View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12744_low_7 (Length: 231)

Name: NF12744_low_7
Description: NF12744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12744_low_7
NF12744_low_7
[»] chr4 (67 HSPs)
chr4 (1-164)||(28465466-28465629)
chr4 (1-168)||(21034229-21034397)
chr4 (1-164)||(34789380-34789543)
chr4 (1-162)||(14440213-14440374)
chr4 (1-162)||(12593024-12593185)
chr4 (1-162)||(56077709-56077870)
chr4 (1-159)||(41114160-41114320)
chr4 (19-160)||(54440972-54441113)
chr4 (1-162)||(26974283-26974445)
chr4 (1-162)||(46737040-46737201)
chr4 (1-159)||(45838932-45839092)
chr4 (1-160)||(28465083-28465242)
chr4 (13-159)||(28166007-28166153)
chr4 (1-162)||(46736655-46736816)
chr4 (1-159)||(14439831-14439989)
chr4 (1-162)||(55677342-55677504)
chr4 (13-162)||(33689829-33689977)
chr4 (1-168)||(19528863-19529031)
chr4 (1-160)||(34789767-34789927)
chr4 (1-162)||(12593408-12593569)
chr4 (1-162)||(36168716-36168877)
chr4 (24-159)||(33777635-33777770)
chr4 (1-159)||(34807524-34807682)
chr4 (13-162)||(45838547-45838696)
chr4 (1-160)||(54440573-54440730)
chr4 (1-159)||(6616675-6616834)
chr4 (1-162)||(21034621-21034783)
chr4 (1-162)||(34807116-34807278)
chr4 (13-160)||(24851862-24852010)
chr4 (1-159)||(35643558-35643728)
chr4 (1-162)||(19529078-19529240)
chr4 (24-160)||(33778020-33778156)
chr4 (71-162)||(24851316-24851407)
chr4 (20-159)||(36168332-36168474)
chr4 (1-159)||(41608377-41608536)
chr4 (13-159)||(16214892-16215038)
chr4 (2-148)||(35193322-35193467)
chr4 (71-171)||(41608870-41608971)
chr4 (28-172)||(6617074-6617217)
chr4 (2-137)||(17504345-17504480)
chr4 (74-160)||(1397597-1397683)
chr4 (1-159)||(229544-229702)
chr4 (34-159)||(26974662-26974788)
chr4 (51-161)||(23986521-23986632)
chr4 (23-162)||(40160094-40160232)
chr4 (2-162)||(17503974-17504133)
chr4 (1-159)||(229164-229322)
chr4 (15-162)||(35193702-35193848)
chr4 (22-164)||(40160497-40160638)
chr4 (55-164)||(30597958-30598067)
chr4 (3-162)||(24335761-24335920)
chr4 (89-167)||(44219370-44219448)
chr4 (1-161)||(18965141-18965301)
chr4 (13-160)||(24336160-24336307)
chr4 (1-68)||(24851559-24851626)
chr4 (48-162)||(51309936-51310051)
chr4 (1-128)||(18965521-18965648)
chr4 (82-159)||(10795777-10795854)
chr4 (28-72)||(35643970-35644014)
chr4 (96-160)||(35644042-35644106)
chr4 (2-163)||(25447246-25447408)
chr4 (88-160)||(51641302-51641374)
chr4 (87-162)||(12930804-12930879)
chr4 (2-163)||(46193404-46193566)
chr4 (3-162)||(15523235-15523395)
chr4 (109-165)||(16691563-16691619)
chr4 (109-161)||(20958351-20958403)
[»] chr3 (75 HSPs)
chr3 (1-159)||(49951549-49951707)
chr3 (1-162)||(41998229-41998391)
chr3 (1-162)||(38535309-38535470)
chr3 (1-164)||(43678293-43678456)
chr3 (1-168)||(55389599-55389766)
chr3 (1-159)||(44676857-44677015)
chr3 (1-159)||(51473240-51473399)
chr3 (1-162)||(16701174-16701338)
chr3 (1-171)||(32730774-32730944)
chr3 (28-162)||(49720773-49720907)
chr3 (1-163)||(50662797-50662959)
chr3 (1-165)||(51828342-51828507)
chr3 (3-162)||(330223-330382)
chr3 (1-164)||(51828925-51829088)
chr3 (1-162)||(47431696-47431858)
chr3 (1-162)||(52375716-52375877)
chr3 (24-164)||(329844-329984)
chr3 (1-161)||(46013807-46013968)
chr3 (1-162)||(51827957-51828118)
chr3 (1-162)||(2051295-2051460)
chr3 (1-164)||(40275479-40275641)
chr3 (1-168)||(40838646-40838813)
chr3 (1-164)||(40839037-40839200)
chr3 (1-160)||(52237202-52237361)
chr3 (1-162)||(34104638-34104798)
chr3 (1-162)||(55389982-55390143)
chr3 (1-162)||(14654199-14654352)
chr3 (1-159)||(22370599-22370758)
chr3 (1-164)||(49951931-49952094)
chr3 (1-160)||(52236818-52236977)
chr3 (1-162)||(25534890-25535052)
chr3 (1-162)||(2044271-2044432)
chr3 (1-163)||(40275092-40275256)
chr3 (13-162)||(46013422-46013571)
chr3 (1-160)||(30513724-30513883)
chr3 (1-164)||(52375325-52375488)
chr3 (1-163)||(43678669-43678831)
chr3 (1-162)||(51828539-51828701)
chr3 (1-162)||(38535680-38535841)
chr3 (1-162)||(49720371-49720532)
chr3 (1-162)||(51472855-51473016)
chr3 (1-164)||(44676470-44676633)
chr3 (1-162)||(14654576-14654735)
chr3 (1-159)||(32730392-32730550)
chr3 (28-168)||(16689352-16689492)
chr3 (1-156)||(34105033-34105190)
chr3 (24-162)||(39010075-39010213)
chr3 (13-160)||(36701493-36701640)
chr3 (2-162)||(49407796-49407955)
chr3 (30-162)||(41998643-41998774)
chr3 (13-162)||(50900925-50901073)
chr3 (13-162)||(27200089-27200237)
chr3 (1-164)||(43222388-43222551)
chr3 (2-164)||(55192116-55192277)
chr3 (63-149)||(39010468-39010554)
chr3 (1-161)||(43222774-43222935)
chr3 (13-161)||(37075687-37075837)
chr3 (63-162)||(36701106-36701206)
chr3 (71-162)||(33412609-33412700)
chr3 (63-159)||(27199705-27199801)
chr3 (51-161)||(37076109-37076219)
chr3 (13-161)||(49408180-49408326)
chr3 (63-164)||(8874133-8874234)
chr3 (54-166)||(12141128-12141241)
chr3 (51-160)||(50900534-50900644)
chr3 (2-162)||(5137365-5137526)
chr3 (2-159)||(8873694-8873850)
chr3 (23-159)||(2323382-2323517)
chr3 (2-125)||(37847206-37847328)
chr3 (87-162)||(20840560-20840635)
chr3 (13-162)||(20840956-20841106)
chr3 (109-162)||(23644462-23644515)
chr3 (109-162)||(30104482-30104535)
chr3 (79-164)||(39556039-39556124)
chr3 (87-159)||(25612447-25612519)
[»] chr7 (55 HSPs)
chr7 (1-162)||(7732872-7733033)
chr7 (1-165)||(9181529-9181693)
chr7 (1-159)||(25637583-25637741)
chr7 (1-162)||(48247976-48248138)
chr7 (1-161)||(15712366-15712526)
chr7 (13-160)||(27245601-27245748)
chr7 (1-159)||(14311672-14311830)
chr7 (1-159)||(5745642-5745800)
chr7 (1-162)||(16081299-16081460)
chr7 (1-162)||(786782-786944)
chr7 (1-162)||(7732488-7732649)
chr7 (42-162)||(16917713-16917833)
chr7 (13-164)||(28687591-28687742)
chr7 (1-159)||(26026703-26026861)
chr7 (1-162)||(16081684-16081845)
chr7 (1-162)||(11971334-11971499)
chr7 (13-156)||(35161198-35161342)
chr7 (13-164)||(27245201-27245353)
chr7 (28-162)||(5333880-5334014)
chr7 (1-163)||(26048332-26048493)
chr7 (1-159)||(28687884-28688041)
chr7 (1-162)||(2758083-2758244)
chr7 (3-162)||(25637197-25637357)
chr7 (1-162)||(48247587-48247752)
chr7 (1-159)||(26026320-26026479)
chr7 (1-162)||(5746024-5746186)
chr7 (1-164)||(24929688-24929856)
chr7 (18-161)||(39388669-39388813)
chr7 (1-162)||(9181794-9181958)
chr7 (1-162)||(34595157-34595318)
chr7 (51-160)||(5334254-5334363)
chr7 (2-161)||(9394117-9394274)
chr7 (1-159)||(26047960-26048109)
chr7 (1-159)||(11973787-11973945)
chr7 (13-159)||(787179-787329)
chr7 (1-160)||(14311317-14311477)
chr7 (71-155)||(35160660-35160746)
chr7 (72-162)||(39136686-39136776)
chr7 (20-164)||(4477700-4477844)
chr7 (2-161)||(35579272-35579430)
chr7 (74-162)||(39136991-39137079)
chr7 (2-159)||(35578902-35579058)
chr7 (1-159)||(33880970-33881132)
chr7 (28-162)||(49064034-49064167)
chr7 (23-160)||(9393738-9393874)
chr7 (13-68)||(5184488-5184543)
chr7 (97-164)||(40669689-40669756)
chr7 (51-162)||(45815344-45815454)
chr7 (13-162)||(2658839-2658989)
chr7 (72-162)||(49064176-49064266)
chr7 (115-160)||(34594585-34594630)
chr7 (28-72)||(35160892-35160936)
chr7 (108-159)||(5184431-5184482)
chr7 (51-160)||(33880622-33880732)
chr7 (79-164)||(35288901-35288986)
[»] chr5 (41 HSPs)
chr5 (1-162)||(28290029-28290190)
chr5 (3-161)||(8419008-8419165)
chr5 (1-164)||(19291354-19291518)
chr5 (24-162)||(18149733-18149871)
chr5 (1-162)||(15029694-15029855)
chr5 (1-162)||(21371081-21371242)
chr5 (13-158)||(38900648-38900793)
chr5 (1-170)||(15115480-15115647)
chr5 (1-164)||(38901027-38901188)
chr5 (1-162)||(28289684-28289845)
chr5 (1-160)||(39083361-39083521)
chr5 (1-161)||(32697608-32697771)
chr5 (4-159)||(4966819-4966973)
chr5 (13-162)||(4967166-4967317)
chr5 (13-171)||(18150120-18150279)
chr5 (20-159)||(21370689-21370836)
chr5 (13-162)||(16752582-16752730)
chr5 (82-159)||(14340401-14340478)
chr5 (2-161)||(10721787-10721945)
chr5 (1-159)||(14340792-14340953)
chr5 (1-124)||(5161620-5161744)
chr5 (2-162)||(27307061-27307220)
chr5 (31-162)||(5161983-5162115)
chr5 (2-161)||(28494845-28495003)
chr5 (72-162)||(22651767-22651857)
chr5 (2-162)||(41834445-41834605)
chr5 (13-160)||(22651347-22651494)
chr5 (2-161)||(27307444-27307605)
chr5 (2-137)||(32305843-32305977)
chr5 (72-159)||(20266371-20266458)
chr5 (72-162)||(17260676-17260766)
chr5 (51-137)||(13557017-13557103)
chr5 (91-160)||(16753045-16753114)
chr5 (81-162)||(28495296-28495377)
chr5 (109-164)||(164189-164244)
chr5 (109-167)||(5819421-5819479)
chr5 (2-162)||(8647822-8647983)
chr5 (109-162)||(24362328-24362381)
chr5 (79-163)||(8647437-8647521)
chr5 (87-163)||(19359135-19359211)
chr5 (72-160)||(28595182-28595270)
[»] chr2 (61 HSPs)
chr2 (13-162)||(38008348-38008497)
chr2 (1-162)||(11539637-11539799)
chr2 (1-162)||(20127736-20127898)
chr2 (1-162)||(6949451-6949613)
chr2 (1-162)||(33920996-33921158)
chr2 (3-162)||(43160397-43160557)
chr2 (1-162)||(62957-63118)
chr2 (1-162)||(4356141-4356302)
chr2 (1-162)||(16952935-16953098)
chr2 (1-162)||(17060906-17061069)
chr2 (1-168)||(11540023-11540190)
chr2 (1-164)||(42192238-42192401)
chr2 (1-162)||(4809264-4809425)
chr2 (1-162)||(20128122-20128283)
chr2 (3-162)||(38007950-38008110)
chr2 (1-162)||(42192627-42192789)
chr2 (1-162)||(44219644-44219805)
chr2 (3-162)||(13399807-13399965)
chr2 (1-165)||(4355752-4355916)
chr2 (1-159)||(13315496-13315658)
chr2 (1-159)||(15551059-15551218)
chr2 (1-162)||(43216094-43216255)
chr2 (1-161)||(16953319-16953479)
chr2 (1-158)||(16175734-16175892)
chr2 (1-162)||(32418159-32418318)
chr2 (1-162)||(44220028-44220191)
chr2 (52-162)||(5560051-5560161)
chr2 (13-162)||(649527-649676)
chr2 (1-159)||(15550676-15550835)
chr2 (1-159)||(4808882-4809040)
chr2 (1-159)||(33920615-33920773)
chr2 (20-162)||(32418550-32418692)
chr2 (1-162)||(24140064-24140220)
chr2 (1-130)||(13399454-13399583)
chr2 (1-159)||(43160012-43160171)
chr2 (28-164)||(6949854-6949992)
chr2 (1-168)||(63343-63516)
chr2 (4-162)||(31797166-31797323)
chr2 (80-160)||(649801-649881)
chr2 (1-159)||(9330179-9330338)
chr2 (47-162)||(25336030-25336146)
chr2 (2-162)||(28143416-28143575)
chr2 (1-89)||(5560935-5561023)
chr2 (100-159)||(9329915-9329974)
chr2 (13-162)||(14942241-14942392)
chr2 (55-159)||(20495196-20495301)
chr2 (48-122)||(5035903-5035978)
chr2 (76-152)||(2190536-2190612)
chr2 (79-173)||(35779697-35779791)
chr2 (1-66)||(43215805-43215870)
chr2 (48-159)||(3822924-3823036)
chr2 (52-159)||(3824143-3824251)
chr2 (101-159)||(9329833-9329892)
chr2 (1-159)||(22445642-22445801)
chr2 (2-162)||(18450830-18450991)
chr2 (2-162)||(28616998-28617159)
chr2 (13-63)||(9329980-9330030)
chr2 (128-162)||(17023600-17023634)
chr2 (94-159)||(5561018-5561083)
chr2 (109-162)||(20440523-20440576)
chr2 (109-162)||(20444749-20444802)
[»] chr8 (40 HSPs)
chr8 (1-162)||(15256213-15256377)
chr8 (3-164)||(18049588-18049750)
chr8 (1-159)||(18428146-18428305)
chr8 (1-162)||(34799079-34799241)
chr8 (30-162)||(41260271-41260403)
chr8 (1-164)||(9796724-9796887)
chr8 (1-166)||(9797111-9797277)
chr8 (1-162)||(599883-600044)
chr8 (1-160)||(28254427-28254587)
chr8 (1-162)||(5730817-5730978)
chr8 (1-160)||(2208716-2208876)
chr8 (1-162)||(16578481-16578642)
chr8 (1-161)||(28254811-28254971)
chr8 (1-161)||(42035773-42035933)
chr8 (24-162)||(15255853-15255991)
chr8 (1-162)||(35427197-35427358)
chr8 (1-164)||(7911001-7911164)
chr8 (1-162)||(599532-599693)
chr8 (13-162)||(34799480-34799629)
chr8 (3-159)||(18049978-18050134)
chr8 (20-162)||(16578108-16578250)
chr8 (1-162)||(41260646-41260807)
chr8 (1-159)||(35694255-35694421)
chr8 (1-160)||(5731197-5731356)
chr8 (1-162)||(6115495-6115657)
chr8 (1-161)||(35693869-35694031)
chr8 (13-162)||(26252811-26252958)
chr8 (1-90)||(35426885-35426974)
chr8 (1-162)||(7910616-7910778)
chr8 (1-162)||(42036156-42036318)
chr8 (54-162)||(18674148-18674256)
chr8 (2-159)||(28877276-28877432)
chr8 (109-159)||(35426845-35426895)
chr8 (2-159)||(18805167-18805322)
chr8 (72-162)||(9930112-9930202)
chr8 (64-155)||(28876910-28877002)
chr8 (55-159)||(2617748-2617853)
chr8 (2-162)||(11656841-11657002)
chr8 (64-135)||(10047083-10047155)
chr8 (1-45)||(35163815-35163859)
[»] chr1 (62 HSPs)
chr1 (1-160)||(34555765-34555926)
chr1 (1-162)||(9992154-9992316)
chr1 (1-159)||(21938566-21938724)
chr1 (1-162)||(37505067-37505229)
chr1 (13-162)||(30786771-30786921)
chr1 (1-162)||(16299067-16299227)
chr1 (1-163)||(10278935-10279094)
chr1 (3-164)||(50305169-50305333)
chr1 (3-164)||(9992542-9992703)
chr1 (1-162)||(52335895-52336056)
chr1 (1-161)||(44954611-44954771)
chr1 (1-167)||(1837500-1837666)
chr1 (1-162)||(2868093-2868254)
chr1 (1-164)||(23340181-23340344)
chr1 (1-160)||(10278550-10278710)
chr1 (1-160)||(44582059-44582218)
chr1 (1-159)||(8230026-8230184)
chr1 (1-159)||(44954229-44954387)
chr1 (1-162)||(4080021-4080182)
chr1 (1-159)||(37421163-37421323)
chr1 (1-168)||(443936-444103)
chr1 (1-160)||(2867913-2868072)
chr1 (1-159)||(17641749-17641912)
chr1 (1-170)||(44582442-44582613)
chr1 (13-162)||(34555379-34555530)
chr1 (1-162)||(29438930-29439092)
chr1 (2-159)||(45048158-45048314)
chr1 (30-161)||(16298683-16298814)
chr1 (28-159)||(29439333-29439465)
chr1 (60-159)||(37421388-37421488)
chr1 (63-162)||(30787245-30787344)
chr1 (1-164)||(37505453-37505615)
chr1 (1-162)||(8229637-8229801)
chr1 (2-159)||(39485068-39485224)
chr1 (1-159)||(6224700-6224860)
chr1 (1-124)||(17641403-17641526)
chr1 (1-160)||(1744330-1744488)
chr1 (13-162)||(50926638-50926787)
chr1 (13-161)||(23526659-23526807)
chr1 (1-163)||(9833537-9833699)
chr1 (69-160)||(50304441-50304532)
chr1 (12-159)||(45048532-45048678)
chr1 (2-162)||(44802557-44802717)
chr1 (2-162)||(17088526-17088685)
chr1 (4-162)||(29021252-29021411)
chr1 (13-160)||(50926232-50926381)
chr1 (55-164)||(25274754-25274863)
chr1 (13-164)||(29020878-29021029)
chr1 (1-160)||(44291303-44291463)
chr1 (51-160)||(23526965-23527074)
chr1 (3-68)||(50304876-50304941)
chr1 (13-136)||(44291708-44291831)
chr1 (89-162)||(39843497-39843570)
chr1 (63-159)||(50419393-50419490)
chr1 (63-162)||(17088146-17088245)
chr1 (55-162)||(50419698-50419806)
chr1 (1-68)||(30787157-30787224)
chr1 (1-162)||(48173748-48173910)
chr1 (43-122)||(36229406-36229486)
chr1 (48-167)||(52233733-52233853)
chr1 (2-168)||(29307326-29307493)
chr1 (55-162)||(52235106-52235214)
[»] chr6 (36 HSPs)
chr6 (1-162)||(5114468-5114629)
chr6 (1-163)||(25472397-25472560)
chr6 (13-159)||(24640582-24640728)
chr6 (3-162)||(5120856-5121015)
chr6 (1-162)||(31574110-31574271)
chr6 (13-162)||(30251088-30251238)
chr6 (1-163)||(31073527-31073689)
chr6 (1-162)||(31573720-31573886)
chr6 (13-162)||(29891477-29891630)
chr6 (3-159)||(25468852-25469010)
chr6 (18-167)||(28636287-28636435)
chr6 (22-168)||(31073137-31073290)
chr6 (1-162)||(29891080-29891241)
chr6 (1-89)||(28636581-28636669)
chr6 (2-164)||(32836383-32836544)
chr6 (2-162)||(35163572-35163733)
chr6 (51-159)||(35163187-35163295)
chr6 (17-160)||(33095716-33095859)
chr6 (16-164)||(33096007-33096159)
chr6 (109-164)||(22534217-22534272)
chr6 (90-159)||(31242809-31242878)
chr6 (18-162)||(835394-835537)
chr6 (1-79)||(30250774-30250852)
chr6 (108-161)||(30250722-30250775)
chr6 (80-159)||(32836010-32836089)
chr6 (109-171)||(18257629-18257691)
chr6 (2-162)||(12935157-12935318)
chr6 (86-162)||(835695-835771)
chr6 (89-160)||(18297662-18297733)
chr6 (111-169)||(4811365-4811423)
chr6 (111-164)||(10900424-10900477)
chr6 (2-162)||(11445371-11445532)
chr6 (109-162)||(28472637-28472690)
chr6 (109-162)||(29859826-29859879)
chr6 (79-159)||(3835188-3835268)
chr6 (13-99)||(11523747-11523834)
[»] scaffold0712 (2 HSPs)
scaffold0712 (3-163)||(6391-6551)
scaffold0712 (1-159)||(6776-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (3-163)||(6409-6569)
scaffold0709 (1-159)||(6794-6957)
[»] scaffold0097 (2 HSPs)
scaffold0097 (4-162)||(46655-46814)
scaffold0097 (1-162)||(46266-46428)
[»] scaffold0007 (4 HSPs)
scaffold0007 (13-160)||(205765-205911)
scaffold0007 (72-162)||(210793-210883)
scaffold0007 (64-159)||(204931-205027)
scaffold0007 (64-159)||(205361-205457)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-84)||(78395-78478)
[»] scaffold0021 (1 HSPs)
scaffold0021 (17-162)||(159282-159427)
[»] scaffold0108 (2 HSPs)
scaffold0108 (2-162)||(15113-15272)
scaffold0108 (20-163)||(15503-15645)
[»] scaffold1432 (1 HSPs)
scaffold1432 (55-162)||(504-611)
[»] scaffold0951 (1 HSPs)
scaffold0951 (109-162)||(1667-1720)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28465466 - 28465629
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28465466 actaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 28465565  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28465566 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 28465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21034397 - 21034229
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  21034397 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 21034298  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034297 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 21034229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34789543 - 34789380
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34789543 actaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 34789444  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789443 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 34789380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14440213 - 14440374
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14440213 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggatgattttgttcgattta 14440312  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14440313 aaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaagcc 14440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12593185 - 12593024
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  12593185 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 12593086  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12593085 aaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagcc 12593024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 56077709 - 56077870
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  56077709 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 56077808  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  56077809 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 56077870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 41114320 - 41114160
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  41114320 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgtttttgttcgatt 41114221  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  41114220 taaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 54440972 - 54441113
Alignment:
Q  19 gtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattt 118  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54440972 gtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattt 54441071  T
Q  119 tcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||| || |||||||||||||||||||||||||||||||    
T  54441072 tcgtgagctgatcaaaatggtaggaccaaaagtgtaattaag 54441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26974445 - 26974283
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||||||||    
T  26974445 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 26974346  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  26974345 aaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaagcc 26974283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46737040 - 46737201
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  46737040 actaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 46737139  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  46737140 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 46737201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 45838932 - 45839092
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||||||||||||| |||||||||||||||| ||||| |||||||| |||||||   |||||||||||||||||||||||||||||||    
T  45838932 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 45839031  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  45839032 ttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 28465242 - 28465083
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28465242 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 28465143  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||| || ||||| || |||||| ||||||||||||||| ||||| |||||||||||||||    
T  28465142 aaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaag 28465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 28166153 - 28166007
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  28166153 atttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacaattttgttcgatttaaaaaagatagga 28166054  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||    
T  28166053 ccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46736816 - 46736655
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||||||| || ||||  ||||||||||||||||||||||||| |||||||||||||||    
T  46736816 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaaacatatagtttaaggacaattttgttcgattta 46736717  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  46736716 aaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaagcc 46736655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 14439989 - 14439831
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||  |||||    
T  14439989 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgtttaattta 14439890  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  14439889 aaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 55677342 - 55677504
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||  ||||||||||||||||||    
T  55677342 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgattt 55677441  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || |||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  55677442 aaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcc 55677504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 33689977 - 33689829
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  33689977 atttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaa-catatagtttaaggacgattttgttcgatttaaaagaggtagga 33689879  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| ||| |||||||||||||||||  |||||||||||||||||||||||    
T  33689878 ccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 33689829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19529031 - 19528863
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| ||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  19529031 actaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgattt 19528932  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    |||| || |||||||| |||||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  19528931 aaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagcctatttt 19528863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 34789767 - 34789927
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||| ||||||||||||||    
T  34789767 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgattt 34789866  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  34789867 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12593408 - 12593569
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||| |||||||||| |||||||| ||||||||||||| |||||||| ||||||||| ||||||||||  |||||||||||||||||||    
T  12593408 actaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaatatatagtttacagacgattttgttcgattta 12593507  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  12593508 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 12593569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36168716 - 36168877
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||| |||||||||||| ||||||||||||| ||||||||  |||||||||||||| |||||| |  ||||||||| |||||    
T  36168716 actaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaacatataatttaagaataattttgttctattta 36168815  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36168816 aaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaagcc 36168877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 33777770 - 33777635
Alignment:
Q  24 tttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 123  Q
    |||||||||||| |||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  33777770 tttatggagttgaaaatggagagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtg 33777671  T
Q  124 agttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||| |||||||||||||||    
T  33777670 agttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34807524 - 34807682
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||    
T  34807524 actaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaacatatagtttaaggacgattttgttcgaatta 34807623  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| |  |||||||||||||| |||||||  || |||||||| | |||||||    
T  34807624 aaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 45838696 - 45838547
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  45838696 atttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagga 45838597  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||||||||||||   |||||||||||||||| ||||||    
T  45838596 ccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataagcc 45838547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 54440730 - 54440573
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||| ||| || ||||| ||||||||||||| |||||||| |||||||||||||  ||||| ||||||||||||||||||||    
