||||||| |||| ||||| ||||  | |||||||||||||||||||||| |||| |||||||| ||||||||    
T  30786772 gcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 30786870  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgac 209  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||    
T  30786871 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgac 30786924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 44291831 - 44291718
Alignment:
Q  84 attttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgttttttgcagttttagtcctacctcctattt 182  Q
    |||||||||||||||  |||||||| ||| ||||||||||||||| ||||| ||| |  ||||||||||||||||||||||||||||||||| |||||||    
T  44291831 attttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgttttttgcagttttagtcctaccccctattt 44291732  T
Q  183 tcaactccaaaaac 196  Q
    ||||||||| ||||    
T  44291731 tcaactccagaaac 44291718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 17641912 - 17641751
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaacta----tcatgtttt 155  Q
    ||||||||||||||||||||| ||||||||||| ||||  |||||||| || |||||||||||||||||||||| || |||||||||    |  | ||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttattttttt 17641813  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  17641812 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 17641751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 1837506 - 1837664
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  |||||||| || ||||  ||| || | ||  |||||||||||||||||||||||| |||||||||| |||||||||    
T  1837506 gcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactat-atgtttttt 1837604  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || |||||||||||||||| ||||||| | || ||||| |||||    
T  1837605 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagtttta 1837664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 9833670 - 9833551
Alignment:
Q  86 tttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacctcctattttc 184  Q
    |||||||| ||||  ||||| || |||||||||| |||||||||||||| |||| |||| ||| |||||||||||||||||||||||||| |||||||||    
T  9833670 tttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttttgcagttttagtcctaccccctattttc 9833571  T
Q  185 aactccaaaaacgcagagaa 204  Q
    ||||||| ||||||| ||||    
T  9833570 aactccagaaacgcacagaa 9833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 48173749 - 48173888
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatg-ttttt 156  Q
    ||||||||  || |||||||| | |||||||||||| ||| |||||||||| ||||||||| |||||||||||||| |  |||||| ||||||| |||||    
T  48173749 gcttaattgtacctttggtccacgcattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcgaccctaaattatcatgtttttt 48173848  T
Q  157 tgcagttttagtcctacctcctattttcaactccaaaaac 196  Q
    |||| |||||||| |||| |||||||||||||||||||||    
T  48173849 tgcacttttagtcataccccctattttcaactccaaaaac 48173888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 50926786 - 50926648
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||||||||||||| || ||||||||||||||||  ||||||||   | |||||| |||||||||||||  || ||||||||||||| ||||||    
T  50926786 gcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcat-tttttt 50926688  T
Q  158 gcagttttagtcc-tacctcctattttcaactccaaaaac 196  Q
    ||||||||||||| |||| |||||||||||||||| ||||    
T  50926687 gcagttttagtccttaccccctattttcaactccataaac 50926648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 37505068 - 37505227
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||| |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  37505068 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 37505166  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||  | |||||||||||||||||||| | | |||| ||||| |||||    
T  37505167 tgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagtttta 37505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 44582059 - 44582216
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgttttttg 158  Q
    ||||||||||||||||||||| |||||||||||| || |  ||| ||||  | |||||||||||||||||||||| ||| ||||| ||| ||||||||||    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattat-atgttttttg 44582157  T
Q  159 cagttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| |||  | ||| |||||||| ||||||| | || |||||||||||    
T  44582158 cagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaatttta 44582216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 29020881 - 29021022
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||| ||| | ||||| ||  ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||  ||| |||| |||||||||||||    
T  29020881 gcttaattgcacatatggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgtttttt 29020980  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    ||| |||||||  |||  |||||||||| |||||||||||||    
T  29020981 gcaattttagtgttactccctattttcacctccaaaaacgca 29021022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 16298683 - 16298814
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||| |||||| |||  ||||||||||| ||||  ||| |||| || |||||||||||||||||||||| || |||||||||| |||||||||    
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 16298781  T
Q  158 gcagttttagtcctacct-cctattttcaactc 189  Q
    ||||||||||||||| || ||||||| ||||||    
T  16298782 gcagttttagtcctatctacctatttccaactc 16298814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 216
Target Start/End: Original strand, 9992148 - 9992314
Alignment:
Q  52 caattatgcttaattacacttttggtcctcaca-ttttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatca 149  Q
    |||||| ||||||||||||||||||||||  || ||||||||| ||||   |||||||  |  || |||||||||||||||||| |||| |||||||| |    
T  9992148 caattaggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactat-a 9992246  T
Q  150 tgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||||| || ||||||| |||||||| |||| || |||| ||||| |||||    
T  9992247 tgttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 9992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 9992700 - 9992542
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||| | ||||  ||||||||  |  || |||||||||||||||||| || | |||||||| |||||||||    
T  9992700 gcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactat-atgtttttt 9992602  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||| ||||||||| || |||||||||||||||| ||||||  |||| ||||| |||||    
T  9992601 gcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagtttta 9992542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 10278550 - 10278708
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-tttttt 157  Q
    |||||||||||||||||||||  ||||||||||| ||||  ||| || |  | |||||||||||||||||||||| || |||||||||| ||| ||||||    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttt 10278648  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || || |||| |||||||| ||||||| | || |||||||||||    
T  10278649 gcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaatttta 10278708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 25274760 - 25274869
Alignment:
Q  62 taattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgttttttgca 160  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||| |||||||||| |||||||||||||  | |||||||||| |||||||||||||    
T  25274760 taattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta-catgttttttgca 25274858  T
Q  161 gttttagtcct 171  Q
     |||| |||||    
T  25274859 tttttggtcct 25274869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 39485583 - 39485485
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtttttt 157  Q
    ||||||||| ||||||| ||||| |||||| | |||||||  ||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  39485583 gcttaattatacttttgatcctcgcattttaatcagctcatgaaaatggttctgcctctttcaaatcaaacaaaactgtcctaaactatcatgtttttt 39485485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 21938566 - 21938722
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    |||||||||||||||||| |  |||||||| || ||||  |||||| |  |  || |||||||||||||||||| |||| |||||||| |||||||||||    
T  21938566 ttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactat-atgttttttgc 21938664  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  21938665 agttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtttta 21938722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 8229638 - 8229799
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg---ttt 154  Q
    ||||||||||||||||| |||||||||||||| || ||||  |||||| || | | |||||||||||||| ||||| ||| ||||||||| |||   |||    
T  8229638 gcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactat-atgtttttt 8229736  T
Q  155 tttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||| || |||||||  ||||||| ||||||| |||| ||||| |||||    
T  8229737 tttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 8229799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 29438931 - 29439070
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||  ||| |||||    
T  29438931 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta-aatgtttttt 29439029  T
Q  157 tgcagttttagtcctacctc-ctattttcaactccaaaaac 196  Q
    |||||||||||||||| ||| |||||||||| || ||||||    
T  29439030 tgcagttttagtcctatctctctattttcaattcaaaaaac 29439070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 50304441 - 50304529
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactat 147  Q
    |||||||||||||||||||||| ||||||||||| ||||  |||||||| || |||||||||||||||||||||| ||| |||||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactat 50304529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 52336055 - 52335897
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||||| |||||||| ||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| || ||||||    
T  52336055 gcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atttttttt 52335957  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||| ||||||| | || ||||| |||||    
T  52335956 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagtttta 52335897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 2867913 - 2868022
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgttttttg 158  Q
    |||||||||| |||||||| || ||||||||||| ||||  |||||| | ||  |||||||||||||||||||||||||  |||||||| ||||||||||    
T  2867913 cttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactat-atgttttttg 2868011  T
Q  159 cagttttagtc 169  Q
    |||||||||||    
T  2868012 cagttttagtc 2868022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 444096 - 443956
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgtttttt 157  Q
    ||||||||| ||||||| || |  ||||||||||| ||||  ||| | || || |||||||||||||||||||||| | ||||||||||| |||||||||    
T  444096 gcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactat-atgtttttt 443998  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgc 198  Q
    ||||||||||||||| || ||||||| ||| |||| ||||||    
T  443997 gcagttttagtcctatctccctatttccaattccataaacgc 443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 34555926 - 34555767
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--ttttt 156  Q
    ||||||||||||||| |||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||  |||||    
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttt 34555828  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  34555827 tgcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagtttta 34555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 37421163 - 37421321
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt-- 157  Q
    |||||||||||||||||| |  |||||||||||  |||  ||| ||||  | |||||||||||||||||||||| |||| |||||||| |||||||||      
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttt 37421261  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| ||  ||| ||||| |||||||||||||||| |||| ||||| |||||    
T  37421262 gcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagtttta 37421321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 34555380 - 34555528
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg--tttt 155  Q
    ||||||||||||||||||||||  ||||||||| | |||   ||| ||||  | |||||||||||||||||||||| || |||||||||| |||  ||||    
T  34555380 gcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 34555478  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaa 204  Q
    || |||||||||||||| || ||||||| |||||||| ||||||| ||||    
T  34555479 ttacagttttagtcctatctccctatttccaactccagaaacgcacagaa 34555528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 15173637 - 15173461
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||||||||||   ||||| ||  |||| |||| ||||  ||||| ||| |||  ||||||||| |||||  || |||||| ||| ||    
T  15173637 gcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcct-tttaaaacagaacaaaatggtccttcaattatcatttttgtt 15173539  T
Q  158 gcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||| |||| |||||||||||||||||| ||||| | |||||||||||| ||||| ||||| |  ||||||||||||||    
T  15173538 gcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacc 15173461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 16299169 - 16299069
Alignment:
Q  117 ttttaaatcgaacaaaattgtcct-aaactatcatgttttttgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaattt 214  Q
    |||| ||| ||||||||| ||||| ||||||| |||||||||||||||||||||||| |||| ||||| |||||||| ||||||| |||| |||||||||    
T  16299169 tttttaattgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattt 16299071  T
Q  215 ta 216  Q
    ||    
T  16299070 ta 16299069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 44954229 - 44954385
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgttttttgc 159  Q
    ||||||||| |||| |||| | ||||||||||| ||||  |||||||| || ||| ||||||||| |||||||| |||  |||| ||| |||||||||||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattat-atgttttttgc 44954327  T
Q  160 agttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| || ||| || ||| |||||||| ||||||| |||| ||||| |||||    
T  44954328 agttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagtttta 44954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 36228794 - 36228921
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatca--tgtttt 155  Q
    |||||||| |||||||| |||||||||||| | ||||||| |||||||||  | |||||||||||| ||||||||   | ||||||||||||  | ||||    
T  36228794 gcttaattgcacttttgatcctcacattttaatcagctcacaaaaatggtcttacctcttttaaattgaacaaaacgatccctaaactatcatttttttt 36228893  T
Q  156 ttgcagttttagtcctacctcctatttt 183  Q
    |||||||||||||| |||| | ||||||    
T  36228894 ttgcagttttagtcataccccatatttt 36228921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 36229513 - 36229385
Alignment:
Q  71 ttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgcagttttagtc 169  Q
    ||||||||||| ||||||  | |||| |  ||||||||  || |||| |||||| ||||||| |  |||| |||||||||||||||||||||||||||||    
T  36229513 ttttggtcctcgcattttaccaagcttacgaaaatggtcttgtctctattaaattgaacaaactgatccttaaactatcatgttttttgcagttttagtc 36229414  T
Q  170 ctacctcctattttcaactccaaaaacgc 198  Q
     ||||||||||||||  ||||||| ||||    
T  36229413 atacctcctattttcccctccaaacacgc 36229385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 23340184 - 23340342
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgtttttt 157  Q
    ||||||||||||||||| || |  ||||||||||| ||||  ||| ||||  |  ||||||||||||||||||||| | || |||||||| || ||||||    
T  23340184 gcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactat-atatttttt 23340282  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || |||| ||||| |||||||| ||||||  |||| ||||| |||||    
T  23340283 gcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagtttta 23340342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 37505612 - 37505455
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| | ||||||||||   |||||||||| ||||  ||| || | ||  |||||||||| | |||||||| |||| |||||||| ||||||||     
T  37505612 gcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactat-atgttttt- 37505515  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| |||| |||||||||||||||||||||| | || ||||| |||||    
