View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1274_high_59 (Length: 289)

Name: NF1274_high_59
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1274_high_59
NF1274_high_59
[»] chr7 (40 HSPs)
chr7 (1-261)||(1350215-1350477)
chr7 (1-261)||(1373513-1373770)
chr7 (1-111)||(1358162-1358280)
chr7 (210-261)||(1384080-1384131)
chr7 (210-261)||(1390185-1390236)
chr7 (210-261)||(1358332-1358383)
chr7 (216-261)||(1394437-1394482)
chr7 (56-165)||(27378856-27378965)
chr7 (56-128)||(17989051-17989123)
chr7 (56-122)||(36370645-36370711)
chr7 (22-123)||(44151476-44151575)
chr7 (56-128)||(12110330-12110402)
chr7 (56-128)||(30456478-30456550)
chr7 (70-116)||(1413120-1413166)
chr7 (56-167)||(47941250-47941365)
chr7 (74-123)||(5369737-5369786)
chr7 (62-166)||(44917570-44917675)
chr7 (56-105)||(46104595-46104644)
chr7 (56-128)||(7623108-7623180)
chr7 (63-111)||(25296971-25297019)
chr7 (62-122)||(28340878-28340938)
chr7 (56-128)||(29363488-29363560)
chr7 (56-128)||(31338478-31338550)
chr7 (56-128)||(38010684-38010756)
chr7 (56-128)||(40689014-40689086)
chr7 (64-128)||(44910574-44910638)
chr7 (56-111)||(4966143-4966198)
chr7 (56-123)||(10190770-10190837)
chr7 (81-151)||(47004033-47004104)
chr7 (62-167)||(3610774-3610880)
chr7 (81-123)||(9527143-9527185)
chr7 (62-128)||(23918927-23918993)
chr7 (56-130)||(47177604-47177678)
chr7 (62-123)||(3559010-3559071)
chr7 (56-97)||(12792591-12792632)
chr7 (61-122)||(39169449-39169509)
chr7 (134-167)||(47559715-47559748)
chr7 (104-167)||(7244632-7244696)
chr7 (59-111)||(18350738-18350790)
chr7 (62-160)||(36484069-36484169)
[»] chr5 (37 HSPs)
chr5 (23-165)||(17258880-17259021)
chr5 (23-111)||(32408589-32408675)
chr5 (59-111)||(2569726-2569778)
chr5 (64-128)||(14295476-14295540)
chr5 (81-167)||(32059642-32059728)
chr5 (69-161)||(26209454-26209546)
chr5 (56-111)||(13604877-13604932)
chr5 (56-167)||(33234292-33234403)
chr5 (61-128)||(38047888-38047955)
chr5 (56-98)||(3237093-3237135)
chr5 (81-166)||(10907310-10907396)
chr5 (58-123)||(18543226-18543292)
chr5 (14-111)||(41957439-41957534)
chr5 (81-165)||(18857453-18857538)
chr5 (23-111)||(21768194-21768280)
chr5 (56-128)||(9202776-9202848)
chr5 (15-122)||(10272420-10272525)
chr5 (91-123)||(13193774-13193806)
chr5 (63-111)||(16945018-16945066)
chr5 (55-99)||(29201532-29201576)
chr5 (12-107)||(32172644-32172737)
chr5 (61-128)||(12975317-12975384)
chr5 (56-103)||(30217077-30217124)
chr5 (93-167)||(35135727-35135802)
chr5 (61-123)||(8985636-8985698)
chr5 (23-128)||(28586763-28586866)
chr5 (56-110)||(29054896-29054950)
chr5 (56-98)||(32197720-32197762)
chr5 (23-92)||(36639528-36639595)
chr5 (73-110)||(18286779-18286816)
chr5 (70-111)||(36181219-36181260)
chr5 (57-98)||(41929729-41929770)
chr5 (56-112)||(2568644-2568700)
chr5 (56-128)||(3970708-3970780)
chr5 (56-128)||(12425541-12425613)
chr5 (64-128)||(36539716-36539780)
chr5 (56-128)||(41016149-41016221)
[»] chr3 (39 HSPs)
chr3 (12-152)||(24887270-24887408)
chr3 (56-166)||(36101499-36101610)
chr3 (24-117)||(20502066-20502157)
chr3 (23-167)||(27290898-27291039)
chr3 (56-128)||(25453887-25453959)
chr3 (23-111)||(33405163-33405250)
chr3 (15-152)||(3044248-3044384)
chr3 (56-167)||(24158531-24158642)
chr3 (86-165)||(20192664-20192744)
chr3 (16-111)||(52618990-52619083)
chr3 (56-166)||(36139809-36139920)
chr3 (62-167)||(27792802-27792908)
chr3 (61-128)||(33965522-33965591)
chr3 (83-128)||(2201098-2201143)
chr3 (63-111)||(20874339-20874387)
chr3 (56-167)||(22232756-22232868)
chr3 (62-122)||(43875624-43875684)
chr3 (63-111)||(47904098-47904146)
chr3 (12-106)||(43115048-43115140)
chr3 (14-111)||(1217788-1217883)
chr3 (81-166)||(33674710-33674792)
chr3 (74-128)||(38462251-38462305)
chr3 (12-164)||(54775061-54775211)
chr3 (80-164)||(1395604-1395689)
chr3 (75-128)||(19679375-19679428)