T  54440730 actaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaaacata--gtttagggacgattttgttcgattta 54440633  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  54440632 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6616834 - 6616675
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||| ||| || |||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  6616834 actaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggacgattttgttcgattt 6616735  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||| |||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  6616734 aaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21034621 - 21034783
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca-tatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| |||| |||| ||||||||||||||||||||||  ||||||| ||||||||| | ||||||| | |||||||||||||||||||    
T  21034621 actaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgattt 21034720  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||||    
T  21034721 aaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcc 21034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34807278 - 34807116
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||| ||||||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||    
T  34807278 actaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgattt 34807179  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || || ||||| |||||||||||| ||||||||  |||||||||||||||||||||||    
T  34807178 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 34807116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 24851862 - 24852010
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||||||||||| |||||||||||||||  ||||| |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| || ||||    
T  24851862 atttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagg 24851961  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    | || |||||||||||||||||||||  |||||||||||| ||||||||    
T  24851962 atcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 35643728 - 35643558
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa------------catatagtttaaggacgatt 88  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||            ||||||||||||||||||||    
T  35643728 actaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaaaaaaaaaaaaaaacatatagtttaaggacgatt 35643629  T
Q  89 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  35643628 ttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaa 35643558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 19529078 - 19529240
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |  ||||||||||| |||||||  ||||||| ||||||| |||||||||||||| ||||||||||||| ||||    
T  19529078 actaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaacatatagtttaaagacgattttgttcaattt 19529177  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |||||| | ||||||  | |||||||||||||||||||| ||||||||||||||||||    
T  19529178 aaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaagcc 19529240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 33778020 - 33778156
Alignment:
Q  24 tttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 123  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||| | ||||||||||| ||||||||| || ||| | ||||||||||    
T  33778020 tttatggagttggaaatagggagatagaactaaaactgcaaaaaacatataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcgtg 33778119  T
Q  124 agttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||| ||||||||||||| || |||||||||||||||    
T  33778120 agttagtcaaaatggtagaacgaaaagtgtaattaag 33778156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 24851407 - 24851316
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcc 24851316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 36168474 - 36168332
Alignment:
Q  20 tgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa---catatagtttaaggacgattttgttcgatttaaaaaagataggaccat 116  Q
    ||||||| ||||||| |||||||||||||| |||||||| |||||||||   |||||| |||||||||||||||||||||||||||| || || |||||     
T  36168474 tgcgtttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggacgattttgttcgatttaaaagaggtaagaccaa 36168375  T
Q  117 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||| |||||||||||||  |||| |||||||||||||||    
T  36168374 tttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 41608536 - 41608377
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa---catatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||||||||||||| || ||||||||||| ||||||| |||||||| |||||||||   ||||||||||  |||||||||||||||||    
T  41608536 actaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagttt--ggacgattttgttcgat 41608439  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || || ||||| |||| ||||||| ||||||||  ||||||||||||||||||||    
T  41608438 ttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 16214892 - 16215038
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| |||| |||| |||||||| ||||||| |||||  | ||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||    
T  16214892 atttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaatatatagtttaaggacgattttattcaatttaaaaaagatatga 16214991  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||||||||| ||||| |||||||| ||||||||||||| |||||||    
T  16214992 tcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 35193467 - 35193322
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| |||||| ||||||| || ||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  35193467 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttga 35193369  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaa 148  Q
    || || |||||||||||||||||| || ||||||||  |||||||||    
T  35193368 aagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 41608870 - 41608971
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc-aatttta 169  Q
    ||||||||||| ||||||||||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaatttta 41608969  T
Q  170 ta 171  Q
    ||    
T  41608970 ta 41608971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 6617074 - 6617217
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 127  Q
    |||||||||| ||||||||||| |||||||| ||||||||| |||||||||| |||||||||| |||||||||||| || |||||||| |||||||||||    
T  6617074 tggagttggagatagggagataggactaaaactgcaaaaaaaatatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagtt 6617173  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaagccaattttataa 172  Q
     |||||||||  || | ||||| ||||||||| || |||||||||    
T  6617174 agtcaaaatgcaagtagcaaaaatgtaattaaacc-attttataa 6617217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 17504345 - 17504480
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| |||||| ||||||| | |||||| |||   |||| ||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17504345 ctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaaaaaacatatagtttaaggacggttttgttcgatttaa 17504444  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatg 137  Q
    || ||||||||||||||||||||| || ||||||||    
T  17504445 aagagataggaccattttcgtgagctgttcaaaatg 17504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 1397683 - 1397597
Alignment:
Q  74 agtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaag 1397597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 229544 - 229702
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||||||| | |||||||||||| |||||||| ||||| |||| || || ||||| |||||||| ||| |||||||||||||||||||||| |||||    
T  229544 actaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgcaaaaa-catgatagtttaaggacgattttgtttgattt 229642  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||| ||  | ||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  229643 gaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 26974662 - 26974788
Alignment:
Q  34 tggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtca 132  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||| || |||||||| |||||||| ||  |||    
T  26974662 tggaaataggaagatatgactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattca 26974761  T
Q  133 aaatggtaggaccaaaagtgtaattaa 159  Q
    |||||  |||||||||| |||||||||    
T  26974762 aaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 23986632 - 23986521
Alignment:
Q  51 gactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    |||||||| |||||||||||| |||||||| ||||  ||||||||||||| ||| ||| | ||||||||||||||| |||||||||||  ||||||||||    
T  23986632 gactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaa 23986533  T
Q  150 gtgtaattaagc 161  Q
    ||| ||||||||    
T  23986532 gtgaaattaagc 23986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 40160232 - 40160094
Alignment:
Q  23 gtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 122  Q
    |||||| |||||| ||||||| || || |||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||  | ||| ||||||||    
T  40160232 gtttatagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgt 40160134  T
Q  123 gagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |||| ||||||   ||| ||||| ||||||||||||    
T  40160133 gagctggttaaaatgcggggatcaaaaatgtaattaagcc 40160094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 17504133 - 17503974
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| | ||||| |||||||| ||||||| || || |||||||| |||||||||||| |||||||| ||||| || ||||| ||||     
T  17504133 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacggttatgttccatttg 17504036  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| ||  ||||||||||||||||| |||||||||||  |||||||| ||| ||||||||||    
T  17504035 aaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcc 17503974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 229322 - 229164
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaata-gggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| | || |||||||||||||||||| ||||| ||||| ||  ||||||| |||||||| ||| ||||||||||||||||||||||| |||    
T  229322 actaaaactgtcacttttgtgcgtttatggagttgaaaataagggag-tagaactaaaactgcaaaaa-catgatagtttaaggacgattttgttcaatt 229225  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | ||| ||  | ||||||||||| ||| ||||||||||   ||||||||||||||||||||    
T  229224 tgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 35193702 - 35193848
Alignment:
Q  15 ttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggac 113  Q
    |||| ||||||| |||||||| ||||||| || |||||||||||   |||||||||| |||||||| ||||| ||||||| ||||| ||| ||  |||||    
T  35193702 ttctctgcgtttctggagttgaaaatagg-aggtatgactaaaacatcaaaaaacatgatagttta-ggacggttttgttagatttgaaagaggcaggac 35193799  T
Q  114 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||| |  ||||||||  |||||||||||||||||||||||    
T  35193800 cattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagcc 35193848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 40160497 - 40160638
Alignment:
Q  22 cgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttc 120  Q
    ||||| |||||||| ||||||| || || |||||||| |||||||||||| |||||||| ||||| |||||||| |||| ||| ||  | ||| ||||||    
T  40160497 cgtttctggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttta-ggacggttttgttcaatttgaaagaggcatgactattttc 40160594  T
Q  121 gtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||||||||||||||  |||||||||| ||||||||| ||||    
T  40160595 gtgagttggtcaaaatgcaaggaccaaaaatgtaattaaaccaa 40160638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 30597958 - 30598067
Alignment:
Q  55 aaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgta 154  Q
    |||| ||||| ||| ||||| |||| ||||||||||||||||||||||| ||| || |||| || ||||||||||||||||    |||||||||||||||    
T  30597958 aaaagtgcaacaaaaatataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgta 30598057  T
Q  155 attaagccaa 164  Q
    || |||||||    
T  30598058 atcaagccaa 30598067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 24335920 - 24335761
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaa 101  Q
    ||||| ||| |||| ||||||||| |||||||| |||||||| | || |||||||| | |||||||||| |||||| |   ||| ||||||||||||| |    
T  24335920 taaaactgtcatttatgtgcgtttttggagttgaaaatagggtg-taggactaaaactccaaaaaacatgatagttcagatacggttttgttcgatttga 24335822  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || ||  | ||||||||||||||| |||||||||||  |||| | ||||||||||||||||    
T  24335821 aagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaagcc 24335761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 44219448 - 44219370
Alignment:
Q  89 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattt 167  Q
    |||||| |||||||||||| ||||||| |||||||||||||| |||||   ||||||||||||||||||||| ||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaagtcaattt 44219370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18965301 - 18965141
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| | ||||||| | |||||| ||||| |||| ||  ||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  18965301 actaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgcaaaaa-catgatagtttaaggacgattttgttcgattt 18965203  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
     ||| ||  | |||| |||||||||||  || ||||||  |||| ||||| |||||||||||    
T  18965202 gaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaagc 18965141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 24336160 - 24336307
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| | ||||| |||||||| ||||| || | || ||||||||  ||||||||||| ||| |||| | ||| ||||||||||||| ||| ||  |||    
T  24336160 atttctatacgtttctggagttgaaaatatgggg-taggactaaaagagcaaaaaacatgataatttaggaacggttttgttcgatttgaaagaggcagg 24336258  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||| | |||||||||  |||| ||||||||||||||||    
T  24336259 accattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24851626 - 24851559
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa 68  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  24851626 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaa 24851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 51309936 - 51310051
Alignment:
Q  48 tatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 146  Q
    |||||||||||  | ||||||||| |||||||| ||||  ||||||||||||| ||| ||  | ||||||||||||||| |||| ||||||  |||||||    
T  51309936 tatgactaaaaccgtaaaaaacatgatagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggacca 51310035  T
Q  147 aaagtgtaattaagcc 162  Q
    |||||| |||||||||    
T  51310036 aaagtgcaattaagcc 51310051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 18965521 - 18965648
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| |||||||||||||||||| ||||||||   ||||||||||| | | |||||||| |||||||| | |||||||||||| | |     
T  18965521 actaaaactgtcatttatgtgcgtttatggagttgaaaataggggagtatgactaaaactac-aaaaacatgatagtttaggaacgattttgttcaaatc 18965619  T
Q  100 aaaaaagataggaccattttcgtgagttg 128  Q
    |||||||  | ||||||||| ||||||||    
T  18965620 aaaaaaggcatgaccatttttgtgagttg 18965648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 10795777 - 10795854
Alignment:
Q  82 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||| || ||||||||   ||| |||||||||||||||    
T  10795777 gacgattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 35643970 - 35644014
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacata 72  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  35643970 tggagttggaaatagggagataagactaaaactgcaaaaaacata 35644014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 35644042 - 35644106
Alignment:
Q  96 atttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||| || || ||||  |||||||||||||||||||||  |||||||||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 35644106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 25447408 - 25447246
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||||||| |||||| ||||||||||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || ||||||  ||||||||  |||     
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||| |  ||||||| |||| ||||| || |||||    ||||||||||||||||||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 25447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 51641302 - 51641374
Alignment:
Q  88 tttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||| ||||||||||||  |||| || ||||||||||| ||| |||||  ||||| |||||||||||||||    
T  51641302 tttgtttgatttaaaaaaggcaggatcaatttcgtgagtttgtctaaatgcaaggactaaaagtgtaattaag 51641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 12930879 - 12930804
Alignment:
Q  87 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||| ||||||| |   ||| |||||||||||||| ||||||   |||||||||||| |||||||||    
T  12930879 ttttgttcgatttgaaaaagacaatgccaatttcgtgagttggttaaaatgtgcggaccaaaagtgcaattaagcc 12930804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 46193566 - 46193404
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || ||||||  ||||||||  |||     
T  46193566 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtttt 46193467  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||| |  ||||||| |||||||||| || |||||    ||||||||||||||||||||||||    
T  46193466 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 46193404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 15523395 - 15523235
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacata-tagtttaaggacgattttgttcgatttaa 101  Q
    ||||| ||| |||||| ||||||| | ||||| ||||   |||| || ||| |||| ||||||||| ||| || || ||||||  ||||||||  ||| |    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 16691563 - 16691619
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaat 165  Q
    |||||||||||||||||| ||||||||     ||| |||||||||||||||||||||    
T  16691563 aggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagccaat 16691619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 20958351 - 20958403
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||||||||||||||| || ||||||   ||||| ||||||||||||||||    
T  20958351 aggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 49951707 - 49951549
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49951707 actaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 49951608  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49951607 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 41998391 - 41998229
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  41998391 actaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 41998292  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41998291 aaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 41998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38535470 - 38535309
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  38535470 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38535371  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38535370 aaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 38535309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43678456 - 43678293
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| |||||| || |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43678456 actaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 43678357  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43678356 aaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 43678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 55389766 - 55389599
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  55389766 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 55389667  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| |||||    
T  55389666 aaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaattatgcctatttt 55389599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44676857 - 44677015
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44676857 actaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 44676956  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44676957 aaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 51473240 - 51473399
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  51473240 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 51473339  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51473340 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16701174 - 16701338
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||     
T  16701174 actaaaactgtaatttcgatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgaa 16701273  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16701274 ttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 16701338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32730774 - 32730944
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  32730774 actaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaacatatagtttaaggacgattttgttcaattta 32730873  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattttata 171  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| | ||||||||    
T  32730874 aaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaagtctattttata 32730944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 49720773 - 49720907
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 127  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49720773 tggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagtt 49720872  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| |||||||||||||||||||||||||    
T  49720873 ggtcaaaatagtaggaccaaaagtgtaattaagcc 49720907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 50662797 - 50662959
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50662797 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 50662896  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  50662897 aaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagcca 50662959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51828342 - 51828507
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  51828342 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgattt 51828441  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaat 165  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51828442 aaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagccaat 51828507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 330223 - 330382
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacgattttgtttgatttaaa 330322  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  330323 aaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagcc 330382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 51828925 - 51829088
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||    
T  51828925 actaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgtttgaatta 51829024  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  51829025 aaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagccaa 51829088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 47431858 - 47431696
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  47431858 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgattt 47431759  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47431758 aaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 47431696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52375716 - 52375877
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  52375716 actaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacatatagtttatggacgattttgttcaattta 52375815  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  52375816 aaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 52375877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 329984 - 329844
Alignment:
Q  24 tttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 123  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  329984 tttatggagttggaaacagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtg 329885  T
Q  124 agttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||||| || |||||||||||||||| |||||    
T  329884 agttggtcaaaatggaagaaccaaaagtgtaattatgccaa 329844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46013807 - 46013968
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  46013807 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 46013906  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||||||||| |||||||| | ||||||||||||||| ||| |||||||||||||||||||    
T  46013907 aaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51828118 - 51827957
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  51828118 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacatatagtttagggacgattttgttcgattta 51828019  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  51828018 aaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 51827957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2051460 - 2051295
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa----catatagtttaaggacgattttgttcga 96  Q
    ||||||| ||| |||| ||||||||| ||||||| |||||||||| ||| || ||||| |||||||||    ||||||||||||| ||||||||||||||    
T  2051460 actaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 2051361  T
Q  97 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2051360 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 2051295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40275479 - 40275641
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  40275479 actaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagagacgattttgttcgattta 40275578  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  40275579 aaagaggtaggacca-tttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaa 40275641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 40838813 - 40838646