T  37505514 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagtttta 37505455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 39154477 - 39154387
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| || || |||||||||||| ||||||||||| |  ||||||||||||||    
T  39154477 tatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacc 39154387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 6224693 - 6224858
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactat-catg 151  Q
    |||||| ||||||||| ||||| ||||  ||||||||||| |||| |||||||||| |   | |||||||||||||||||| |||| |||| |||  ||     
T  6224693 attatgtttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatata 6224792  T
Q  152 ttttttgcagttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||||||||||| || ||| |||||| |||||||| ||||||| | || ||||| |||||    
T  6224793 ttttttacagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagtttta 6224858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 48174242 - 48174119
Alignment:
Q  84 attttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt-------gcagttttagtcctacct 175  Q
    ||||||| |||||||  |||| |||| || |||||||||||| |||||||  |||| ||||||||||||||||||       ||||||||||||| |||     
T  48174242 attttgatcagctcacgaaaacggttctgtctcttttaaatcaaacaaaaccgtccctaaactatcatgtttttttttttgtgcagttttagtcccaccc 48174143  T
Q  176 cctattttcaactccaaaaacgca 199  Q
    |||||||||||||||| |||||||    
T  48174142 cctattttcaactccagaaacgca 48174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 4080026 - 4080180
Alignment:
Q  63 aattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgcag 161  Q
    ||||||||||||||||||  ||| ||||||| ||||  ||| || |  | ||| |||||||||||||||||| || |||||||||| ||||||||| |||    
T  4080026 aattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactat-atgttttttacag 4080124  T
Q  162 ttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||| || || ||||||| |||||| | ||||||| | || ||||| |||||    
T  4080125 ttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagtttta 4080180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 4636428 - 4636338
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||| ||||||||||||||| ||||| |||||||||||| ||||||||||| |   |||||||||||||    
T  4636428 tatcatttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacc 4636338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 33144005 - 33144095
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| |||||||||  ||| |||||||||||||||||| ||||| | |||||||||||| ||||| ||||| |  ||||||||||||||    
T  33144005 tatcattttttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacc 33144095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 50970279 - 50970456
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| ||||  ||| ||||||||||| ||||||||  |||||  || |||||| ||| |    
T  50970279 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc-tcttttaaatcagaacaaaacggtccttcaattatcatttttgt 50970377  T
Q  157 tgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||| ||||| ||||  |  ||||||||||||||    
T  50970378 tgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacc 50970456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 10279092 - 10278937
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  | ||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||      
T  10279092 gcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt-- 10278996  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     |||||||||||||| |||| ||| | |||||||| |||| || |||| ||||| |||||    
T  10278995 -cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagtttta 10278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 17641408 - 17641524
Alignment:
Q  101 aaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgc 198  Q
    |||||||| || ||| |||||||||||||||||||| || |||||||| | |||||||| ||||||||| ||| || ||||||| |||||||| ||||||    
T  17641408 aaaatggtcataccttttttaaatcgaacaaaattgttcttaaactat-acgttttttgtagttttagttctatctccctatttccaactccagaaacgc 17641506  T
Q  199 agagaagtgacaatttta 216  Q
    | | || ||||| |||||    
T  17641507 acataaatgacagtttta 17641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 29307399 - 29307327
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| |||||    
T  29307399 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 29307327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 50305328 - 50305189
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaac--tatcatgtttttt 157  Q
    ||||||||||||||||| ||  |||||| |||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||  |||  | ||||||    
T  50305328 ttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttttt 50305229  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaac 196  Q
    |||||||||||| || || |||||||||||||||| ||||    
T  50305228 gcagttttagtcatatctccctattttcaactccataaac 50305189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 9019507 - 9019360
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||||||||||   ||||||||  |||| |||| ||||| ||||  ||| |||  ||||||||  ||| |  || |||||| ||| ||    
T  9019507 gcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgtt 9019408  T
Q  158 gcagttttagtcctacctcctattttc-aactccaaaaacgcagagaa 204  Q
    ||| |||| |||||||||||||||||| ||| ||| ||||||||||||    
T  9019407 gcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaa 9019360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 50419393 - 50419504
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    |||||| |||||||||||||| |||||  |||| |||| ||||||||| ||| || ||| |||||||||||| | |||| |  ||||||||||||||| |    
T  50419393 ttaattgcacttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaagtagtccttgtactatcatgttttttac 50419492  T
Q  160 agttttagtcct 171  Q
    | |||| |||||    
T  50419493 acttttggtcct 50419504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 15646280 - 15646370
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||| ||||||||| ||||| ||| |||||||| ||||| ||||| |  ||||||||||||||    
T  15646280 tatcatttttgttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacc 15646370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 17112369 - 17112459
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||||| || ||| | ||||| |  ||||||||||||||    
T  17112369 tatcatttttattgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacc 17112459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 17433672 - 17433582
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||| || |||||||||||| ||||| |||||    ||||||||||||||    
T  17433672 tatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacc 17433582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 21856130 - 21856220
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| ||||  ||||| ||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  21856130 tatcatttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 21856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 29870076 - 29869986
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||  | |||||||||||| ||||| ||||| |  ||||||||||||||    
T  29870076 tatcatttttgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacc 29869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 5539814 - 5539994
Alignment:
Q  56 tatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgtt 153  Q
    ||||||||||||||||||||||||||   ||||| ||  ||||  ||| ||||  |||| |||||||| | ||||||||  |||||  || |||||| ||    
T  5539814 tatgcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttt 5539912  T
Q  154 ttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    | ||| | |||| |||||||||||||||||| ||||||| ||||||| |||| || || ||||| |  ||||||||||||||    
T  5539913 tgttgtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacc 5539994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 29439471 - 29439333
Alignment:
Q  55 ttatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-- 151  Q
    ||||| |||||| ||||||||||||   |||||||| || ||||  |||||| |  |  || |||||||||||||||||| |||| |||||||| |||      
T  29439471 ttatgtttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtt 29439373  T
Q  152 ttttttgcagttttagtcctacctcctattttcaactcca 191  Q
    |||||||||| |||||||||| |||||||||  |||||||    
T  29439372 ttttttgcagatttagtcctatctcctatttcaaactcca 29439333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 44582603 - 44582444
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-tttttt 157  Q
    |||||||||||||||||| ||  |||||||| || ||||  |||||||| ||  |  ||| |||||||||||||| |||  |||||||| ||| ||||||    
T  44582603 cttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactat-atgttttttt 44582505  T
Q  158 gcagttttagtcctacct-cctattttcaactcc-aaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| |  || |||||||||| |||| ||||||||| |||| ||||| |||||    
T  44582504 gcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagtttta 44582444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 26859147 - 26859209
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagt 206  Q
    |||||| ||| ||||| |||| |||||||||| ||||||||| ||||| ||||||||||||||    
T  26859147 tatcatttttgttgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagt 26859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 157
Target Start/End: Complemental strand, 30787349 - 30787245
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg 151  Q
    ||||| ||||||||||||||||| ||||  ||||| || || ||||  |||||||| ||  || ||| |||||||||||||| |||| |||||||| |||    
T  30787349 aattaggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactat-atg 30787251  T
Q  152 tttttt 157  Q
    ||||||    
T  30787250 tttttt 30787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 58 - 200
Target Start/End: Complemental strand, 35579431 - 35579289
Alignment:
Q  58 tgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtttttt 157  Q
    |||||||||||||||||| ||||| |||||||| |||||||  |||||| |||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  35579431 tgcttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtcctaaactatcatgtttttt 35579332  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcag 200  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  35579331 gcagttttagtcatacctcctattttcaactctaaaaacgcag 35579289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 9393738 - 9393921
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgc 159  Q
    |||||||||||||||| ||||| |||||||| |||||||  ||||| ||  ||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcctaaactatcatgttttttgc 9393837  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctaccgcctttgct 243  Q
     ||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||| | | || |||||||||| ||| ||||    
T  9393838 tgttttagtcctacctcctattttcaactccagaaacacagtgaaatgacagttttaagcaattatagacctaccccctatgct 9393921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 35578902 - 35579057
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgca 160  Q
    |||||||||||||||||| |  |||||||||||||||| |||||||||  |||| |||| |||||||||||||  ||| |||||||||||||||||||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcataaactatcatgttttttgca 35579001  T
Q  161 gttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||    
T  35579002 gttttaatcctacatcctattttcaactccagaaacgcagagaaatgacattttta 35579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 34595317 - 34595159
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||  ||| |||||||||||||||||||| || |||||||||||||| |||||    
T  34595317 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatg-ttttt 34595219  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| ||||| || |||||||||||||| ||||||| |||| ||||| |||||    
T  34595218 gcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagtttta 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 4477703 - 4477879
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||| ||| |||| ||||||||||||  |||  ||||||||   ||||||||||||| ||| ||||| |||| |||||||||||||||| |    
T  4477703 gcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatgtttt-t 4477801  T
Q  158 gcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||| ||||  |||||||||||||||||    
T  4477802 gcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacc 4477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 45815566 - 45815465
Alignment:
Q  104 atggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt-ttttgcagttttagtcctacctcctattttcaactccaaaaacgcagag 202  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  45815566 atggttctgcctcttttaaatcgaacaaaatcgtcctaaactatcatgtttttttgcagttttagttctacctcttattttcaactccagaaacgcagag 45815467  T
Q  203 aa 204  Q
    ||    
T  45815466 aa 45815465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 49064035 - 49064167
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||||||||||||  |||||||||||||||  ||||||||  ||||||||| |||| |||||||||  ||| |||||||||||| |||||    
T  49064035 gcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatg-ttttt 49064133  T
Q  158 gcagttttagtcctacctcctattttcaactcca 191  Q
    ||| ||||||||||| ||||||||||||||||||    
T  49064134 gcacttttagtcctaactcctattttcaactcca 49064167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 786783 - 786942
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  |||||||| || ||| ||||||||||||||||||| ||| |||||||| ||| |||||    
T  786783 gcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactat-atgtttttt 786881  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| |||||||||| |||||    
T  786882 tgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagtttta 786942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 26026314 - 26026477
Alignment:
Q  55 ttatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-t 152  Q
    ||||| ||||||||||||||||||||   |||||||||||||||  ||| |||| || |||||||||||||||||||||| |||| |||||||| ||| |    
T  26026314 ttatgtttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactat-atgtt 26026412  T
Q  153 tttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||| || || |||||||||||||||| ||||||| |||| ||||| |||||    
T  26026413 tttttgcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagtttta 26026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 9394274 - 9394118
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||  | ||| ||| |||||||||||||  |||| |||||||| || ||||||    
T  9394274 gcttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactat-atatttttt 9394177  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| ||||||||| ||||| ||||||| || |||| ||||| |||||    
T  9394176 gcagttttagtcctatctcctatttccaacttcaaaaacacaaagaaatgacagtttta 9394118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 39388816 - 39388671
Alignment:
Q  56 tatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-tt 153  Q
    |||||||||||||||||||||||||  ||||||||||| ||||  ||| | ||  | |||||||||||||||||||||| ||| ||||||||| ||| ||    
T  39388816 tatgcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgttt 39388718  T
Q  154 ttttgcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||    
T  39388717 ttttgcagttttagtcctatctccctattttcaactccaaaaacgca 39388671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 7732489 - 7732647
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||| ||||||||||  |||||||| || ||||  ||| ||||  | |||||||||||||||||||||| |||| |||||||| |||||||||    
T  7732489 gcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 7732587  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||||||||||| ||||||| | || ||||| |||||    
T  7732588 gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagtttta 7732647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 9181534 - 9181691
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| || |||||||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 9181691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 39136687 - 39136824
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||||||||||||||  ||||||||| || |||||| |||||||||||||| || |||||||||||||| ||| |    
