View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12742_high_10 (Length: 399)

Name: NF12742_high_10
Description: NF12742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12742_high_10
NF12742_high_10
[»] chr8 (40 HSPs)
chr8 (268-389)||(24123128-24123249)
chr8 (74-183)||(18978070-18978179)
chr8 (268-389)||(18978846-18978967)
chr8 (62-184)||(24122920-24123043)
chr8 (62-184)||(30570196-30570318)
chr8 (74-167)||(18970961-18971054)
chr8 (74-167)||(18979077-18979170)
chr8 (268-336)||(18971165-18971233)
chr8 (62-172)||(12351959-12352070)
chr8 (59-184)||(11287811-11287937)
chr8 (81-183)||(30568944-30569046)
chr8 (59-140)||(32207309-32207391)
chr8 (77-175)||(45112923-45113021)
chr8 (74-163)||(29968298-29968387)
chr8 (81-184)||(45114457-45114559)
chr8 (78-184)||(24123842-24123944)
chr8 (76-184)||(17844328-17844435)
chr8 (74-153)||(1824049-1824128)
chr8 (74-153)||(1858494-1858573)
chr8 (59-153)||(22221335-22221430)
chr8 (59-153)||(22227677-22227772)
chr8 (74-184)||(12353301-12353410)
chr8 (62-178)||(18488208-18488325)
chr8 (74-184)||(10006395-10006506)
chr8 (273-318)||(18978285-18978330)
chr8 (77-154)||(30335693-30335770)
chr8 (91-154)||(2379894-2379957)
chr8 (74-153)||(5514032-5514111)
chr8 (74-184)||(10007702-10007813)
chr8 (74-161)||(29043449-29043536)
chr8 (83-153)||(34625171-34625241)
chr8 (82-163)||(40471107-40471189)
chr8 (83-184)||(42982594-42982698)
chr8 (62-154)||(8388500-8388593)
chr8 (60-140)||(22220424-22220505)
chr8 (81-184)||(43661323-43661427)
chr8 (59-117)||(1823587-1823646)
chr8 (59-117)||(1858032-1858091)
chr8 (76-154)||(30336471-30336549)
chr8 (341-389)||(18972758-18972806)
[»] chr4 (35 HSPs)
chr4 (59-184)||(31599824-31599950)
chr4 (59-184)||(31600925-31601051)
chr4 (62-183)||(35935474-35935596)
chr4 (62-184)||(21178034-21178157)
chr4 (74-184)||(10448200-10448310)
chr4 (74-172)||(8758789-8758887)
chr4 (74-184)||(35934393-35934503)
chr4 (62-184)||(10447045-10447168)
chr4 (74-172)||(8757725-8757822)
chr4 (76-154)||(37728535-37728613)
chr4 (77-184)||(52491549-52491654)
chr4 (61-184)||(1290137-1290262)
chr4 (59-153)||(1835073-1835168)
chr4 (59-150)||(26421597-26421688)
chr4 (59-184)||(12129658-12129785)
chr4 (59-154)||(5525394-5525490)
chr4 (59-154)||(10470581-10470677)
chr4 (74-154)||(19750545-19750625)
chr4 (74-154)||(19789181-19789261)
chr4 (75-162)||(50909634-50909722)
chr4 (120-184)||(54107956-54108020)
chr4 (77-183)||(1289151-1289258)
chr4 (59-131)||(8155771-8155845)
chr4 (137-184)||(46637797-46637844)
chr4 (74-154)||(10471358-10471438)
chr4 (59-154)||(13386502-13386598)
chr4 (86-154)||(13509329-13509397)
chr4 (59-154)||(25684969-25685065)
chr4 (74-154)||(25685792-25685872)
chr4 (85-183)||(8896851-8896949)
chr4 (59-140)||(48780283-48780365)
chr4 (74-154)||(1834170-1834251)
chr4 (74-131)||(46638718-46638775)
chr4 (59-126)||(21539069-21539137)
chr4 (82-154)||(37727755-37727827)
[»] chr3 (46 HSPs)
chr3 (59-184)||(54540730-54540856)
chr3 (83-184)||(49398186-49398287)
chr3 (59-184)||(54539790-54539916)
chr3 (74-184)||(7267694-7267804)
chr3 (74-184)||(22776752-22776862)
chr3 (312-382)||(42414765-42414835)
chr3 (62-184)||(49216285-49216408)
chr3 (74-184)||(8456528-8456639)
chr3 (74-184)||(19984900-19985010)
chr3 (59-184)||(7268767-7268893)
chr3 (59-184)||(55191935-55192061)
chr3 (59-153)||(534534-534629)
chr3 (85-184)||(4271502-4271601)
chr3 (74-177)||(54986954-54987057)
chr3 (93-173)||(22775816-22775896)
chr3 (59-154)||(29932669-29932764)
chr3 (59-154)||(29981823-29981918)
chr3 (59-183)||(7758437-7758563)
chr3 (83-184)||(10457600-10457701)
chr3 (76-184)||(19986010-19986118)
chr3 (93-184)||(47615516-47615608)
chr3 (74-184)||(12700224-12700335)
chr3 (59-125)||(24516495-24516562)
chr3 (59-154)||(6249644-6249739)
chr3 (81-173)||(54654257-54654349)
chr3 (63-153)||(8875945-8876036)
chr3 (74-184)||(47614236-47614347)
chr3 (74-160)||(31645024-31645110)
chr3 (59-152)||(34019117-34019211)
chr3 (77-183)||(52839091-52839197)
chr3 (59-184)||(55191546-55191671)
chr3 (82-154)||(40426748-40426820)
chr3 (59-154)||(47609732-47609828)
chr3 (74-154)||(47610550-47610630)
chr3 (59-140)||(6170307-6170387)
chr3 (121-184)||(6171183-6171246)
chr3 (74-117)||(12703507-12703550)
chr3 (121-179)||(6250522-6250580)
chr3 (62-154)||(23769895-23769987)
chr3 (74-115)||(29931277-29931318)
chr3 (74-115)||(29980431-29980472)
chr3 (62-154)||(46721190-46721283)
chr3 (133-174)||(49401438-49401479)
chr3 (85-184)||(26722594-26722693)
chr3 (144-184)||(49220492-49220532)
chr3 (74-154)||(51470425-51470505)
[»] chr6 (28 HSPs)
chr6 (59-179)||(26574999-26575120)
chr6 (62-184)||(10785853-10785976)
chr6 (59-184)||(1829543-1829669)
chr6 (59-184)||(10784628-10784755)
chr6 (59-181)||(16704440-16704563)
chr6 (59-184)||(14823515-14823641)
chr6 (59-184)||(14822395-14822521)
chr6 (59-170)||(26574654-26574765)
chr6 (59-154)||(8660174-8660269)
chr6 (83-184)||(29473137-29473238)
chr6 (85-154)||(27437890-27437959)
chr6 (75-154)||(5658808-5658887)
chr6 (59-184)||(7314915-7315041)
chr6 (92-184)||(7316233-7316326)
chr6 (93-154)||(26717083-26717144)
chr6 (59-154)||(3721647-3721743)
chr6 (59-153)||(17496832-17496928)
chr6 (74-154)||(6842253-6842333)
chr6 (74-154)||(8659316-8659396)
chr6 (286-318)||(10785712-10785744)
chr6 (74-140)||(3333010-3333076)
chr6 (83-153)||(3333496-3333566)
chr6 (74-140)||(8821924-8821990)
chr6 (59-117)||(12350833-12350891)
chr6 (59-141)||(16703603-16703685)
chr6 (62-117)||(30495704-30495761)
chr6 (74-154)||(34830953-34831033)
chr6 (59-154)||(34834549-34834645)
[»] chr1 (41 HSPs)
chr1 (56-184)||(44411906-44412035)
chr1 (268-350)||(44411733-44411815)
chr1 (58-184)||(39699707-39699834)
chr1 (74-184)||(44404493-44404603)
chr1 (59-184)||(45149910-45150037)
chr1 (59-184)||(14999319-14999442)
chr1 (59-184)||(39153056-39153182)
chr1 (74-184)||(45148632-45148741)
chr1 (59-153)||(24422835-24422930)
chr1 (59-153)||(52275003-52275098)
chr1 (74-184)||(39151982-39152092)
chr1 (74-176)||(39698614-39698715)
chr1 (59-178)||(14999901-15000021)
chr1 (74-170)||(45157163-45157259)
chr1 (74-184)||(36613843-36613954)
chr1 (76-172)||(40384778-40384874)
chr1 (66-153)||(43059977-43060065)
chr1 (74-154)||(51684417-51684497)
chr1 (59-153)||(43058820-43058915)
chr1 (74-184)||(43378652-43378763)
chr1 (78-183)||(11437139-11437245)
chr1 (59-153)||(35594252-35594345)
chr1 (81-153)||(31194111-31194183)
chr1 (271-318)||(44407361-44407408)
chr1 (343-389)||(44410665-44410711)
chr1 (81-150)||(51685739-51685808)
chr1 (74-154)||(24426045-24426125)
chr1 (76-184)||(33088120-33088228)
chr1 (78-184)||(11436097-11436204)
chr1 (59-153)||(25652749-25652844)
chr1 (59-132)||(33088609-33088683)
chr1 (81-153)||(30249461-30249533)
chr1 (78-154)||(43377775-43377851)
chr1 (59-154)||(52827382-52827478)
chr1 (59-154)||(52828040-52828136)
chr1 (83-154)||(2940325-2940396)
chr1 (74-153)||(50680382-50680461)
chr1 (59-132)||(7675451-7675525)
chr1 (92-154)||(35595162-35595223)
chr1 (81-153)||(30248170-30248241)
chr1 (74-154)||(52276133-52276213)
[»] chr5 (29 HSPs)
chr5 (59-184)||(28539760-28539886)
chr5 (59-184)||(36486428-36486554)
chr5 (59-184)||(28538711-28538837)
chr5 (59-184)||(33160227-33160352)
chr5 (83-184)||(1797237-1797338)
chr5 (78-180)||(36485355-36485457)
chr5 (59-184)||(24332948-24333074)
chr5 (59-184)||(40255612-40255738)
chr5 (59-140)||(25523104-25523186)
chr5 (74-184)||(19752962-19753073)
chr5 (74-183)||(22940563-22940672)
chr5 (74-184)||(16650043-16650154)
chr5 (74-184)||(18486841-18486952)
chr5 (74-140)||(21835091-21835157)
chr5 (74-154)||(42195183-42195263)
chr5 (59-113)||(33158133-33158188)
chr5 (59-140)||(18154529-18154609)
chr5 (96-184)||(18485218-18485307)
chr5 (76-153)||(25524069-25524146)
chr5 (74-154)||(5778806-5778886)
chr5 (61-140)||(25055449-25055529)
chr5 (81-184)||(1016804-1016906)
chr5 (93-184)||(5961476-5961567)
chr5 (74-153)||(19754101-19754180)
chr5 (59-140)||(5777934-5778016)
chr5 (85-178)||(16788694-16788788)
chr5 (62-107)||(17825536-17825581)
chr5 (85-181)||(14061555-14061650)
chr5 (59-153)||(25056351-25056447)
[»] chr2 (27 HSPs)
chr2 (82-184)||(22587559-22587661)
chr2 (59-184)||(22587894-22588019)
chr2 (74-173)||(36450872-36450971)
chr2 (74-184)||(7899822-7899932)
chr2 (74-184)||(36449829-36449939)
chr2 (59-184)||(38840433-38840559)
chr2 (59-182)||(13570499-13570623)
chr2 (74-175)||(41878145-41878245)
chr2 (59-184)||(7898726-7898852)
chr2 (59-184)||(11257657-11257783)
chr2 (59-172)||(38839277-38839391)
chr2 (59-153)||(13030325-13030419)
chr2 (82-184)||(32739710-32739812)
chr2 (59-153)||(18797282-18797377)
chr2 (74-184)||(22848242-22848353)
chr2 (83-153)||(1410060-1410130)
chr2 (76-154)||(18299426-18299504)
chr2 (74-184)||(41879152-41879262)
chr2 (76-153)||(11938760-11938836)
chr2 (74-154)||(11258781-11258861)
chr2 (74-154)||(24475275-24475355)
chr2 (59-153)||(18905959-18906053)
chr2 (59-152)||(18300697-18300790)
chr2 (74-140)||(23869519-23869585)
chr2 (83-153)||(22067753-22067823)
chr2 (62-154)||(26545491-26545584)
chr2 (78-150)||(18904422-18904494)
[»] scaffold0632 (1 HSPs)
scaffold0632 (59-184)||(3248-3374)
[»] scaffold0302 (2 HSPs)
scaffold0302 (74-180)||(17521-17627)
scaffold0302 (74-184)||(18716-18826)
[»] chr7 (23 HSPs)
chr7 (59-178)||(14999101-14999221)
chr7 (78-184)||(34352726-34352832)
chr7 (62-184)||(42886226-42886349)
chr7 (59-183)||(18371459-18371585)
chr7 (74-153)||(31659674-31659753)
chr7 (76-153)||(22629539-22629616)
chr7 (74-184)||(7501791-7501902)
chr7 (85-184)||(14998042-14998140)
chr7 (74-153)||(18372428-18372507)
chr7 (59-184)||(769448-769574)
chr7 (94-171)||(770714-770791)
chr7 (93-178)||(32253373-32253458)
chr7 (143-184)||(34351608-34351649)
chr7 (83-163)||(48933727-48933805)
chr7 (59-153)||(7500489-7500584)
chr7 (59-131)||(47369816-47369889)
chr7 (82-151)||(21505473-21505542)
chr7 (74-154)||(3227158-3227238)
chr7 (59-154)||(17781696-17781792)
chr7 (59-154)||(47525337-47525433)
chr7 (62-154)||(128571-128664)
chr7 (85-184)||(6618269-6618369)
chr7 (74-154)||(31949373-31949453)
[»] scaffold2034 (2 HSPs)
scaffold2034 (74-184)||(284-394)
scaffold2034 (81-184)||(918-1021)
[»] scaffold0059 (2 HSPs)
scaffold0059 (94-184)||(3746-3836)
scaffold0059 (74-170)||(4684-4780)
[»] scaffold0003 (1 HSPs)
scaffold0003 (85-154)||(49403-49472)
[»] scaffold0294 (1 HSPs)
scaffold0294 (59-154)||(5408-5504)
[»] scaffold0093 (2 HSPs)
scaffold0093 (59-154)||(2435-2531)
scaffold0093 (59-154)||(7058-7154)
[»] scaffold0019 (2 HSPs)
scaffold0019 (59-154)||(61429-61525)
scaffold0019 (59-154)||(60125-60221)
[»] scaffold0049 (2 HSPs)
scaffold0049 (74-140)||(7399-7465)
scaffold0049 (110-153)||(7890-7933)
[»] scaffold0586 (2 HSPs)
scaffold0586 (74-140)||(6394-6460)
scaffold0586 (76-153)||(8998-9074)
[»] scaffold1303 (1 HSPs)
scaffold1303 (59-154)||(1474-1570)
[»] scaffold0112 (1 HSPs)
scaffold0112 (62-154)||(37185-37278)


Alignment Details
Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 24123128 - 24123249
Alignment:
Q  268 tcaaatcttgatcttcatttcatcttatcattccaaatccaatccagattctttttgcatacttggtattgaactatctgagttatggttgtcgttattt 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||    
T  24123128 tcaaatcttgatcttcatttcatcttatcattccaaatccaatccagattctttttgcatacttggtattggactatatgagttatggttctcattattt 24123227  T
Q  368 gttttttgttctctttgatgat 389  Q
    ||||||||||||||||| ||||    
T  24123228 gttttttgttctctttgttgat 24123249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 74 - 183
Target Start/End: Original strand, 18978070 - 18978179
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18978070 cccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttgatccttttttccaattttgacgggtcaatgcctacgtggca 18978169  T
Q  174 cgccacgtgt 183  Q
    ||||||||||    
T  18978170 cgccacgtgt 18978179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 18978967 - 18978846
Alignment:
Q  268 tcaaatcttgatcttcatttcatcttatcattccaaatccaatccagattctttttgcatacttggtattgaactatctgagttatggttgtcgttattt 367  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| || ||||||    
T  18978967 tcaaatcttcattttcatttcatcttatcattccaaatccaatccagatcctgtttgcatacttggtattgaactatatgagttatggttctcattattt 18978868  T
Q  368 gttttttgttctctttgatgat 389  Q
    ||||||||||||||||| ||||    
T  18978867 gttttttgttctctttgttgat 18978846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 24122920 - 24123043
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||| ||||| |||||||||||| || |||||| | ||| |||||||||||||||||||| ||||| ||||||| | |||||||||||||||||    
T  24122920 ttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttctttgcatctttggtccttttggtcaattttgaccggtcaa 24123019  T
Q  161 tgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||| || |||||    
T  24123020 tgcctacgtggcacgacatgtgtg 24123043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 30570318 - 30570196
Alignment:
Q  62 ttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaat 161  Q
    |||||||||| | || || |||||||||||| |||||||||||| |||||||||||   |||||| ||||| ||||||| ||||||||||||| ||||||    
T  30570318 ttgcaattttgatccttatgtacaaaaattagaattttggccccctaagatttagcccttttgcatctttggtccttttggccaattttgaccagtcaat 30570219  T
Q  162 gcctacgtggcacgccacgtgtg 184  Q
    | |||||||||||||||||||||    
T  30570218 gtctacgtggcacgccacgtgtg 30570196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 18970961 - 18971054
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctac 167  Q
    |||||||||||||||| |||||||||| ||||| |||||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18970961 cccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgcaactttggtcctttttgccaattttgaccggtcaatgcctac 18971054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 18979170 - 18979077
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctac 167  Q
    ||||||| || ||||| |||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||    
T  18979170 cccctaaatataaaaactacaattttggccccttatgatttagcccatttgcaactttgatcctttttgccaattttgacaggtcaatgcctac 18979077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 18971165 - 18971233
Alignment:
Q  268 tcaaatcttgatcttcatttcatcttatcattccaaatccaatccagattctttttgcatacttggtat 336  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18971165 tcaaatcttcattttcatttcatcttatcattccaaatccaatccagattctgtttgcatacttggtat 18971233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 12351959 - 12352070
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||| ||||| |||||||||||| |||||||||| |||| ||||||||||| || |||||| ||| | |||||| | |||||||||||||||||    
T  12351959 ttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcctcattgcaattttaacccttttggacaattttgaccggtcaa 12352058  T