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  40838813 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttatggacgattttgtttgattta 40838714  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    ||| || || |||||||||||||||||||||||||||  |||| ||||||||||||||| || |||||    
T  40838713 aaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaacctatttt 40838646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40839037 - 40839200
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  40839037 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 40839136  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || || ||||||||||||||||| |||||||||  |||||||||||||||||||| ||||    
T  40839137 aaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaaaccaa 40839200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 52237202 - 52237361
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||||||||  |||||| |||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  52237202 actaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacatataatttagggacgattttgttcgattta 52237301  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52237302 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34104798 - 34104638
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||| |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  34104798 actaaaaatgtcatttttgtgcgtttctggagctggaaatagg-agatatgactaaaactgcaaaaaacatatagtttaatgacgattttgttcaattta 34104700  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  34104699 aaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaatgaagcc 34104638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 55389982 - 55390143
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||||||  |||||||||||| ||||||    
T  55389982 actaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaacatatagtttagtgacgattttgtttgattta 55390081  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| ||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  55390082 aaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagcc 55390143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 14654352 - 14654199
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||        ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  14654352 actaaaactgtcatttctgtgcgtttacggagttggaaatagg--------actaaaaatgcaaaaaacatatagtttaaagacgattttgttcgattta 14654261  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  14654260 aaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagcc 14654199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22370758 - 22370599
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| |||||||||||||||||| |||||||||| ||| ||||||| |||||||| ||||||||| ||||||||||| ||||||||||||| | |||    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttt 22370659  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 49951931 - 49952094
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  49951931 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatgtagtttaatgacgattttgttcgattta 49952030  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || || ||||| |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  49952031 aaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaa 49952094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 52236977 - 52236818
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  52236977 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 52236878  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||| || || |||||||||||||| ||| ||||||||  ||||| |||||||||||||||    
T  52236877 aaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaag 52236818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25535052 - 25534890
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaagg-acgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| |||| || |||||||||||||||||    
T  25535052 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatataatttaggggacgattttgttcgattt 25534953  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || ||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||    
T  25534952 aaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagcc 25534890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2044432 - 2044271
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||    
T  2044432 actaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactccaaaaaacatataatttatggacgattttgttcgattta 2044333  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || |||||||||| ||||||||||||||||  || |||||||||| |||||||||    
T  2044332 aaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaagcc 2044271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40275256 - 40275092
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| ||||||| |||||| ||||||| |||||||| |||||||||  |||| |||||| |||| |||||||||||||    
T  40275256 actaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgatt 40275157  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||||| || ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcca 40275092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 46013571 - 46013422
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| || || ||    
T  46013571 atttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatactttagggacgattttgttcgatttaaaagaggtatga 46013472  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |||||||||||||||||||||  |||| ||||||||||||||||||    
T  46013471 ccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 46013422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 30513883 - 30513724
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgca-aaaaacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| || |||| |||||| |||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||    
T  30513883 actaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagtttaag-acgattttattcgattt 30513785  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||    
T  30513784 aaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 52375488 - 52375325
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||| ||||||| ||||||| ||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  52375488 actaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaacatatagtttagggacgattttgttcaattta 52375389  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || || |||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  52375388 aaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaagccaa 52375325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43678669 - 43678831
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | |||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  43678669 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaacatatagtttatggacgattttgttcgattta 43678768  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||| || | ||||||  ||||||||||| ||||||||  ||||||||||||||||||||||||    
T  43678769 aaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcca 43678831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51828701 - 51828539
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  51828701 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgattt 51828602  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || || ||||| |||||| | ||||||||||||  |||||||||||||||||||||||    
T  51828601 aaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagcc 51828539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38535680 - 38535841
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  38535680 actaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgattta 38535779  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |||| |||| | |||||| ||||||||||||||   ||||||||||| ||||||||||    
T  38535780 aaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaagcc 38535841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 49720532 - 49720371
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||| |||||| ||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||||||    
T  49720532 actaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgtatactttagggacgattttgttcgattta 49720433  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||||||||||||||||||||  |||| ||||||||||||||||||    
T  49720432 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 49720371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51473016 - 51472855
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||| |||||||| ||||||    
T  51473016 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacaattttgtttgattta 51472917  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||  | |||| ||||||||||||||||  |||||||||||| ||||||||||    
T  51472916 aaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaagcc 51472855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 44676633 - 44676470
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| | |||||||||||||||||||| |||||||  |||||||||||||||||||| ||||| ||||||||||||||    
T  44676633 actaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaacatatagtttagggacggttttgttcgattta 44676534  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || || || || |||| |||||| |||||||||  |||||||||||||||||||||||||    
T  44676533 aaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagccaa 44676470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14654576 - 14654735
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||||||||| ||||||| |||||||| |||||||||||||  ||||| ||||||||||||||||||||    
T  14654576 actaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaacata--gtttacggacgattttgttcgattta 14654673  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||  ||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  14654674 aaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 14654735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 32730550 - 32730392
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | |||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||| |||||    
T  32730550 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaacatatagtttagggacgattttgttcaattta 32730451  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || |||||||| ||||  |||||||||||||||  ||||||||||||||||||||    
T  32730450 aaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaa 32730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 16689492 - 16689352
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 127  Q
    |||||| |||||||||| |||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| |||||||||||    
T  16689492 tggagtcggaaatagggtgataggactaaaactgcaaaaaacatatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagtt 16689393  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    |||||||||| ||||||||||| ||||||||| || |||||    
T  16689392 ggtcaaaatgctaggaccaaaactgtaattaaacctatttt 16689352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34105033 - 34105190
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa--aacatatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| || ||||||||||| ||||||  |||||||| |||||||  ||||||||||||| ||||||||||||||||||    
T  34105033 actaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 34105132  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 156  Q
    ||||| ||  |||||||  ||||| ||||||||||||||  |||||||||||||||||    
T  34105133 taaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 39010213 - 39010075
Alignment:
Q  24 tttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 123  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||| || |||||||||||||||||| || || || || ||| |||    
T  39010213 tttatggagttgaaaatagggagatgtgactaaaactgcaaaaaacatacagtttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtg 39010114  T
Q  124 agttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||  |||||||||| ||||||||||||    
T  39010113 agttggtcaaaatgcaaggaccaaaaatgtaattaagcc 39010075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 36701493 - 36701640
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| || |||| |||||||| ||||||| || ||||||||||| |||||||||||| |||||||| ||| ||||||||||||||| ||| ||| | |    
T  36701493 atttctatgtgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatttgaaagagacatg 36701591  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||    
T  36701592 accattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 49407955 - 49407796
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||||| |||||| ||||||| |||||||| ||||||| || ||||||||||| || | |||||||| |||||| ||||| |||||||| |||| |    
T  49407955 ctaaaattgtcatttctctgcgtttttggagttgaaaatagg-aggtatgactaaaactgtacaaaacataaagtttagggacggttttgttctatttga 49407857  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || ||  | ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  49407856 aagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 49407796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 41998643 - 41998774
Alignment:
Q  30 gagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttg 128  Q
    |||||| |||||||||| || |||||||| ||||||||| ||||||||| | ||||||||||||||||||||||| || |||||||| |||||| |||||    
T  41998643 gagttgaaaatagggag-taggactaaaactgcaaaaaaacatatagtt-agggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttg 41998740  T
Q  129 gtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||  |||||||||||||||||||||||    
T  41998741 gtcaaaatgcaaggaccaaaagtgtaattaagcc 41998774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 50900925 - 50901073
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||||| |||||||||||||||| ||||||| || || ||| |||| |||||||||||||||||||| ||||| |||||||||||||  || ||  |||     
T  50900925 atttctttgcgtttatggagttgaaaatagg-aggtaggacaaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgtaagaggcaggg 50901023  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| ||||| |||||||||||  |||||||||||||||||||||||    
T  50901024 ccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 50901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 27200089 - 27200237
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| ||||||| |||||||| ||||||| || ||||||||||| |||||||||||| |||||||| ||||| | ||||||||||| ||| ||  ||     
T  27200089 atttctctgcgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggacggtattgttcgatttgaaagaggcaga 27200186  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  27200187 accattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 27200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43222551 - 43222388
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaa-tagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||| ||||| |||||||| ||| ||||| | || || ||||| |||||||||||||||||||| |||||||||||||||||||    
T  43222551 actaaaactgtcatttttgtacgtttctggagttgaaaaataggggg-taggattaaaaatgcaaaaaacatatagtttagggacgattttgttcgattt 43222453  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||| ||| |  || |||||||||||||||||||||||  | ||||||||  |||||||||||||    
T  43222452 aaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaagccaa 43222388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 55192277 - 55192116
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| |||||| ||||||| |||||||| ||||||| || || |||||||| | |||||||||||||||||| ||||| ||||||| ||||| |    
T  55192277 ctaaaactgtcatttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactacaaaaaacatatagtttatggacggttttgtttgatttga 55192179  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    || ||    ||||||||||||||| |||||||||||   |||| |||||||||||||||||||    
T  55192178 aagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagccaa 55192116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 39010468 - 39010554
Alignment:
Q  63 aaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    ||||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| |||||    
T  39010468 aaaaaacatacggattaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43222774 - 43222935
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaa-tagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||| ||||||||| |||||||| ||| ||||| | |  |||||||| ||||||||| |||| |||||| ||||||||||||||||||    
T  43222774 actaaaactgtcatttttgtgcgtttctggagttgaaaaataggggg-tgggactaaaactgcaaaaaaacataaagtttagggacgattttgttcgatt 43222872  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||| ||  | ||||||||||||| | | |||||||||  |||||||||||||| |||||||    
T  43222873 taaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaagc 43222935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 37075837 - 37075687
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa---catatagtttaaggacgattttgttcgatttaaaaaagata 109  Q
    |||||| ||||||| |||||||| ||||| | || || |||||||| |||||||||   ||||||||||| |||||  |||||| ||||| ||| ||  |    
T  37075837 atttctctgcgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaaaaaacatatagtttagggacgggtttgtttgatttgaaagaggca 37075739  T
Q  110 ggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  37075738 ggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 36701206 - 36701106
Alignment:
Q  63 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||||||| |||||||| ||||||||||||||||||| ||| ||  | || ||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  36701206 aaaaaacatgatagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagc 36701107  T
Q  162 c 162  Q
    |    
T  36701106 c 36701106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 33412609 - 33412700
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| ||||||||||||||||||  ||| ||| || |||||||||||||| || ||||||||  |||||||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaagcc 33412700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 27199801 - 27199705
Alignment:
Q  63 aaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||  |||| ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  |||||||||| |||||||||    
T  27199801 aaaaaacatatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 37076109 - 37076219
Alignment:
Q  51 gactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    |||||||| || ||||||||| |||||||| ||||||||||||||||||| ||| ||   |||||||||||||||| || ||||||||  ||||||||||    
T  37076109 gactaaaaatgtaaaaaacatgatagttta-ggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaa 37076207  T
Q  150 gtgtaattaagc 161  Q
     |||||||||||    
T  37076208 atgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 49408180 - 49408326
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-cat-atagtttaaggacgattttgttcgatttaaaaaagatag 110  Q
    |||||| ||||||| |||||||| ||||   ||| || |||||||| ||||||||| ||| |||||||| ||||  ||||||||||||| ||| ||| |     
T  49408180 atttctttgcgtttctggagttgaaaat---gaggtaggactaaaactgcaaaaaaacatgatagttta-ggacagttttgttcgatttgaaagagacac 49408275  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
     |||||||||||||| |||||||||||  || |||||||||||||||||||    
T  49408276 aaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaagc 49408326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 8874133 - 8874234
Alignment:
Q  63 aaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||| ||| | ||||||||||||||||| |   ||||||||||||||||| ||||||||| |   |||  |||||||||||||| ||    
T  8874133 aaaaaacatatagtttagggaaggttttgttcgatttaaaagaagcaggaccattttcgtgagctggtcaaaacgcggggatgaaaagtgtaattaaacc 8874232  T
Q  163 aa 164  Q
    ||    
T  8874233 aa 8874234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 12141128 - 12141241
Alignment:
Q  54 taaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtg 152  Q
    ||||| |||||||||||| ||||||||  || | ||||||||||||| ||| || ||||||||||| |||||  || | ||||||  |||| ||||||||    
T  12141128 taaaactgcaaaaaacatgatagtttagagatggttttgttcgatttgaaagaggtaggaccatttacgtgatctgataaaaatgcgaggaacaaaagtg 12141227  T
Q  153 taattaagccaatt 166  Q
    ||||||||||||||    
T  12141228 taattaagccaatt 12141241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 50900644 - 50900534
Alignment:
Q  51 gactaaaattgc-aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaa 148  Q
    |||||||| ||| ||||||||| |||||||| ||||| ||||||||||||| ||| || |||||||||||||||||| || |||||||   | |||||||    
T  50900644 gactaaaactgcgaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaa 50900546  T
Q  149 agtgtaattaag 160  Q
    ||| ||||||||    
T  50900545 agtttaattaag 50900534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 5137365 - 5137526
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| ||||||| ||||   ||||||| |||||||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |  || |||| |||| ||||| || |||||    |||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5137526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 8873850 - 8873694
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-cat-atagtttaaggacgattttgttcgattt 99  Q
    |||||| ||| |||||| ||||||| || ||||| ||||||| || || |||||||| ||||||||| ||| |||| ||| | ||| |||||||||||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-aggtaagactaaaactgcaaaaaaacatgataggttatg-acggttttgttcgattt 8873753  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||| | |||||||||||| |  || ||||||||  |||||||||| |||||||||    
T  8873752 aaaagagacatgaccattttcgtaaactgatcaaaatgcgaggaccaaaa-tgtaattaa 8873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 2323517 - 2323382
Alignment:
Q  23 gtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 121  Q
    |||| |||||||| ||||||| || || ||||||||||||||||||||| ||||||| |||| | ||||||||||||| ||| ||  || |  ||||| |    
T  2323517 gtttctggagttgaaaatagg-aggtaggactaaaattgcaaaaaacatgatagttt-aggatggttttgttcgatttgaaagaggcagtataatttttg 2323420  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||  |||||||||||  ||||| |||| |||||||||    
T  2323419 tgaactggtcaaaatgcgaggacaaaaaatgtaattaa 2323382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 37847206 - 37847328
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||||||| |||||| ||| ||| || ||||| ||||||| ||||| |||||||| |||||||| ||| |||||||| |||||  ||||||||||||     
T  37847206 ctaaaattgtcatttctctgcatttctgaagttgaaaatagg-agataggactaaaactgcaaaaa-catgatagtttagggacggctttgttcgatttg 37847303  T
Q  101 aaaaagataggaccattttcgtgag 125  Q
    ||| ||  | |||||||||| ||||    
T  37847304 aaagaggcaagaccattttcctgag 37847328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 20840635 - 20840560
Alignment:
Q  87 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| |||| ||||||  ||||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  20840635 ttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20840560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 20840956 - 20841106
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| ||||||||||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || ||||||  ||||||||  ||| ||||||  |||    
T  20840956 atttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcagg 20841055  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |||||||||| || |||||    || ||||||||||||||||||||    
T  20841056 accagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcc 20841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 23644515 - 23644462
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| |||||||||| || ||||||   |||||||||||||||||||||||    
T  23644515 aggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 23644462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 30104535 - 30104482
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| |||||||||| ||||||||    |||||||||||||||||||||||    
T  30104535 aggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 30104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 39556039 - 39556124
Alignment:
Q  79 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||||||    
T  39556039 aaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 39556124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 25612447 - 25612519
Alignment:
Q  87 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |||| |||| |  ||||||| |||||||||| ||||||||    ||||||||||||||||||||    
T  25612447 ttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7732872 - 7733033
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7732872 actagaattgttatttctgtgcatttatggagttgaaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 7732971  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7732972 aaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 7733033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9181693 - 9181529
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9181693 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacgattttgttcgattta 9181594  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9181593 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaggcaat 9181529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 25637583 - 25637741
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25637583 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 25637682  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637683 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 48247976 - 48248138
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  48247976 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 48248075  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48248076 aaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 48248138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15712526 - 15712366
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | |||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  15712526 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaatatatagtttaaggacgattttgttcgattta 15712427  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15712426 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 27245601 - 27245748