chr3 (56-105)||(22203423-22203472)
chr3 (56-117)||(22343589-22343650)
chr3 (63-128)||(28306128-28306193)
chr3 (56-128)||(1816553-1816625)
chr3 (56-96)||(2071058-2071098)
chr3 (56-128)||(2197806-2197878)
chr3 (75-123)||(19679807-19679855)
chr3 (56-128)||(21367637-21367709)
chr3 (72-120)||(21872315-21872363)
chr3 (56-128)||(23315596-23315668)
chr3 (56-128)||(24785175-24785247)
chr3 (56-128)||(32064410-32064481)
chr3 (73-129)||(42753575-42753631)
chr3 (55-111)||(52440689-52440745)
[»] chr1 (52 HSPs)
chr1 (12-123)||(6231802-6231912)
chr1 (59-166)||(33527178-33527286)
chr1 (63-167)||(17269180-17269285)
chr1 (56-128)||(7218102-7218174)
chr1 (56-152)||(44422646-44422741)
chr1 (65-158)||(48830113-48830207)
chr1 (56-121)||(4078177-4078242)
chr1 (67-128)||(37272625-37272686)
chr1 (56-167)||(10854663-10854775)
chr1 (12-48)||(43771885-43771921)
chr1 (22-128)||(30257653-30257757)
chr1 (64-119)||(47960660-47960715)
chr1 (10-119)||(4622072-4622179)
chr1 (57-111)||(25005826-25005880)
chr1 (23-128)||(27887115-27887218)
chr1 (10-147)||(29723440-29723575)
chr1 (67-120)||(4363671-4363724)
chr1 (56-105)||(4700094-4700143)
chr1 (56-105)||(7137026-7137075)
chr1 (56-105)||(7472304-7472353)
chr1 (56-152)||(10199436-10199533)
chr1 (56-105)||(34290229-34290278)
chr1 (76-128)||(10581125-10581177)
chr1 (12-111)||(11695848-11695945)
chr1 (15-164)||(30259475-30259624)
chr1 (56-128)||(34179900-34179972)
chr1 (81-152)||(49517015-49517087)
chr1 (13-111)||(4549217-4549313)
chr1 (57-167)||(7273968-7274079)
chr1 (56-123)||(24913438-24913505)
chr1 (16-110)||(31517730-31517822)
chr1 (56-111)||(35017563-35017618)
chr1 (56-118)||(3924604-3924666)
chr1 (81-123)||(15361688-15361730)
chr1 (62-128)||(25006068-25006134)
chr1 (62-123)||(4549576-4549637)
chr1 (23-123)||(6292468-6292566)
chr1 (56-121)||(16322826-16322891)
chr1 (56-109)||(25479570-25479623)
chr1 (83-151)||(29007771-29007840)
chr1 (55-128)||(44032026-44032099)
chr1 (55-167)||(4019620-4019731)
chr1 (56-108)||(5592713-5592765)
chr1 (63-123)||(6074449-6074509)
chr1 (75-123)||(8130411-8130459)
chr1 (72-128)||(9656620-9656676)
chr1 (93-164)||(15360827-15360899)
chr1 (17-128)||(36151496-36151605)
chr1 (134-166)||(37818395-37818427)
chr1 (56-108)||(39347995-39348047)
chr1 (56-96)||(43332486-43332526)
chr1 (56-167)||(52286608-52286720)
[»] scaffold0024 (1 HSPs)
scaffold0024 (75-165)||(27508-27599)
[»] chr6 (34 HSPs)
chr6 (56-166)||(4006645-4006756)
chr6 (16-122)||(3528779-3528883)
chr6 (13-111)||(4246397-4246493)
chr6 (62-128)||(2117373-2117439)
chr6 (56-128)||(1497951-1498023)
chr6 (56-128)||(31671102-31671174)
chr6 (12-122)||(10616527-10616635)
chr6 (56-107)||(33911310-33911361)
chr6 (55-89)||(29837111-29837145)
chr6 (216-261)||(7009741-7009786)
chr6 (10-128)||(281832-281948)
chr6 (56-111)||(1275136-1275191)
chr6 (81-128)||(2027459-2027506)
chr6 (65-128)||(3155146-3155209)
chr6 (56-123)||(13907822-13907889)
chr6 (56-123)||(18264304-18264371)
chr6 (12-164)||(5328907-5329057)
chr6 (62-108)||(7149507-7149553)
chr6 (69-111)||(10860958-10861000)
chr6 (23-128)||(27894017-27894119)
chr6 (16-128)||(725645-725755)
chr6 (57-126)||(2167989-2168058)
chr6 (57-126)||(2179622-2179691)
chr6 (56-105)||(2735062-2735111)
chr6 (82-123)||(5550107-5550148)
chr6 (62-111)||(24838777-24838826)
chr6 (81-161)||(29274282-29274363)
chr6 (56-117)||(31324437-31324498)
chr6 (56-156)||(33887771-33887872)
chr6 (61-105)||(1401102-1401146)
chr6 (56-167)||(8420225-8420337)
chr6 (56-128)||(10400239-10400311)
chr6 (59-107)||(13907409-13907457)
chr6 (56-128)||(33787773-33787845)
[»] chr2 (51 HSPs)
chr2 (61-167)||(28803539-28803646)
chr2 (23-128)||(33256710-33256813)
chr2 (61-166)||(10143103-10143209)
chr2 (14-123)||(43141846-43141953)
chr2 (56-167)||(3235412-3235522)
chr2 (72-167)||(17952745-17952841)
chr2 (12-123)||(43205284-43205393)