Q  161 tgcctacgtggc 172  Q
    ||| || |||||    
T  12352059 tgcatatgtggc 12352070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 11287811 - 11287937
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  ||| ||||||||| ||| ||||||||||||||| ||||| ||| || |||||||| ||||||| |||||  ||||||||||||||    
T  11287811 aacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgcaattttgatcatttttatcaattttgaccggt 11287910  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||| ||||| | |||| ||||| ||||    
T  11287911 caacgcctatgcggcatgccacatgtg 11287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 30568944 - 30569046
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacg 180  Q
    ||||||||| || |||||||  ||| |||||||||||  ||||||| ||||| ||||||| ||||||| ||||| ||||||| |||||||||||||||||    
T  30568944 gtacaaaaactataattttgatcccctaagatttagcccctttgcatctttggtccttttggccaattgtgaccagtcaatgtctacgtggcacgccacg 30569043  T
Q  181 tgt 183  Q
    |||    
T  30569044 tgt 30569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 32207391 - 32207309
Alignment:
Q  59 aacttgcaattttaac-ccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||| |||||||    
T  32207391 aacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctttgcatctttggtcctttt 32207309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 45112923 - 45113021
Alignment:
Q  77 ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacg 175  Q
    |||||||||||||||| |||||||| ||| ||||| |||||  |||||||| ||||||| |||||  |||||||||| ||||||| |||||||||||||    
T  45112923 ctaagtacaaaaattataattttggtcccctaagaattagcccctttgcaattttgatcttttttatcaattttgactggtcaatacctacgtggcacg 45113021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 29968387 - 29968298
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgc 163  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||  | |||||||||| ||| |||| ||||||||||||||||||||||    
T  29968387 cccctaagtacaaaaactacaattctggtcccctaagatttagccccattgcaactttaatcattttggccaattttgaccggtcaatgc 29968298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 45114559 - 45114457
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacg 180  Q
    ||||| ||| ||||||||||||| || |||||||| | || |||||||||| ||| |||| |  |||||||||||||||||||||||||||||| |||||    
T  45114559 gtacacaaactacaattttggcctct-aagatttaacctcattgcaactttaatcattttggttaattttgaccggtcaatgcctacgtggcacaccacg 45114461  T
Q  181 tgtg 184  Q
    ||||    
T  45114460 tgtg 45114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 24123944 - 24123842
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgcc 177  Q
    ||||||| |||||||||||||| ||| | |||||||||||  ||||||| ||||| ||||||| | |||||||||||||| ||||    |||||||||||    
T  24123944 taagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtccttttggtcaattttgaccggttaatg----cgtggcacgcc 24123849  T
Q  178 acgtgtg 184  Q
    |||||||    
T  24123848 acgtgtg 24123842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 17844328 - 17844435
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacg 175  Q
    |||| ||||||||| ||||||||||| |||| || ||||| | |||||  | ||||| ||||||| ||||||||||| |||||||||||||| |||||||    
T  17844328 cctatgtacaaaaactacaattttggtccct-aacatttaacctctttatatctttggtccttttggccaattttgatcggtcaatgcctacatggcacg 17844426  T
Q  176 ccacgtgtg 184  Q
     ||||||||    
T  17844427 tcacgtgtg 17844435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 1824128 - 1824049
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||||| ||||||||||||||| |||||||||||   |||||| ||||| ||||||| | ||||||||||    
T  1824128 cccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatctttggtccttttggtcaattttgac 1824049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 1858573 - 1858494
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||||| ||||||||||||||| |||||||||||   |||||| ||||| ||||||| | ||||||||||    
T  1858573 cccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatctttggtccttttggtcaattttgac 1858494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 22221430 - 22221335
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| ||||||  |||| |||||||||| |||| |||||||||||  |||| || ||||||||||||| ||||||||||||    
T  22221430 aacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctttacatctttgatccttttagccaattttgac 22221335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 22227772 - 22227677
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| ||||||  |||| |||||||||| |||| |||||||||||  |||| || ||||||||||||| ||||||||||||    
T  22227772 aacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctttacatctttgatccttttagccaattttgac 22227677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 12353410 - 12353301
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    ||||||||||||||| | | |||||||||||| |||||||||||  | |||||| ||| || ||||| | |||||||||||||||||||| ||| ||||     
T  12353410 cccctaagtacaaaact-ataattttggccccctaagatttagccccattgcaattttaattcttttggtcaattttgaccggtcaatgcttacatggcg 12353312  T
Q  174 cgccacgtgtg 184  Q
     ||||||||||    
T  12353311 tgccacgtgtg 12353301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 18488325 - 18488208
Alignment:
Q  62 ttgcaattttaa-cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||||  ||||||  |||||||| ||||||||||||||  |||||| || |  ||||||| ||||| |||||||  ||| |||||||| |||||    
T  18488325 ttgcaattttagtcccctatatacaaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttgaccagttttgaccagtcaa 18488226  T
Q  161 tgcctacgtggcacgcca 178  Q
    ||||||||||||| ||||    
T  18488225 tgcctacgtggcatgcca 18488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 10006395 - 10006506
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    ||||||||||  ||||  |||||||||||||| |||||||||||  ||||||| ||||| ||||||| | ||||||||||    |||| |||||||||||    
T  10006395 cccctaagtatcaaaacaacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggc 10006494  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  10006495 aggccacgtgtg 10006506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 18978285 - 18978330
Alignment:
Q  273 tcttgatcttcatttcatcttatcattccaaatccaatccagattc 318  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  18978285 tcttcatcttcatttcatcttatcattcgaaatccaatccagattc 18978330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 30335693 - 30335770
Alignment:
Q  77 ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||||||||||  |||| |||||||||||  ||||||| ||||| |||||||   |||||||||||    
T  30335693 ctaagtacaaaaattacaattttaaccccctaagatttagcccctttgcatctttggtccttttgttcaattttgacc 30335770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 2379957 - 2379894
Alignment:
Q  91 tacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||||||||||||||||||  |||||| ||||| | ||||| | |||||||||||    
T  2379957 tacaattttggccccttaagatttagctcatttgcatctttggttcttttggtcaattttgacc 2379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 5514032 - 5514111
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||  ||||||| ||||| |||||||   ||||||||||    
T  5514032 cccctaagtacaaaaactacaattttgcccccctaaaatttagcccctttgcatctttggtccttttgatcaattttgac 5514111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 10007813 - 10007702
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    |||||||||| | |||  |||||||||| ||| |||||||||||  ||||||| ||||| ||||||| | ||||||||||    |||| |||||||||||    
T  10007813 cccctaagtatagaaaccacaattttggtcccctaagatttagcccctttgcatctttggtccttttcgtcaattttgacttattcaacgcctacgtggc 10007714  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  10007713 aggccacgtgtg 10007702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 29043449 - 29043536
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaat 161  Q
    |||||| ||||||||| |||||||||  |||  |||||||||||  ||||| | ||||||||||||| | ||||||||||| ||||||    
T  29043449 cccctatgtacaaaaactacaattttttccctctaagatttagcccctttgtatctttgatccttttagacaattttgaccagtcaat 29043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 34625241 - 34625171
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||| ||||||||| ||||| || |||||| | |||| ||||||||||||||||| | ||||||||||    
T  34625241 acaaaaactacaattttagccccctatgatttaccctcttcgcaactttgatccttttggtcaattttgac 34625171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 40471189 - 40471107
Alignment:
Q  82 tacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtcaatgc 163  Q
    |||||||| ||||||||| ||||||||||||||| | |||||| | ||||| || |||| | |||||||||||| ||||||||    
T  40471189 tacaaaaactacaattttagccccttaagatttaacctctttgtatctttggtcattttggtcaattttgaccgagtcaatgc 40471107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 42982698 - 42982594
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatccttttt---gccaattttgaccggtcaatgcctacgtggcacgccac 179  Q
    ||||||| |||||||||| ||||| |||| |||||   ||| ||| ||||||| |||||   ||||||||||||||||||| ||||| |||| |||| ||    
T  42982698 acaaaaactacaattttgacccctcaagaattagcccatttacaattttgatcattttttttgccaattttgaccggtcaaagcctatgtggtacgctac 42982599  T
Q  180 gtgtg 184  Q
    |||||    
T  42982598 gtgtg 42982594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 8388500 - 8388593
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| |||| || ||||||||| || |||||||||||| |||||||||||  ||||||   |||| |||||||  ||||||||||||    
T  8388500 ttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctttgcgtttttggtccttttgcccaattttgacc 8388593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 22220424 - 22220505
Alignment:
Q  60 acttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    |||||||||||| ||||| || ||| ||||| ||||||||||||||| |||||||||||   |||||| ||||| |||||||    
T  22220424 acttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatttgcatctttggtcctttt 22220505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 43661323 - 43661427
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggcacgccac 179  Q
    ||||||||| || |||||||||||| |||||||||||  ||||||| ||||| | ||||| | ||| |||||||  ||||| || || |||||| |||||    
T  43661323 gtacaaaaactataattttggccccctaagatttagcccctttgcatctttggttcttttggtcaactttgaccaagtcaacgcatatgtggcatgccac 43661422  T
Q  180 gtgtg 184  Q
    |||||    
T  43661423 gtgtg 43661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 1823587 - 1823646
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagc 117  Q
    ||||||||||||| |||| ||||||||||||| |||||||| || ||| |||||||||||    
T  1823587 aacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagc 1823646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 1858032 - 1858091
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagc 117  Q
    ||||||||||||| |||| ||||||||||||| |||||||| || ||| |||||||||||    
T  1858032 aacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagc 1858091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 30336549 - 30336471
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||| |||||||||  |||  |||||||||||   |||||| ||||| ||||||| | |||||||||||    
T  30336549 cctaagtacaaaaactacaattttaaccctctaagatttagccattttgcatctttggtccttttggtcaattttgacc 30336471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 18972758 - 18972806
Alignment:
Q  341 ctatctgagttatggttgtcgttatttgttttttgttctctttgatgat 389  Q
    |||| |||||||||||| || |||||| |||||||||||||||| ||||    
T  18972758 ctatatgagttatggttctcattatttattttttgttctctttgttgat 18972806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 6e-44; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 31599824 - 31599950
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||| ||| |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  31599824 aacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctttgcaactttgatcctttttgccaattttgaccggt 31599923  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| ||||||||||    
T  31599924 caatgcctacgtggcatgccacgtgtg 31599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 31601051 - 31600925
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||   |||||||||||||||||||||| ||||||||||||||    
T  31601051 aacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatttgcaactttgatcctttttgtcaattttgaccggt 31600952  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||| |||||| ||||||||||    
T  31600951 caatgcctatgtggcatgccacgtgtg 31600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 62 - 183
Target Start/End: Complemental strand, 35935596 - 35935474
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    ||||||||||| |||| |||||||| ||| ||||||||||||||| ||||||||||| || |||||||||| |||||||| |||||||||||||||||||    
T  35935596 ttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcctcattgcaactttaatccttttggccaattttgaccggtcaa 35935497  T
Q  161 tgcctacgtggcacgccacgtgt 183  Q
    |||||| ||||||||||||||||    
T  35935496 tgcctatgtggcacgccacgtgt 35935474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 21178034 - 21178157
Alignment:
Q  62 ttgcaattttaa-cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||| | |||||| | ||||||| |||||||||| |||| ||| |||||||   ||||||||||||||| ||||||||||||||||| ||||||    
T  21178034 ttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttttgcaactttgatcatttttgccaattttgactggtcaa 21178133  T
Q  161 tgcctacgtggcacgccacgtgtg 184  Q
    |||||| |||||||||||||||||    
T  21178134 tgcctatgtggcacgccacgtgtg 21178157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 10448310 - 10448200
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||||||||| ||||||||||||||  |||||| ||||  ||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  10448310 cccctatgtacaaaaactacaattttggccctctaagatatagcccctttgcatctttggtccttttggccaattttgaccagtcaatgcctacgtggca 10448211  T
Q  174 cgccacgtgtg 184  Q
     ||||||||||    
T  10448210 tgccacgtgtg 10448200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 8758887 - 8758789
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggc 172  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| | |||||| ||| |||||||| | ||||||||| || ||||||||||||||||    
T  8758887 cccctaagtacagaaactacaattttggccccttaagatttagctccattgcaattttaatccttttggtcaattttgatcgatcaatgcctacgtggc 8758789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 35934393 - 35934503
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||| | |||||| ||||||||||||||||||||||||  | |||||||||| || ||||| | ||||||||||| ||||||||||||||||||    
T  35934393 cccctaagtaaagaaattataattttggccccttaagatttagccccattgcaactttaattcttttggtcaattttgaccagtcaatgcctacgtggca 35934492  T
Q  174 cgccacgtgtg 184  Q
     | ||||||||    
T  35934493 tgtcacgtgtg 35934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 10447045 - 10447168
