View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_high_57 (Length: 295)
Name: NF1274_high_57
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_high_57 |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 27171583 - 27171383
Alignment:
| Q |
29 |
tcgaataatataacaaacaaaactctagagtaatttgcaacttaaaataaaagtaaacaagttgttaaaaaccataactaactatctaaggtt-gtatat |
127 |
Q |
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| T |
27171583 |
tcgaacaacataacaaacaaaactctagagtaatttgcgacttaaaataaaagtaaacaagttcttaaaaaccataactaactatctaaggtttgtatat |
27171484 |
T |
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| Q |
128 |
tacaaaccagtaactataaccctagaactctccaccgccacaacctccaccatgatgacttccatcatctccagatttaaagacttgcgcatcatcattc |
227 |
Q |
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| T |
27171483 |
tacaaaccagtaactataatcctaagactctccacttccacaacctccaccatgatgacttccaccatctctagctttaaagacttgcgcatcatcattc |
27171384 |
T |
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| Q |
228 |
t |
228 |
Q |
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| T |
27171383 |
t |
27171383 |
T |
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