chr2 (56-111)||(9395117-9395172)
chr2 (56-111)||(15377752-15377807)
chr2 (56-111)||(39983329-39983384)
chr2 (56-166)||(41817099-41817210)
chr2 (17-152)||(1939323-1939457)
chr2 (56-98)||(4026817-4026859)
chr2 (56-122)||(13736321-13736387)
chr2 (56-98)||(44644278-44644320)
chr2 (62-119)||(6561340-6561397)
chr2 (16-167)||(9478229-9478379)
chr2 (56-101)||(10884549-10884594)
chr2 (62-111)||(15780064-15780113)
chr2 (56-144)||(36415701-36415790)
chr2 (81-160)||(39621890-39621968)
chr2 (84-167)||(11344340-11344424)
chr2 (60-167)||(13630313-13630421)
chr2 (70-122)||(13866865-13866917)
chr2 (56-128)||(22681213-22681285)
chr2 (12-122)||(1742018-1742126)
chr2 (81-128)||(3102663-3102710)
chr2 (56-123)||(16353837-16353903)
chr2 (56-111)||(18066115-18066170)
chr2 (56-111)||(18179268-18179323)
chr2 (68-111)||(25800816-25800859)
chr2 (18-128)||(33942120-33942228)
chr2 (56-123)||(35486391-35486458)
chr2 (56-111)||(43985031-43985086)
chr2 (56-98)||(3049974-3050016)
chr2 (58-128)||(5043590-5043660)
chr2 (56-122)||(25790102-25790168)
chr2 (75-128)||(11513868-11513921)
chr2 (56-105)||(42419990-42420039)
chr2 (61-122)||(42817409-42817470)
chr2 (56-128)||(8017404-8017476)
chr2 (56-128)||(9556209-9556281)
chr2 (12-48)||(11344756-11344792)
chr2 (56-128)||(13869123-13869195)
chr2 (56-124)||(26626847-26626915)
chr2 (56-116)||(30552672-30552732)
chr2 (63-166)||(34054936-34055040)
chr2 (56-128)||(35485887-35485959)
chr2 (56-128)||(36863653-36863725)
chr2 (66-122)||(37276722-37276778)
chr2 (60-128)||(37292379-37292447)
[»] chr4 (34 HSPs)
chr4 (56-123)||(21157743-21157810)
chr4 (23-164)||(23819023-23819162)
chr4 (56-152)||(49219084-49219181)
chr4 (16-162)||(2996508-2996653)
chr4 (55-167)||(44319880-44319992)
chr4 (81-119)||(17883546-17883584)
chr4 (56-98)||(47800623-47800665)
chr4 (56-98)||(56480348-56480390)
chr4 (62-158)||(35958594-35958691)
chr4 (55-99)||(12650311-12650355)
chr4 (24-167)||(30207569-30207710)
chr4 (56-116)||(36722697-36722757)
chr4 (56-99)||(1706621-1706664)
chr4 (82-117)||(10365753-10365788)
chr4 (56-111)||(29778782-29778837)
chr4 (58-105)||(35507355-35507402)
chr4 (58-105)||(35507487-35507534)
chr4 (56-119)||(53315305-53315368)
chr4 (61-128)||(54325070-54325137)
chr4 (56-122)||(7694038-7694104)
chr4 (56-106)||(25309233-25309283)
chr4 (85-166)||(42321936-42322018)
chr4 (61-119)||(42866047-42866105)
chr4 (35-95)||(3155606-3155664)
chr4 (62-167)||(3891507-3891611)
chr4 (134-167)||(4663803-4663836)
chr4 (12-128)||(24929463-24929577)
chr4 (56-89)||(40008546-40008579)
chr4 (81-122)||(41097296-41097337)
chr4 (56-104)||(1137706-1137754)
chr4 (64-128)||(3175921-3175985)
chr4 (23-98)||(11264301-11264374)
chr4 (56-128)||(16200009-16200081)
chr4 (56-92)||(21043263-21043299)
[»] chr8 (39 HSPs)
chr8 (62-152)||(6509337-6509426)
chr8 (56-123)||(10075579-10075646)
chr8 (56-123)||(39389204-39389271)
chr8 (61-166)||(4763849-4763955)
chr8 (72-122)||(30013194-30013244)
chr8 (56-166)||(34522082-34522195)
chr8 (12-164)||(41620277-41620428)
chr8 (23-123)||(11795067-11795165)
chr8 (56-128)||(1470884-1470956)
chr8 (23-122)||(12361168-12361265)
chr8 (57-97)||(25097387-25097427)
chr8 (56-128)||(29973051-29973123)
chr8 (56-128)||(42215334-42215406)
chr8 (15-123)||(43704365-43704473)
chr8 (56-111)||(5227522-5227577)
chr8 (56-123)||(9836882-9836949)
chr8 (56-99)||(27028830-27028873)
chr8 (56-123)||(31862468-31862535)
chr8 (12-102)||(31875581-31875669)
chr8 (70-105)||(38537584-38537619)
chr8 (56-111)||(41309772-41309827)
chr8 (56-165)||(4558730-4558840)
chr8 (76-122)||(28769387-28769433)
chr8 (12-109)||(39551195-39551290)
chr8 (63-117)||(42764248-42764302)
chr8 (56-121)||(1433525-1433590)
chr8 (63-167)||(4390143-4390248)
chr8 (56-109)||(9562291-9562344)
chr8 (16-128)||(11183515-11183625)
chr8 (58-99)||(40014919-40014960)
