View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12743_low_2 (Length: 379)
Name: NF12743_low_2
Description: NF12743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12743_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 35 - 344
Target Start/End: Complemental strand, 7042095 - 7041786
Alignment:
| Q |
35 |
aaatttattcacccagttattatggtatataaatcaaattatcaaatgatcaaagtacccagaagatataaatccaacacagcaagaatacataacatgc |
134 |
Q |
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| T |
7042095 |
aaatttattcacccagttattatggtatataaatcaaattatcaaatgatcaaagtacccagaagatataaatccaacacagcaagaatacataacatgc |
7041996 |
T |
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| Q |
135 |
aaatccaattagagtcaaaatgttaaacaattaatacattgaaacccaaaacccctaatcacaaatacccaattgcataaactggttaaatccctgcata |
234 |
Q |
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| T |
7041995 |
aaatccaattagagtcaaaatgttaaacaattattacattgaaacccaaaacccttaatcacaaatacccaattgcataaactggttaaatccctgcata |
7041896 |
T |
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| Q |
235 |
attgtacattagctagtaaaattaagataaaccctaaccaaaatcatggtatataacattataaacatgtaatgtaattgcatgtaataaaattttgttg |
334 |
Q |
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| T |
7041895 |
attgtacattagctagtaaaattaagataaaccctaaccaaaatcatggtatataacattataaacatgtaatgtaattgcatgtaataaaaatttgctg |
7041796 |
T |
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| Q |
335 |
cagaagcata |
344 |
Q |
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| T |
7041795 |
cagaaccata |
7041786 |
T |
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