View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_high_55 (Length: 301)
Name: NF1274_high_55
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 30 - 289
Target Start/End: Complemental strand, 24717670 - 24717411
Alignment:
| Q |
30 |
cctttaaacaagcttatgagtttccttggagtttaaacaatcgttgagacaaatatttaaagatagtgaaagacatcatttgttgttgttctcacattct |
129 |
Q |
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| T |
24717670 |
cctttaaacaagcttatgagtttccttggagtttaaacaatcgttgagacaaatatttaaagatagtgaaagacatcatttgttgttgttctcacattct |
24717571 |
T |
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| Q |
130 |
aagagaaaataatgcactagcaaactctttgaccaaaaatggtcatggtctacctcaattttactcctaatggtgggagtaaaatcttttatataagttt |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24717570 |
aagagaaaataatgcactagcaaactctttgaccaaaaatggtcatggtctgcctcaattttactcctaatggtgggagtaaaatcttttatataagttt |
24717471 |
T |
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| Q |
230 |
tgtcctataaaatttacacatattttgcttttagttttcgtaccaacccaaaaacatatt |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24717470 |
tgtcctataaaatttacacatattttgcttttagttttcgtaccaacccaaaaacatatt |
24717411 |
T |
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