T  39136687 gcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactatcatg-tttat 39136785  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaac 196  Q
    ||| ||||||||||| |||  ||||||||||||| ||||    
T  39136786 gcacttttagtcctaactctaattttcaactccagaaac 39136824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 5334363 - 5334243
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttg 158  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||| ||  | |||||||||||||||||||||| || |||||||||| || |||||||    
T  5334363 cttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atattttttg 5334265  T
Q  159 cagttttagtcctacctcctat 180  Q
    |||||||||||| ||| |||||    
T  5334264 cagttttagtccaaccacctat 5334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 25637741 - 25637585
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 25637643  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || ||||||| |||||||| |||| || |||| ||||| |||||    
T  25637642 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 25637585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 33880622 - 33880762
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttg 158  Q
    ||||||| || |||||||||||  ||||||||||||||| |||||| ||| ||||||||| |||||||||||||  || |||||| |||||| |||||||    
T  33880622 cttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatattttttg 33880721  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    || ||||||||||||| | |||||||| || || |||||||    
T  33880722 cacttttagtcctaccccttattttcaccttcagaaacgca 33880762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 48248137 - 48247978
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| |||| |||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  48248137 gcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 48248039  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| | || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  48248038 tgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagtttta 48247978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 2758243 - 2758085
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||| |||||||  || ||||  ||||||||| | |||||||||||||||||||||| |||| |||||||| |||||||||    
T  2758243 gcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atgtttttt 2758145  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| ||||||| || || |||||||  ||||||| ||||||| | || ||||| |||||    
T  2758144 gcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagtttta 2758085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 16081844 - 16081686
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||| |||||||||  ||||||||||| ||||  ||| || |  | ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  16081844 gcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttttt 16081746  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||||||||||| | || ||||| |||||    
T  16081745 gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagtttta 16081686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 45815345 - 45815466
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||||||    |||||||| |||||||||| |||||||||||||  || |||||||||||||| |||||    
T  45815345 gcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtttttt 45815441  T
Q  157 tgcagttttagtcctacctcctatt 181  Q
    ||||||||||||| |||||| ||||    
T  45815442 tgcagttttagtcttacctcttatt 45815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 28688041 - 28687886
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||| ||||||||||  ||||||||||| ||||  ||| || | || |||||||||||||||||||||| || |||||||||| |||||||||||    
T  28688041 ttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 28687944  T
Q  160 agttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | ||||||||||| | |||||||| |||||||| ||||||| |||| ||||| |||||    
T  28687943 acttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagtttta 28687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 7733032 - 7732877
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  |||||| |  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  7733032 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 7732934  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatt 213  Q
    ||| ||||||||||| || |||||||||||||||| ||| ||| |||| | ||||||    
T  7732933 gcaattttagtcctatctccctattttcaactccataaatgcacagaaataacaatt 7732877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 5333881 - 5333991
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  ||||||||  | |||||||||||||||||||||| || |||||||||| |||||||||    
T  5333881 gcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 5333979  T
Q  158 gcagttttagtc 169  Q
    ||||||||||||    
T  5333980 gcagttttagtc 5333991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 16081300 - 16081458
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||   |||||||||| ||||   |||||||  |  || |||||||||||||||||| |||| ||||||||  ||||||||    
T  16081300 gcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-ttgtttttt 16081398  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| ||||||||||||| || |||| ||||| |||||    
T  16081399 gcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagtttta 16081458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 5745642 - 5745798
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaat-tgtcctaaactatcatgttttttgc 159  Q
    ||||||||||||||||||||  ||||||||||| ||||  |||||||| ||  || |||||||||||||||||| | || |||||||| |||||||||||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactat-atgttttttgc 5745740  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| || || ||||||| | |||||| ||||||| | || ||||| |||||    
T  5745741 agttttagtcttatctccctatttcctactccagaaacgcacataaatgacagtttta 5745798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 25637193 - 25637357
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg- 151  Q
    |||| ||||||||||||||||||||||  ||| ||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| |||     
T  25637193 attaggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgt 25637291  T
Q  152 ttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| ||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  25637292 ttttttgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 25637357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 27245204 - 27245351
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || || |||| || ||| |||||    
T  27245204 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccat-atgtttttt 27245302  T
Q  157 tgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||||| |||| ||||| |||||||| ||||||| ||||    
T  27245303 tgcagttttagtcctatctccttatttccaactccagaaacgcacagaa 27245351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 15712366 - 15712524
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| || ||||||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atatttttt 15712464  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | ||||||||||||| || ||||||| |||||| | ||||||| | || ||||| |||||    
T  15712465 gtagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagtttta 15712524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 16917714 - 16917824
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  |||||||| ||  || ||||||||||||||||||  ||| |||||||| |||||||||    
T  16917714 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtttttt 16917812  T
Q  158 gcagttttagtc 169  Q
    ||||||||||||    
T  16917813 gcagttttagtc 16917824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 24929853 - 24929690
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatca----tgtt 153  Q
    ||||||||||| ||||||||||  ||||||||||| ||||  ||| ||||  | ||||||||||||| |||||||| |||| ||||||||      | ||    
T  24929853 gcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatattttt 24929754  T
Q  154 ttttgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||| |||| ||||| |||||    
T  24929753 ttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagtttta 24929690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 28687594 - 28687735
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||||||||| |  ||||||||||| ||||  ||||||||| |  || || ||||||||||||||| |||| |||||||| || ||||||    
T  28687594 gcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactat-atttttttt 28687692  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgca 199  Q
    |||||| |||||||| | |||||||| |||||||| |||||||    
T  28687693 gcagttctagtcctatcttcctatttccaactccagaaacgca 28687735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 34594585 - 34594714
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||||||||||||||||| ||||||||| | ||||  |||||  |   || |||||| |||| ||||||||  ||| |||||||||||||||| ||    
T  34594585 cttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatgtttt-tg 34594683  T
Q  159 cagttttagtcctacctcctattttcaactc 189  Q
    |||||||||||||||| ||||||||||||||    
T  34594684 cagttttagtcctaccccctattttcaactc 34594714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 14311830 - 14311674
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgc 159  Q
    |||||||||||||| ||| |  || |||||||| |||| |||||||||  |  || |||||||||||||||||| ||| | ||||||| |||||||||||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactat-atgttttttgc 14311732  T
Q  160 agttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| || |||| ||||| |||||| | ||||||| |||| |||||||||||    
T  14311731 agttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaatttta 14311674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 26048491 - 26048334
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||| ||||  | ||||||||| ||||  ||| ||||  | ||||||||||||| ||||||||||||| |||||||| ||| |||||    
T  26048491 gcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactat-atg-ttttt 26048394  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||||||| ||| | || ||||| |||||    
T  26048393 gcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagtttta 26048334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 33881132 - 33880972
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaatt--gtcc-taaactatcatgtttttt 157  Q
    |||||| |||||||| ||||| ||||||||| || |||  ||||||||| ||  | |||| |||||||||||||   |||| ||||||||||||||||||    
T  33881132 ttaattgcacttttgatcctcgcattttgactagttcacgaaaatggttctgtatgttttcaatcgaacaaaatctcgtccataaactatcatgtttttt 33881033  T
Q  158 --gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
      |||||||||||| || | |||||||||||||||| ||||||| | || ||||| |||||    
T  33881032 ttgcagttttagtcttatcccctattttcaactccagaaacgcacataaatgacagtttta 33880972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 34533879 - 34533969
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||  |||||||||||||||||||| |||||||||||||||||| ||||| ||||| | |||||||||||||||    
T  34533879 tatcatttttgttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacc 34533969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 35161342 - 35161205
Alignment:
Q  64 attacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttttgcag 161  Q
    |||||||||||||||||  ||||||||||| ||||   || ||||  | |||||||||||||||||||||| || |||||||||| ||| ||||||||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcag 35161244  T
Q  162 ttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    |||||||| || || ||||||| |||||||| |||||||    
T  35161243 ttttagtcatatctccctatttccaactccataaacgca 35161205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 39137078 - 39136980
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttt 156  Q
    ||||||||||||||||| |||||  ||||||||| |||||  ||||||||  |||||||||||||||||||||||| |||| |||||| |||| |||||    
T  39137078 gcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaactctcatattttt 39136980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 9181957 - 9181796
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg---ttt 154  Q
    ||||||||||||||||| ||||  |||||||||||  |||  ||| || | || |||||||||||||||||||||| || |||||||||| |||   |||    
T  9181957 gcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 9181859  T
Q  155 tttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||| |||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  9181858 tttccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 9181796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 32427471 - 32427407
Alignment:
Q  152 ttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||    
T  32427471 ttttttgtagttttagtccttcctcctattttcaactctaaaaacgcagagaaatgacagtttta 32427407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 48247588 - 48247750
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatca---tgttt 154  Q
    ||||||||||||||||||||||  |||||||| || ||||  ||| ||||  | ||||||||||||| |||||||| |||| |||| |||     | |||    
T  48247588 gcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatattttttt 48247687  T
Q  155 tttgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||| ||||| |||||||||||||||| |||| ||||| |||||    
T  48247688 tttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagtttta 48247750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 19590982 - 19590892
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  19590982 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 19590892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 37787224 - 37787134
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||| ||||  | |||||||||||||||    
T  37787224 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacc 37787134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 2658840 - 2659016
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||| ||||||   ||||| ||  ||||  ||| ||||  ||||  ||| |||| ||||||||| |||||  || |||||| ||| ||    
T  2658840 gcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 2658939  T
Q  158 gcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctac 233  Q
    ||| |||| ||| |||||||||||||||| |||||||||||||||||| || || ||||| |  |||||||||||||    
T  2658940 gcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctac 2659016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 49064265 - 49064173
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcat 150  Q
    ||||||||| ||||||| ||||||||||||| |||| |||  |||||||| ||| |||||| |||||||||||||| |||  |||||||||||    
T  49064265 gcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactatcat 49064173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 787329 - 787242
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactat 147  Q
    ||||||||||||||||| |||  |||||||||| ||||  ||||||||  | |||||||||||||||||||||| || ||||||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 787242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 5746185 - 5746026
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--tttt 155  Q
    ||||||||||||||||||||||  ||||||||| | ||||  ||| || |  |||||||||||||||||||||||  |||| |||||||| |||  ||||    
T  5746185 gcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactat-atgtttttt 5746088  T
Q  156 ttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||| |||||||| || || ||||||| |||||||| ||||||| | || ||||| |||||    
T  5746087 ttgcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagtttta 5746026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 32004702 - 32004792
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| | |||||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  32004702 tatcatttttgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacc 32004792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 11973945 - 11973789
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||| ||||||||||  ||||||||||| |  |  ||| ||||| | |||||||||||| ||||||||| || |||||| ||  ||| |||||||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaatta-aatggtttttgc 11973847  T