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  27245601 atttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaatacatataatttaaggacgattttgttcgatttaaaaaagatagga 27245700  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  27245701 ccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaag 27245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14311672 - 14311830
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  14311672 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaagacgattttgttcgattta 14311771  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||||    
T  14311772 aaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 5745800 - 5745642
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  5745800 actaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaacatatagtttaagaaagattttgttcgattta 5745701  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5745700 aaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16081460 - 16081299
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  16081460 actaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaacaaatagtttaaggacgattttgttcgattta 16081361  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||    
T  16081360 aaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaagcc 16081299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 786944 - 786782
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||  ||||||||||||||    
T  786944 actaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgattt 786845  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| || |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  786844 aaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagcc 786782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7732649 - 7732488
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7732649 actaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 7732550  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||||||||||| ||||||||  |||||||||| ||||||||||||    
T  7732549 aaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagcc 7732488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 16917833 - 16917713
Alignment:
Q  42 gggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtag 141  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16917833 gggagatatgactaaaactgcaaaaaacatatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtag 16917734  T
Q  142 gaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||    
T  16917733 gaccaaaagtgtaattaagcc 16917713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 28687742 - 28687591
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||| || ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |    
T  28687742 atttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaaatatagtttaaggacgattttgttcgatttataaaagatagaa 28687643  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  28687642 ccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagccaa 28687591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 26026703 - 26026861
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  26026703 actaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaacatatagtttaaggatggttttgttcgattta 26026802  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  26026803 taaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16081684 - 16081845
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  16081684 actaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggatgattttgttcgattta 16081783  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || ||||| || |||||||||||||||||||||  ||||||||| |||||||||||||    
T  16081784 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaagcc 16081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11971499 - 11971334
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattg----caaaaaacatatagtttaaggacgattttgttcga 96  Q
    ||||||| ||| |||| |||| |||| | || ||||||||||||||||| |||||||| ||     ||||||||||||||||||||||||||||||||||    
T  11971499 actaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaaggacgattttgttcga 11971400  T
Q  97 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11971399 tttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagcc 11971334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 35161198 - 35161342
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| || ||||    
T  35161198 atttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagg 35161297  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || ||||||||||||||||||  |||||||||||||||||    
T  35161298 accaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 27245353 - 27245201
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||||| ||||  ||||||||||||||||||||||| || ||||    
T  27245353 atttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgatttaaaagaggtagg 27245254  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  27245253 accaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaa 27245201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 5334014 - 5333880
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtt 127  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||    
T  5334014 tggagtaggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagtt 5333915  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||  |||| ||||||||||||||||||    
T  5333914 ggtcaaaatgcaaggatcaaaagtgtaattaagcc 5333880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26048332 - 26048493
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||    
T  26048332 actaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgcaaaa-acatatagtttaaggacaattttgtttgattta 26048430  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||| || |||||||| ||||||||||||||||||| |  |||| |||||||||||||||||||    
T  26048431 aaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagcca 26048493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 28687884 - 28688041
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28687884 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaacatatagtttagggacgattttgttcgattta 28687983  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||||||||||||||||||  |||||||||| |||||||||    
T  28687984 aaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2758083 - 2758244
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| | ||||||| ||||||| ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  2758083 actaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaacatatagtttatggacgattttgttcgattta 2758182  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || ||| |||||||||||||||||  |||||||  |||||||||||||||||||||||    
T  2758183 aaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaagcc 2758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 25637357 - 25637197
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaa 101  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||||||||||||    
T  25637357 taaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaa 25637258  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || || |||||||| |||| |||||||||||| |||  |||||||||||||||||||||||    
T  25637257 aagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagcc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 48247752 - 48247587
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca----tatagtttaaggacgattttgttcga 96  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |    |||| |||| ||||||||||||| ||    
T  48247752 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagggacgattttgtttga 48247653  T
Q  97 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| || |||||||| |||||||||||| ||||||||  |||||||||||||||||||||||    
T  48247652 tttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 48247587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26026479 - 26026320
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  26026479 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgattt 26026380  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| ||||||||| ||||||||||   ||||||||||||||||||||    
T  26026379 aaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5746024 - 5746186
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgc--aaaaaacatatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||| ||||||||||||    
T  5746024 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatggacggttttgttcgatt 5746123  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| ||  | || || ||||||||||| |||||||||  |||||||||||||||||||||||    
T  5746124 taaaagaggca-gatcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaagcc 5746186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24929688 - 24929856
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca-----tatagtttaaggacgattttgttcg 95  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |     ||||||||| ||||||||||||| |    
T  24929688 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttagggacgattttgtttg 24929787  T
Q  96 atttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||||| || || ||||| |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  24929788 atttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaa 24929856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 39388669 - 39388813
Alignment:
Q  18 tgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagataggaccat 116  Q
    ||||||||| |||||||| ||||||||||||| |||||||| ||||||| |||||||||||||  |||||||||||||||||||||| || |||||| |     
T  39388669 tgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagagacgattttgttcgatttaaaagaggtaggacaaa 39388768  T
Q  117 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  39388769 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9181794 - 9181958
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| || ||||   ||||||||||||| |||||||||||||||||    
T  9181794 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttagggacgattttgttcgat 9181893  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| || || || || |||||||| ||||||||||||  |||| ||||||||||||||||||    
T  9181894 ttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagcc 9181958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34595157 - 34595318
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |||||||| ||||| || | ||  ||||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  34595157 actaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaaaaa-catgatagtttagggacgattttgttcgattt 34595255  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |   |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  34595256 aaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 34595318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 5334254 - 5334363
Alignment:
Q  51 gactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaag 150  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||||||| || |||||| |||||||||||||||||||||||  |||||||||||    
T  5334254 gactaaaactgcaaaaaatatatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaag 5334353  T
Q  151 tgtaattaag 160  Q
    ||||||||||    
T  5334354 tgtaattaag 5334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 9394117 - 9394274
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| |||||| || |||| || ||||||||||||| ||||| |||||||| ||||||||| |||||||||| ||||| ||||||||||||| |    
T  9394117 ctaaaactgtcatttctttgtgtttttgaagttggaaatagg-agataggactaaaactgcaaaaaatatatagtttagggacggttttgttcgatttga 9394215  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||| |||||||||||| ||||| |||||||||||  | ||||||||||||||||||||    
T  9394216 aaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaagc 9394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26048109 - 26047960
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaa-aaaacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| ||| |          ||| |||||||||||||||||||| ||||| ||||||||    
T  26048109 actaaaactgtcatttctgtgcgtttctggagttggaaatagggacatagg----------caacaaaacatatagtttaaggacaattttattcgattt 26048020  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  26048019 aaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 11973787 - 11973945
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| || ||||||||||||| |||||  ||||||| |||||||| ||| || |||| |||||||||||||| |||||    
T  11973787 actaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgcaaaaaccatttaatttagggacgattttgttcaattta 11973886  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||| |||| ||||||  |||||||||||||  |||||||||| |||||||||    
T  11973887 aaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 787179 - 787329
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaa----aaacatatagtttaaggacgattttgttcgatttaaaaaagat 108  Q
    |||| ||||||||| |||||||| ||||| | ||||| |||||||| | ||||    ||||| |||||||| ||||||||||||||||||||||| || |    
T  787179 atttatgtgcgtttctggagttgaaaatatgaagataagactaaaactacaaattaaaaacaaatagtttagggacgattttgttcgatttaaaagaggt 787278  T
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||||||||||   || |||||||||||||||||    
T  787279 aggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 14311477 - 14311317
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattg-caaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| |||| ||||||||||||||||||||||||||| || ||||| ||  ||||||||||||||||| |||||||||| ||| ||||    
T  14311477 actaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggacgattttattcaattt 14311378  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||| || ||  |||| |||  ||||||||| ||||||  || ||||||| | ||||||||    
T  14311377 aaaagaggtataaccaattttatgagttggttaaaatgcaagtaccaaaaatataattaag 14311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 35160746 - 35160660
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaaga--taggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 155  Q
    |||| |||||| ||||||| ||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||||    
T  35160746 tataatttaagaacgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 39136776 - 39136686
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| ||||||||||||||||||| ||| ||  || |||||||||||||| |||||||||||  |||| ||||||||||||||||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagcc 39136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 4477844 - 4477700
Alignment:
Q  20 tgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattt 118  Q
    ||||||| ||||||| ||||   |||| || |||||||| |||||||| ||| |||||||| |||||||||| ||| |||||||| ||   |||||||||    
T  4477844 tgcgtttctggagtttgaaaataggaggtaggactaaaactgcaaaaa-catgatagtttagggacgattttattcaatttaaaagaggcgggaccattt 4477746  T
Q  119 tcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||| ||||||||||||  |||| ||| ||||||||||||||||    
T  4477745 tcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagccaa 4477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 35579272 - 35579430
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| |||||||||  ||||||| | |||||| ||||||| || ||||||||||| |||||||||||| |||||||| ||||| ||||||| |||||     
T  35579272 ctaaaactgttatttccctgcgtttttagagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggacggttttgtttgatttg 35579369  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||| ||  |  | |||||||||||| || ||||||||  |||| |||||||||||||||||    
T  35579370 aaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagc 35579430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 39136991 - 39137079
Alignment:
Q  74 agtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| ||||||||||||||||||||||| ||  |||||||||||||||||  |||||||||   |||| ||||||||||||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcc 39137079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 35579058 - 35578902
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| |||||||| |||||||  | || || ||||| |||||||||||| |||||||| | ||| |||||||||||||     
T  35579058 ctaaaaatgtcatttctctgcgtttctggagttgaaaataggatg-taggattaaaactgcaaaaaacatgatagtttatg-acggttttgttcgatttg 35578961  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||  |  ||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  35578960 aaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 33880970 - 33881132
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--cat-atagtttaaggacga--ttttgttcg 95  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||||| |||| |||||||| |||||||||  ||| |||||||| ||||||  |||||||||    
T  33880970 actaaaactgtcatttatgtgcgtttctggagttgaaaataggg-gataagactaaaactgcaaaaaaaacatgatagtttatggacgagattttgttcg 33881068  T
Q  96 atttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| |||| | | || |||||||||||||  | |||||||||  |||| |||||||| ||||||    
T  33881069 attgaaaacatacagaaccattttcgtgaactagtcaaaatgcgaggatcaaaagtgcaattaa 33881132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 49064167 - 49064034
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagt 126  Q
    |||||||| ||||||| || || |||||||| |||||||| ||| |||||||| ||| |||||||||| |||| ||| ||  |  ||||||||||||||     
T  49064167 tggagttgaaaatagg-agttaggactaaaagtgcaaaaa-catgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgtgagc 49064070  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||   |||||||||||||||||||||||    
T  49064069 tggtcaaaatacgaggaccaaaagtgtaattaagcc 49064034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 9393874 - 9393738
Alignment:
Q  23 gtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 121  Q
    |||| |||||||| ||||||| || || ||||||||  ||||||||||| |||||||| ||||| ||||||||||||| ||| ||  | ||| |||||||    
T  9393874 gtttctggagttgaaaatagg-aggtaggactaaaacagcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagaggcaagacaattttcg 9393777  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||| || ||||||||  |||| ||||||||||||||||    
T  9393776 tgagctgatcaaaatgcgaggatcaaaagtgtaattaag 9393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 5184543 - 5184488
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa 68  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||    
T  5184543 atttctgtgcatttttggagttggaaatagggagataagactaaaattgtaaaaaa 5184488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 40669689 - 40669756
Alignment:
Q  97 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||||||  || || ||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaaaccaa 40669756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 45815454 - 45815344
Alignment:
Q  51 gactaaaattgcaaaaaa-cat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaa 148  Q
    |||||||| ||||||||| ||| |||||||| ||||| ||||||||||||| ||| ||  | ||||||||||   || |||||||||||  |||||||||    
T  45815454 gactaaaactgcaaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaa 45815358  T
Q  149 agtgtaattaagcc 162  Q
    ||||||||||||||    
T  45815357 agtgtaattaagcc 45815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 2658989 - 2658839
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| |||| |||| |  |||    
T  2658989 atttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagg 2658890  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |||||||||| || |||||    ||||| |||||||||||||||||    
T  2658889 accagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcc 2658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 49064176 - 49064266
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||  |||||||||||||||||| ||| ||  | ||||||||||||||  ||| |||||||  |||| ||||||| ||||||||||    
T  49064176 atagtttattgacgattttgttcgatttgaaagagtcatgaccattttcgtgaactggccaaaatgtgaggatcaaaagtataattaagcc 49064266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 34594630 - 34594585
Alignment:
Q  115 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||    
T  34594630 attttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaag 34594585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 35160936 - 35160892
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaacata 72  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||    
T  35160936 tggagttgaaaatagggagataggactaaaattacaaaaaacata 35160892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 5184482 - 5184431
Alignment:
Q  108 taggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||||||||||||||||||||   |||||||||| |||||||||    
T  5184482 taggaccaatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaa 5184431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 33880732 - 33880622
Alignment:
Q  51 gactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    |||||||| ||||||||| || ||| |||| ||||| ||||||||||||| ||| ||  || || ||||| ||||| ||||||||||   ||||||||||    
T  33880732 gactaaaagtgcaaaaaatatgataatttagggacggttttgttcgatttgaaagaggcagaacaatttttgtgagctggtcaaaatacgaggaccaaaa 33880633  T
Q  150 gtgtaattaag 160  Q
     || |||||||    
T  33880632 atgcaattaag 33880622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 35288986 - 35288901
Alignment:
Q  79 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || ||||||   | |||||||||||||||||||||||    
T  35288986 aaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagccaa 35288901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28290029 - 28290190
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28290029 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 28290128  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28290129 aaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 28290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 8419008 - 8419165
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-atatagtttaaggacgattttgttcaatttaaa 8419106  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8419107 aaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19291518 - 19291354
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  19291518 actaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 19291419  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  19291418 aaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagccaa 19291354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 18149871 - 18149733
Alignment:
Q  24 tttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 123  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18149871 tttatggagttggaaatagggaaataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 18149772  T
Q  124 agttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  18149771 agttggtccaaatggtaggatcaaaagtgtaattaagcc 18149733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15029694 - 15029855
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||| |||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15029694 actaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 15029793  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15029794 aaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagcc 15029855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21371081 - 21371242
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21371081 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttagggacgattttgtttgattta 21371180  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||  ||||||||||||||||  |||| ||||||||||||||||||    
T  21371181 aaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 21371242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 38900793 - 38900648
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||| || |||||    
T  38900793 atttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatataatttagggacgattttgttcgatttaaaagaggtagga 38900694  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
     ||||||||||||||||||||||||  |||||||||||||||||||    
T  38900693 tcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 15115480 - 15115647
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | ||||||||||||||| ||||||||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  15115480 actaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaaa---tatagtttaaggacgattttgttcgattta 15115576  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc-aattttat 170  Q
    ||| || ||||||||||||||||||||||||||||||  |||| |||||||||||||||||| ||||||||    
T  15115577 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagcctaattttat 15115647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38901027 - 38901188
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||  ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38901027 actaaaactgtcatttatgtgcgtttctgg--ttggaaataaggagatataactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38901124  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||| | ||||||||||||||||  || |||||||||| |||||||||||||||||||||||||    
T  38901125 aaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagccaa 38901188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28289845 - 28289684
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| || |||||||||||| |||| ||||||||||||||||||||    
T  28289845 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacatataatttagggacgattttgttcgattta 28289746  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || ||| | |||||||||||||||||||||  |||| ||||||||||||||||||    
T  28289745 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 28289684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 39083521 - 39083361