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    ||||||||||| |||| || |||||||||  ||||||||  |||| |||||||||||  ||||||| ||||| ||||||| || |||||| ||| |||||    
T  10447045 ttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccctttgcatctttggtccttttggctaattttaaccagtcaa 10447144  T
Q  161 tgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||||||||||||    
T  10447145 tgcctacgtggcacgccacgtgtg 10447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 8757725 - 8757822
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggc 172  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||  | |||||| ||| |||||||| | ||||||||| |||||||||||||||||||    
T  8757725 cccctaagtacagaaactacaattttggacccttaagatttagccccattgcaattttaatccttttggtcaattttga-cggtcaatgcctacgtggc 8757822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 37728613 - 37728535
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||| ||||||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  37728613 cctatgtacaaaaactacaattttgaccctttaagatttagcttctttgcatctttgatccttttagtcaattttgacc 37728535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 52491654 - 52491549
Alignment:
Q  77 ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgc 176  Q
    |||| |||| ||| ||||||||||||||| ||| |||||||  | |||||||||| |||||||| | |||||||||| |||||||||||||||||  |||    
T  52491654 ctaaatacagaaactacaattttggccccctaaaatttagccccattgcaactttaatccttttggtcaattttgacaggtcaatgcctacgtgg--cgc 52491557  T
Q  177 cacgtgtg 184  Q
    ||||||||    
T  52491556 cacgtgtg 52491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 1290262 - 1290137
Alignment:
Q  61 cttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtc 158  Q
    |||||||||||  ||| ||||||||||||| ||||||||| ||||| ||||||||| |  ||||||| ||||| ||||||| | |||||||||||| |||    
T  1290262 cttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccctttgcatctttggtccttttggtcaattttgaccgagtc 1290163  T
Q  159 aatgcctacgtggcacgccacgtgtg 184  Q
    || ||||| |||||| ||||| ||||    
T  1290162 aacgcctaagtggcatgccacatgtg 1290137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 1835168 - 1835073
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| ||||||  |||| |||||||||| |||| |||||||||||  ||||||| ||||| ||||||| ||||||||||||    
T  1835168 aacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttagccaattttgac 1835073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 26421688 - 26421597
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaatttt 150  Q
    ||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||  | |||||| ||||||| |||| | |||||||    
T  26421688 aacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagc-ccattgcaaatttgatcattttagtcaatttt 26421597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 12129658 - 12129785
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cgg 156  Q
    |||||||||||||  |||| |||||||||||| |||||||||| ||||||||||||||||   |||||| ||||| || ||||   ||||||||||        
T  12129658 aacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgcatctttggtcattttgatcaattttgacttat 12129757  T
Q  157 tcaatgcctacgtggcacgccacgtgtg 184  Q
    |||| |||||||||||| ||||||||||    
T  12129758 tcaacgcctacgtggcaggccacgtgtg 12129785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 5525394 - 5525490
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  5525394 aacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 5525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 10470581 - 10470677
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| |||| |||||||| ||||| ||||||| | |||| |||||||||||  | ||||||||||| |||||||   |||||||||||    
T  10470581 aacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagccccattgcaactttggtccttttgatcaattttgacc 10470677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 19750625 - 19750545
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||| |||||||||  |||| |||||||||||  | |||||| |||||||||||| | || ||||||||    
T  19750625 cccctaagtacaaaaactacaattttacccccctaagatttagccccattgcaaatttgatccttttggtcacttttgacc 19750545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 19789181 - 19789261
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||| |||||||||  |||| |||||||||||  | |||||| |||||||||||| | || ||||||||    
T  19789181 cccctaagtacaaaaactacaattttacccccctaagatttagccccattgcaaatttgatccttttggtcacttttgacc 19789261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 50909722 - 50909634
Alignment:
Q  75 ccctaagtacaaaaattacaattttggcccc-ttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatg 162  Q
    ||||| ||| ||||| |||||||||| |||| ||||||||||||  ||||||| ||||| |||||||   |||||||||||||||||||    
T  50909722 ccctatgtataaaaactacaattttgacccccttaagatttagcccctttgcatctttggtccttttgatcaattttgaccggtcaatg 50909634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 54107956 - 54108020
Alignment:
Q  120 ctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||| ||||| || |||| ||||||||| ||| |||||||||||| ||||||||||||||||    
T  54107956 ctttgcatctttggtctttttggccaattttaaccagtcaatgcctacatggcacgccacgtgtg 54108020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 1289151 - 1289258
Alignment:
Q  77 ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcacg 175  Q
    ||||||| ||||| ||||||||| ||| ||||||||||| |  | ||||| ||||| ||||||| | |||||||||||| ||||| || || |||||| |    
T  1289151 ctaagtataaaaactacaattttagcctcttaagatttaacccccttgcatctttggtccttttggtcaattttgaccgagtcaacgcttaagtggcatg 1289250  T
Q  176 ccacgtgt 183  Q
    ||||||||    
T  1289251 ccacgtgt 1289258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 8155771 - 8155845
Alignment:
Q  59 aacttgcaattttaac--ccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaacttt 131  Q
    |||||||||||||| |  |||||||| |||||| ||||||||||||||| |||||||||||  ||||||| ||||    
T  8155771 aacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgcatcttt 8155845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 46637797 - 46637844
Alignment:
Q  137 tttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  46637797 ttttttccaattttgaccggtcaatgcctacgtggcatgccacatgtg 46637844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 10471438 - 10471358
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  10471438 cccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 10471358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 13386598 - 13386502
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||| | |||| |||||| ||||  | ||||||||||| |||||||  ||||||||||||    
T  13386598 aacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagccccattgcaactttggtccttttgaccaattttgacc 13386502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 13509397 - 13509329
Alignment:
Q  86 aaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||| ||||||||||  ||| |||||||||||  ||||||| ||||| ||||||| |||||||||||||    
T  13509397 aaaactacaattttgatcccctaagatttagcccctttgcacctttgctccttttggccaattttgacc 13509329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 25684969 - 25685065
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| |||| |||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||   |||||||||||    
T  25684969 aacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgatcaattttgacc 25685065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 25685872 - 25685792
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  25685872 cccctaagtaccaaaaccacaatttagaccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 25685792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 8896949 - 8896851
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcacgccacgtgt 183  Q
    |||||| | |||||||| |||||||||||||||  ||||||||  |||| | |||| | |||||||||||| ||||| ||||| |||||| |||||||||    
T  8896949 aaaaatgataattttggtcccttaagatttagcccctttgcaatattga-ctttttggtcaattttgaccgagtcaacgcctaagtggcatgccacgtgt 8896851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 48780283 - 48780365
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||    
T  48780283 aacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtcctttt 48780365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 1834170 - 1834251
Alignment:
Q  74 cccctaagtacaaaaattacaattttggcccct-taagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||| ||| ||||| |||||||||||||||  |||||||||||   |||||| ||||| ||||||| | |||||||||||    
T  1834170 cccctatgtataaaaactacaattttggcccccctaagatttagcccatttgcatctttggtccttttggtcaattttgacc 1834251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 46638775 - 46638718
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaacttt 131  Q
    |||||| | ||||||||||||||||| ||||| ||||||||||   ||||||||||||    
T  46638775 cccctatgaacaaaaattacaattttagccccctaagatttagtccctttgcaacttt 46638718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 21539137 - 21539069
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgca 126  Q
    |||||||||||||  || |||||||  ||||| |||||||||| |||| |||||||||||| |||||||    
T  21539137 aacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgca 21539069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 37727755 - 37727827
Alignment:
Q  82 tacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||| |||||||||  |||||||||||||||  |||||| | ||||| || |||| | |||||||||||    
T  37727755 tacaaaaactacaattttaaccccttaagatttagtctctttgtatctttggtcattttagtcaattttgacc 37727827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 6e-44; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 54540856 - 54540730
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  54540856 aacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccctttgcaactttgatcctttttgtcaattttgaccggt 54540757  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| ||||||||||    
T  54540756 caatgcctacgtggcatgccacgtgtg 54540730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 49398186 - 49398287
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtg 182  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||    
T  49398186 acaaaaattacaattttggcctcttaagatttagctcatttgcaactttgatcctttttaccaatgttgaccggtcaatgcctacgtggcacgccatgtg 49398285  T
Q  183 tg 184  Q
    ||    
T  49398286 tg 49398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 54539790 - 54539916
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||  ||| ||||||||||||  ||||||||||||||||||||||||||||||||| |||    
T  54539790 aacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcatttgcaactttgatcctttttgccaattttgactggt 54539889  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||| || ||||||||| ||||||||||    
T  54539890 caaagcatacgtggcatgccacgtgtg 54539916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 7267694 - 7267804
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||| || |||||||||| |||||||| | |||||||||||||||||||| ||| |||||    
T  7267694 cccctaagtacagaaactacaattttggccccctaagatttagcctcattgcaactttaatccttttggtcaattttgaccggtcaatgcatacatggca 7267793  T
Q  174 cgccacgtgtg 184  Q
    |||||||||||    
T  7267794 cgccacgtgtg 7267804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 22776862 - 22776752
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||||||||| ||||||||||||||| ||||| |||||  |||||||  |||| ||| |||| |||||||||||||||||||||||||||||||    
T  22776862 cccctatgtacaaaaactacaattttggccccctaagaattagcccctttgcatatttggtccattttcccaattttgaccggtcaatgcctacgtggca 22776763  T
Q  174 cgccacgtgtg 184  Q
     ||||||||||    
T  22776762 tgccacgtgtg 22776752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 42414835 - 42414765
Alignment:
Q  312 cagattctttttgcatacttggtattgaactatctgagttatggttgtcgttatttgttttttgttctctt 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  42414835 cagattctttttgcatacttggtattgaactatctgagttatggttctcattatttgttttttgttctctt 42414765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 49216285 - 49216408
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||| ||||| || ||||||||| ||||||| || |||||||||||||||||  |||||| |||||||| |||| |||||||||||||| ||||    
T  49216285 ttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcatttgcatctttgatcattttggccaattttgaccgatcaa 49216384  T
Q  161 tgcctacgtggcacgccacgtgtg 184  Q
    || |||||||||| | ||||||||    
T  49216385 tgtctacgtggcatgtcacgtgtg 49216408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 8456528 - 8456639
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggc 172  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||| || |||||| |||||||||||| | |||||||||||  ||||| |||| ||||||    
T  8456528 cccctaaatacaaaaactacaattttggccccctaagatttagcctcattgcaaatttgatccttttagtcaattttgacctagtcaacgcctgcgtggc 8456627  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  8456628 atgccacgtgtg 8456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 19984900 - 19985010
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||||||||| |||||||||| ||| |||||||||| |  ||||||| ||||| ||||||| | ||||||||||| ||||||||||||||||||    
T  19984900 cccctatgtacaaaaactacaattttgaccctttaagatttaacccctttgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtggca 19984999  T
Q  174 cgccacgtgtg 184  Q
     ||||| ||||    
T  19985000 tgccacatgtg 19985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 7268893 - 7268767
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  || |||||||| | ||| ||||||||||||| | ||||||||||   | |||||| ||| ||||||||   ||||||||||||||    
T  7268893 aacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgcaattttaatccttttgatcaattttgaccggt 7268794  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||| ||||||||||||||||||||    
T  7268793 caatgcttacgtggcacgccacgtgtg 7268767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 55192061 - 55191935
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  ||| ||||||||||||| |||||||||||||||| |||| ||| |  |||||||| ||||||| |||||| ||||||||| ||||    
T  55192061 aacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctttgcaattttgatcatttttgtcaattttgatcggt 55191962  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
     |||| |||| |||||| |||| ||||    
T  55191961 taatgtctacatggcacaccacatgtg 55191935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 534534 - 534629
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||| |||| ||||||||| ||||||||||||||| ||||||||||| | |||||| ||||| ||| ||| ||||||||||||    
T  534534 aacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcctatttgcatctttggtccatttggccaattttgac 534629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 4271502 - 4271601
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||| ||||||||| ||  |||||||||||||   |||||||||||||||||||||| ||||||||||||||||||| |||  || |||||||| ||||    