Q  160 agttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||| ||| | |||||||| ||||| || ||||||| |||| ||||| |||||    
T  11973846 agttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 11973789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 26026861 - 26026705
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgc 159  Q
    ||||||||||||||||||||   |||||||| |  |||  ||||||||  |  || || ||||||||||||||   |||| ||||||| |||||||||||    
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactat-atgttttttgc 26026763  T
Q  160 agttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||  || |||| ||||| |||||||||||||||| |||| ||||| |||||    
T  26026762 agttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagtttta 26026705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 14311317 - 14311455
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-tttttt 157  Q
    |||||||| | ||||||| ||  |||||| |||| |||| |||| ||||||| |||||||||||| ||| ||||| || |||||||||| ||| ||||||    
T  14311317 cttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactat-atgttttttt 14311415  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaac 196  Q
     |||||||| ||||| || ||||||| |||||||| ||||    
T  14311416 acagttttaatcctatctccctatttccaactccataaac 14311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 38859098 - 38859011
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacct 231  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||| | ||||| |  |||||||||||    
T  38859098 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacct 38859011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 19830876 - 19830787
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||| ||||||| ||||| ||||| |  ||||||||||||||    
T  19830876 tatcatttttgttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacc 19830787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 27245748 - 27245603
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||| |||||||||| |  |||||||| || ||||  ||||||||  |  || |||||||||||||||||| |||| |||| ||| |||| |||||    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattat-atgtattttg 27245650  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaa 204  Q
    || |||||||| || || ||||||| |||||||| ||||||| ||||    
T  27245649 caattttagtcatatctccctatttccaactccagaaacgcacagaa 27245603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 29099938 - 29100028
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||| ||| ||||| ||| || ||||| ||||| | |||||||||||||||    
T  29099938 tatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacc 29100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 35288904 - 35289081
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||| ||  |||||| ||  ||||  ||| ||||  |||| |||||||| | ||||||||| |||||  || |||||| ||| |    
T  35288904 gcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  157 tgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| ||||||| || ||||||||| ||||| |||| ||||||| ||||| ||||| |  ||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacc 35289081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 11971335 - 11971433
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| ||||||||||||  ||||||||||  ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  11971335 gcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 11971433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 90; Significance: 1e-43; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 205911 - 205767
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    ||||||||||||||| |||||||||||||||||| ||||  ||||||||  ||||||||| |||||||||||||  |||| ||||||||||||||||| |    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttttt-g 205813  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaa 205767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 210882 - 210783
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||  ||||||||| |||||||||||||  || ||||||||||||| ||||||    
T  210882 gcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttttttt 210783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 205031 - 205097
Alignment:
Q  138 cctaaactatcatgttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  205031 cctaaactatcatgttttttgcagttttagtcctacctcctattttcaactctagaaacacagagaa 205097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 204931 - 205027
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttt 156  Q
    ||||||||||||||||||||   |||||||||||||||  |  |||||  | ||||||| ||||| ||||||||||| |||||||||||||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactatcatgttttt 205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 205361 - 205457
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttt 156  Q
    ||||||||||||||| ||||   |||||||||||||||  |  |||||  | ||||||| |||||||||||| |||| |||||||||||||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactatcatgttttt 205457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 205461 - 205511
Alignment:
Q  138 cctaaactatcatgttttttgcagttttagtcctacctcctattttcaactc 189  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  205461 cctaaactatcat-ttttttgtagttttagtccaacctcctattttcaactc 205511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 35163187 - 35163312
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgca 160  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||  || |||||| |||||||||||||  |||||||||||||||||||||||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcctaaactatcatgttttttgca 35163286  T
Q  161 gttttagtcctacctcctattttcaa 186  Q
    ||||||||||||||||||||||||||    
T  35163287 gttttagtcctacctcctattttcaa 35163312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 35163732 - 35163573
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||| | ||||||||||||||||  ||||||||| ||||||||| ||||| |||||||| |||| |||||||| |||||||||    
T  35163732 gcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactat-atgtttttt 35163634  T
Q  158 --gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  35163633 ttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagtttta 35163573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 835389 - 835535
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg 151  Q
    ||||| |||||||| ||||||||||||||||||||| | |||||||  ||||||||  ||||||||| ||||||||||||| ||| |||||||||||||     
T  835389 aattaggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactatcat- 835487  T
Q  152 ttttttgcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||    
T  835488 ttttttgcagctttagtcctaccccctattttcacctccaaaaacgca 835535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 31073687 - 31073529
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||||||||  ||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||| |    
T  31073687 gcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactat-atgttttgt 31073589  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  31073588 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 31073529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 32836010 - 32836178
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgca 160  Q
    ||||||||||||||| ||||  |||||||||||||||| ||||| |||  ||||||||| |||||||||||||  |||||||||||||||||||     |    
T  32836010 ttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgtcctaaactatcatgttt-----a 32836104  T
Q  161 gttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||||| |||||||||||||||||||||  |||| ||||||| ||||| |||||   | |||||||||||||    
T  32836105 gttttagttctacctcctattttcaactcctgaaacacagagaaatgacagttttagacaattttagacctacc 32836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 33095716 - 33095856
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    ||||||| |||||||||||||| |||||| | ||||||   ||||||||    ||||||| |||||||||||||  |||| |||||||||||||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttg 33095815  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  33095816 cagttttagtcctacctcctattttcacctccaaaaacgca 33095856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 31574270 - 31574112
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| | || || |||||||||||||||||||||| || |||||||||| |||||||||    
T  31574270 gcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 31574172  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || |||||||||||||||| ||||||| | || |||||||||||    
T  31574171 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaatttta 31574112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 32836541 - 32836396
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgtttttt 157  Q
    |||||||||||||||| |||||  ||||||||||||||||  |||||||| |||||||||| |||||||||||||  | || |||||| | |||||||||    
T  32836541 gcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atgtttttt 32836443  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||||||||||||||| |||||||||||| || ||||| ||||||    
T  32836442 gcagttttagtcctaccttctattttcaacttcagaaacgaagagaa 32836396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 11523686 - 11523827
Alignment:
Q  61 ttaattacacttttggtcctcacattttgacc-agctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttt-tt 157  Q
    |||||||||||||||||||| | ||||| | | | |||| |||||||||||||| ||||| ||||| |||||||  |||| |||||||||||||||| ||    
T  11523686 ttaattacacttttggtccttatatttttaactacctcataaaaatggttatgcttctttcaaatcaaacaaaaccgtccctaaactatcatgttttttt 11523785  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  11523786 gcagttttagtcctacctcatattttcaactccataaacgca 11523827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 33096156 - 33096011
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaat----tgtcct-aaactatcatgtt 153  Q
    |||||||| |||||||| || || |||||| |||||||||  |||||||| ||| |||||| |||||||||||||     |||||| |||||||||||||    
T  33096156 gcttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaaccaactgtccttaaactatcatgtt 33096057  T
Q  154 ttttgcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  33096056 ttttgcaattttagtcctaccccctattttcacctccaaaaacgca 33096011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 5121014 - 5120856
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| |  |  | |||||||||||||||||||||| |||| |||||||| |||||||||    
T  5121014 gcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 5120916  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  5120915 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtttta 5120856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 25468852 - 25469010
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttt--tt 157  Q
    |||||||||||||||||||| |||||||||||| ||||  ||| |||| ||  ||||||||||||||||||||| || |||||||||| |||||||  ||    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttctt 25468950  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||| || |||| ||||||| |||| ||||| |||||    
T  25468951 gcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagtttta 25469010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 25472558 - 25472399
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  25472558 gcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 25472460  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| || ||||| ||||||| |||| ||||| |||||    
T  25472459 tgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagtttta 25472399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 5114469 - 5114627
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||| ||||| ||||  |||||||| || ||||  ||||||||  |  || |||||||||||||||||| ||||| ||||||| |||||||||    
T  5114469 gcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 5114567  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| |||| || |||| ||||| |||||    
T  5114568 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 5114627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 210
Target Start/End: Complemental strand, 24640728 - 24640578
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgc 159  Q
    ||||||| ||||||||||||  |||||||| || ||||  ||||||||  |  || |||||||||||||||||| ||||| ||||||| |||||||||||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 24640630  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgaca 210  Q
    |||||||||| || || ||||||| ||||||| |||||||| |||| |||||    
T  24640629 agttttagtcttatctccctatttccaactccgaaaacgcacagaaatgaca 24640578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 20741551 - 20741468
Alignment:
Q  152 ttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||||||||| |  ||||||||||||||    
T  20741551 ttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacc 20741468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 22534164 - 22534211
Alignment:
Q  152 ttttttgcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22534164 ttttttgcagttttagtcctacctcctattttcaactccaaaaacgca 22534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 23075672 - 23075495
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| |||| ||||| |||||||| | ||||||||  |||||  || |||||| ||| |    
T  23075672 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 23075574  T
Q  157 tgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| || |||||||||||||| || ||||||||| |||||||| ||||| ||||| | |||||||||||||||    
T  23075573 tgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacc 23075495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 30251237 - 30251084
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgt-tttt 156  Q
    ||||||||||||||||| ||||   |||||||||| |||| |||||| || ||  || |||||||||||||||||| |||| ||||||||  ||| ||||    
T  30251237 gcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactat-ttgtatttt 30251139  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgaca 210  Q
    || |||||||||| || || ||||||| |||||||| ||||||| |||| |||||    
T  30251138 tgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgaca 30251084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 29891566 - 29891479
Alignment:
Q  118 tttaaatcgaacaaaattgtcct-aaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaa 204  Q
    ||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||||| || ||||||| |||||||| ||||||| ||||    
T  29891566 tttaaattgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaa 29891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 835770 - 835692
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt 137  Q
    |||||||| |||||||||||||| |||||| | ||||| |  ||||||||  ||||||||| |||||||||||||||||    
T  835770 gcttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaattgt 835692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 11445531 - 11445358
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    |||||||||||||||||||||||   ||||| ||  ||||  ||| ||||  ||||| ||| |||  ||||||||  |||||  || |||||| ||| ||    
T  11445531 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 11445432  T
Q  158 gcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacc 230  Q
    ||| |||| |||||||||||||||||| ||||| | |||||||||||| ||||| ||||| |  ||||||||||    
T  11445431 gcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacc 11445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 31242809 - 31242945
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    |||||||||||||||  |||| ||||||||||| ||||  |||||| |  ||||| |||||||||||||| || ||| || ||||||||||  |||||||    
T  31242809 ttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtccccaaactatcat-atttttgc 31242907  T
Q  160 agttttagtcctacctcctattttcaactccaaaaacg 197  Q
    |||||| ||| || ||||| |||||   ||||||||||    
T  31242908 agtttttgtcttaactccttttttctcttccaaaaacg 31242945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 10900027 - 10900099
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| |||||    
T  10900027 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 10900099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 12935245 - 12935317
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| |||||    