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatata--gtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| ||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||| |||||  ||||||| || |||||||||||||    
T  39083521 actaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatatatatagtttaagaacaattttgttcgatt 39083422  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  39083421 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaag 39083361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32697608 - 32697771
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    |||||| |||| ||||||||| |||| ||||||||||||||||||| ||| ||||||| |||||||   ||||||||||||| |||||||| ||||||||    
T  32697608 actaaatttgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacatatagtttagggacgattctgttcgat 32697707  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||| || |||||||| |||||||||||||||||||||  | ||||||||||||||||||||    
T  32697708 ttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 4966973 - 4966819
Alignment:
Q  4 aaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    |||| ||| |||||||||| ||| | ||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  4966973 aaaactgtcatttctgtgcatttctagagttggaaataggg-gatatgactaaaactgctaaaaacatatagtttagggacgattttgttcgatttaaaa 4966875  T
Q  104 aagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||  || || |||||||||||||||||||||||  ||||||||||||||||||||    
T  4966874 gaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 4967166 - 4967317
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa--aacatatagtttaaggacgattttgttcgatttaaaaaagatag 110  Q
    |||| ||||||||| | ||||| |||||||||| ||| |||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| || ||     
T  4967166 atttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaa 4967265  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  4967266 gaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 4967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 18150120 - 18150279
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||    
T  18150120 atttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgatttaaaagaggtagg 18150219  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattttata 171  Q
    |||| ||||||||||| ||||||||   |||| || ||||||||||||||| | ||||||    
T  18150220 accaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagcctagtttata 18150279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 21370836 - 21370689
Alignment:
Q  20 tgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacata--------tagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||        |||||||| ||||||||||||||||||||||||||||      
T  21370836 tgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaaaataaaaaataatagtttaaagacgattttgttcgatttaaaaaagatata 21370737  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||| ||||||||||||| ||||||| |||| | |||||||    
T  21370736 accattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 16752730 - 16752582
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||||| |||||||||||||||| ||||||| || |||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||| |   | ||    
T  16752730 atttctttgcgtttatggagttgaaaatagg-aggtatgacaaaaactgcaaaaaacatatagtttatggacgattttgttcgatttgaaagaagcatga 16752632  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
     |||||||||||| |||||||||||   ||||||||||||||||||||||    
T  16752631 tcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaagcc 16752582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 14340478 - 14340401
Alignment:
Q  82 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 10721945 - 10721787
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| | ||||| |||||||| ||||||| || || |||||||| |||||||||||| |||||||| |||||||||||||||||||     
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttg 10721848  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||| ||| | ||||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  10721847 aaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagc 10721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14340792 - 14340953
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca---tatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||||| | ||||| |||||||||||||| ||||||| |||||||| | ||||||| |   ||||||||| |||||||||||||||||    
T  14340792 actaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaaaaaatatatagtttatggacgattttgttcgat 14340891  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| |  || ||||| |||||||||||||||||||||  || ||||||| |||||||||    
T  14340892 ttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 5161744 - 5161620
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||| ||||||| || ||||||||||||| ||||| |||||||| ||||||||| |||||| ||||| ||| ||||||||||||||    
T  5161744 actaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaaaacatataatttaaagacaattttgttcgattt 5161645  T
Q  100 aaaaaagataggaccattttcgtga 124  Q
    |||||||||| ||| ||||||||||    
T  5161644 aaaaaagatatgacaattttcgtga 5161620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 27307220 - 27307061
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| |||||||| ||||||| || || |||||||| |||||||||||| |||||||| ||| |||||||||| ||||     
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttta-ggatgattttgttcaatttg 27307123  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| | | | |||||||||| | ||||||||||||||  || ||||||||||||||||||||    
T  27307122 aaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagcc 27307061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 5161983 - 5162115
Alignment:
Q  31 agttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 129  Q
    ||||| |||| |||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||| || || ||| | | || ||||||||    
T  5161983 agttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaagaggtatgactaatctcatgagttgg 5162082  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||  ||||  |||| ||||||||||||    
T  5162083 tcaaaatgcaaggataaaaaatgtaattaagcc 5162115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 28495003 - 28494845
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||||||| | |||| ||||||| |||||||| ||||||| || || |||||||| |||||||||||| |||||||| ||||  |||||||||||||     
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacagttttgttcgatttg 28494906  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||| ||  || ||||||||| |||  |||||||||||  ||||||||||||||||||||||    
T  28494905 aaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaagc 28494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 22651767 - 22651857
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| ||||||||||||||||||| ||||||  || |||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagcc 22651857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 41834445 - 41834605
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-cat-atagtttaaggacgattttgttcgattt 99  Q
    |||||| ||| |||||| |||||||   |||||| ||||||| || || |||||||| ||||||||| ||| |||||||| ||||| ||||||||||| |    
T  41834445 ctaaaactgtcatttctctgcgtttcaagagttgaaaatagg-aggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatct 41834542  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
     ||| ||  ||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  41834543 gaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 41834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 22651494 - 22651347
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||| ||||||||| |||||||| ||||| |||| || |||||||| |||||||| ||| |||||||||||| | ||||||| ||||||||| ||  | |    
T  22651494 atttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgcaaaaa-catgatagtttaaggatggttttgtttgatttaaaagaggcatg 22651396  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||| |||||| ||||||||||   || ||||||| ||||||||||    
T  22651395 accatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaag 22651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 27307444 - 27307605
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa---aacatatagtttaaggacgattttgttcgatt 98  Q
    |||||| ||| |||||| ||| ||| |||||||| ||||||| || || |||||||| | |||||   ||||||||||||| ||||| ||||||||||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggagttgaaaatagg-aggtaggactaaaactacaaaaaaaaacatatagtttatggacggttttgttcgatt 27307542  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    | ||| ||  || |||||||||||||  |||||||||||   ||||||||||| |||||||||    
T  27307543 tgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaagc 27307605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 32305977 - 32305843
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| || |||| |||||||| ||||| | || || |||||||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgattta 32305880  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatg 137  Q
    ||| || ||| || ||||||||||| || ||||||||    
T  32305879 aaagaggtagaacaattttcgtgagctgatcaaaatg 32305843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 20266371 - 20266458
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||||||||||||||||||| ||| ||| | |||||||||||| || ||||||||||   ||||||||||||| ||||||    
T  20266371 atagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 17260676 - 17260766
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| ||| | ||||||||||||| ||| || ||| | ||||||||||| ||||||||||||  ||||||||||||| |||||||||    
T  17260676 atagtttagggatggttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaagcc 17260766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 13557103 - 13557017
Alignment:
Q  51 gactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatg 137  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| ||||| ||| ||  | ||||||||||||||| |||||||||||    
T  13557103 gactaaaactgcaaaaaacatgatagtttaag-acgattttgtttgatttgaaagaggcatgaccattttcgtgagctggtcaaaatg 13557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 16753045 - 16753114
Alignment:
Q  91 gttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||||| ||| ||  || ||||||||||||||||||||||||||  | |||||||| ||||||||||    
T  16753045 gttcgatttgaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 28495296 - 28495377
Alignment:
Q  81 ggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |||||||||||||| ||| ||  | ||||||||||||||| ||||||||||     |||||||||||||||||||||    
T  28495296 ggacaattttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatatggagaccaaaagtgtaattaagcc 28495377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 164244 - 164189
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||| |||||||||| ||||||||    |||||||||||||||||||||||||    
T  164244 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccaa 164189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 5819421 - 5819479
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattt 167  Q
    ||||||| |||||||||| || |||||    ||||||||||||||||||||||||||||    
T  5819421 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaattt 5819479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 8647822 - 8647983
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||||||||||| ||||   | || |||||| |||| ||||| ||| || ||| || ||||||  ||||||||  |||     
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |  |||| || |||||||||| || |||||    |||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 24362328 - 24362381
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| |||||||||| || ||||||   |||||||||||||||||||||||    
T  24362328 aggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 24362381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 8647521 - 8647437
Alignment:
Q  79 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||||| |||||||||  ||| |||| |  ||||||| |||||||||| || |||||    ||||||||||||||||||||||||    
T  8647521 aaggaccattttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 8647437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 19359211 - 19359135
Alignment:
Q  87 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||||||| |||| |||| |  ||||||| |||||||||| || |||||    ||||||||||||||||||||||||    
T  19359211 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcca 19359135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 28595270 - 28595182
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||| ||||||||||||||| ||| ||| |   | ||||||||| || || ||||||||||   ||||||||||||| |||||||    
T  28595270 atagtttagggacgattttgttcgttttgaaagaagcatgaccatttttgtaagctggtcaaaatacgaggaccaaaagtgcaattaag 28595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 38008348 - 38008497
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008348 atttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 38008447  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008448 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 38008497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11539799 - 11539637
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11539799 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 11539700  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11539699 aaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 11539637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 20127898 - 20127736
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||||||| |||| ||||||||| ||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  20127898 actaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 20127799  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20127798 aaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagcc 20127736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6949613 - 6949451
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  6949613 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgattt 6949514  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  6949513 aaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagcc 6949451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33920996 - 33921158
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| | |||||||||||||||||||| |||||||| ||||||||| ||| |||||||| ||||||||||||||||||    
T  33920996 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgattt 33921095  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33921096 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 33921158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 43160397 - 43160557
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaa 43160496  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  43160497 aaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagcc 43160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 63118 - 62957
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||     
T  63118 actaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttt 63019  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  63018 aaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagcc 62957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4356141 - 4356302
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| |||  | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  4356141 actaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 4356240  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  4356241 aaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaagcc 4356302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16953098 - 16952935
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| | |||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||    
T  16953098 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 16952999  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16952998 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 16952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17061069 - 17060906
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| | |||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||    
T  17061069 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 17060970  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17060969 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 17060906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11540023 - 11540190
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  11540023 actaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 11540122  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    ||| || ||||||||||||||||||||||||||||||  | |||||||||| |||||||||| |||||    
T  11540123 aaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagcctatttt 11540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 42192401 - 42192238
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42192401 actaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 42192302  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  42192301 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaa 42192238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4809264 - 4809425
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||| ||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  4809264 actaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgactttgttcaattta 4809363  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4809364 aaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaagcc 4809425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20128122 - 20128283
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20128122 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgtttgattta 20128221  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||||||||||||| ||||||  |||||||||||||||||||||||    
T  20128222 aaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagcc 20128283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 38008110 - 38007950
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaa 101  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaa 38008011  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || || |||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  38008010 aagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 38007950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42192627 - 42192789
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  42192627 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgattt 42192726  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42192727 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 42192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44219805 - 44219644
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  44219805 actaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacatataatttaaggacaattttgttcgattta 44219706  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| ||||| |||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  44219705 aaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagcc 44219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 13399807 - 13399965
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  13399807 taaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaatatatagtttaaggacaattttgttcgatttaaa 13399906  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    | | ||| |||||||||||||||||||||||||||||||||| |||| || |||||||||    
T  13399907 agaaata-gaccattttcgtgagttggtcaaaatggtaggactaaaattgcaattaagcc 13399965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4355916 - 4355752
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  4355916 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 4355817  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaat 165  Q
    ||| || || ||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  4355816 aaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagccaat 4355752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 13315658 - 13315496
Alignment:
Q  1 actaaaattgttatttctgtgcgttta-tggagttggaaatagggagatatgactaaaattgcaaaaaa---catatagtttaaggacgattttgttcga 96  Q
    ||||||| ||| |||||||||| |||  |||||||||||||||||||||| |||||||| |||||||||   ||||||||||||||||||||||||||||    
T  13315658 actaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcga 13315559  T
Q  97 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13315558 tttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15551059 - 15551218
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| | |||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||  |||||||||||||||||||||||    
T  15551059 actaaaactattatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggacgattttgttcgattt 15551158  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15551159 aaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43216094 - 43216255
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||||||||| ||| ||||||||||||||| |||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  43216094 actaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaatatatagtttagggacgattttgttcgattta 43216193  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| ||||||||||||||||||| |  ||||| |||||||||||||||||    
T  43216194 aaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcc 43216255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16953319 - 16953479
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||  ||||||||||||||    
T  16953319 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacatttttgttcgattta 16953418  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||| || |||||||| |||| ||||||||||||||||  ||||||||||||||||||||||    
T  16953419 aaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16175734 - 16175892
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16175734 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 16175833  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    |||| || || ||||| |||||||||||||| ||||||  |||||||||||||||||||    
T  16175834 aaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32418318 - 32418159
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||      
T  32418318 actaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttagggacgattttgttcgatt-- 32418221  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||||||||||||||||||||  ||||||| |||||||||||||||    
T  32418220 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagcc 32418159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 44220028 - 44220191
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaataggg--agatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatt 98  Q
    ||||||||| | |||| ||| ||||| |||||||||||||||||  |||||||||||||| | |||||||||||||||||| ||||||||||||| ||||    
T  44220028 actaaaattatcatttttgtacgtttctggagttggaaatagggggagatatgactaaaactacaaaaaacatatagtttagggacgattttgtttgatt 44220127  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| || |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  44220128 taaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagcc 44220191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 5560161 - 5560051
Alignment:
Q  52 actaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagt 151  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5560161 actaaaactgcaaaaaatatatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagt 5560062  T
Q  152 gtaattaagcc 162  Q
    |||||||||||    
T  5560061 gtaattaagcc 5560051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 649676 - 649527
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| ||||||||| |||||||||||||||||||| |  ||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  649676 atttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagga 649577  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |||||| |||||||||| |||  |||||||||||||||||||||||    
T  649576 ccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaagcc 649527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15550835 - 15550676
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||| ||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  15550835 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 15550736  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || |||||||| |||||||||||||||| ||||  |||| |||||||||||||||    
T  15550735 aaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaa 15550676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4809040 - 4808882
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||| ||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  4809040 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaacatatagtttatggacgattttgttcgattta 4808941  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||||| || |||||||||||||||||||||  || || |||| |||||||||    
T  4808940 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 33920773 - 33920615
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||| ||||||| |||||||| ||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  33920773 actaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaatcatatagtttagggacgattttgttcgattta 33920674  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||||||||||||||||||  |||||||||| |||||||||    
T  33920673 aaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 32418550 - 32418692
Alignment:
Q  20 tgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccatttt 119  Q
    ||||||| | |||||||||||||||||||| || ||||| ||||||||| |||||||||||||||||||||||||||||||||| || ||| | || |||    
T  32418550 tgcgtttctagagttggaaatagggagataagattaaaactgcaaaaaatatatagtttaaggacgattttgttcgatttaaaagaggtagaatcaattt 32418649  T
Q  120 cgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||    