T  4271502 aaaaactacaattttagcatcttaagatttagcccatttgcaactttgatcctttttgtcaattttgaccggtcaatgtctatatgacacgccacatgtg 4271601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 54987057 - 54986954
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||| ||||| || ||||||| |||  |||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||  ||| ||||||    
T  54987057 cccctatgtataaaaactataattttgaccctctaagatttagctcctttgcatctttgatcattttggccaattttgaccggtcaatttctatgtggca 54986958  T
Q  174 cgcc 177  Q
    ||||    
T  54986957 cgcc 54986954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 22775816 - 22775896
Alignment:
Q  93 caattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||||  |||| |||||  |||||||  |||| |||||||| |||||||||||||||||||||||||||||||    
T  22775816 caattttggccccccaagaattagcccctttgcagatttggtcctttttcccaattttgaccggtcaatgcctacgtggca 22775896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 29932764 - 29932669
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||   ||||||||   |  ||||||| |||||||||||||    
T  29932764 aacttgcaattttggcccctaagtacaaaaactacaattttgaccccttaagatttagtccctttgcaataatagtccttttggccaattttgacc 29932669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 29981918 - 29981823
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||   ||||||||   |  ||||||| |||||||||||||    
T  29981918 aacttgcaattttggcccctaagtacaaaaactacaattttgaccccttaagatttagtccctttgcaataatagtccttttggccaattttgacc 29981823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 7758437 - 7758563
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-gg 156  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| ||||| ||||||||| |  ||||| | ||||| ||||||| | |||||||||||  |    
T  7758437 aacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccctttgtatctttggtccttttggtcaattttgacctag 7758536  T
Q  157 tcaatgcctacgtggcacgccacgtgt 183  Q
    |||| || || |||||| |||||||||    
T  7758537 tcaacgcttaagtggcatgccacgtgt 7758563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 10457600 - 10457701
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtg 182  Q
    ||||||| ||||||||||||||| || || ||||  | |||| |  |||| |||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  10457600 acaaaaactacaattttggccccctaggaattagtctatttgtatatttggtcctttttcccaattttgactggtcaatgcctacgtggcattccacgtg 10457699  T
Q  183 tg 184  Q
    ||    
T  10457700 tg 10457701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 19986118 - 19986010
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacg 175  Q
    |||| ||| ||||| |||||||||| |||  ||||||||| |  ||||||| ||||| || |||  | ||||||||||| |||||||||||||||||| |    
T  19986118 cctatgtataaaaactacaattttgaccctctaagatttaacccctttgcatctttggtcatttcggtcaattttgaccagtcaatgcctacgtggcatg 19986019  T
Q  176 ccacgtgtg 184  Q
    |||||||||    
T  19986018 ccacgtgtg 19986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 47615608 - 47615516
Alignment:
Q  93 caattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||| |||||||||||  ||||||| ||||| ||||||| | ||||||||||    ||||||||||||||||| ||||||||||    
T  47615608 caattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 47615516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 12700224 - 12700335
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    |||||||||||||||| |||||||||| |||| || ||||||||  | ||||| ||||| ||||||| | ||||||||||    |||| |||||||||||    
T  12700224 cccctaagtacaaaaactacaattttgaccccctatgatttagccacattgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggc 12700323  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  12700324 aggccacgtgtg 12700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 24516495 - 24516562
Alignment:
Q  59 aacttgcaattttaac-ccctaagtacaaaaattacaattttggccccttaagatttagcttctttgc 125  Q
    |||||||||||||  | ||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  24516495 aacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgc 24516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 6249644 - 6249739
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||||| |||| ||||||||||| |||||||||  ||| |||||||||||  || |||||| ||||||||||||   |||||||||||    
T  6249644 aacttgcaattttaatcccttaagtacaaaaactacaattttatccc-ttaagatttagtctcattgcaaatttgatccttttgatcaattttgacc 6249739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 173
Target Start/End: Complemental strand, 54654349 - 54654257
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    ||||||||||||||||||| ||||  ||  ||||||    |||||| |||| |||||||| ||||| ||||||||||||||| ||||||||||    
T  54654349 gtacaaaaattacaattttagccctctagaatttagaccatttgcatctttaatccttttagccaactttgaccggtcaatgtctacgtggca 54654257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 8875945 - 8876036
Alignment:
Q  63 tgcaattttaacccctaa-gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||   ||||||  |||| ||||||| | ||||||||||    
T  8875945 tgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaatttgcatatttggtccttttagtcaattttgac 8876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 47614236 - 47614347
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    ||||||||||  ||||  |||||||||||||| ||||||||||| |||||||| ||||| | ||||| |  |||||||||    |||| |||||||||||    
T  47614236 cccctaagtatcaaaacaacaattttggccccctaagatttagcctctttgcatctttggtgcttttggttaattttgacttattcaacgcctacgtggc 47614335  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  47614336 aggccacgtgtg 47614347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 31645024 - 31645110
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    ||||||||| |||||| |||||||||  || | |||||||||||   |||||| ||||| |||||||  ||||||||||||||||||    
T  31645024 cccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttgaccaattttgaccggtcaa 31645110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 34019211 - 34019117
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttga 152  Q
    ||||||||||||| ||||| || ||||||| | ||||||||||| ||| ||| ||||||||  |||||| ||||| ||||||| | |||||||||    
T  34019211 aacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatctttggtccttttggtcaattttga 34019117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 52839091 - 52839197
Alignment:
Q  77 ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgc 176  Q
    |||||||| ||||  ||||||||  |||  ||| |||||||  | |||||| ||| |||||||| | ||||||||||||||||| ||||| |||| ||||    
T  52839091 ctaagtaccaaaacaacaattttacccctctaaaatttagccccattgcaaatttcatccttttggtcaattttgaccggtcaaagcctatgtggtacgc 52839190  T
Q  177 cacgtgt 183  Q
    |||||||    
T  52839191 cacgtgt 52839197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 55191546 - 55191671
Alignment:
Q  59 aacttgcaattttaac-ccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| || |||||| |||||||| || ||||||  || || ||||||||||  |||||||| |||||||||||||  || |||||| | ||    
T  55191546 aacttgcaattttgacaccctaaatacaaaaactataattttc-cctctcaagatttagcccctttgcaattttgatcctttttatcacttttgatcagt 55191644  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||| ||||| | || ||||||||||||    
T  55191645 caaagcctatgcggtacgccacgtgtg 55191671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 40426820 - 40426748
Alignment:
Q  82 tacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||||||||||| || ||||||||| |||||   ||||| ||||||| |  ||||||||||    
T  40426820 tacaaaaattacaattttggccccctatgatttagctcctttgtgtctttggtccttttggttaattttgacc 40426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 47609732 - 47609828
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||| ||||  |||||||   |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  47609732 aacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 47609828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 47610630 - 47610550
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  47610630 cccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 47610550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 6170307 - 6170387
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||||||||| | |||| |||||||||||||||||||||   ||||||||||||||  || |||||| ||||||| ||||    
T  6170307 aacttgcaattttgatcccttaagtacaaaaattacaatttt--acccttaagatttagtctcattgcaaatttgatcatttt 6170387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 6171246 - 6171183
Alignment:
Q  121 tttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    |||||| ||||| ||||||| ||||||||||||   ||||||||||| ||||||||||| ||||    
T  6171246 tttgcatctttggtccttttggccaattttgactaatcaatgcctacttggcacgccacatgtg 6171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 12703550 - 12703507
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagc 117  Q
    |||||||||||||||| ||||||||||||||| || ||||||||    
T  12703550 cccctaagtacaaaaactacaattttggccccctatgatttagc 12703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 6250580 - 6250522
Alignment:
Q  121 tttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccac 179  Q
    |||||| |||||||||||||  |||||||||||   ||||||||||| |||||||||||    
T  6250580 tttgcatctttgatccttttgaccaattttgactaatcaatgcctacatggcacgccac 6250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 23769895 - 23769987
Alignment:
Q  62 ttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||| || ||| || |||||| |||||||||| ||||| ||||||| |||  |||||| ||||| ||||||| | |||||||||||    
T  23769895 ttgcaattttaatcctctatgtgcaaaaactacaattttgacccct-aagatttcgctcatttgcatctttggtccttttggtcaattttgacc 23769987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 29931277 - 29931318
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagattta 115  Q
    ||||||| |||||||| ||||||||||||||| |||||||||    
T  29931277 cccctaaatacaaaaactacaattttggccccctaagattta 29931318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 29980431 - 29980472
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagattta 115  Q
    ||||||| |||||||| ||||||||||||||| |||||||||    
T  29980431 cccctaaatacaaaaactacaattttggccccctaagattta 29980472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 46721283 - 46721190
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||| ||||||||||| || ||||||||| ||||||||| | ||| |||||||||||  |||||||  |||| ||||| | | |||||||||||    
T  46721283 ttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccctttgcatatttggtccttctggtcaattttgacc 46721190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 49401479 - 49401438
Alignment:
Q  133 atcctttttgccaattttgaccggtcaatgcctacgtggcac 174  Q
    |||||||||| |||||||||| | ||||||||||||||||||    
T  49401479 atcctttttgtcaattttgactgatcaatgcctacgtggcac 49401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 26722594 - 26722693
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggcacgccacgtgt 183  Q
    |||||| |||||||||| ||| || ||||||||  ||||||||   ||| |||||| |||||||||||||  ||||| ||||| |||||| |||||||||    
T  26722594 aaaaatgacaattttggtcccctatgatttagcccctttgcaatagtga-ccttttagccaattttgacctagtcaacgcctaagtggcatgccacgtgt 26722692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 49220532 - 49220492
Alignment:
Q  144 caattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  49220532 caattttgaccggtcaatgtctacgtggcttgccacgtgtg 49220492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 51470505 - 51470425
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| |  ||| |||||||||||| | ||||||||||| |||||||   |||||||||||    
T  51470505 cccctaagtaccaaaaccacaatttagcacccctaagatttagctccattgcaactttggtccttttgatcaattttgacc 51470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 26575120 - 26574999
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  26575120 aacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgcaactttgatcctttttgccaattttgaccggt 26575021  T
Q  158 caatgcctacgtggcacgccac 179  Q
    ||||| |||||||||| |||||    
T  26575020 caatgtctacgtggcatgccac 26574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 10785976 - 10785853
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||||| |||||||||||  |||||    
T  10785976 ttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatcctttttaccaattttgactagtcaa 10785877  T
Q  161 tgcctacgtggcacgccacgtgtg 184  Q
    ||| ||| ||||||||||||||||    
T  10785876 tgcatacatggcacgccacgtgtg 10785853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 1829669 - 1829543
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| |||||| ||||| ||||||||||||||| |||||||||||  ||||||| ||||| || |||| | ||||||||||||||    
T  1829669 aacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgcatctttggtcattttggtcaattttgaccggt 1829570  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||||| |||||||||    
T  1829569 caatgcctacgtggcacaccacgtgtg 1829543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 10784628 - 10784755
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcc-tttttgccaattttgaccgg 156  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||  ||||||||||  ||||||||||||||||| |||||  |||||||||||||    
T  10784628 aacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccctttgcaactttgatccttttttatcaattttgaccgg 10784727  T
Q  157 tcaatgcctacgtggcacgccacgtgtg 184  Q
    | |||||||||| ||||||||| |||||    
T  10784728 ttaatgcctacggggcacgccatgtgtg 10784755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 16704563 - 16704440
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||  || |||||||||||| ||||||||||| |||||||||||| |||||||||  |||    
T  16704563 aacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctctttgcaactatgatcctttttgtcaattttgattggt 16704464  T
Q  158 caatgcctacgtggcacgccacgt 181  Q
    |||||||||||||| | |||||||    
T  16704463 caatgcctacgtggtatgccacgt 16704440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 14823641 - 14823515
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||| ||||| ||||||| ||| ||||||||||||||| ||||||||||   | ||||||| || || ||||| | ||||||||||||||    
T  14823641 aacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttagaaccgttgcaaccttaattcttttggtcaattttgaccggt 14823542  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||||||||||||||    
T  14823541 caatgcctacgtggcacgccacgtgtg 14823515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 14822395 - 14822521
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  |||| |||||| | ||| ||||||||||||||| ||||||||||  || |||||||||| ||||||||   | ||||||||||||    
T  14822395 aacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttagtctcattgcaactttaatccttttaatctattttgaccggt 14822494  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||| ||||||||||||||||||||    
T  14822495 caatgcttacgtggcacgccacgtgtg 14822521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 26574654 - 26574765