T  12935245 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagtttta 12935317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 10900474 - 10900316
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttt 156  Q
    |||||||||||||||||||||||  |||||| ||  ||||  ||| |||| ||||| |||||||| | ||||||||  |||||  || |||||| ||| |    
T  10900474 gcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  157 tgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| |||| |||||||| || |||||   |||||||||||||||||| ||||| |||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 10900316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 11276695 - 11276750
Alignment:
Q  162 ttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaatttta 216  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  11276695 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 11276750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 29891081 - 29891239
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||| |||| |||||||||| | || |  ||| || | || ||||||||||| |||||||||  || |||||||||| |||||||||    
T  29891081 gcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactat-atgtttttt 29891179  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     || ||||| | ||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  29891180 acaattttaattctatctccctatttccaactccagaaacgcacataaatgacagtttta 29891239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 22219810 - 22219720
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| || ||||||||||||||||| ||||| |||| ||||||| ||||| ||||| |  ||||||||||||||    
T  22219810 tatcatttttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacc 22219720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 28636293 - 28636425
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgtttttt 157  Q
    ||||||||||| |||||||| |   |||||||||| ||||  ||| ||||  | | |||||||||||||||||||| | ||||||||||| ||| |||||    
T  28636293 gcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactat-atg-ttttt 28636390  T
Q  158 gcagttttagtcctacct-cctattttcaactcca 191  Q
    |||||||||||| || || ||||||| ||||||||    
T  28636391 gcagttttagtcatatctccctatttccaactcca 28636425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 15827725 - 15827794
Alignment:
Q  142 aactatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgaca 210  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||||| || |||||    
T  15827725 aactatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca 15827794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 28636659 - 28636583
Alignment:
Q  140 taaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||| ||||||||||||||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  28636659 taaactat-atgttttttgcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagtttta 28636583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 31573819 - 31573884
Alignment:
Q  152 ttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  31573819 ttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtttta 31573884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 31470414 - 31470493
Alignment:
Q  156 ttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||| ||||||| |||||||||||| || || ||||| |   |||||||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacc 31470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 31470773 - 31470702
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| |||||||| || |||||   |||||||||||||||||| |||||||||||    
T  31470773 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaatttta 31470702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 4811713 - 4811624
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| ||||  || |||||||||||||||| | ||| ||||||||| || || |||||||| |||||||||||||||||    
T  4811713 tatcatttttgttgcatttttcatcatacctcctattttcaaaccccataaacgcagaaaa-tggcaattttaggtagttttagacctacc 4811624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 22534063 - 22534139
Alignment:
Q  56 tatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaa 133  Q
    |||| ||||||||||||||| ||| |  ||||||| ||| |||  |||||||| ||| ||||||||||||||||||||    
T  22534063 tatgattaattacacttttg-tccccgtattttgatcagttcaagaaaatggtcatgtctcttttaaatcgaacaaaa 22534139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 22534269 - 22534220
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggt 108  Q
    |||||||||||||||||||||||  |||||||||| ||||  ||||||||    
T  22534269 gcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggt 22534220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 17503975 - 17504132
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttg 158  Q
    ||||||||| ||| ||||||||| ||||||||||| ||||  ||||||||  ||||||||| |||| ||||| ||  |||||||||||||||||||||||    
T  17503975 gcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcctaaactatcatgttttttg 17504074  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||    
T  17504075 cagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagtttta 17504132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 229702 - 229546
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    |||||||||||||||||| || ||||||||||||||||  ||||||||  ||||||||| ||||| |||||||| |||| |||||||||||| |||||||    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg-tttttgc 229604  T
Q  160 agttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  229603 agttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaatttta 229546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 204
Target Start/End: Complemental strand, 40160633 - 40160490
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgca 160  Q
    ||||||||| ||||||||||  ||||||||||| ||||  ||||| || |||||||||| |||| ||||||||  |||||||||||||||||||||||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcctaaactatcatgttttttgca 40160534  T
Q  161 gttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||    
T  40160533 gttttagtcttacctcctattttcaactccagaaacgtagagaa 40160490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 23986517 - 23986635
Alignment:
Q  55 ttatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtt 153  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||| ||| |||||| ||||||||||||| ||| ||||||||||||||||    
T  23986517 ttatgcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgtt 23986616  T
Q  154 ttttgcagttttagtccta 172  Q
    |||||||||||||||||||    
T  23986617 ttttgcagttttagtccta 23986635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 35193852 - 35193702
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt 153  Q
    |||| ||||||||||||||||||||||  ||||||||  ||||||  ||||||||  ||||||||| ||||| |||||||  ||||||||||||||||||    
T  35193852 attaggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcctaaactatcatgtt 35193753  T
Q  154 ttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    |||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  35193752 ttttgatgttttagtcatacctcctattttcaactccagaaacgcagagaa 35193702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 24335757 - 24335920
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgt 152  Q
    |||| ||||||||||||||| | ||||  ||||||||||||||||  |||||||| |||||||||| |||||||||||||  ||  || |||||||||||    
T  24335757 attaggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtatctgaactatcatgt 24335856  T
Q  153 tttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||| | || ||||| |||||    
T  24335857 tttttggagttttagtcctacaccctattttcaactccaaaaacgcacataaatgacagtttta 24335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 35193322 - 35193466
Alignment:
Q  72 tttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcc 170  Q
    |||||||||| |||||||| |||||||  ||||||||  | ||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcc 35193420  T
Q  171 tacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    || ||||||||||||||| || |||||||||||| ||||| |||||    
T  35193421 tatctcctattttcaacttcagaaacgcagagaaatgacagtttta 35193466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 40160095 - 40160225
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||| ||||| ||| | |||||| |||||||||  ||||| || ||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  40160095 gcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactat-atgtttttt 40160193  T
Q  158 gcagttttagtcctacctcctattttcaactc 189  Q
    ||||||||||||||||||||||||||||||||    
T  40160194 gcagttttagtcctacctcctattttcaactc 40160225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 12593025 - 12593183
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  || |||||||| ||||  |||||||| || ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  12593025 gcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 12593123  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||| ||||| ||||| || |||||||||||||||| ||||||| |||| ||||| |||||    
T  12593124 gcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagtttta 12593183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 12593568 - 12593410
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| |||| || |||||||||||||||||||||| |||  |||||||| || ||||||    
T  12593568 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactat-atatttttt 12593470  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||||||||||| ||||||| || | ||||| |||||    
T  12593469 gcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagtttta 12593410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 34789927 - 34789769
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-tttttt 157  Q
    |||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat-atgttttttt 34789829  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||||||||||| | || ||||| |||||    
T  34789828 gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagtttta 34789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 24336307 - 24336169
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgttttttg 158  Q
    |||||||||||||||| ||||| ||||||||| ||||||  ||||||||  ||||||||| |||||||||||||  | ||||||| ||||||||||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  159 cagttttagtcctacctcctattttcaactccaaaaacg 197  Q
    |  ||||||||||||| | |||||||||||||| |||||    
T  24336207 ctcttttagtcctaccccatattttcaactccagaaacg 24336169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 51310050 - 51309912
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||||||| |||||||||||||| |||||| |||||||||  |||||||| |||||||||| |||||||||||||  || ||||||||||||||||||||    
T  51310050 gcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgtttttt 51309951  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaac 196  Q
     | ||||||||| || |  ||||||||| ||||||||||    
T  51309950 acggttttagtcatagcctctattttcacctccaaaaac 51309912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 229164 - 229320
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    |||||||||||||||||||||  ||||||||||||||   ||||||||  ||||||||| |||| ||||||||| |||| |||||||||||| |||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatg-tttttgc 229262  T
Q  160 agttttagtcctac-ctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||| |||| | | |||||||||||||| ||||||| | |||||||| |||||    
T  229263 agttttagttctactcccttattttcaactccataaacgcacaaaagtgacagtttta 229320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 34789383 - 34789541
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  34789383 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 34789481  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||  ||||||| ||||||| | || |||||||||||    
T  34789482 gcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaatttta 34789541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 46737200 - 46737042
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| |||||||||    
T  46737200 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 46737102  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || | |||||| | |||||||| ||||||| |||| ||||| |||||    
T  46737101 gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagtttta 46737042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 54441113 - 54440973
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||||||||||||||||  |||||||| |||||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| ||||||||||    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 54441015  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    |||||||||||||| || ||||||| |||||||| |||||||    
T  54441014 cagttttagtcctatctccctatttccaactccagaaacgca 54440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 54440573 - 54440728
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttg 158  Q
    |||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || ||||||||   ||||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact---atgttttttg 54440669  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||| || ||||||||||||| || ||| ||| |||| ||||| |||||    
T  54440670 cagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagtttta 54440728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 28465626 - 28465485
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  28465626 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 28465528  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||| ||||||||||| || ||||||| |||||||| |||||||    
T  28465527 gcaattttagtcctatctccctatttccaactccataaacgca 28465485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 33689830 - 33689970
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| |||| |||| ||||  | |||||||||||||||||||||| |||| |||||||| ||| |||||    
T  33689830 gcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactat-atg-ttttt 33689927  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    |||||||||||| || || ||||||| |||||||| |||||||    
T  33689928 gcagttttagtcatatctccctatttacaactccagaaacgca 33689970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 14439831 - 14439987
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||| ||||||||||  ||||||||||| ||||  ||| |||| || ||| ||||||||  |||||||| || |||||||||| |||||||||||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactat-atgttttttgc 14439929  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  14439930 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 14439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 41608377 - 41608534
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatg---tttttt 157  Q
    ||||||||||||||||||||  |||||||| || ||||  ||| |||| || |||||||||||||||||||||| |||| ||||||| |||   ||||||    
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc-aaactat-atgttttttttt 41608474  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| |||| ||||| ||||| |||||||||| |||| ||||| |||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagtttta 41608534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 34807117 - 34807276
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  |||||||| || ||||  ||| |||| || |||||||||||||||||||||| || |||||| ||| ||| |||||    
T  34807117 gcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtat-atgtttttt 34807215  T
Q  157 tgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| |||| ||||| |||||||| ||||||| | || ||||| |||||    
T  34807216 tgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagtttta 34807276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 18965141 - 18965299
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||| ||||| |||||||||||| ||   ||||  |||| |||  ||||||||| |||||||||||||| |||| |||||||||||| |||||    
T  18965141 gcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg-ttttt 18965239  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| |||||||| |||||||||||| | ||||||| | || ||||| |||||    
T  18965240 gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagtttta 18965299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 56077869 - 56077711