T  32418650 cgtgaattggtcaaaatgataggaccaaaagtataattaagcc 32418692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24140064 - 24140220
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| |||  ||||||| ||||||     ||||||||| ||||||||||||| ||||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaaa-----tatagtttatggacgattttgtttgattta 24140158  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| |||||||||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  24140159 aaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagcc 24140220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13399583 - 13399454
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  13399583 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttccattta 13399484  T
Q  101 aaaaagataggaccattttcgtgagttggt 130  Q
    ||| || || ||||| |||||||| |||||    
T  13399483 aaagaggtatgaccaatttcgtgaattggt 13399454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 43160171 - 43160012
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca-tatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||||   ||||||||| |||||||||||||||||||    
T  43160171 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattt 43160072  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  43160071 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 6949854 - 6949992
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaaaaca--tatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgag 125  Q
    ||||||| |||||| ||||||| |||||||| ||||||||| |  ||||||||| |||||||||||||| |||||||| |  |||||||| |||||||||    
T  6949854 tggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgag 6949953  T
Q  126 ttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  6949954 ttggtcaaaatgcaaggaccaaaagtgtaattaagccaa 6949992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 63343 - 63516
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa------aacatatagtttaaggacgattttgttc 94  Q
    ||||||| ||| |||| ||||||||| | |||||||||||||| ||||| |||||||| |||||||      ||||||||||||| |||||||||||||     
T  63343 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagtttagggacgattttgttt 63442  T
Q  95 gatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    ||||||||| ||||| ||||||||||||||||||||||||||   |||||||||| | ||||||| || |||||    
T  63443 gatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaaacctatttt 63516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 31797166 - 31797323
Alignment:
Q  4 aaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    |||| ||| |||||| ||||||| | |||||| ||||||| || || |||||||| |||||||||||||||||||| ||||| ||||||||||||| |||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgaaa 31797264  T
Q  104 aagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
     ||  | ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcc 31797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 649801 - 649881
Alignment:
Q  80 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaag 649881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 9330179 - 9330338
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||| || |||| |  ||||| ||||||| ||||| |||||||| ||||||| ||||||||||||  |||||||||||||||||||    
T  9330179 actaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggacgattttgttcgattt 9330278  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||| | |||||||||||||||||||||  ||||||||||||||||||||    
T  9330279 aaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 25336030 - 25336146
Alignment:
Q  47 atatgactaaaattgcaaaaaac-atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacc 145  Q
    |||||||||||| |||||||||  ||||| |||| ||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||  ||||||    
T  25336030 atatgactaaaactgcaaaaaaatatataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggacc 25336129  T
Q  146 aaaagtgtaattaagcc 162  Q
    |||||||||||||||||    
T  25336130 aaaagtgtaattaagcc 25336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 28143416 - 28143575
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| |||||||| |||||||  | || |||||||| |||||||| ||| |||||||| |||||||||||||||||||     
T  28143416 ctaaaactgtcatttctctgcgtttctggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgatttg 28143513  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| ||  ||||||||||||||||| |||||||||||  ||||||||||||| |||||||||    
T  28143514 aaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcc 28143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5560935 - 5561023
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattt 89  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  5560935 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattt 5561023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 14942241 - 14942392
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--cat-atagtttaaggacgattttgttcgatttaaaaaagata 109  Q
    |||||| ||| ||| |||||||| |||||||  | || |||||||| |||||||||  ||| ||| |||| |||| |||||||||||||| ||| ||| |    
T  14942241 atttctctgcatttctggagttgaaaataggatg-taggactaaaactgcaaaaaaaacatgataatttatggacaattttgttcgatttgaaagagaca 14942339  T
Q  110 ggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
     ||||||||||||||| |||||||||||  | |||||||||||||||||||||    
T  14942340 agaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagcc 14942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 20495301 - 20495196
Alignment:
Q  55 aaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    |||| ||||||||| || |||||||| ||||||||||||| ||||||||| ||  | || ||||||||||||||||||||||||  || ||||||||||     
T  20495301 aaaagtgcaaaaaatatgatagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtga 20495202  T
Q  154 aattaa 159  Q
    ||||||    
T  20495201 aattaa 20495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 5035978 - 5035903
Alignment:
Q  48 tatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 122  Q
    ||||| ||||| ||||||||| || |||||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  5035978 tatgattaaaactgcaaaaaatatgatagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgt 5035903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 2190536 - 2190612
Alignment:
Q  76 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtg 152  Q
    |||| ||||||||||||||||||| ||||||  ||||||| ||||||||| |||||||||||  | |||||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 35779791 - 35779697
Alignment:
Q  79 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattttataac 173  Q
    |||||| |||||||||  ||| |||| |  ||||||||||||||||||  |||||||    |||||||||||||||||||||||||| |||||||    
T  35779791 aaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccaatattataac 35779697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43215870 - 43215805
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa 66  Q
    ||||||| ||| |||||| | ||||| |||||||| |||||||||||||||||||||| |||||||    
T  43215870 actaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgcaaaa 43215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 3823036 - 3822924
Alignment:
Q  48 tatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 146  Q
    |||||| ||||||||||||||||| ||||| || |||    |||||||| |||||||| |  |||| || |||| ||||||||| ||||||  |||||||    
T  3823036 tatgaccaaaattgcaaaaaacatgatagtatagggagtgctttgttcggtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggacca 3822937  T
Q  147 aaagtgtaattaa 159  Q
    |||||||||||||    
T  3822936 aaagtgtaattaa 3822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 3824143 - 3824251
Alignment:
Q  52 actaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaag 150  Q
    |||||||||||||||||||| ||||  || | ||  |||||||||||||||||| |  | ||||| |||||||||||||| ||||||  | |||||||||    
T  3824143 actaaaattgcaaaaaacatgatagcatatgaactgttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaag 3824242  T
Q  151 tgtaattaa 159  Q
    | |||||||    
T  3824243 tataattaa 3824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 9329892 - 9329833
Alignment:
Q  101 aaaaagataggaccattttcgtgagttgg-tcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||  |||||||||||||||| | |||||||| |||||||||||||||||||||    
T  9329892 aaaaagatataaccattttcgtgagttagatcaaaatgataggaccaaaagtgtaattaa 9329833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22445801 - 22445642
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa---catatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||| |||| |||| || ||||| |||||||||||||  ||||||| || ||||||   ||| || |||||||||| |||||||||||    
T  22445801 actaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactgtaaaaaaaaacat-taatttaaggacggttttgttcgat 22445703  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || | || ||||| |||  | ||||| ||||||| | | ||||||||||||||||||    
T  22445702 ttaataatggtatgaccaattttataagttgatcaaaat-gcaagaccaaaagtgtaattaa 22445642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 18450991 - 18450830
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| ||||||| ||||   |||| || |||||||| ||||||||| || ||| || ||||||  ||||||||  |||     
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |   |||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 28616998 - 28617159
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| || ||||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || |||||| |||||||||  |||     
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || || |||| |||||||||| || |||||    |||||||||||||||||||||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 9330030 - 9329980
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgca 63  Q
    |||||||||||||| | |||||||||||| ||||||| |||||||| ||||    
T  9330030 atttctgtgcgtttctagagttggaaataaggagataggactaaaagtgca 9329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 17023634 - 17023600
Alignment:
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||| ||||||||||    
T  17023634 ggtcaaaatggtaggaccaaaagtataattaagcc 17023600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 5561018 - 5561083
Alignment:
Q  94 cgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| || ||||| || ||||||||||| || ||||||  ||||||||||| ||||||||    
T  5561018 cgatttaaaagaggtaggatcaatttcgtgagttagttaaaatgcaaggaccaaaagggtaattaa 5561083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 20440523 - 20440576
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| ||||||||||||| |||||    |||||||||||||||||||||||    
T  20440523 aggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20440576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 20444802 - 20444749
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| ||||||||||||| |||||    |||||||||||||||||||||||    
T  20444802 aggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20444749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15256213 - 15256377
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| || |||||||   |||||||||||||||||||||||||||||||    
T  15256213 actaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 15256312  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15256313 ttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 15256377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 18049750 - 18049588
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaa 101  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaa 18049651  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18049650 aaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattgagccaa 18049588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 18428146 - 18428305
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  18428146 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 18428245  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18428246 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34799241 - 34799079
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  34799241 actaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgactttgttcgattt 34799142  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  34799141 aaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagcc 34799079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 41260403 - 41260271
Alignment:
Q  30 gagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 129  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41260403 gagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttgg 41260304  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||||||||||||    
T  41260303 tcaaaatggtaggaccaaaagtgtaattaagcc 41260271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9796887 - 9796724
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  9796887 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttatggatgattttgttcgattta 9796788  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || |||||||| ||| |||||||||||||||||  |||||||||||||||||||||||||    
T  9796787 aaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaa 9796724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 9797111 - 9797277
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| |||||  ||||||| ||||||| |||||||||||||||||||||||| || |||||    
T  9797111 actaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggacgattttatttgattt 9797210  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatt 166  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9797211 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaatccaatt 9797277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 599883 - 600044
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||| ||||||| |||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  599883 actaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttccattta 599982  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  599983 aaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaagcc 600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 28254587 - 28254427
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  28254587 actaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcaattt 28254488  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28254487 aaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaag 28254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5730978 - 5730817
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||| ||||| |||||||  |||||||||| || ||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  5730978 actaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaaacatatagtttaaggacgattttgtttgattta 5730879  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5730878 aaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 5730817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 2208876 - 2208716
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaac-atatagtttaaggacgattttgttcgattt 99  Q
    ||||||| | |||||||||| ||||| |||| ||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  2208876 actaaaactattatttctgtacgtttctggaattgaaaatagggagatatgactaaaattgtaaaaaaatatatagtttaaggacgattttgttcgattt 2208777  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2208776 aaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16578481 - 16578642
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| | | |||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||||||||     
T  16578481 actaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaacatatagtttaatgatgattttgttcgatttg 16578580  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16578581 aaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaagcc 16578642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28254811 - 28254971
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  28254811 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattatatagtttagggacgattttgttcgattta 28254910  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||| || |||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  28254911 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 42035933 - 42035773
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  42035933 actaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatatatagtttatggacgattttgttcgattta 42035834  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||| || ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  42035833 aaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 15255991 - 15255853
Alignment:
Q  24 tttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtg 123  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||    
T  15255991 tttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtg 15255892  T
Q  124 agttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  15255891 agttggtcaaaatgcaaggaccaaaagtgtaattaagcc 15255853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 35427197 - 35427358
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||| ||||||||||||||| ||||    
T  35427197 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatatataatttagggacgattttgttcggttta 35427296  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  35427297 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 35427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 7911001 - 7911164
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  7911001 actaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaatatatagtttagggacgattttgttcgattta 7911100  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| || ||| ||||||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  7911101 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagccaa 7911164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 599693 - 599532
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||    
T  599693 actaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacatataatttagggatgattttgttcgattta 599594  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || ||||| |||||||||||||||||||||  |||||||||| ||||||||||||    
T  599593 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 599532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 34799480 - 34799629
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||| || |||||    
T  34799480 atttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtagga 34799579  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |||||| | ||||||||||||  |||||||||||||||||||||||    
T  34799580 ccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaagcc 34799629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 18049978 - 18050134
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||| || |||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18049978 taaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaacatatagtttagggacgattttgttcgatttaaa 18050077  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | || || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  18050078 agaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 16578250 - 16578108
Alignment:
Q  20 tgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccatttt 119  Q
    ||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| |||    
T  16578250 tgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaacatataatttagggacgattttgttcgatttaaaagaggtaggaccaattt 16578151  T
Q  120 cgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||  || ||||||| ||||||||||||    
T  16578150 cgtgagttggtcaaaatgcaagaaccaaaaatgtaattaagcc 16578108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 41260646 - 41260807
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  41260646 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 41260745  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || || || |||||||||||| ||||||||  | |||||||||| ||||||||||    
T  41260746 aaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaagcc 41260807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 35694255 - 35694421
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca--------tatagtttaaggacgattttgt 92  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| ||||||||  |||||||| |        ||||||||||||||||||||||    
T  35694255 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaaaaaaaaaaaaatatagtttaaggacgattttgt 35694354  T
Q  93 tcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||  |||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  35694355 tcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 5731197 - 5731356
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  5731197 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 5731296  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
     ||||| ||| |||| |||| ||||||||||||||||  | ||| |||||| ||||||||    
T  5731297 taaaaggtagaaccaatttcctgagttggtcaaaatgcaatgacaaaaagtataattaag 5731356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6115495 - 6115657
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| | |||||| ||||| |||||||  ||||||| | ||||| ||||||||||||| |||||||||||||||||||    
T  6115495 actaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgattt 6115594  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || |||||||| ||||| ||||||||||||||   |||||||||||| ||||||||||    
T  6115595 aaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagcc 6115657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35694031 - 35693869
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatata--gtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||||| || |||||| |||||  ||||| |||||||||| |||||||    
T  35694031 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatggacgattttattcgatt 35693932  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||| || ||| | ||||||||| | ||||||||||||  |||| |||||||||||||||||    
T  35693931 taaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaagc 35693869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 26252958 - 26252811
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||   |    
T  26252958 atttctgagcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacgattttgttcgatttaaaagagatgtta 26252859  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| |||||||| || |||||  ||  | || ||||||||||||||||||    
T  26252858 ccaatttcgtgaattagtcaa--tgcaaagatcaaaagtgtaattaagcc 26252811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35426974 - 35426885
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgatttt 90  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||    
T  35426974 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaattgcaaaaaacatatagtttaaggaccatttt 35426885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7910778 - 7910616
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatat--gactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||| ||| | ||||| ||||||  |||||||  ||||||| | |||||||||||||| |||| ||||||||||||||||||    
T  7910778 actaaaactgtcatttctgtgcatttcttgagttagaaataaagagatataggactaaact-gcaaaaaacatataatttagggacgattttgttcgatt 7910680  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| || ||  ||||||||||||||||| ||||||||  |||||||||| ||||||||||||    
T  7910679 taaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagcc 7910616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42036156 - 42036318
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||| ||| |||||||||||||| |   ||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  42036156 actaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 42036255  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || || || ||||||||| ||||||||||||||  | ||  |||||| ||||||||||    
T  42036256 aaaagaggtaagatcattttcgtaagttggtcaaaatgcgaagatgaaaagtataattaagcc 42036318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 18674256 - 18674148
Alignment:
Q  54 taaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||  |  || |||| |||||||| ||||||||| ||  |||||||| |||||    
T  18674256 taaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgt 18674157  T
Q  154 aattaagcc 162  Q
    |||||||||    
T  18674156 aattaagcc 18674148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 28877276 - 28877432
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||||||| |||| | | ||||| |||||||  ||||||  || || ||||||||  ||||||||||| |||||| | |||| ||||||||| ||||     
T  28877276 ctaaaattgtcatttatatacgtttctggagttaaaaataga-aggtaggactaaaacagcaaaaaacatgatagtt-agggacaattttgttcaatttg 28877373  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||  ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  28877374 aaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 35426895 - 35426845
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35426895 aggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 18805322 - 18805167
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| |||||| || |||| |||||||| | ||||| || || ||||||||  | |||||||||||||||   ||||  |||||||||||||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggagttgaagatagg-aggtaggactaaaacaggaaaaaacatatagttctgggacagttttgttcgatttaa 18805224  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||| || |||||||||||||| | |||||||||   |||||||||||||||||||    
T  18805223 aagaga-agaaccattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaa 18805167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 9930112 - 9930202
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| |||||| ||||||||| |||| |||| |  ||||||| |||||||||| || ||||||   |||||||||||||||||||||||    
T  9930112 atagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 9930202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 28877002 - 28876910
Alignment:
Q  64 aaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 155  Q