Alignment:
Q  59 aacttgcaatttt-aacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||  |||||||||||||||  |||||||||||||||| |||||| |||||||||||| |    
T  26574654 aacttgcaattttgaacctctaagtacaaaaactaca-ttttgatcccttaagatttagcccctttgcaactttgatcttttttgtcaattttgaccgat 26574752  T
Q  158 caatgcctacgtg 170  Q
     ||||||||||||    
T  26574753 taatgcctacgtg 26574765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 8660269 - 8660174
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| |||||||||||| ||||  ||||||| | |||| |||||||||||| | |||||||||||||||||||  ||||||||||||    
T  8660269 aacttgcaattttgacccctaagtaccaaaaccacaatttagcccccctaagatttagctccattgcaactttgatccttttgaccaattttgacc 8660174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 29473137 - 29473238
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtg 182  Q
    |||||||| |||||||||||||   |||| || ||  |||||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||    
T  29473137 acaaaaataacaattttggccctccaagaattggcccctttgcaattttgatcctttttgtcaatttttaccggtcaatgcctacgtggcatgccacatg 29473236  T
Q  183 tg 184  Q
    ||    
T  29473237 tg 29473238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 27437890 - 27437959
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||| |||||||||| |||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  27437890 aaaaactacaattttgaccccctaagatttagctcctttgcaactttggtccttttggccaattttgacc 27437959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 75 - 154
Target Start/End: Original strand, 5658808 - 5658887
Alignment:
Q  75 ccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||| ||||||||| ||||||||||  |||||||||||||||   |||||||||||||||||||| | |||||||||||    
T  5658808 ccctatgtacaaaaactacaattttgatcccttaagatttagcccatttgcaactttgatccttttggtcaattttgacc 5658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 7314915 - 7315041
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggt 157  Q
    |||||||||||||  ||||||||||  ||||  ||||||||| |||| |||||||||||  ||||||| ||||| || |||| | ||||||||||    |    
T  7314915 aacttgcaattttggcccctaagtatcaaaacaacaattttgaccccctaagatttagcccctttgcatctttggtcattttggtcaattttgacttatt 7315014  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||| |||||||||||| ||||||||||    
T  7315015 caacgcctacgtggcaggccacgtgtg 7315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 7316326 - 7316233
Alignment:
Q  92 acaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||||||||||||||  ||||||| || || ||||||| | ||||||||||    |||| |||||||||||| ||||||||||    
T  7316326 acaattttggccccttaagatttagcccctttgcatctatggtccttttggtcaattttgacttattcaacgcctacgtggcaagccacgtgtg 7316233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 26717144 - 26717083
Alignment:
Q  93 caattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||   |||||||||||    
T  26717144 caattttgaccccttaagatttagctcttttgcaactttgatccttttgatcaattttgacc 26717083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 3721647 - 3721743
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||| ||||  | ||||| | ||||||||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  3721647 aacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagccccattgcaactttggtccttttgaccaattttgacc 3721743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 17496832 - 17496928
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttgg-ccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||| |||||||||||| ||||||||||||| | ||||||||| |||| ||||||||| | |||||||| ||||| |||||||   ||||||||||    
T  17496832 aacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgcatctttggtccttttgatcaattttgac 17496928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 6842333 - 6842253
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||| || |||||| ||||||||| |  |||||| ||||||  | |||||| ||||||||||||| |||||||||||||    
T  6842333 cccctatgtgcaaaaactacaattttagttccttaaaatttagtctgtttgcatctttgatccttttggccaattttgacc 6842253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 8659316 - 8659396
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  8659316 cccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 8659396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 10785744 - 10785712
Alignment:
Q  286 ttcatcttatcattccaaatccaatccagattc 318  Q
    |||||||||||||||||||||||||||||||||    
T  10785744 ttcatcttatcattccaaatccaatccagattc 10785712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 3333076 - 3333010
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    |||||| ||||||||| |||||||||  |||  ||| |||||||  |||||||||||||||||||||    
T  3333076 cccctatgtacaaaaactacaattttaaccctctaaaatttagcccctttgcaactttgatcctttt 3333010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 3333566 - 3333496
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||| |||||||||  |||  || ||||||||  ||| ||||||||||||||||| ||||||||||||    
T  3333566 acaaaaactacaattttaaccctctatgatttagccccttcgcaactttgatccttttggccaattttgac 3333496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 8821924 - 8821990
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||| | ||||||||||| |||||||    
T  8821924 cccctaagtaccaaaaccacaatttagcccccctaagatttagctccattgcaactttggtcctttt 8821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 12350833 - 12350891
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagc 117  Q
    ||||||||||||| ||||||| ||| ||||| |||||||||  |||| |||||||||||    
T  12350833 aacttgcaattttgacccctatgtataaaaactacaattttaaccccctaagatttagc 12350891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 16703603 - 16703685
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatccttttt 141  Q
    ||||||||||||| | || ||| |||||||| ||||||||| ||||| ||| ||||| |  |||  |||||||||||||||||    
T  16703603 aacttgcaattttgatccataaatacaaaaactacaattttagccccctaaaatttaaccccttcccaactttgatccttttt 16703685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 30495761 - 30495704
Alignment:
Q  62 ttgcaattttaa-cccctaagtacaaaaattacaattttggcccct-taagatttagc 117  Q
    |||| ||||||| |||||| |||||||||| ||||||||||||||| |||||||||||    
T  30495761 ttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagc 30495704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 34830953 - 34831033
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| ||| |||  ||||||||||||    
T  34830953 cccctaagtaccaaaaccacaatttagcccccctaagatttagccacattgcaactttggtccctttgaccaattttgacc 34831033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 34834645 - 34834549
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| | | ||||||||  ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  34834645 aacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 34834549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 44412035 - 44411906
Alignment:
Q  56 cttaacttgcaattttaa-cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||||  |||||||||||||||| |||||||||  ||| |||||||||||   |||||||||||||||||||||||||||||||||||    
T  44412035 cttaacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattttgacc 44411936  T
Q  155 ggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||||||||||||||||||    
T  44411935 ggtcaatgcctacgtggcacgccacgtgtg 44411906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 44411815 - 44411733
Alignment:
Q  268 tcaaatcttgatcttcatttcatcttatcattccaaatccaatccagattctttttgcatacttggtattgaactatctgagt 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44411815 tcaaatcttgatcttcatttcatcttatcattccaaatccaatccagattctttttgcatacttggtattgaactatctgagt 44411733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 39699834 - 39699707
Alignment:
Q  58 taacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccgg 156  Q
    |||||||||||||| ||||| |||||||| ||| ||||||||||||||| |||||||||||  | |||||||||| |||||||| | |||||||||||||    
T  39699834 taacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccattgcaactttaatccttttggtcaattttgaccgg 39699735  T
Q  157 tcaatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||||||||| |||||    
T  39699734 tcaatgcctacgtggcacgccatgtgtg 39699707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 44404493 - 44404603
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||||||| || |||||||||||| ||| |||||||   |||||| ||||| || |||| | ||||||||||||||||||||||||||||||    
T  44404493 cccctaagtacaaaaactataattttggccccctaaaatttagccaatttgcatctttggtcattttggtcaattttgaccggtcaatgcctacgtggca 44404592  T
Q  174 cgccacgtgtg 184  Q
    |||||||||||    
T  44404593 cgccacgtgtg 44404603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 45150037 - 45149910
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggcccct-taagatttagcttctttgcaactttgatcctttttgccaattttgaccgg 156  Q
    |||||||||||||  ||||| |||||||||||  ||||||||| ||||  |||||||||||  ||||||| ||||||||||||| |||||||||||||||    
T  45150037 aacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgcatctttgatccttttggccaattttgaccgg 45149938  T
Q  157 tcaatgcctacgtggcacgccacgtgtg 184  Q
    |||| |||||||||| | ||||||||||    
T  45149937 tcaaagcctacgtggaatgccacgtgtg 45149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 14999319 - 14999442
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||  ||  ||   |||||||  | |||||||||||||||||||| ||||||||||||||    
T  14999319 aacttgcaattttgaccccctaagtacaaaaactacaattttgatcctcta---tttagctcatctgcaactttgatcctttttgtcaattttgaccggt 14999415  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| |||| |||||    
T  14999416 caatgcctacgtggcatgccatgtgtg 14999442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 39153182 - 39153056
Alignment:
Q  59 aacttgcaattttaacccctaa-gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  ||||| | ||||||||| |||||||||| |||  ||||||||| |  ||||||| ||||| ||||||| | ||||||||||| ||    
T  39153182 aacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgaccagt 39153083  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| ||||||||||    
T  39153082 caatgcctacgtggcatgccacgtgtg 39153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 45148632 - 45148741
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||| ||||| |||||||||| |||| ||||||||| |  ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  45148632 cccctaagta-aaaaactacaattttgcccccctaagatttaacccctttgcatctttggtccttttggccaattttgaccggtcaaagcctacgtggca 45148730  T
Q  174 cgccacgtgtg 184  Q
     ||||| ||||    
T  45148731 tgccacatgtg 45148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 24422835 - 24422930
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||  | |||||| |||||||||||| | ||||||||||    
T  24422835 aacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccattgcaaatttgatccttttggtcaattttgac 24422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 52275003 - 52275098
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||| ||| ||||||||||| || |||||| |||||||||||| | ||||||||||    
T  52275003 aacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcctcattgcaaatttgatccttttggtcaattttgac 52275098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 39151982 - 39152092
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||||||||| |||||||||| | | |||||||||| |  ||||||| ||||| ||||||| | ||||||||||| ||||||||||||||||||    
T  39151982 cccctatgtacaaaaactacaattttgactctttaagatttaacccctttgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtggca 39152081  T
Q  174 cgccacgtgtg 184  Q
     ||||| ||||    
T  39152082 tgccacatgtg 39152092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 39698614 - 39698715
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||| ||| || |||||||||| || |||||||||| || |||||||||| |||||||| | |||||||||||||||||| ||||| |||||    
T  39698614 cccctaagtacagaaactataattttggccact-aagatttagcctcgttgcaactttaatccttttggtcaattttgaccggtcaatacctacatggca 39698712  T
Q  174 cgc 176  Q
    |||    
T  39698713 cgc 39698715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 15000021 - 14999901
Alignment:
Q  59 aacttgcaattttaa-cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| | |||||||||||||||  ||||||  || || | ||| ||||||    |||||||||||||||||||||| ||||||||||| ||    
T  15000021 aacttgcaattttgatcccctaagtacaaaatctacaatcatgaccacctaaaatttagtccatttgcaactttgatcctttttgtcaattttgacctgt 14999922  T
Q  158 caatgcctacgtggcacgcca 178  Q
    |||||||||||||||| ||||    
T  14999921 caatgcctacgtggcatgcca 14999901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 45157259 - 45157163
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtg 170  Q
    |||||| ||||||||| |||||||||| ||| |||||||||| |  ||||||| ||||| ||||||| | ||||||||||| |||||||||||||||    
T  45157259 cccctatgtacaaaaactacaattttgaccctttaagatttaacccctttgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtg 45157163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 36613954 - 36613843
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    |||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||||  |||||||   ||||||||||    |||| |||||||||||    
T  36613954 cccctaagtacaaaaactacaattttgaccccctaagatttagcctctttgcaactttagtccttttgatcaattttgacttattcaacgcctacgtggc 36613855  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  36613854 aggccacgtgtg 36613843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 40384778 - 40384874
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggc 172  Q
    |||| ||||||||| ||||||||||  ||| ||| ||||||| |||||||| ||||| ||||||| |||||||||||||| |||||| ||| |||||    
T  40384778 cctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggccaattttgaccgatcaatgtctatgtggc 40384874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 43060065 - 43059977
Alignment:
Q  66 aattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||| |||||| ||||||||||| |||||||||| |||||||||||||||||  |||||| ||||| ||||||| | ||||||||||    
T  43060065 aattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcatttgcatctttggtccttttggtcaattttgac 43059977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 51684417 - 51684497
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||| ||| ||||| ||||||||||||||| |||||||||||  ||||||| ||||| ||||||| |||||||||||||    
T  51684417 cccctatgtataaaaactacaattttggccccctaagatttagcccctttgcatctttggtccttttggccaattttgacc 51684497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 43058820 - 43058915
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| ||||  |||||||||||  |||| || ||||||||||||| | ||||||||||    
T  43058820 aacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttacatctttgatccttttggtcaattttgac 43058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 43378763 - 43378652
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggc 172  Q