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||| ||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  56077869 gcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 56077771  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||| | ||||||| | || ||||| |||||    
T  56077770 gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagtttta 56077711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 28465083 - 28465240
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    ||||||||||||||| |||||  ||||||||||| || |  ||| || |  | |||||||||||||||||||||| |||| |||||||| ||||||||||    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 28465181  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||| || || |||||||||||||||| ||||||| | || ||||| |||||    
T  28465182 cagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagtttta 28465240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 28166007 - 28166151
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||| | ||||||||||   |||||||||| ||||  ||||||||  |  || ||||||||||||||||||||||| |||||||| || ||||||||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-attttttttgc 28166105  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||||    
T  28166106 agttttagtcctatctccctattttcaactacaaaaacgcacagaa 28166151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 19528870 - 19529029
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  |||||||||||  |||  ||| ||||  | |||||||||||||||| ||||| || |||||||||| ||| |||||    
T  19528870 gcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactat-atgtttttt 19528968  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||  ||||||| |||| ||||| |||||    
T  19528969 tgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagtttta 19529029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 26974284 - 26974443
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  |||||| || | ||||  |||||||| ||  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  26974284 gcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 26974382  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | |||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  26974383 tacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 26974443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 17504480 - 17504346
Alignment:
Q  83 cattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgcagttttagtcctacctccta-t 180  Q
    |||||||| |||||||  ||||||||  |  ||||||||||||||||||||  ||||| ||||||| |||||||||||| ||||||| |||||||||| |    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctatt 17504382  T
Q  181 tttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||| | |||||||||||| ||||| |||||    
T  17504381 tttcaactctagaaacgcagagaaatgacagtttta 17504346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 45838548 - 45838694
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||| ||||||||||||||||   |||||||||| ||||   || ||||  | |||||||||||||||||||||| |||| |||||||| |||||||||    
T  45838548 gcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 45838646  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||||||||| || ||||||| | ||| |||||||||| ||||    
T  45838647 gcagttttagtcctatctccctatttcctacttcaaaaacgcacagaa 45838694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 46736656 - 46736814
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||| ||||||||| ||   |||||||||| ||||  ||||||||  |   | |||||||||||||||||||||||| ||||||| |||||||||    
T  46736656 gcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactat-atgtttttt 46736754  T
Q  158 gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| |||| ||||| |||| |||||||||||||| ||||||| |||| ||||| |||||    
T  46736755 gcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagtttta 46736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 25447335 - 25447425
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||||||||| | |||||||||||||||    
T  25447335 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacc 25447425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 21034236 - 21034395
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||    
T  21034236 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 21034334  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | ||||||||||| || || ||||||| |||||||| ||||||| | || ||||| |||||    
T  21034335 tacagttttagtcatatctccctatttccaactccataaacgcacataaatgacagtttta 21034395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 55677503 - 55677344
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-ttttt 156  Q
    ||||||||||||||||||||||   |||||||||| ||||  ||| ||||  | |||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  55677503 gcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgtttttt 55677405  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | || ||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  55677404 tacaattttagtcctatctccctatttccaactccataaacgcacataaatgacagtttta 55677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 14440373 - 14440215
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| ||||||||||||  ||||||||||| || |  ||||||||  |  || ||||||||||||||||||  ||| |||||||| |||||||||    
T  14440373 gcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactat-atgtttttt 14440275  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||| | ||||||| |||| ||||| |||||    
T  14440274 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtttta 14440215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 24852010 - 24851864
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-tttttt 157  Q
    |||||||| ||||||||||||  ||||||||||| ||||  ||| || |  | |||||||||||||||||||||| || |||||||||| ||| ||||||    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttt 24851912  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaa 204  Q
    ||||||||||||||| | | |||||| |||||||| ||||||| ||||    
T  24851911 gcagttttagtcctatctttctatttccaactccagaaacgcacagaa 24851864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 12930800 - 12930944
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgtt 153  Q
    |||| |||||||| |||||||||||| |||||||| |||| ||||  ||| |||   || || ||| |||||||||||||  |||||| | |||||||||    
T  12930800 attaggcttaattgcacttttggtccgcacattttaaccaactcacgaaattggcattgtctttttcaaatcgaacaaaacagtcctatattatcatgtt 12930899  T
Q  154 tt-ttgcagttttagtcctacctcctattttcaactccaaaaacg 197  Q
    || |||||||||||||| || || ||||||||  |||||||||||    
T  12930900 tttttgcagttttagtcttaactgctattttcccctccaaaaacg 12930944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 19529239 - 19529080
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg-ttttt 156  Q
    ||||||||||||||||| ||||  ||||||||||| || | ||||||| || |  ||||||||||| ||||||||| |||  |||||||| ||| |||||    
T  19529239 gcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactat-atgtttttt 19529141  T
Q  157 tgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| ||| |||| ||||| |||||  ||||||||| |||| ||||| |||||    
T  19529140 tgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagtttta 19529080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 21034782 - 21034643
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||| ||||||||||  ||||||||||| ||||  ||| ||||  |  ||||||||||||||||||||| || ||| ||||||  | ||||||    
T  21034782 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatattttttttt 21034683  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaac 196  Q
    ||||||||||| ||| || ||||||| |||||||| ||||    
T  21034682 gcagttttagttctatctccctatttccaactccagaaac 21034643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 45839092 - 45838934
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt-- 157  Q
    ||||||||||||||||||||   |||||||||| ||||  ||| ||||  |  || |||||||||||||||||| ||||| ||||||| |||||||||      
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttt 45838995  T
Q  158 -gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
     ||||||||||||||| | |||||||| |||||||| ||||||| |||| ||||| |||||    
T  45838994 tgcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagtttta 45838934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 11153147 - 11153324
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgtttttt 157  Q
    ||||||||| |||||||||||||   ||||| ||  |||| |||| |||| |||||  ||| |||| ||| ||||  |||||  || |||||| ||| ||    
T  11153147 gcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtt 11153246  T
Q  158 gcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  11153247 gcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacc 11153324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 33778156 - 33778024
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattg-tcctaaactatcatgttttttg 158  Q
    ||||||||||||||| || ||  ||||||||| | ||||  |||||| || | ||||||||||||| |||||||| | ||||||| ||| ||||||||||    
T  33778156 cttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattat-atgttttttg 33778058  T
Q  159 cagttttagtcctacct-cctattttcaactcca 191  Q
    |||||||||| ||| || ||||||| ||||||||    
T  33778057 cagttttagttctatctccctatttccaactcca 33778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 34807626 - 34807526
Alignment:
Q  117 ttttaaatcgaacaaaattgtcct-aaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaattt 214  Q
    |||||| ||||||||||| ||||| ||||||| |||||||| ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||    
T  34807626 ttttaattcgaacaaaatcgtccttaaactat-atgtttttggcagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttt 34807528  T
Q  215 ta 216  Q
    ||    
T  34807527 ta 34807526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 41114160 - 41114318
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg--tttttt 157  Q
    ||||| ||||||||||||||  ||||||||||| ||||  |||| |||  |  || |||||||||||||||||  |||| |||||||| |||  ||||||    
T  41114160 ttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactat-atgtttttttt 41114258  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||| | ||||||| |||| |||||||||||    
T  41114259 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaatttta 41114318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 15523330 - 15523413
Alignment:
Q  152 ttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||||||| |||| |||||||||||||||||| ||||| | |||||||||||| ||||| ||||| |  ||||||||||||||    
T  15523330 ttttttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacc 15523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 18965645 - 18965523
Alignment:
Q  95 ctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgcagttttagtcctac-ctcctattttcaactccaa 192  Q
    |||| ||||||||| |||||| |||| | | ||||||||| || ||||||||||||||||||| | |||||||||| ||| | ||||||||||||||||     
T  18965645 ctcacaaaaatggtcatgccttttttgatttgaacaaaatcgttcctaaactatcatgttttt-gtagttttagtcatactcccctattttcaactccat 18965547  T
Q  193 aaacgcagagaagtgacaatttta 216  Q
    ||||||| | || ||||| |||||    
T  18965546 aaacgcacataaatgacagtttta 18965523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 51021242 - 51021163
Alignment:
Q  156 ttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||||| ||||| |||||||||||| || |||||||| |  ||||||||||||||    
T  51021242 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacc 51021163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 6616675 - 6616832
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttttg 158  Q
    ||||||||||||||||| ||  |||||||| || ||||  ||||||||  |   | |||||||||||||||||| |||| |||||||| ||| |||||||    
T  6616675 ttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 6616773  T
Q  159 cagttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | || ||||||||||||| |||||| |||||||| ||||||| | || ||||| |||||    
T  6616774 ctgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagtttta 6616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 12234786 - 12234696
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||| ||| ||| |||||||| ||||| ||||| | |||||||||||||||    
T  12234786 tatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacc 12234696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 12503504 - 12503614
Alignment:
Q  126 gaacaaaattgtccta-aactatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagtt 223  Q
    |||||||||||||||  || |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| | ||| ||||| |   ||    
T  12503504 gaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattacagttttaggcgatt 12503603  T
Q  224 ttagacctacc 234  Q
    |||||||||||    
T  12503604 ttagacctacc 12503614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 20470968 - 20470878
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||| | ||||| |  ||||||||||||||    
T  20470968 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacc 20470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 22434267 - 22434357
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||| | |||| |||||||||||||||||||| ||||| |||||||||||| ||||| ||||| |  ||||||||||||||    
T  22434267 tatcatttttgttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 22434357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 45082881 - 45082791
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| | |||||||||||| ||||| ||||| |  ||||||||||||||    
T  45082881 tatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacc 45082791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 41608966 - 41608885
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaat 134  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | ||||||||||||| ||||||||    
T  41608966 aattaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaat 41608885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 30598064 - 30597925
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    |||| ||||||||||||||||||   ||||||||| ||||   || ||||| || ||||||||||||||||||||| || |||||| ||| || ||| ||    
T  30598064 gcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattat-atttttgtt 30597966  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgc 198  Q
    ||| |||| |||||| | |||||||| |  |||||||||||    
T  30597965 gcacttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 33777635 - 33777766
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgc 159  Q
    ||||||||||||||| ||||  ||||||||||| ||||  |||||| | ||   | ||| |||||||||||||| |||| |||||||| |||||||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactat-atgttttttgc 33777733  T
Q  160 agttttagtcctacctc-ctattttcaactcca 191  Q
    | ||||| ||||| ||| | |||||||||||||    
T  33777734 aattttaatcctatctctccattttcaactcca 33777766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 46193493 - 46193565
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| |||||    
T  46193493 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 46193565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 48526627 - 48526548
Alignment:
Q  156 ttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    ||||| |||| |||||||||||||||||| ||||||| |||| ||||||| ||||| ||||| |  ||||||||||||||    
T  48526627 ttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacc 48526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 4220016 - 4219930
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacc 230  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||| ||||||||||||||| | ||| ||||| |  ||||||||||    
T  4220016 tatcatttttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacc 4219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 26974736 - 26974679
Alignment:
Q  113 cctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttttgcagttttagtc 169  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  26974736 cctcttttaaatcgaacaaaattgtccctaaactat-atgtttttttgcagttttagtc 26974679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 36168876 - 36168743
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||| ||||||||  ||||||||||| ||||  |||||| |  |   | |||||||| |||||||||| | || ||| ||| |||||||||    