    |||||||| |||||||| ||||||||||||||||||| ||| ||  || |  ||||||||||| || ||||||||  ||||||||||||||||    
T  28877002 aaaaacatgatagtttagggacgattttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaa 28876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 2617853 - 2617748
Alignment:
Q  55 aaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||||||||||||||| ||||| ||||||| | ||||||| |||| ||||||| | ||  | ||||||||   ||||||||||  ||||| |||| |||    
T  2617853 aaaattgcaaaaaacatgatagtataaggactactttgttcaatttgaaaaagacatgattaatttcgtgaaccggtcaaaatgcaaggacaaaaaatgt 2617754  T
Q  154 aattaa 159  Q
    ||||||    
T  2617753 aattaa 2617748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 11656841 - 11657002
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| || ||||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || |||||| |||||||||  |||     
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |   |||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11657002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 10047083 - 10047155
Alignment:
Q  64 aaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaa 135  Q
    |||||||| ||||||||  ||| |||||||||||||||||| | | | ||| |||||||||||||| ||||||    
T  10047083 aaaaacatgatagtttagagaccattttgttcgatttaaaagaaacaagactattttcgtgagttgatcaaaa 10047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35163859 - 35163815
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaataggga 45  Q
    ||||||| ||| |||||||||||||| | ||||||||||||||||    
T  35163859 actaaaactgtcatttctgtgcgtttctcgagttggaaataggga 35163815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 34555765 - 34555926
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa--aacatatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  34555765 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgatt 34555864  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34555865 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaag 34555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9992316 - 9992154
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  9992316 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggaccattttgttcgattta 9992217  T
Q  101 aaaaagataggaccattttcgtgagttggtc-aaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  9992216 aaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagcc 9992154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21938724 - 21938566
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  21938724 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 21938625  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21938624 aaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 37505229 - 37505067
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||| | ||| |||||||| ||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  37505229 actaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 37505130  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37505129 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 37505067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 30786921 - 30786771
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  30786921 atttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagga 30786822  T
Q  113 cc-attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || |||||||||||||||||||||||  || ||||||||||||||||||||    
T  30786821 ccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaagcc 30786771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16299067 - 16299227
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| | |||    
T  16299067 actaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttc-aatta 16299165  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||    
T  16299166 aaaaaaataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaagcc 16299227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10278935 - 10279094
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||| |||| |||||||||| ||| ||||||| |||||||| ||   ||||||||||||||||||||||||||||||||||||    
T  10278935 actaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg---aaaacatatagtttaaggacgattttgttcgattta 10279031  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10279032 aaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaagcca 10279094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 50305169 - 50305333
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca---tatagtttaaggacgattttgttcgattt 99  Q
    ||||| ||| |||| |||| ||||||||||||| |||||||||||||||||||||| ||||||||| |   |||||||||||||||||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaaggacgattttgttcgattt 50305268  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||    
T  50305269 aaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaaaccaa 50305333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 9992542 - 9992703
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| ||| ||||||  |||||| |||||||| ||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaacatatagtttaagcacgattttgttcgatttaaa 9992641  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||    
T  9992642 aaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagccaa 9992703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52335895 - 52336056
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  52335895 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaatatagtttagggacgattttgttcgattta 52335994  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||| |||| |||||||||||||||| ||| |||||||| |||||||||||    
T  52335995 aaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaagcc 52336056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44954611 - 44954771
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||    
T  44954611 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggatgattttgtttgattta 44954710  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||| || || ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  44954711 aaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 44954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 1837666 - 1837500
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  1837666 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacaattttgttcgattta 1837567  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattt 167  Q
    ||| ||||| || || |||||||||||| ||||||||  ||||||||||||||||||||||| ||||    
T  1837566 aaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcctattt 1837500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2868093 - 2868254
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| | || ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  2868093 actaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtgtagggacgattttgttcgattta 2868192  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || |||||||||||||||| |||||||||||||  |||| ||||||||||||||||||    
T  2868193 aaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaagcc 2868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23340344 - 23340181
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |  |||||||||||||||||    
T  23340344 actaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttatgagcgattttgttcgattta 23340245  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| ||||||||||| |||||||||||||||||||||  | || ||||||||||||||||||||    
T  23340244 aaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagccaa 23340181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 10278710 - 10278550
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||||||| |||| ||||||||| |||||||| |||| |||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  10278710 actaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 10278611  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||| || ||||| || |||||||||||||||||||||  |||||||||||||||||||||    
T  10278610 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44582218 - 44582059
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||| |||||||||||||||||||||| |  |||||| |||||||| ||||||||||||||| ||||  |||||||||||||||||||    
T  44582218 actaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaacatataatttagagacgattttgttcgattta 44582119  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||| || |||||||| |||||| ||||||||||||||  |||||||||||||||||||||    
T  44582118 aaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaag 44582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 8230026 - 8230184
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  8230026 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 8230125  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||  ||||||||||||| | ||||||||||  || ||||||| |||||||||    
T  8230126 aaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaa 8230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44954387 - 44954229
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||| || |||||| |||||||| ||||||||||||||| ||||| |||||||||||| ||||||    
T  44954387 actaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaaacatataatttaaagacgattttgttggattta 44954288  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||    
T  44954287 aaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4080182 - 4080021
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  4080182 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactgtaaaaaacatatagtttagggacgattttgttcgattta 4080083  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || || || ||||||||||||||||| |||  |||||||||||||||||| ||||    
T  4080082 aaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaattgagcc 4080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37421323 - 37421163
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  37421323 actaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 37421224  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || || ||||| |||||||| ||||||||||||  | ||||||||||||||||||    
T  37421223 taaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 443936 - 444103
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  443936 actaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaacatatagtttaggaacgattttgttcgattta 444035  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    ||| || || ||| | |||||||||||||||||||||  | || ||||||| ||||||||||||||||    
T  444036 aaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaagccaatttt 444103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 2868072 - 2867913
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||| || ||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  2868072 actaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaacatatagtttaacgacaattttgttcgattta 2867973  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||| ||||| || ||||||||||||||||||||||||  | |||||||| ||||||||||    
T  2867972 aaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 17641749 - 17641912
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-----atagtttaaggacgattttgttcg 95  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |      |||||||| |||||||||||||||    
T  17641749 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcg 17641848  T
Q  96 atttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  17641849 atttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 44582442 - 44582613
Alignment:
Q  1 actaaaattgttatttctgtgcgtttat-ggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||||||||||||| | |||| || ||||||||||| | |||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  44582442 actaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatt 44582541  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattttat 170  Q
    | |||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||    
T  44582542 tgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaagtcaatattat 44582613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 34555530 - 34555379
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--catatagtttaaggacgattttgttcgatttaaaaaagatag 110  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| || ||||||  ||||||||||| ||||||||||||||||||||||| || |||    
T  34555530 atttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtag 34555431  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
     |||| ||||| ||||| |||||||||  |||||||||||||||||||||||    
T  34555430 caccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaagcc 34555379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29439092 - 29438930
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| |||||||| |||| |||| | || ||| |||||| |||||| |||||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  29439092 actaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaacatttagtttagggacgattttgttcgattt 29438993  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || |||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  29438992 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 29438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 45048314 - 45048158
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| |||||||||| ||||||| |||||||| ||||| | || || |||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  45048314 ctaaaactgttatttctatgcgtttctggagttgaaaatatg-aggtaggactaaaactgcaaaaaacatatagtttatggacgattttgttcaatttaa 45048216  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || || ||| ||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  45048215 aagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 16298814 - 16298683
Alignment:
Q  30 gagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgg 129  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| || || ||||| |||||||||||||    
T  16298814 gagttggaaataggtagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgg 16298715  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||||||  ||| |||||| |||||||||||    
T  16298714 tcaaaatgcaagggccaaaaatgtaattaagc 16298683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 29439333 - 29439465
Alignment:
Q  28 tggagttggaaatagggagatatgactaaaattgcaaaa--aacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgag 125  Q
    ||||||| |||||||| ||||| |||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29439333 tggagtttgaaatagg-agataggactaaatctgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgag 29439431  T
Q  126 ttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| |||||||||| |||||||||||| ||||||    
T  29439432 ttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 37421388 - 37421488
Alignment:
Q  60 tgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa-aagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  37421388 tgcaaaaatcatatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaatta 37421487  T
Q  159 a 159  Q
    |    
T  37421488 a 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 30787245 - 30787344
Alignment:
Q  63 aaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  30787245 aaaaaacatatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagcc 30787344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37505453 - 37505615
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||| | ||||    
T  37505453 actaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaa-acatatagtttatggacgattttgtttgtttta 37505551  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||| ||||| || || ||||||||||||||||||||   |||||||||| | ||||||||||||    
T  37505552 aaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaagccaa 37505615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8229801 - 8229637
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa---catatagtttaaggacgattttgttcgat 97  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||   |||||||||||  ||||||||| ||||||    
T  8229801 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagagacgattttattcgat 8229702  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||| |  ||| | ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  8229701 ttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaagcc 8229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 39485224 - 39485068
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| || ||| || |||| || ||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  39485224 ctaaaactgtcatctctctgtgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttga 39485126  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || || |||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  39485125 aagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6224860 - 6224700
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatag--tttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||| |||||| |||||||| || |||||| |||||   |||||||||||||||||||||||    
T  6224860 actaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgatt 6224761  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||   || ||||||||  |||||||||||||||| ||||| ||||| |||||||||    
T  6224760 taaaaaaacaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaattaa 6224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 17641526 - 17641403
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||||||||  ||||||| | |||||||| ||||||||||| || |||||||||||||||    
T  17641526 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactacaaaaaacgtatagtttaagaacaattttgttcgattta 17641427  T
Q  101 aaaaagataggaccattttcgtga 124  Q
    |||||| || ||||||||||||||    
T  17641426 aaaaaggtatgaccattttcgtga 17641403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 1744488 - 1744330
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgc-aaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||| || || |     
T  1744488 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaatatatagtttagggacgattttatttgact- 1744390  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
     |||||| ||||| ||||| |||||||| ||||||||   | |||||||||||||||||||    
T  1744389 -aaaaaggtaggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaag 1744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 50926638 - 50926787
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||| |||| ||||||||||||| |||||||| |  | |||||||| |||||||||   |||||||| ||||| ||||||||||||| ||| |||  |||    
T  50926638 atttatgtgtgtttatggagttgaaaatagggggtaaggactaaaactgcaaaaaaatgatagtttagggacggttttgttcgatttgaaagagacggga 50926737  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||| |||||||||||  | |||||||||||||||||||||    
T  50926738 ccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagcc 50926787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 23526807 - 23526659
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    |||||||||||||| |||||||| |||||||| |    |||||||| |||||||||   ||||| || ||| ||||||||||||||||||| ||  ||||    
T  23526807 atttctgtgcgtttttggagttgaaaatagggggcagggactaaaactgcaaaaaaatgatagtctagggatgattttgttcgatttaaaagaggcagga 23526708  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||||||||||| |||||||||||  |||||||||||||||| |||||    
T  23526707 ccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagc 23526659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9833537 - 9833699
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||| |||||||||||||||||| |||||||| |||||||| | || |||||||| |||||||||||| ||| |||| |||||||||||||||||||    
T  9833537 actaaaaatgttatttctgtgcgtttctggagttgaaaataggg-ggtaggactaaaactgcaaaaaacataatattttagggacgattttgttcgattt 9833635  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
     ||| ||  | ||| |||||||||||||||||||| |   |||| |||||||  ||||||||||    
T  9833636 gaaagaggcatgactattttcgtgagttggtcaaagtacaaggatcaaaagtacaattaagcca 9833699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 50304532 - 50304441
Alignment:
Q  69 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||||||||  |||||||||||||||||||||| || || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 45048532 - 45048678
Alignment:
Q  12 tatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatag 110  Q
    ||||||| ||||||| |||||||| ||||||| || || |||||||| |||||||||||| |||||||| ||||| ||||||||||||  ||| || ||     
T  45048532 tatttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgattggaaagaggtat 45048629  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||  |||||||||||  ||||||||||||||||||||    
T  45048630 gaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 44802557 - 44802717
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||||||| |||| | || |||| |||||||| ||||||| || ||  ||||||| |||||||||||| |||||||| ||||||||||||||  |||     
T  44802557 ctaaaattgtcatttttctgtgtttctggagttgaaaatagg-aggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttg 44802655  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| ||  | ||||| ||||||||| |||||||||||  |||||||||||||||||||||||    
T  44802656 aaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 44802717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 17088526 - 17088685
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| ||| |||||| ||||||| | || ||| ||||||| || ||  ||||||| ||||||||| |||||||||| ||||| ||||||| ||||| |    
T  17088526 ctaaaactgtcatttctctgcgtttctagatttgaaaatagg-aggtagaactaaaactgcaaaaaatatatagtttagggacggttttgtttgatttga 17088624  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || ||  | ||||||||||||||| || ||||||||  |||||||||||||||||||||||    
T  17088625 aagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagcc 17088685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 29021252 - 29021411
Alignment:
Q  4 aaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat--atagtttaaggacgattttgttcgatttaa 101  Q
    |||| ||| |||| ||||||||| |||||||| |||||||| | || |||||||| ||||||||||    ||| |||| ||||||||||||||||||| |    
T  29021252 aaaactgtcatttatgtgcgtttctggagttgaaaataggggg-taagactaaaactgcaaaaaaccgtgataatttagggacgattttgttcgatttga 29021350  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || ||  | || |||||||||||| |||||||||||  ||||||||||||| |||||||||    
T  29021351 aagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagcc 29021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 50926381 - 50926232
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat--atagtttaaggacgattttgttcgatttaaaaaagatag 110  Q
    |||| |||| |||| |||||||| |||||||  |  | |||||||| ||||||||| |   |||||||| ||||||||||||||||||| ||| || ||     
T  50926381 atttatgtgtgtttctggagttgaaaataggaggtaaggactaaaactgcaaaaaaaaatgatagtttagggacgattttgttcgatttgaaagaggtat 50926282  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||  ||||||||||| |||||||||||| |||||||||| ||||||||||    
T  50926281 gattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 25274863 - 25274754
Alignment:
Q  55 aaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgta 154  Q
    |||| |||||||||||| ||||||| | ||| ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  ||||||||||||| |    
T  25274863 aaaaatgcaaaaaacatgtagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgca 25274764  T
Q  155 attaagccaa 164  Q
    |||| |||||    
T  25274763 attatgccaa 25274754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 29021029 - 29020878
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||| ||||||||| ||||| || |||||||||| ||  |||||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||| | |    
T  29021029 atttatgtgcgtttttggaggtgaaaatagggag-taacactaaaattgcaaaaaacatgataatttaaggatgattttgttcgatttaaaagagacatg 29020931  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||  |||| || |||||||   | ||||| | ||| |||||||||||    
T  29020930 accatttttatgagctgatcaaaatacgaagaccatatgtgcaattaagccaa 29020878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44291463 - 44291303
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa--cat-atagtttaaggacgattttgttcgat 97  Q
    ||||||| || ||||| ||||||||| |||| ||| ||| ||| || ||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  44291463 actaaaactgctattt-tgtgcgtttctggatttgaaaacagg-aggtatgactaaaactgcaaaaaaaacatgatagtttatggacgattttgttcaat 44291366  T
Q  98 ttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    || ||| ||  |  |||||||||||||| |||||||||||  ||||||||||||| |||||||    
T  44291365 ttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaag 44291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 23526965 - 23527074
Alignment:
Q  51 gactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaag 150  Q
    |||||||| |||||||||   ||||||||  |||| ||||||||||||||||||||  | |||||||||| |||| || ||||||||  |||| ||||||    
T  23526965 gactaaaactgcaaaaaaatgatagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagctgatcaaaatgtgaggatcaaaag 23527064  T
Q  151 tgtaattaag 160  Q
    | ||||||||    
T  23527065 tataattaag 23527074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 50304941 - 50304876
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa 68  Q
    ||||||||  |||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  50304941 taaaattgccatttttgtgtgtttatggagtttgaaatagggagatatgactaaaactgcaaaaaa 50304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 44291708 - 44291831
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| || |||| |||||||| |||||||| | || |||||||| |||||||||||| ||||||    ||||||||| |||||||||||| ||| | |    
T  44291708 atttctatgtgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacatgatagttaggtgacgattttattcgatttaaaagagacatg 44291806  T
Q  112 accattttcgtgagttggtcaaaat 136  Q
    ||||||||| |||| ||||||||||    
T  44291807 accattttcatgagctggtcaaaat 44291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 39843497 - 39843570
Alignment:
Q  89 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||| ||||||  ||||||| ||||||||||||||| |||||  |||||| |||||||||| |||||    
T  39843497 ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaataaagcc 39843570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 50419490 - 50419393
Alignment:
Q  63 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||  |||||| | |||||||||||| ||||||| | ||||||||| ||||||||||  |||||  ||||||||||||| ||||||    
T  50419490 aaaaaacatgatagtacaaggactactttgttcgatttgaaaaagacatgaccatttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaa 50419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 17088245 - 17088146
Alignment:
Q  63 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||| ||  |  |||||||||||||| |||||||||||  | |||||| |||||||||||||    
T  17088245 aaaaaacatgatagttta-ggacggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaagc 17088147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 50419698 - 50419806
Alignment:
Q  55 aaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    |||| |||||||||||| |||||  | ||||  |||||||| |||| ||||||  ||||||| ||||||||||||||| |||||  | |||||||||||     
T  50419698 aaaagtgcaaaaaacatgatagtacagggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgc 50419797  T
Q  154 aattaagcc 162  Q
    |||||||||    
T  50419798 aattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30787157 - 30787224
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa 68  Q
    ||||||| ||| |||||| ||| |||||||||||| ||||||||| ||| ||||||||||| ||||||    
T  30787157 actaaaactgtcatttctctgcatttatggagttgaaaatagggaaataggactaaaattgaaaaaaa 30787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 48173910 - 48173748
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-cat-atagtttaaggacgattttgttcgatt 98  Q
    ||||||| ||| |||| || | |||| |||||||| |||||||| | ||||||||||| ||||||||| ||| ||| |||| || |||||||||||||||    
T  48173910 actaaaactgtcatttatgagagtttttggagttgaaaataggggg-tatgactaaaagtgcaaaaaaacatgataatttagggtcgattttgttcgatt 48173812  T
Q  99 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    | ||| ||  || |||||||| ||||  |||||||||||   |||||||| ||  |||||||||    
T  48173811 tgaaagaggcagaaccatttttgtgaactggtcaaaatgcgtggaccaaaggtacaattaagcc 48173748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 36229406 - 36229486
Alignment:
Q  43 ggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgt 122  Q
    |||| ||||||||||| |||||||||||| ||||||||||||  | ||||||| |||||| | ||| | ||||||||||||    
T  36229406 ggaggtatgactaaaactgcaaaaaacatgatagtttaaggatcagtttgttcaatttaatagagacaagaccattttcgt 36229486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 52233853 - 52233733
Alignment:
Q  48 tatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggacca 146  Q
    |||||| ||||||||||||||||| ||||| || ||||   ||||||||| || |||| | ||| |||| |||||| ||||||| ||||    ||||| |    
T  52233853 tatgaccaaaattgcaaaaaacatgatagtatagggactgctttgttcgacttgaaaagggtagcaccaatttcgtaagttggttaaaacccgaggacga 52233754  T
Q  147 aaagtgtaattaagccaattt 167  Q
    |||||||||||||||| ||||    
T  52233753 aaagtgtaattaagcctattt 52233733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 29307326 - 29307493
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || ||||||  ||||||||  |||     
T  29307326 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29307425  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    |||| |  ||||||| |||||||||| ||||||||    ||||||||||||| |||||||||| ||||    
T  29307426 aaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagccactttt 29307493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 52235106 - 52235214
Alignment:
Q  55 aaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    |||||||||| |||||| ||||| || ||||   || ||||||||| |||| |  |||| || |||||||||||||| |||||   |||| |||||||||    
T  52235106 aaaattgcaagaaacatgatagtatagggactgcttcgttcgatttgaaaagggcaggatcagtttcgtgagttggttaaaatctgaggatcaaaagtgt 52235205  T
Q  154 aattaagcc 162  Q
    |||||||||    
T  52235206 aattaagcc 52235214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5114629 - 5114468
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5114629 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 5114530  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  5114529 aaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagcc 5114468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25472397 - 25472560
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||||||||||||| ||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  25472397 actaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 25472496  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25472497 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcca 25472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 24640582 - 24640728
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 112  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24640582 atttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 24640681  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||    
T  24640682 ccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 5120856 - 5121015
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaa 5120955  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    | || |||||  | |||||||||||||||||||||  |||||||||||||||||||||||    
T  5120956 agaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 5121015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 31574110 - 31574271
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31574110 actaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 31574209  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || ||| | |||||||||||||||||||||  |||||||||||||||||||||||    
T  31574210 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 31574271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 30251088 - 30251238
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaa-acatatagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| | |||||| ||| |||||||||||||||||||||||||||||||||||||| |    
T  30251088 atttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgattttgttcgatttaaaaaagatatg 30251187  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    || ||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  30251188 acaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaagcc 30251238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31073527 - 31073689
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||| |||| |||||||||||||||    
T  31073527 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacaattttgttcgattta 31073626  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||| || || ||||| ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  31073627 aaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcca 31073689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31573886 - 31573720
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa----catatagtttaaggacgattttgttcga 96  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||| |||||||| |||||||||    ||||||||||||| ||||||||||||||    
T  31573886 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 31573787  T
Q  97 tttaaaaaaga-taggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31573786 tttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 31573720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 29891477 - 29891630
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaag----at 108  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||     |     
T  29891477 atttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcaatttaaataaataaaaa 29891576  T
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  29891577 aggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 29891630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 25469010 - 25468852
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaa--aaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||| ||| |||||||||||||| |||| ||  ||||||||||||| |||||||| |||||  ||||||||||||||| ||||||||||||||||||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacatatagtttagggacgattttgttcgattta 25468911  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  25468910 aaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 28636435 - 28636287
Alignment:
Q  18 tgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccatt 117  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||| |  || ||||| |    
T  28636435 tgtgcatttatggagttggaaatagggagatatgactaaaactgcaaaaa-catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaat 28636337  T
Q  118 ttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattt 167  Q
    |||||||||||||||||||   | |||||||| |||||||||||||||||    
T  28636336 ttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaagccaattt 28636287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 31073290 - 31073137
Alignment:
Q  22 cgtttatggagttggaaatagggagatatgactaaaattgcaaaaaaca-tatagtttaaggac------gattttgttcgatttaaaaaagataggacc 114  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||      ||||||||||||||||||||||||||||||    
T  31073290 cgtttctggagttggaaataggaagatatgactaaaactgcaaaaaataatatagtttaaggacttaaacgattttgttcgatttaaaaaagataggacc 31073191  T
Q  115 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 168  Q
    |||||| || ||||||||||||   |||||||||||||||||||||||| ||||    
T  31073190 attttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagccattttt 31073137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29891241 - 29891080
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| ||||||||||||||||||||||  | |||||||| ||||||||||||||||| ||||| ||||||||| ||||    
T  29891241 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattgtaaaaaacatatagtttagggacgcttttgttcggttta 29891142  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| || || || || |||||| |||| |||||||||  |||| ||||||||||||||||||    
T  29891141 aaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaagcc 29891080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28636581 - 28636669
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattt 89  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  28636581 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattt 28636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 32836383 - 32836544
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| |||||||||| | ||||| || ||||| ||||||  || || |||||||| ||||||||||||| |||||||| ||| ||||||||||||| |    
T  32836383 ctaaaactgttatttctcttcgtttctgaagttgaaaataga-aggtaggactaaaactgcaaaaaacatacagtttaagaacggttttgttcgatttga 32836481  T
Q  102 aaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    || ||  | ||||||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  32836482 aagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagccaa 32836544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 35163572 - 35163733
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa--aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||| ||| |||||| || |||| |||||||| ||||||| || || |||||||| |||||||  ||||||||||||| ||||||||||||| |||||    
T  35163572 ctaaaactgtcatttctctgtgtttttggagttgaaaatagg-aggtaggactaaaactgcaaaaaaaacatatagtttagggacgattttgtttgattt 35163670  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
     ||| ||  || |||||||||||||| |||||||||||   ||||||||||||||||||||||    
T  35163671 gaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcc 35163733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 159
Target Start/End: Complemental strand, 35163295 - 35163187
Alignment:
Q  51 gactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    |||||||| |||||||||||| |||||||| ||||| ||||||||||||| ||| ||| | ||||||||| ||||| |||||||||||  ||||| ||||    
T  35163295 gactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggactaaaa 35163197  T
Q  150 gtgtaattaa 159  Q
    ||||||||||    
T  35163196 gtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 33095859 - 33095716
Alignment:
Q  17 ctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggacca 115  Q
    |||||||||| ||||| || ||||||| || || |||||||| |||||||||||| |||||||| ||||| ||||||||||||| ||| || |  |||||    
T  33095859 ctgtgcgtttttggaggtgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggtgagacca 33095761  T
Q  116 ttttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||| ||| || | ||||||  ||||||||||||| |||||||    
T  33095760 ttttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaag 33095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 33096007 - 33096159
Alignment:
Q  16 tctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggac----gattttgttcgatttaaaaaagatag 110  Q
    ||||||||||| ||||| || |||||||| | || ||||||||||||||||||||| |||||||||||||    | ||||||||||||| ||| ||| |     
T  33096007 tctgtgcgtttttggaggtgaaaataggggg-taggactaaaattgcaaaaaacatgatagtttaaggacagttggttttgttcgatttgaaagagacat 33096105  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    |||||||||| |||| |||| ||||||  | || |||||||| |||||||||||    
T  33096106 gaccattttcatgagctggtaaaaatgcgaagaacaaaagtgcaattaagccaa 33096159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 22534217 - 22534272
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  22534217 aggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagccaa 22534272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 31242878 - 31242809
Alignment:
Q  90 tgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||  |||  |||||||||||||||    
T  31242878 tgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaa 31242809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 835537 - 835394
Alignment:
Q  18 tgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccatt 117  Q
    ||||||||| ||||| || |||||||| | || |||||||  |||||||||   |||||||| ||||  ||||||||||||| ||| ||  | |||||||    
T  835537 tgtgcgtttttggaggtgaaaataggggg-taggactaaagctgcaaaaaaatgatagtttagggacagttttgttcgatttgaaagaggcaagaccatt 835439  T
Q  118 ttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| || | ||||||  ||||||||||||| |||||||||    
T  835438 ttcgtgagctgctaaaaatgtgaggaccaaaagtgcaattaagcc 835394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30250852 - 30250774
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagttta 79  Q
    ||||||| ||| |||||||||||||| || |||||||||||||||||   |||||||  |||||||||| |||||||||    
T  30250852 actaaaactgtcatttctgtgcgtttctgtagttggaaatagggagaatggactaaagctgcaaaaaacttatagttta 30250774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 30250775 - 30250722
Alignment:
Q  108 taggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 161  Q
    |||||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  30250775 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 30250722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 32836089 - 32836010
Alignment:
Q  80 aggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||||||||||||| ||| ||  |||||| |||| ||||| |||||||||||  |||| |||||||||||||||    
T  32836089 aggacggttttgttcgatttgaaagaggcaggaccgtttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 32836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 18257629 - 18257691
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaattttata 171  Q
    ||||||| |||||||||| ||||||||    |||||||||||| |||||||||||||||||||    
T  18257629 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagccaattttata 18257691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 12935318 - 12935157
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||||||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || ||||||  ||||||||  |||     
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 12935157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 835695 - 835771
Alignment:
Q  86 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||||||||| ||| ||  |||||||||||||| || || | ||||||  ||||||||||||| |||||||||    
T  835695 attttgttcgatttgaaagaggcaggaccattttcgtaagctgctaaaaatgcgaggaccaaaagtgcaattaagcc 835771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 18297662 - 18297733
Alignment:
Q  89 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    |||||| |||||||||||| | ||||| |||||||||||||| |||||   | ||| |||||||||||||||    
T  18297662 ttgttcaatttaaaaaagagatgaccaatttcgtgagttggttaaaattcgaagactaaaagtgtaattaag 18297733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 4811423 - 4811365
Alignment:
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttta 169  Q
    ||||| |||||||||| |  ||||||  | |||||||||||||||||||||||||||||    
T  4811423 gaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagccaatttta 4811365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 10900424 - 10900477
Alignment:
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaa 164  Q
    ||||| |||||||||| || ||||||   |||||||||||||||||||||||||    
T  10900424 gaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccaa 10900477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 11445371 - 11445532
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||| ||||||| | ||||| ||||   |||| || ||| |||| ||||| ||| || ||| || ||||||  ||||||||  |||     
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||  ||||||| |||||||||| || |||||    |||||||||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11445532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 28472690 - 28472637
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| ||||||||||||| |||||    |||||||||||||||||||||||    
T  28472690 aggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 28472637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 29859879 - 29859826
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| ||||||||||||| |||||    |||||||||||||||||||||||    
T  29859879 aggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 29859826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 3835188 - 3835268
Alignment:
Q  79 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| |||||||||  ||| ||| ||  |||||||||||||||||| ||||||||     |||||||||||||||||||    
T  3835188 aaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 11523834 - 11523747
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgc-aaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||| |||||||||||||||||| |||||  ||| || |||||||| ||| ||||||||| |||||||| ||||| ||||||| |||||    
T  11523834 atttttgtgcgtttatggagttgaaaata-tgaggtaggactaaaactgcaaaaaaacatgatagtttagggacggttttgtttgattt 11523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 6551 - 6391
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| ||| |||||||||||||| || ||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacgattttgttcgatttaaa 6452  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  6451 aaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagcca 6391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6776 - 6939
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatg----actaaaattgcaaaaaa-catatagtttaaggacgattttgttcg 95  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||||||| |    ||||||| ||||||||| ||| ||||||| | |||||||||||||    
T  6776 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6875  T
Q  96 atttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |  || ||||| |||||| | ||||||||||||  ||||||||||| ||||||||    
T  6876 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 6569 - 6409
Alignment:
Q  3 taaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| ||| |||||||||||||| || ||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacgattttgttcgatttaaa 6470  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  6469 aaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagcca 6409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6794 - 6957
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatg----actaaaattgcaaaaaa-catatagtttaaggacgattttgttcg 95  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||||||| |    ||||||| ||||||||| ||| ||||||| | |||||||||||||    
T  6794 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6893  T
Q  96 atttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |  || ||||| |||||| | ||||||||||||  ||||||||||| ||||||||    
T  6894 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 46655 - 46814
Alignment:
Q  4 aaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaa-aacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| |||| ||||||||| ||||||||||||||||| ||||  ||||||| | ||||| |||||||||||||| |||||||||||||||||||||    
T  46655 aaaattgtcatttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagacgattttgttcgatttaaa 46754  T
Q  103 aaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46755 atatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 46814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46428 - 46266
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  46428 actaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 46329  T
Q  100 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||| || ||| ||||||||||| ||||||||||||||  ||||||||||||| |||||||||    
T  46328 aaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaagcc 46266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 2e-26; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 205765 - 205911
Alignment:
Q  13 atttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatagg 111  Q
    |||||| ||||||| |||||||| |||||||  | || |||||||| |||||||| ||| |||||||| ||||| ||||||||||||| ||| ||  |||    
T  205765 atttctctgcgtttttggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggacggttttgttcgatttgaaagaggcagg 205862  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 160  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  205863 accattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 210793 - 210883
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    |||||||| ||||| ||||||||||||| ||| ||  |||||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 210883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 205027 - 204931
Alignment:
Q  64 aaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |||||||| |||| |||||||| ||||| ||| ||  ||||||||  ||||||| ||||||||||   ||||||||||||||||||||    
T  205027 aaaaacatgatagtttagggacaattttgtttgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 205457 - 205361
Alignment:
Q  64 aaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |||||||| |||| | |||||||||||| ||| ||  ||||||||  ||||||| ||||||||||   |||| |||||||||||||||    
T  205457 aaaaacatgatagtttagggacaaatttgttcgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggatcaaaagtgtaattaa 205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 78478 - 78395
Alignment:
Q  1 actaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacatatagtttaaggac 84  Q
    ||||||||||| |||||| ||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||    
T  78478 actaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgcaaaaaacatatagtttagggac 78395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 159282 - 159427
Alignment:
Q  17 ctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggacca 115  Q
    |||||||||| ||||| || |||||||| | ||||||||||| ||||||||| || |||||||| | ||||||||||||||||| ||| ||| | |||||    
T  159282 ctgtgcgtttttggaggtgaaaataggggg-tatgactaaaactgcaaaaaatatgatagtttatgaacgattttgttcgatttgaaagagacatgacca 159380  T
Q  116 ttttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||||||  ||| ||||||| ||||  ||| ||| |||||||||    
T  159381 ttttcgtgagccggtaaaaatggaaggattaaatgtgcaattaagcc 159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 15272 - 15113
Alignment:
Q  2 ctaaaattgttatttctgtgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||| || ||| |||| ||| |||||||| |||||||| ||  | |||||||||||||     
T  15272 ctaaaattgttatttctgtgcgtttatgaagttgaaaata-ggaggtaagacaaaaactgc-aaaaacatgatagtttagggttgtttttgttcgatttg 15175  T
Q  101 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||| ||  || | |||||||| ||| |||||||||||  | |||||||||| ||||||||||    
T  15174 aaagaggcagaatcattttcgcgagctggtcaaaatgcgatgaccaaaagtataattaagcc 15113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 15503 - 15645
Alignment:
Q  20 tgcgtttatggagttggaaatagggagatatgactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagataggaccattt 118  Q
    ||||||| |||||||| ||||||| || ||||||||||| | |||||| ||| |||||||| ||||  ||||||||||||| ||| ||  ||||||||||    
T  15503 tgcgtttctggagttgaaaatagg-aggtatgactaaaactacaaaaa-catgatagtttagggacagttttgttcgatttgaaagagtcaggaccattt 15600  T
Q  119 tcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 163  Q
    ||||||| || ||||||||  || ||||||| | |||||||||||    
T  15601 tcgtgagctgatcaaaatgcgagaaccaaaaatctaattaagcca 15645  T

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Target: scaffold1432 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 504 - 611
Alignment:
Q  55 aaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgta 154  Q
    |||| ||||||||||||||||||||  |||  ||||||||||||| ||| ||  | ||||||||||||||| | |||||||||  |||| ||||||||||    
T  504 aaaactgcaaaaaacatatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgta 603  T
Q  155 attaagcc 162  Q
    ||||||||    
T  604 attaagcc 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 1720 - 1667
Alignment:
Q  109 aggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 162  Q
    ||||||| |||||||||| || |||||  | |||||||||||||||||||||||    
T  1720 aggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcc 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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