    ||||||||||||||||||||||||||| || | |||||||||||  ||||||| |||| |||||||| | | |||||||||  ||||| || || |||||    
T  43378763 cccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgcatctttaatccttttggtcgattttgaccaagtcaacgcatatgtggc 43378664  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  43378663 atgccacgtgtg 43378652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 11437245 - 11437139
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcacgc 176  Q
    |||||||||||| ||||||||||||||| ||||||||| |   ||| || ||||||||||||| | |||||||||||| ||||| || || |||||| ||    
T  11437245 taagtacaaaaactacaattttggccccctaagatttaacccttttacatctttgatccttttggtcaattttgaccgagtcaacgcttaagtggcatgc 11437146  T
Q  177 cacgtgt 183  Q
    |||||||    
T  11437145 cacgtgt 11437139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 35594252 - 35594345
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| |||||||||||  |||| |||||||||| |||| ||| |||||||  ||||||| ||||| ||||||| ||||||||||||    
T  35594252 aacttgcaattttgacccctaagtattaaaactacaattttgacccc-taaaatttagcccctttgcatctttggtccttttagccaattttgac 35594345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 31194111 - 31194183
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||| || ||||||||||| |||||||||||| | |||||| ||||| ||||||||||||||| ||||    
T  31194111 gtacaaaaactaaaattttggccctttaagatttagcctttttgcatctttggtcctttttgccaattctgac 31194183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 44407361 - 44407408
Alignment:
Q  271 aatcttgatcttcatttcatcttatcattccaaatccaatccagattc 318  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  44407361 aatcttcatcttcattttatcttatcattccaaatccaatccagattc 44407408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 44410711 - 44410665
Alignment:
Q  343 atctgagttatggttgtcgttatttgttttttgttctctttgatgat 389  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  44410711 atctgagttatggttgtcattatttgttttttgttctctttgttgat 44410665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 51685808 - 51685739
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaatttt 150  Q
    ||||||||| |||||||||| |||| |||||||||||  ||||||| ||||| ||||||| |||||||||    
T  51685808 gtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttggtccttttggccaatttt 51685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 24426125 - 24426045
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||| ||||||||| | ||| |||||||||||  | |||||| |||||| ||||| | |||||||||||    
T  24426125 cccctaagtacaaaaactacaattttagtcccctaagatttagccccattgcaaatttgatacttttggtcaattttgacc 24426045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 33088120 - 33088228
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacg 175  Q
    ||||| || ||||| |||||||||   |||||||||||||||   |||||  ||||  ||||||| ||||||||| ||||||||| |||||||||| |||    
T  33088120 cctaaatataaaaactacaattttattcccttaagatttagcccatttgcttctttagtccttttggccaattttaaccggtcaaagcctacgtggtacg 33088219  T
Q  176 ccacgtgtg 184  Q
    || ||||||    
T  33088220 ccgcgtgtg 33088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 11436097 - 11436204
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcacgc 176  Q
    |||||| ||||| ||||||||||||||| ||||||||| |   |||||| ||||| | ||||| | |||||||||||| ||||| ||||| |||||| ||    
T  11436097 taagtataaaaactacaattttggccccctaagatttaacccatttgcatctttggttcttttggtcaattttgaccgagtcaacgcctaagtggcatgc 11436196  T
Q  177 cacgtgtg 184  Q
    ||| ||||    
T  11436197 cacatgtg 11436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 25652749 - 25652844
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| | |||| |||||||||||||| || ||||||||  |||||||||||   |||||| ||||| || |||| ||||||||||||    
T  25652749 aacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccatttgcatctttggtcattttggccaattttgac 25652844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 33088683 - 33088609
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttg 132  Q
    ||||||||||||| |||| | ||||||||||| |||||||||| | || |||||||||||  |||||||||||||    
T  33088683 aacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccctttgcaactttg 33088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 30249533 - 30249461
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||| |||||||||| |||||||||||||||||  |||| | |||||||| ||||   ||||||||||    
T  30249533 gtacaaaaactacaattttgaccccttaagatttagctcatttgtatctttgatctttttgatcaattttgac 30249461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 43377775 - 43377851
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||| |||||||| |||||||||| | ||| ||||||  ||||| || ||||||||||||| | |||||||||||    
T  43377775 taagtataaaaattataattttggcctcctaaaatttagtctctttacacctttgatccttttggtcaattttgacc 43377851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 52827382 - 52827478
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||| ||||  |||||||   |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  52827382 aacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 52827478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 52828136 - 52828040
Alignment:
Q  59 aacttgcaattttaac-ccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||  | |||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  52828136 aacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 52828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 2940325 - 2940396
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||| |||||||||  ||| ||||||||| | ||||||||| |||||||||||| |  ||||||||||    
T  2940325 acaaaaataacaattttgatcccctaagatttaacctctttgcaattttgatccttttagttaattttgacc 2940396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 50680382 - 50680461
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||| ||||| || |||||| | ||| ||||||||| |  ||||||| ||||||||||||| | ||||||||||    
T  50680382 cccctaagtataaaaactataattttagtcccctaagatttaacccctttgcatctttgatccttttggtcaattttgac 50680461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 7675525 - 7675451
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttg 132  Q
    |||||||||||||  || |||||||| |||||||| ||||||| |||| |||||||||||  ||||||| |||||    
T  7675525 aacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgcatctttg 7675451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 35595223 - 35595162
Alignment:
Q  92 acaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||||| ||||||||||  ||||||| ||||| ||||||| | |||||||||||    
T  35595223 acaattttggcccct-aagatttagcccctttgcatctttggtccttttggtcaattttgacc 35595162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 30248170 - 30248241
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||| |||||||||  || || |||||||| || ||||||| |||||||| |||| ||||||||||||    
T  30248170 gtacaaaaactacaattttaccctct-aagatttaactcctttgcatctttgatcattttggccaattttgac 30248241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 52276213 - 52276133
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||| || || ||| | ||| |||||||||||  | |||||| ||||||||||||   |||||||||||    
T  52276213 cccctaagtacaaaaactataaatttagtcccctaagatttagccccattgcaaatttgatccttttgatcaattttgacc 52276133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 28539886 - 28539760
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  28539886 aacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgcaactttgatcctttttgccaattttgaccggt 28539787  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| ||||||||||    
T  28539786 caatgcctacgtggcatgccacgtgtg 28539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 36486554 - 36486428
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||| ||| ||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  36486554 aacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctttgcaactttgatcctttttgtcaattttgaccggt 36486455  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| ||||||||||    
T  36486454 caatgcctacgtggcatgccacgtgtg 36486428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 28538711 - 28538837
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| |||||| ||||||||||| ||||||||| ||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  28538711 aacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccctttgcaactttgatcctttttgtcaattttgaccggt 28538810  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||||| ||| |||||| ||||||||||    
T  28538811 caatgtctatgtggcatgccacgtgtg 28538837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 33160352 - 33160227
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||| |||| |||||| | ||| |||||||||| ||||||||||||||||  | |||||||||| |||||||| ||||||||||||||||    
T  33160352 aacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagcc-cattgcaactttaatccttttagccaattttgaccggt 33160254  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||||||||| ||||    
T  33160253 caatgcctacgtggcacgccacatgtg 33160227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 1797338 - 1797237
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtg 182  Q
    ||||||| ||||||||||| |||||||||||||||  ||||||||||||||| | ||||  ||||||||||||||||||||||| |||||||||||| ||    
T  1797338 acaaaaactacaattttggtcccttaagatttagcccctttgcaactttgattccttttttcaattttgaccggtcaatgcctatgtggcacgccacatg 1797239  T
Q  183 tg 184  Q
    ||    
T  1797238 tg 1797237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 36485355 - 36485457
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgcc 177  Q
    |||||||||||| || |||||||||||| ||||||||| |  |||||||||||||||| |||||| |||||||||||||||||||||||  ||||| |||    
T  36485355 taagtacaaaaactataattttggccccctaagatttaacccctttgcaactttgatcatttttgtcaattttgaccggtcaatgcctatatggcatgcc 36485454  T
Q  178 acg 180  Q
    |||    
T  36485455 acg 36485457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 24332948 - 24333074
Alignment:
Q  59 aacttgcaattttaacccctaa-gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  ||||| | ||||||||| |||||||||| |||  ||||||||| |  ||||||| ||||| ||||||| | ||||||||||| ||    
T  24332948 aacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgaccagt 24333047  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||| ||||||||||    
T  24333048 caatgcctacgtggcatgccacgtgtg 24333074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 40255738 - 40255612
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| ||| |||| ||| ||||||||||||||| ||||||||| |  | |||||| ||| ||| ||||   ||||||||||||||    
T  40255738 aacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccccattgcaattttaatctttttgatcaattttgaccggt 40255639  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||||||  ||||||||||    
T  40255638 caatgcctacgtggcgtgccacgtgtg 40255612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 25523104 - 25523186
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    |||||||||||||| |||| |||||||||||| |||||||||| |||| |||||||||||  ||||||| |||||||||||||    
T  25523104 aacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccctttgcatctttgatcctttt 25523186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 19752962 - 19753073
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    |||||||||||||||| ||||||||||||||| || ||||||||  | ||||| ||||| ||||||| | ||||||||||    |||| |||||||||||    
T  19752962 cccctaagtacaaaaactacaattttggccccctatgatttagccccattgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggc 19753061  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  19753062 aggccacgtgtg 19753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 22940672 - 22940563
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggc 172  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||  |||| || |||| |||||||| | |||||||||||  ||||| ||||| |||||    
T  22940672 cccctaagtacaaaaattacaattttgacccc-taaaatttagccccttttcatcttttatccttttggtcaattttgaccaagtcaacgcctaagtggc 22940574  T
Q  173 acgccacgtgt 183  Q
    | |||||||||    
T  22940573 atgccacgtgt 22940563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 16650043 - 16650154
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggc 172  Q
    |||||||||||||||| |||||||||| |||  ||||||||| |  ||||||| ||||| ||||||| | |||||||||||  |||||||| |  |||||    
T  16650043 cccctaagtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgaccaagtcaatgcatgtgtggc 16650142  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  16650143 atgccacgtgtg 16650154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 18486952 - 18486841
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    |||||||||| | |||  |||||||||||||| |||||||||||  ||||||| ||||| ||||||| | ||||||||||    |||| |||||||||||    
T  18486952 cccctaagtatagaaaccacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggc 18486853  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  18486852 aggccacgtgtg 18486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 21835091 - 21835157
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    |||||| ||||||||| |||||||||| |||| ||||||||| |  |||||||||||||||||||||    
T  21835091 cccctatgtacaaaaactacaattttgaccccctaagatttaacccctttgcaactttgatcctttt 21835157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 42195183 - 42195263
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||| ||||||||  ||||||||||| ||| |||||||||||  ||||||| ||||| ||||||| | |||||||||||    
T  42195183 cccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgcatctttggtccttttggtcaattttgacc 42195263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 33158133 - 33158188
Alignment:
Q  59 aacttgcaattttaac-ccctaagtacaaaaattacaattttggccccttaagatt 113  Q
    ||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  33158133 aacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 18154529 - 18154609
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||| ||||||| ||||||||||||||||| ||||||||| ||||  ||| |||||||| | |||||| ||||||| ||||    
T  18154529 aacttacaattttgacccctaagtacaaaaactacaatttt-gccctctaaaatttagctccattgcaaatttgatcatttt 18154609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 18485218 - 18485307
Alignment:
Q  96 ttttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||| |||||||||||  ||||||| ||||||||||||| |  |||||||||    |||| |||||||||||| ||||||||||    
T  18485218 ttttggccccctaagatttagcccctttgcatctttgatccttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtg 18485307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 25524146 - 25524069
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||| || ||||||| |||| |||||||||||  ||||||| ||||  ||||||| | ||||||||||    
T  25524146 cctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattttgac 25524069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 5778886 - 5778806