T  36168876 gcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattat-atgtttttt 36168778  T
Q  158 gcagttttagtcctacct-cctattttcaactcca 191  Q
    || |||||||||||| || ||||||||||||||||    
T  36168777 gcggttttagtcctatctccctattttcaactcca 36168743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 54995157 - 54995247
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||| | |||||| ||||| ||||| |  ||||||||||||||    
T  54995157 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacc 54995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 6617153 - 6617089
Alignment:
Q  113 cctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacctcc 177  Q
    |||||||||||||||| ||||| |||| |||||||| || ||||||||||||||||||||| ||||    
T  6617153 cctcttttaaatcgaataaaatcgtccctaaactat-attttttttgcagttttagtcctatctcc 6617089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 35643661 - 35643726
Alignment:
Q  152 ttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  35643661 ttttttgcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagtttta 35643726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 36168332 - 36168474
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg---ttttt 156  Q
    ||||||||||||||| ||||  ||||||||||| | ||  ||| ||||  | |||||||||||||||||||||| |||| |||| ||| |||   |||||    
T  36168332 ttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattat-atgtttttttt 36168430  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    ||||||||||||| || || |||||||  ||||||| |||||||    
T  36168431 tgcagttttagtcttatctccctatttctaactccagaaacgca 36168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 1397597 - 1397677
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct 140  Q
    |||||||||||||||| |||   ||||||||||| |||| |||||||||  |  || |||||||||||||||||| |||||    
T  1397597 cttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 1397677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 18751602 - 18751777
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatc-gaacaaaattgtccta-aactatcatgttttttg 158  Q
    |||||||||||||||||||||   ||||| ||  |||| |||| |||| ||||| |||||||| | ||||||||  |||||  || |||||| ||| |||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcc-cttttaaaacagaacaaaacggtccttcaaatatcatttttgttg 18751700  T
Q  159 cagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    || |||| |||| ||||||||||||| ||||||| ||||||||| || || || ||||| |  ||||||||| ||||    
T  18751701 catttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacc 18751777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 51309668 - 51309767
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||  |||||||||||||  ||||| |  ||||||  |||||| | |||| ||||| ||||||||||||| ||| |||||| |||||||||||||    
T  51309668 gcttaattgtacttttggtcctcgtatttttattagctcacgaaaatgatcatgcgtctttcaaatcgaacaaaactgtccctaaattatcatgtttttt 51309767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 25938128 - 25938038
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||| || |||| || || ||||| |  ||||||||||||||    
T  25938128 tatcatttttgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacc 25938038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 2118381 - 2118470
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctac 233  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||| || |||||||||||| |  || ||||| |  |||||||||||||    
T  2118381 tatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctac 2118470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 16215038 - 16214902
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgttttttgc 159  Q
    ||||||| ||||||||||||  |||||||| || || |  |||||| | ||  || |||||||| ||| ||||| ||||| ||||||| || ||||||||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactat-atattttttgc 16214940  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaac 196  Q
    ||||||| | ||| || |||||||||||||||| ||||    
T  16214939 agttttaattctatcttcctattttcaactccagaaac 16214902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 24851317 - 24851398
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct 140  Q
    ||||||||||||||||| ||||  ||||||||||| ||||  ||||||||  |  || |||||||| ||||||||| |||||    
T  24851317 gcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtcct 24851398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaat 124  Q
    |||||||||||||||||||||  ||||||||||| ||||  |||  ||| || ||||||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 28877432 - 28877277
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcctaaactatcatgttttttgca 160  Q
    ||||||||||||||||||||| ||||||||||| ||||  ||||||||||| ||||||| |||| ||||||||||||||  ||||||||||||||||||     
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccctaactatcatgttttttgct 28877333  T
Q  161 gttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| ||||||| ||||||| ||||| | | || |||||||||||    
T  28877332 gttttagtcctaccttctatttttaactccagaaacgtatataaatgacaatttta 28877277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 35427362 - 35427199
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgt 152  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||  ||||||||| | ||||||||||| |||||||||| || |||||| ||| || |    
T  35427362 attaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atat 35427264  T
Q  153 tttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||| | || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  35427263 tttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagtttta 35427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 42035772 - 42035931
Alignment:
Q  58 tgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttt 156  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||| | |||||||||||||||||||||| |||| |||||||| || | |||    
T  42035772 tgcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atatattt 42035870  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||| ||||||||||| || |||||||  ||||||| ||||||| | || ||||| |||||    
T  42035871 tgcaattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagtttta 42035931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 7911161 - 7911003
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||  ||||| ||||||||||| ||||  ||||||||| | |||||||||||||||||||||| || |||||||||| || ||||||    
T  7911161 gcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactat-atatttttt 7911063  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || ||  ||||||||||||||| ||||||| |||| ||||| |||||    
T  7911062 gcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagtttta 7911003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 9796727 - 9796885
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| |||| |||| ||||  | ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  9796727 gcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactat-atgtttttt 9796825  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  9796826 gcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagtttta 9796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 18805160 - 18805321
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtccta-aactatcatgt 152  Q
    |||||| |||||||||||||||||||   ||||||||| ||||||  ||||||||| | | ||||||||||||||||||| ||||| | |||||| ||||    
T  18805160 attatgtttaattacacttttggtccctgcattttgacaagctcacgaaaatggttcttc-tcttttaaatcgaacaaaactgtcccagaactat-atgt 18805257  T
Q  153 tttttgcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||| | |||||||||||||||||||| |||||||||| |||| ||||||| ||||| |||||    
T  18805258 tttttcctgttttagtcctacctcctatcttcaactccagaaacacagagaaatgacagtttta 18805321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 28254974 - 28254813
Alignment:
Q  56 tatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttt 154  Q
    |||||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| ||  ||    
T  28254974 tatgcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-ataatt 28254876  T
Q  155 tttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  28254875 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28254813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 15255848 - 15255987
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg 151  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||||||| |||    
T  15255848 aattaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atg 15255946  T
Q  152 ttttttgcagttttagtcctacct-cctattttcaactcca 191  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  15255947 ttttttgcagttttagtcctatctccctatttccaactcca 15255987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 217
Target Start/End: Complemental strand, 18050134 - 18049977
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgc 159  Q
    ||||||||| ||||||||||  ||||||||||| ||||  ||| |||| || |||||||||||||||||||||| || |||||||||| |||||||||||    
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 18050036  T
Q  160 agttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaattttac 217  Q
     |||||| ||||| || |||||||||||||||| ||||||| |||| | ||| ||||||    
T  18050035 tgttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttac 18049977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 34799628 - 34799487
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  |||||||||||  | |  ||| ||||  | ||||||||||||||||||||||||| |||||||||| |||||||||    
T  34799628 gcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat-atgtttttt 34799530  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgca 199  Q
    ||||||||||||||| | |||||||| |||||||| |||||||    
T  34799529 gcagttttagtcctatcttcctatttccaactccataaacgca 34799487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 18049595 - 18049750
Alignment:
Q  63 aattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttttgca 160  Q
    ||||||||||||||||||  ||||||||||| ||||  ||||||||| |  || |||||||||||||||||| |||| |||||||| ||| |||||||||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgca 18049693  T
Q  161 gttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  18049694 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 41260806 - 41260648
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||| |||||||||| |  |||||||| || ||||  ||| || | || |||||||||||||||||||||| || |||||||||| |||||||||    
T  41260806 gcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 41260708  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || |||||||||||||||| ||||||| | || ||||| |||||    
T  41260707 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtttta 41260648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 7910617 - 7910722
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||| |||||||||||||||||||| || ||||  ||||||||||| |||||||||||||||||||||| || |||||| ||| |||||||||    
T  7910617 gcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattat-atgtttttt 7910715  T
Q  158 gcagttt 164  Q
    |||||||    
T  7910716 gcagttt 7910722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 599533 - 599691
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||| ||||||||||  ||||||||||| ||||  ||| |||| || ||||||||||||||||||||||  | |||||| ||| |||||||||    
T  599533 gcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattat-atgtttttt 599631  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || || ||||||| |||||||| ||||||| | || ||||| |||||    
T  599632 gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagtttta 599691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 600043 - 599885
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| || |  |||||||| ||  || |||||||| ||||||||| |||| |||||||| |||||||||    
T  600043 gcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactat-atgtttttt 599945  T
Q  158 gcagttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||| || ||| |||||| ||| |||| ||||||| |||| ||||| |||||    
T  599944 gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagtttta 599885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 5730818 - 5730976
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||| ||  |  || ||||||||| |||||||| |||| |||||||| |||||||||    
T  5730818 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactat-atgtttttt 5730916  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    || ||||||||||||||| |||||||| ||||||| ||||| | |||| ||||| |||||    
T  5730917 gctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagtttta 5730976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 5731356 - 5731199
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||| |||||| ||| |  ||||||||||| ||||| ||| ||||| | ||| || ||||||||||||||| |||| |||||||| ||||||||||    
T  5731356 cttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactat-atgttttttg 5731258  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| ||| || |||||||||||||||| ||||||| | || ||||| |||||    
T  5731257 cagttttagttctatctccctattttcaactccagaaacgcacataaatgacagtttta 5731199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 16578647 - 16578483
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg 151  Q
    ||||| ||||||||||||||||||||||  ||||||||| | ||||  |||||||||||  || ||| ||||||||||||||  ||  |||||||| |||    
T  16578647 aattaggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactat-atg 16578549  T
Q  152 ttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||||||||| || ||||||| |||| | | ||||||| |||| ||||| |||||    
T  16578548 ttttttgcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagtttta 16578483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 28876910 - 28877050
Alignment:
Q  65 ttacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgcagtt 163  Q
    ||||||||||||||||| |||||||| |||||||  |||||  || ||||||||| |||||||||||||| || |||||||||||||| |||||| ||||    
T  28876910 ttacacttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg-tttttgtagtt 28877008  T
Q  164 tt-agtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    || | || ||| || |||||||||||| | ||||||||||||    
T  28877009 ttaaatcttacttcttattttcaactcaagaaacgcagagaa 28877050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 15256376 - 15256215
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg---ttt 154  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||   |||    
T  15256376 gcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 15256278  T
Q  155 tttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||| ||||| || || ||||||| |||||||| ||||||| |||| |||||||||||    
T  15256277 tttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaatttta 15256215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 41260272 - 41260403
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| |||||||||    
T  41260272 gcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 41260370  T
Q  158 gcagttttagtcctacct-cctattttcaactc 189  Q
    |||||||||||| || || ||||||| ||||||    
T  41260371 gcagttttagtcttatctccctatttccaactc 41260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 28254427 - 28254585
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-tttttt 157  Q
    |||||||||||||||||||||  |||||||| || ||||  ||||||||  |  || |||||||| ||||||||| |||| |||||||| ||| ||||||    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactat-atgttttttt 28254525  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  28254526 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacattttta 28254585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 9797270 - 9797113
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttttg 158  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||| |  || ||||||||| || ||||| |||| |||||||| ||| |||||||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactat-atgtttttttg 9797172  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| ||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  9797171 cagttttagttctatctacctatttccaactccataaacgcacagaaatgacagtttta 9797113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 16578109 - 16578250