chr8 (134-167)||(42476035-42476068)
chr8 (56-88)||(1470029-1470061)
chr8 (56-128)||(8062494-8062566)
chr8 (56-128)||(10383855-10383927)
chr8 (75-167)||(26717187-26717278)
chr8 (81-152)||(26820144-26820216)
chr8 (66-110)||(30043784-30043828)
chr8 (70-122)||(32143087-32143139)
chr8 (56-128)||(33209248-33209320)
[»] scaffold0352 (1 HSPs)
scaffold0352 (56-107)||(12060-12111)
[»] scaffold0091 (1 HSPs)
scaffold0091 (56-111)||(6939-6994)
[»] scaffold0020 (1 HSPs)
scaffold0020 (10-108)||(159957-160053)
[»] scaffold0092 (1 HSPs)
scaffold0092 (53-99)||(40230-40276)
[»] scaffold0254 (1 HSPs)
scaffold0254 (57-126)||(2641-2710)
[»] scaffold0110 (1 HSPs)
scaffold0110 (76-128)||(4271-4323)


Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1350215 - 1350477
Alignment:
Q  1 ttattagcataatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttataga 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1350215 ttattagcataatggaaacaatttatgacatgcccgtaaactgttttcttcttatattttcataagctcttcaggatagtttatgaaaacagcttataga 1350314  T
Q  101 ttatatgaaaaaagtttgactttcttttgtcaa-tgttatagaaataacttattcataagcacttatagatttgttggcaaaagtacacaagtttgttga 199  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1350315 ttatgtgaaaaaagtttgactttcttttgtcaattgttatagaaataacttattcataagcacttatagatttgttggcaaaagtacacaagtttgttga 1350414  T
Q  200 ccc-nnnnnnncaattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1350415 cccttttttttcaattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 1350477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1373513 - 1373770
Alignment:
Q  1 ttattagcataatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttataga 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||| |||||||    
T  1373513 ttattagcataatcgaaacaatttatgacatgtccgtaaactgttttcatcttatattttcataagcccttcaagatagtttatgaaaacaggttataga 1373612  T
Q  101 ttatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcacttatagatttgttggcaaaagtacacaagtttgttga 199  Q
     ||||||||||||||||||||||  ||| ||   ||| ||| ||||||||| | |||    | ||| ||||| ||||  ||| | ||||||||||||| |    
T  1373613 ctatatgaaaaaagtttgactttaatttatcttttgtcataaaaataacttttacat----atttagagattcgttgaaaaatgcacacaagtttgttaa 1373708  T
Q  200 cccnnnnnnncaattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    ||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1373709 ccattttgtgcaattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 1373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1358162 - 1358280
Alignment:
Q  1 ttattagcataatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttc--------aggatagtttatgaaaacag 92  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||        ||||||||||||||||||||    
T  1358162 ttattagcataatggaaacaatttatgacatgtctgtaaactgttttcatcttatattttcataagctcttcaggatagtaggatagtttatgaaaacag 1358261  T
Q  93 cttatagattatatgaaaa 111  Q
    |||||||||||||||||||    
T  1358262 cttatagattatatgaaaa 1358280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 1384080 - 1384131
Alignment:
Q  210 caattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1384080 caattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 1384131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 1390185 - 1390236
Alignment:
Q  210 caattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390185 caattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 1390236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 1358332 - 1358383
Alignment:
Q  210 caattttaggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1358332 caattttaggtgtggcctcctattggcaagaagaagtttgagacactttcat 1358383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 1394437 - 1394482
Alignment:
Q  216 taggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1394437 taggtgtggcctcctattggcaagaagaagtttgagactctttcat 1394482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 27378856 - 27378965