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  5778886 cccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 5778806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 25055449 - 25055529
Alignment:
Q  61 cttgcaattttaa-cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||||||| | |||||| ||| ||||| ||||||||||||||| |||||||||||   |||||| ||||| |||||||    
T  25055449 cttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccatttgcatctttggtcctttt 25055529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 1016906 - 1016804
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacg 180  Q
    ||||||||| |||||||||| | ||| |||| |||||| |||||||   ||| || ||||  |||||||||| |||||||||||||||| ||| | ||||    
T  1016906 gtacaaaaactacaattttgactcct-aagaattagctcctttgcatagttggtcattttccccaattttgatcggtcaatgcctacgtagcatgtcacg 1016808  T
Q  181 tgtg 184  Q
    ||||    
T  1016807 tgtg 1016804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 5961476 - 5961567
Alignment:
Q  93 caattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||| ||||| ||| ||||| |  ||||||| |||||||||||||  ||| |||| ||||||||||| |||| || || ||||||||||    
T  5961476 caattttagccccctaaaatttaacccctttgcatctttgatccttttgaccatttttaaccggtcaatgtctacatgacatgccacgtgtg 5961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 19754180 - 19754101
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||| |||||||| ||||||||||||||| || ||||||||  | ||||| ||||| |||||||   ||||||||||    
T  19754180 cccctaaatacaaaaactacaattttggccccctatgatttagccccattgcatctttggtccttttgaacaattttgac 19754101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 5777934 - 5778016
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||    
T  5777934 aacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtcctttt 5778016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 16788788 - 16788694
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccg-gtcaatgcctacgtggcacgcca 178  Q
    ||||| || |||||| |||| |||||||||||| |||||||||   || ||||||||| |||||||||| | |||||  ||||||||||| ||||    
T  16788788 aaaaaatataattttagccctttaagatttagcatctttgcaatagtggtcctttttgtcaattttgactgagtcaactcctacgtggcatgcca 16788694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 17825536 - 17825581
Alignment:
Q  62 ttgcaattttaacccctaagtacaaaaattacaattttggcccctt 107  Q
    |||||||||| ||||| || || |||||||||||||||||||||||    
T  17825536 ttgcaattttgacccccaattagaaaaattacaattttggcccctt 17825581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 14061650 - 14061555
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgt 181  Q
    |||||||| |||||||| | || |||||||||||  ||||||  ||||||||||||  | |||||| || |||||| ||||| |||||| |||||||    
T  14061650 aaaaattataattttggtctct-aagatttagctcatttgcatttttgatccttttgacaaatttttactggtcaacgcctatgtggcatgccacgt 14061555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 25056447 - 25056351
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttc-tttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| ||||| ||||||  |||| |||||||||| |||| ||||||||||| || ||| || ||||| |  |||| ||||||||||||    
T  25056447 aacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcctcatttacatctttggttgttttagccaattttgac 25056351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 22587559 - 22587661
Alignment:
Q  82 tacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgt 181  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||||||| ||||| |||||||    
T  22587559 tacaaaaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaattttgaccagtcaatgcctacatggcatgccacgt 22587658  T
Q  182 gtg 184  Q
    |||    
T  22587659 gtg 22587661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 22588019 - 22587894
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtc 158  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||  ||||||| ||||| ||||||| |||||||| |||| |||    
T  22588019 aacttgcaattttggcccctatgtacaaaaactacaattttggccccttaagatttagcccctttgcatctttggtccttttggccaatttcgaccagtc 22587920  T
Q  159 aatgcctacgtggcacgccacgtgtg 184  Q
    || | ||| |||||| ||||||||||    
T  22587919 aacgtctatgtggcatgccacgtgtg 22587894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 36450971 - 36450872
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||| ||| |||||||| ||||||  |||| |||||| |||||||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  36450971 cccctaagtacagaaactacaatttcggccccccaagaattagctcctttgcaattttgatccttttggccaattttgactggtcaatgcctacgtggca 36450872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 7899932 - 7899822
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||| ||| ||||||||| ||||| |||||||||||  | ||| |||||| ||| |||| | |||||||||||||||||||| |||||||||    
T  7899932 cccctaagtacagaaactacaattttagccccctaagatttagccccattgtaactttaatctttttggtcaattttgaccggtcaatgcatacgtggca 7899833  T
Q  174 cgccacgtgtg 184  Q
    |||||||||||    
T  7899832 cgccacgtgtg 7899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 36449829 - 36449939
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||||||| |||||||||| ||||  |||| ||||   |||||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  36449829 cccctaagtacaaaaactacaattttgcccccccaagaattaggccctttgcaattttgatccttttgaccaattttgaccggtcaatgcctacgtggca 36449928  T
Q  174 cgccacgtgtg 184  Q
     |||| |||||    
T  36449929 tgccatgtgtg 36449939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 38840559 - 38840433
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||| |||| |||||||||||| ||||||||| ||||| |||||||||||  | |||||| ||| ||||||||   ||||||||||||||    
T  38840559 aacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagccccattgcaattttaatccttttgatcaattttgaccggt 38840460  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||| |||  ||||||||||    
T  38840459 caatgcctacgcggcgtgccacgtgtg 38840433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 13570623 - 13570499
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||||  |||| ||||||||||| || |||||||| |||  |||| ||||   |||| |||||||||||||||||||||||||||| ||||    
T  13570623 aacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattagtccctttacaactttgatcctttttgccaattttgagcggt 13570524  T
Q  158 caatgcctacgtggcacgccacgtg 182  Q
    |||| |||| |||||||||||||||    
T  13570523 caattcctatgtggcacgccacgtg 13570499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 41878145 - 41878245
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||| ||| |||||||||||||||||||||||||||  | |||||| ||| ||| |||| | ||||||||||||||||||| ||||||||||    
T  41878145 cccctaagtacagaaactacaattttggccccttaagatttagccccattgcaattttaatctttttggtcaattttgaccggtcaatg-ctacgtggca 41878243  T
Q  174 cg 175  Q
    ||    
T  41878244 cg 41878245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 7898726 - 7898852
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||  || |||||||| | ||| ||||||||||||||| |||||||||||  | |||||| ||| ||||||||   ||||||||||| ||    
T  7898726 aacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgcaattttaatccttttgatcaattttgaccagt 7898825  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||| ||||||||| ||||||||||    
T  7898826 caatgcttacgtggcatgccacgtgtg 7898852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 11257657 - 11257783
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggt 157  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||| ||||||||||||   ||||||||||   ||    
T  11257657 aacttgcaattttaaaccctaagtataaaaactacaattttggcctcctaagatttagccccattgcaaatttgatccttttgatcaattttgacatagt 11257756  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||| |||| ||||||| ||||||||||    
T  11257757 caacgcctgcgtggcatgccacgtgtg 11257783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 38839277 - 38839391
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||| |||||||||||  | |||||| ||| ||| |||| | ||||||||||| ||    
T  38839277 aacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccattgcaattttaatcattttggtcaattttgacccgt 38839376  T
Q  158 caatgcctacgtggc 172  Q
    |||||| ||||||||    
T  38839377 caatgcttacgtggc 38839391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 13030325 - 13030419
Alignment:
Q  59 aacttgcaattttaacccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||| ||||||  |||||||||||||||||||||||||| ||||| ||||||||||||  |||||| ||||| || |||| | ||||||||||    
T  13030325 aacttgtaattttggcccctaagtacaaaaattacaatttttgccccctaagatttagctcttttgcatctttggtcattttggtcaattttgac 13030419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 32739710 - 32739812
Alignment:
Q  82 tacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgt 181  Q
    |||||||| ||||||||||||||||||||||||||    ||| || ||||| ||| ||| ||||||||||||||||||| |||||| | |||| ||||||    
T  32739710 tacaaaaactacaattttggccccttaagatttagtcattttccatctttggtccatttggccaattttgaccggtcaacgcctacatcgcacaccacgt 32739809  T
Q  182 gtg 184  Q
    |||    
T  32739810 gtg 32739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 18797282 - 18797377
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| |||||| |||||  |||| |||||||||| |||| ||| |||||||  ||||||| ||||| ||||||| ||||||||||||    
T  18797282 aacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccctttgcatctttggtccttttagccaattttgac 18797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 22848242 - 22848353
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    ||||||| |||||||| |||||||||||| || |||||||||||  ||||||| ||||| |||||||   ||||||||||    |||| |||||||||||    
T  22848242 cccctaaatacaaaaactacaattttggctccctaagatttagcccctttgcagctttggtccttttgatcaattttgacttattcaacgcctacgtggc 22848341  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  22848342 aagccacgtgtg 22848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 1410060 - 1410130
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||| |||||||||| ||| ||||||||||| | ||||||||||| |||||||||| ||| ||||||    
T  1410060 acaaaaatgacaattttggtcccctaagatttagcctatttgcaactttaatcctttttgtcaactttgac 1410130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 18299426 - 18299504
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||| ||||| ||||||||||||||| || ||||||||   |||||| ||||||||||||| | |||||||||||    
T  18299426 cctaagtataaaaactacaattttggccccctatgatttagcccttttgcatctttgatccttttggtcaattttgacc 18299504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 41879262 - 41879152
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||| ||| |||||||||  |||| ||| |||||||  | |||||| ||| ||| ||||   ||||||||||| |||||||||||||||||     
T  41879262 cccctaagtacataaactacaattttaaccccctaaaatttagcaccattgcaattttaatcattttgatcaattttgaccagtcaatgcctacgtggcg 41879163  T
Q  174 cgccacgtgtg 184  Q
     ||||||||||    
T  41879162 tgccacgtgtg 41879152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 11938836 - 11938760
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||||| | ||||||| |||| ||||| ||||||  ||||||| ||||||| |||||||||||||||||    
T  11938836 cctaagtacaaaaat-ataattttgcccccctaagaattagctcttttgcaattttgatcatttttgccaattttgac 11938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 11258861 - 11258781
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||||| ||||||||| | ||| |||||||||||  | |||||  |||||||||||| | |||||||||||    
T  11258861 cccctaagtacaaaaactacaattttagtcccctaagatttagccccattgcagatttgatccttttggtcaattttgacc 11258781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 24475275 - 24475355
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||| ||||| ||||||||||||||| ||  ||||||||  |||||| ||||| ||||||| | |||||||||||    
T  24475275 cccctaagtataaaaactacaattttggccccctataatttagctcatttgcatctttggtccttttggtcaattttgacc 24475355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 18906053 - 18905959
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||| |||| |||||||||||| ||||||||| ||||| ||||||||||||  |||||| ||||| || ||||   ||||||||||    
T  18906053 aacttgcaattttagccccctaagtacaaaaactacaattttagcccc-taagatttagctcatttgcatctttggtctttttgatcaattttgac 18905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 18300790 - 18300697
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttga 152  Q
    ||||||||||||| ||||| |||||||||||| |||||||||| |||| ||  |||||||  ||||||| ||||| ||||||| | |||||||||    
T  18300790 aacttgcaattttgaccccctaagtacaaaaactacaattttgacccc-tataatttagcccctttgcatctttggtccttttggacaattttga 18300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 23869585 - 23869519
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    ||||||| |||||||| ||||||||| || || |||||||||||  ||||||| |||||||||||||    
T  23869585 cccctaaatacaaaaactacaattttagctccctaagatttagcccctttgcatctttgatcctttt 23869519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 22067823 - 22067753
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||| ||||||||| ||||| ||  ||||| | |||| ||||||||||||||||| | ||||||||||    
T  22067823 acaaaaactacaattttagccccctataatttaccctcttcgcaactttgatccttttggtcaattttgac 22067753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 26545584 - 26545491
Alignment:
Q  62 ttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||| |||||| || ||||||||||| ||||||| |||  |||||||||||  ||||||| ||||| || ||||   |||||||||||    
T  26545584 ttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaattttgacc 26545491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 18904422 - 18904494
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaatttt 150  Q
    |||||||||||| |||||||||||  || ||||| |||||  |||| || ||||| ||||||| |||||||||    
T  18904422 taagtacaaaaactacaattttggttccctaagaattagcccctttacatctttggtccttttggccaatttt 18904494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 3374 - 3248
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||| ||||||| ||||| || ||||||||| || |||||||| ||| |||||||||||  ||||||||||||||||||||||||||||||| || |||    
T  3374 aacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccctttgcaactttgatcctttttgccaatttttactggt 3275  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    |||||||||||| ||| ||||| ||||    
T  3274 caatgcctacgtagcatgccacatgtg 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 17521 - 17627
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||||||||||||| |||||||||||||||  |||| ||| |  |||||||| || |||| ||||| |||||||||||||||||||||||||||||||    
T  17521 cccctaagtacaaaaactacaattttggccccccaagaattatcccctttgcaatttcgatcttttttaccaattttgaccggtcaatgcctacgtggca 17620  T
Q  174 cgccacg 180  Q
     ||||||    
T  17621 tgccacg 17627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 18826 - 18716