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||| ||||||| ||  ||||||||||| ||||  ||| ||||  | |||||||||||||||||||||| || |||||| ||| |||||||||    
T  16578109 gcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgtttttt 16578207  T
Q  158 gcagttttagtcctacct-cctattttcaactccaaaaacgca 199  Q
    |||||||| |||||| || ||||||| |||||||| |||||||    
T  16578208 gcagttttggtcctatctccctatttccaactccagaaacgca 16578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 18428305 - 18428148
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatg-ttttttg 158  Q
    ||||||||||||||||||||  ||||||||||| ||||  ||||||||  |  || |||||||||||||||||| |||| |||||||| ||| |||||||    
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 18428207  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||| ||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  18428206 cagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 18428148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 34799080 - 34799239
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttt-t 156  Q
    |||||||||||||||||||| |  ||||||||||| ||||  ||||||||  |   | |||||||||||||||| | ||||| ||||||| ||||||| |    
T  34799080 gcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactat-atgtttttt 34799178  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||| || ||||||| |||||||| ||||||| | || |||||||||||    
T  34799179 tgcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaatttta 34799239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 6115656 - 6115497
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||| ||||||||||||   |||||||||| |||   ||| ||||  | |||||||||||||||||||||| || |||||||||| ||| |||||    
T  6115656 gcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 6115558  T
Q  157 tgcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    || ||||||||| ||| |||| |||||||||||| | ||||||| |||| ||||| |||||    
T  6115557 tgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagtttta 6115497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 35693869 - 35694029
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactat-catgttttt 156  Q
    ||||||||||||||||| ||||  |||||||||||  | |  |||||| || | |||||||||||||||| ||||| |||| ||||||||  || |||||    
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttt 35693968  T
Q  157 tgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    | |||||||||||||| || ||||||| |||||||| ||||||| | || ||||| |||||    
T  35693969 ttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 35694029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 19176378 - 19176468
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||| ||||||||||||||| ||||| |||||||||||| ||||||||||| |  ||||||||||||||    
T  19176378 tatcatttttgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacc 19176468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 26252865 - 26252950
Alignment:
Q  114 ctcttttaaatcgaacaaaattgt-cctaaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgc 198  Q
    ||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||||| || ||||||| |||||||| ||||||    
T  26252865 ctcttttaaatcgaacaaaatcgtccctaaactat-atgttttgtgcagttttagtcctatctccctatttccaactccagaaacgc 26252950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 18674149 - 18674256
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt 157  Q
    ||||||||||||| ||||||||  || ||||||||  |||  ||| ||||| | || ||||||||||||||||||| || |||||||||| |||||||||    
T  18674149 gcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 18674247  T
Q  158 gcagtttta 166  Q
    |||||||||    
T  18674248 gcagtttta 18674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 13225096 - 13225006
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| || || ||||| |  ||||||||||||||    
T  13225096 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacc 13225006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 33743021 - 33743099
Alignment:
Q  157 tgcagttttagtcctacctcctattttca-actccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||| |||| ||||||||||||||||||| || ||| |||||||||||| ||||| ||||| | |||||||||||||||    
T  33743021 tgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacc 33743099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 35694421 - 35694342
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct 140  Q
    ||||||||||||||||||||  ||||||||| | |||| |||||||||  | | | |||||||||||||||||| |||||    
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtcct 35694342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 44831335 - 44831422
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacct 231  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||| | ||||| |  |||||||||||    
T  44831335 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacct 44831422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 9928997 - 9929087
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||| ||||| ||||||| |||||||||||| || || ||||| |  ||||||||||||||    
T  9928997 tatcatttttgttgcatttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacc 9929087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 9930201 - 9930055
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    |||||||||||||||||||||||  |||||| ||  ||||  ||| ||||  ||||  ||| |||| ||||||||| |||| | ||||||||| ||| ||    
T  9930201 gcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgtt 9930102  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaa 204  Q
    ||| |||| |||||||| || |||||   |||||||| |||||||||    
T  9930101 gcatttttcgtcctaccccccattttattctccaaaagcgcagagaa 9930055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 10047125 - 10047068
Alignment:
Q  115 tcttttaaatcgaacaaaattgtc-ctaaactatcatgttttttgcagttttagtccta 172  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  10047125 tcttttaaatcgaacaaaatggtctctaaactatcatg-tttttgcagttttaatccta 10047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 11656914 - 11656854
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaa 204  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||||||||    
T  11656914 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaa 11656854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 12572308 - 12572248
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaa 204  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||||||||    
T  12572308 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaa 12572248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 42036317 - 42036206
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    ||||||||| ||||||  || || ||||||||||| || |  |||||| |  | |||||||||||||||||||||| || |||||||||| ||| |||||    
T  42036317 gcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 42036219  T
Q  157 tgcagttttagtc 169  Q
    |||||||||||||    
T  42036218 tgcagttttagtc 42036206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 2208716 - 2208855
Alignment:
Q  60 cttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttg 158  Q
    |||||||||||||||| ||||  ||||||||||| ||||  ||||| ||  |  || |||||||||||||||||| |||| ||||||||    ||||||     
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttta 2208815  T
Q  159 cagttttagtcctacct-cctattttcaactccaaaaacg 197  Q
    || |||||||| || || ||||||||||| |||| |||||    
T  2208816 caattttagtcatatctccctattttcaattccagaaacg 2208855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 41681591 - 41681501
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| ||||||||| |||||||||| ||||| |||||||||||| ||  | ||||| |  ||||||||||||||    
T  41681591 tatcatttttgttgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacc 41681501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 35426896 - 35426972
Alignment:
Q  140 taaactatcatgttttttgcagttttagtcctacct-cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||| |||||||||||| ||||| ||||| || ||||||| |||||||| ||||||| |||| ||||| |||||    
T  35426896 taaactat-atgttttttgcaattttactcctatctccctatttccaactccataaacgcacagaaatgacagtttta 35426972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 15643 - 15503
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| | ||||||| ||| |||||||| |||||||  ||||||||  || |||||| ||||||||||||| ||||| |||||||||||||||||     
T  15643 gcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactatcatgttttt- 15545  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
    | |||||||||| ||||||||||||||||||||| |||||||    
T  15544 gtagttttagtcatacctcctattttcaactccagaaacgca 15503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 15114 - 15271
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgtttttt 157  Q
    ||||||||| |||||||||| || |||||||||||||||   |||||| || ||||||||| |||||||||||||    || |||||||||||||||| |    
T  15114 gcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaactatcatgtttt-t 15212  T
Q  158 gcagttttagtcctacctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||| ||| |||||||||||||||||| || ||||||| |||| | |||||||||    
T  15213 gcagtttttgtcttacctcctattttcaacttcataaacgcacagaaataacaatttta 15271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 159402 - 159285
Alignment:
Q  83 cattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcc-taaactatcatgttttttgcagttttagtcctacctcctatt 181  Q
    |||||| ||| |||||  |||||||| ||| |||||| |||||||||||||| || | ||||||||||| |||||||||||||||||| |||| ||||||    
T  159402 catttttaccggctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactatcatattttttgcagttttagtcataccccctatt 159303  T
Q  182 ttcaactccaaaaacgca 199  Q
    |||| |||||||||||||    
T  159302 ttcacctccaaaaacgca 159285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 159016 - 159162
Alignment:
Q  54 attatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc---ctaaactatcat 150  Q
    |||| |||||||| || ||||| ||||| |||||| |||||||||  |||||| |  ||||||||| |||||||||||||  |||   |||||||||| |    
T  159016 attaggcttaattgca-ttttgatcctcgcatttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtctctctaaactatcgt 159114  T
Q  151 gttttttgcagttttagtcctacctcctattttcaactccaaaaacgca 199  Q
     |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  159115 -ttttttgcagttttagtcctaccctctattttcacctccaaaaacgca 159162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 616 - 498
Alignment:
Q  53 aattatgcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtc-ctaaactatcatg 151  Q
    ||||| ||||||||||||||||| ||||| ||||||||| ||||||  ||||||||  ||||||||| |||||||||||||  ||| ||||||||| |||    
T  616 aattaggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactat-atg 518  T
Q  152 ttttttgcagttttagtcct 171  Q
    |||||||||||||| |||||    
T  517 ttttttgcagttttggtcct 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 6393 - 6551
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    |||||||| |||||||||||||  |||||||| || ||||  ||||||||  |  || |||||||||||||||||| ||||| ||| ||| |||||||||    
T  6393 gcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattat-atgtttttt 6491  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| | |||||||| ||||| || ||||||| |||| ||||| |||||    
T  6492 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 6939 - 6778
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt-g 158  Q
    |||||||| |||||||||||  |||||||||||  | |  ||| ||||  | | |||||||||||||||||||| || ||||||||| |||||||||| |    
T  6939 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaacta-catgtttttttg 6841  T
Q  159 cagttttagtcctacct-----cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||     |||||||||||||||| ||||||| |||| ||||| |||||    
T  6840 cagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagtttta 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 6411 - 6569
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    |||||||| |||||||||||||  |||||||| || ||||  ||||||||  |  || |||||||||||||||||| ||||| ||| ||| |||||||||    
T  6411 gcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattat-atgtttttt 6509  T
Q  158 gcagttttagtccta-cctcctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    ||||||||||||||| | |||||||| ||||| || ||||||| |||| ||||| |||||    
T  6510 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 6957 - 6796
Alignment:
Q  61 ttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatgtttttt-g 158  Q
    |||||||| |||||||||||  |||||||||||  | |  ||| ||||  | | |||||||||||||||||||| || ||||||||| |||||||||| |    
T  6957 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaacta-catgtttttttg 6859  T
Q  159 cagttttagtcctacct-----cctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||||||||||     |||||||||||||||| ||||||| |||| ||||| |||||    
T  6858 cagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagtttta 6796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 46267 - 46378
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgt-cctaaactatcatg-ttttt 156  Q
    |||||||| |||||||||||||| ||||||||||| || |  ||||||||| | ||||||||||||||||||||||  | |||||||||| ||| |||||    
T  46267 gcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttttt 46365  T
Q  157 tgcagttttagtc 169  Q
    |||||||||||||    
T  46366 tgcagttttagtc 46378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 215
Target Start/End: Complemental strand, 46813 - 46655
Alignment:
Q  59 gcttaattacacttttggtcctcacattttgaccagctcagaaaaatggttatgcctcttttaaatcgaacaaaattgtcct-aaactatcatgtttttt 157  Q
    ||||||||||||||||||||||  ||||||||||| ||||  ||||||||  |   | |||||||||||||||||| ||| | ||||||| |||||||||    
T  46813 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactat-atgtttttt 46715  T
Q  158 -gcagttttagtcctacctcc-tattttcaactccaaaaacgcagagaagtgacaatttt 215  Q
     | ||||||||| ||| | || ||||| |||||||||||||||| | || ||||||||||    
T  46714 tgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaatttt 46655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 78398 - 78476
Alignment:
Q  138 cctaaactatcatgttttttgcagttttagtcctacctc-ctattttcaactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||| |||||||| ||| ||| |||| |||||||||||    
T  78398 cctaaactat-atgttttttgcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaatttta 78476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 2124 - 2034
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||| | ||||| |  ||||||||||||||    
T  2124 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacc 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 16973 - 16863
Alignment:
Q  126 gaacaaaattgtccta-aactatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagtt 223  Q
    |||||||||||||||  || |||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||||||||||| | ||| ||||| |   ||    
T  16973 gaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattacagttttaggcgatt 16874  T
Q  224 ttagacctacc 234  Q
    |||||||||||    
T  16873 ttagacctacc 16863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 4291 - 4381
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| || ||||||||||||||| ||||| ||||| |||||||| ||||| ||||| |  ||||||||||||||    
T  4291 tatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaaatgcagagaaatgacagttttaggcggttttagacctacc 4381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 11080 - 10990
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaattttacgtagttttagacctacc 234  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| | |||||||||||| |  || ||||| |  ||||||||||||||    
T  11080 tatcatttttgttgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctacc 10990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 42257 - 42329
Alignment:
Q  145 tatcatgttttttgcagttttagtcctacctcctattttc-aactccaaaaacgcagagaagtgacaatttta 216  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| |||| || |||||||||||| ||||| |||||    
T  42257 tatcatttttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagtttta 42329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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