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||||||||| || |||||||||||||||| |||||||  | |||||||||| ||| |||| | ||||||||||||||||||||||||||||||    
T  18826 cccctaggtacaaaaactataattttggccccttaaaatttagccccattgcaactttaatcattttggtcaattttgaccggtcaatgcctacgtggca 18727  T
Q  174 cgccacgtgtg 184  Q
    | |||| ||||    
T  18726 caccacttgtg 18716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 14999221 - 14999101
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||||| ||| |||||||| |||||||||||| || |||||||||||  ||||||| ||||| ||||||  | ||||||||||||||    
T  14999221 aacttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatctttgttcctttaggtcaattttgaccggt 14999122  T
Q  158 caatgcctacgtggcacgcca 178  Q
    |||||| ||||||||| ||||    
T  14999121 caatgcttacgtggcatgcca 14999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 34352832 - 34352726
Alignment:
Q  78 taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgcc 177  Q
    |||||||| ||| || |||||||||||  ||||||||| | |  |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||    
T  34352832 taagtacataaactataattttggccctctaagatttaaccttattgcaactttaatcattttggccaattttgaccggtcaatgcctacgtgacacgcc 34352733  T
Q  178 acgtgtg 184  Q
    |||||||    
T  34352732 acgtgtg 34352726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 42886349 - 42886226
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaa 160  Q
    |||||||||| ||||| ||| |||||||| ||||||||| ||||| |||||||||||   |||||| |||||||| |||| | |||||||||||| ||||    
T  42886349 ttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgcatctttgatcattttggtcaattttgaccgatcaa 42886250  T
Q  161 tgcctacgtggcacgccacgtgtg 184  Q
    || ||| |||||| ||||||||||    
T  42886249 tgtctatgtggcatgccacgtgtg 42886226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 18371459 - 18371585
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cgg 156  Q
    |||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||||   |||||| ||||||||||||| | ||||||||||        
T  18371459 aacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatttgcatctttgatccttttggtcaattttgacttat 18371558  T
Q  157 tcaatgcctacgtggcacgccacgtgt 183  Q
    |||| |||||||||||| |||||||||    
T  18371559 tcaacgcctacgtggcaggccacgtgt 18371585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 31659674 - 31659753
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  | |||||| |||||||||||| | ||||||||||    
T  31659674 cccctaagtacaaaaactacaattttggccccctaagatttagccccattgcaaatttgatccttttggtcaattttgac 31659753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 22629539 - 22629616
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||| ||||||||||||||| |||||||||||  ||||||| ||||| ||||||| | ||||||||||    
T  22629539 cctaagtacaaaaactacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgac 22629616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 7501902 - 7501791
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac-cggtcaatgcctacgtggc 172  Q
    ||||||||||  ||||  ||||||||||||||||||||| ||||  ||||||| ||||| ||||||| | ||||||||||    ||||||||||||||||    
T  7501902 cccctaagtatcaaaacaacaattttggccccttaagatgtagcccctttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggc 7501803  T
Q  173 acgccacgtgtg 184  Q
    | ||||||||||    
T  7501802 aggccacgtgtg 7501791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 14998042 - 14998140
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    |||| |||||||||||||||| |||||||||||  ||||||| ||||| ||||||| | ||||||| | |||||||||||||| | ||| ||||||||||    
T  14998042 aaaacttacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttaatcggtcaatgcctacat-gcatgccacgtgtg 14998140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 18372507 - 18372428
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  ||||| | ||||| ||||||| | ||||||||||    
T  18372507 cccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtccttttggtcaattttgac 18372428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 769448 - 769574
Alignment:
Q  59 aacttgcaattttaacc-cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggt 157  Q
    ||||||||||||| ||  ||||||||||||||||| ||||||||| || | ||| ||| |   |||||| |||||||||||||  ||||||||||||| |    
T  769448 aacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccatttgcatctttgatccttttgcccaattttgaccgat 769547  T
Q  158 caatgcctacgtggcacgccacgtgtg 184  Q
    ||||  ||||||||||||  |||||||    
T  769548 caatatctacgtggcacgttacgtgtg 769574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 770791 - 770714
Alignment:
Q  94 aattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtgg 171  Q
    |||||||||||| ||| |||||||  ||||||| |||||||| |||| | ||||||||||||||||||| ||||||||    
T  770791 aattttggccccctaaaatttagcccctttgcatctttgatcattttggtcaattttgaccggtcaatgtctacgtgg 770714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 32253458 - 32253373
Alignment:
Q  93 caattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgcca 178  Q
    |||||||| || | ||||||||||   ||||||| ||||| ||||||| || |||||||||||||||||| |||||||||||||||    
T  32253458 caattttgaccacctaagatttagtccctttgcatctttggtccttttggcaaattttgaccggtcaatgtctacgtggcacgcca 32253373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 34351608 - 34351649
Alignment:
Q  143 ccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34351608 ccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 34351649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 48933727 - 48933805
Alignment:
Q  83 acaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgc 163  Q
    ||||||| ||||||||||  ||||||||||||| | |||  |||||||||||||||||| ||||||||||||| |||||||    
T  48933727 acaaaaactacaattttgatcccttaagatttatcctct--gcaactttgatccttttttccaattttgaccgctcaatgc 48933805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 7500489 - 7500584
Alignment:
Q  59 aacttgcaattttaaccc-ctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||||||| | || ||||||| | |||  |||||||||||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  7500489 aacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctttgcatctttgatccttttggtcaattttgac 7500584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 47369816 - 47369889
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaacttt 131  Q
    |||||||||||||| || | |||||||||||| || ||||||||||||||||||||||||  ||||||| ||||    
T  47369816 aacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatcttt 47369889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 21505473 - 21505542
Alignment:
Q  82 tacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttg 151  Q
    |||||||| |||||||||| |||| |||||||||||  ||||||| ||||| ||||||| | ||||||||    
T  21505473 tacaaaaactacaattttgaccccataagatttagcccctttgcatctttggtccttttggacaattttg 21505542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 3227158 - 3227238
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | ||||||||||||||||  | ||||||||||| |||||||   |||||||||||    
T  3227158 cccctaagtaccaaaaccacaatttagcccccttaagatttagccccattgcaactttggtccttttgaacaattttgacc 3227238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 17781696 - 17781792
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||| ||||  |||||||   |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  17781696 aacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 17781792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 47525433 - 47525337
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||| |||| ||||||  ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||  ||||||||||||    
T  47525433 aacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgaccaattttgacc 47525337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 128664 - 128571
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||| ||||| ||||||| ||||  ||||||| | |||| ||||||| |||  | |||||||||||| ||||||  ||||||||||||    
T  128664 ttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgcaactttgacccttttaaccaattttgacc 128571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 6618269 - 6618369
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc-ggtcaatgcctacgtggcacgccacgtgt 183  Q
    |||||||||||||||| | || |||||||| || || |||||| ||||||| ||||   |||||||||||  ||||| ||||| |||||| ||||| |||    
T  6618269 aaaaattacaattttgactccctaagattttgcctcattgcaaatttgatcattttgatcaattttgacctagtcaacgcctatgtggcatgccacatgt 6618368  T
Q  184 g 184  Q
    |    
T  6618369 g 6618369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 31949373 - 31949453
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||| ||||  ||||||| | |||| |||||||||||  | ||||||||||| |||||||   |||||||||||    
T  31949373 cccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgcaactttggtccttttgatcaattttgacc 31949453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 284 - 394
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggca 173  Q
    |||||| ||||||||| || |||||||| ||| ||||| |||||  |||||||  ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  284 cccctatgtacaaaaactataattttggtcccctaagaattagcccctttgcatatttgatcctttttcccaattttgaccggtcaacgcctatgtggca 383  T
Q  174 cgccacgtgtg 184  Q
     ||||||||||    
T  384 tgccacgtgtg 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 1021 - 918
Alignment:
Q  81 gtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacg 180  Q
    ||||||||| || ||||||||||||  |||| |||||  |||||||  |||| |||||||| |||||||||||||||||| || ||||||||| ||||||    
T  1021 gtacaaaaactataattttggccccccaagaattagcccctttgcatatttggtcctttttcccaattttgaccggtcaacgcttacgtggcatgccacg 922  T
Q  181 tgtg 184  Q
    ||||    
T  921 tgtg 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 3746 - 3836
Alignment:
Q  94 aattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcacgccacgtgtg 184  Q
    |||||| | ||| |||||||||||  | |||||||||| ||| |||| | |||||||||| ||||||||||||||||||||||||||||||    
T  3746 aattttagtcccctaagatttagccgcattgcaactttaatctttttggtcaattttgactggtcaatgcctacgtggcacgccacgtgtg 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 4780 - 4684
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtg 170  Q
    ||||||| |||| ||| |||||||||| |||  |||  ||||||  | |||||||||| ||||||||  ||||||||||||| ||||||||||||||    
T  4780 cccctaaatacagaaactacaattttgaccctctaaattttagccccattgcaactttaatccttttgaccaattttgaccgatcaatgcctacgtg 4684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 49472 - 49403
Alignment:
Q  85 aaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||| |||||||||| |||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  49472 aaaaactacaattttgaccccctaagatttagctcctttgcaactttggtccttttggccaattttgacc 49403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 5504 - 5408
Alignment:
Q  59 aacttgcaattttaacccct-aagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||  | || ||| |||||||||||| |  ||||||||||    
T  5504 aacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagccccattacaaatttgatccttttggttaattttgacc 5408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 2531 - 2435
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||||||||  || ||||||||||| || ||||||||| | |||||| ||| |||||||| | |||||||||||    
T  2531 aacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacattgcaaatttcatccttttggtcaattttgacc 2435  T

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Target: scaffold0093; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 7154 - 7058
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| ||||||||||||  || ||||||||||| || ||||||||| | |||||| ||| |||||||| | |||||||||||    
T  7154 aacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacattgcaaatttcatccttttggtcaattttgacc 7058  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 61525 - 61429
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||||||| |||| |||||||||||| || |||||||||||| || ||||||||   |||||| ||||| ||||||| | |||||||||||    
T  61525 aacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagcccttttgcatctttggtccttttggtcaattttgacc 61429  T

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Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 60125 - 60221
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| || ||| ||||| |||||||||| |||| || ||||||||  ||||||| ||||| || |||| | |||||||||||    
T  60125 aacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctttgcatctttggtctttttggtcaattttgacc 60221  T

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Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 7465 - 7399
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    |||||| ||||| ||| |||||||||| |||| |||||||||||  |||||||||||||||||||||    
T  7465 cccctatgtacagaaactacaattttgaccccctaagatttagcccctttgcaactttgatcctttt 7399  T

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Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 7933 - 7890
Alignment:
Q  110 gatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||    
T  7933 gatttagcccctttgcaactttgatccttttggccaattttgac 7890  T

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Target: scaffold0586 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 6394 - 6460
Alignment:
Q  74 cccctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttt 140  Q
    |||||| ||||||||| |||||||||| |||| ||||||||||| | |||||| ||||| |||||||    
T  6394 cccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgcatctttggtcctttt 6460  T

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Target: scaffold0586; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 9074 - 8998
Alignment:
Q  76 cctaagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgac 153  Q
    |||| ||||||||| ||||||||||||||| |||||||||||     |||| |||||||||||||  |||||||||||    
T  9074 cctatgtacaaaaactacaattttggcccc-taagatttagccctcatgcatctttgatccttttgaccaattttgac 8998  T

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Target: scaffold1303 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 1474 - 1570
Alignment:
Q  59 aacttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    ||||||||||||| ||||| || ||| ||||| || ||||||| |||| |||||||||||   |||||| ||||| ||||||| | |||||||||||    
T  1474 aacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatttgcatctttggtccttttggtcaattttgacc 1570  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 37185 - 37278
Alignment:
Q  62 ttgcaattttaacccc-taagtacaaaaattacaattttggccccttaagatttagcttctttgcaactttgatcctttttgccaattttgacc 154  Q
    |||||||||| ||||| ||||||||||||  |||||||||||||| || ||||||||  | ||| || ||| ||| |||| | |||||||||||    
T  37185 ttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagccccattgaaaatttcatcattttggtcaattttgacc 37278  T

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