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattca 155  Q
    ||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| ||||  ||||| ||||     ||| ||||||||| ||||| ||    
T  27378856 attttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaacagttctactttattttacttttgtaatagaaatagcttataca 27378955  T
Q  156 taagcactta 165  Q
    ||||||||||    
T  27378956 taagcactta 27378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 17989051 - 17989123
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||||||||| || |||||||||||  |||||| ||||||||||| ||||||||||| ||||    
T  17989051 attttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttatttt 17989123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 36370711 - 36370645
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||| |||| |||||| ||||| ||||    
T  36370711 atttccataagctcttcaggatagtttatggaaacaacttatagcttatgtgaaaacagtttaactt 36370645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 44151476 - 44151575
Alignment:
Q  22 tttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgact 121  Q
    |||||||||||||| |||  |||||||  ||||  ||| |||||||| |||| ||||||||||||||||| ||||||| ||||||| ||| ||||| |||    
T  44151476 tttatgacatgtccataagatgttttcagctta--tttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttact 44151573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 12110402 - 12110330
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| |||||  |||| | ||||||||| ||||    
T  12110402 attttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttatttt 12110330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 30456478 - 30456550
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||| || ||||||||||||||||  ||||||  ||||||||||| | ||||||||| ||||    
T  30456478 attttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttatttt 30456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 1413120 - 1413166
Alignment:
Q  70 ttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtt 116  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  1413120 ttcaagatagtttattgaaacagcttatagattatatgaaaaaagtt 1413166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 47941365 - 47941250
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc----aatgttatagaaataactta 151  Q
    |||||||||| |||| | |||||| |||||||||||| ||||||||||||  |||| | |||||| || |||||||      ||||||||||||| ||||    
T  47941365 attttcataaactctccgggatagcttatgaaaacagtttatagattatactaaaataatttgaccttattttgtcttgttgtgttatagaaatagctta 47941266  T
Q  152 ttcataagcacttata 167  Q
    ||| ||||| ||||||    
T  47941265 ttcttaagcgcttata 47941250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 5369737 - 5369786
Alignment:
Q  74 ggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||| |||||||||||||||||||  |||||||||| |||||||||||    
T  5369737 ggatagcttatgaaaacagcttatagcatatatgaaaacagtttgacttt 5369786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 44917570 - 44917675
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt-cttttgtcaatgttatagaaataacttattcataagc 160  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||  |||| ||||||||||| ||||   |  ||||||||||| |||||||| ||||||    
T  44917570 ataatctctttaggatggtttatggaaacaacttatagattatacaaaaacagtttgactttgctttatcctgtgttatagaaacaacttatttataagc 44917669  T
Q  161 acttat 166  Q
     |||||    
T  44917670 gcttat 44917675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 46104595 - 46104644
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||| |||||    
T  46104595 attttcataagctcttcagcatagcttatgaaaacaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 7623180 - 7623108
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| ||| ||||||| ||||||||||||||| |||||| || |||||| |||| |||| |||||| ||||    
T  7623180 attttcgtaaactcttcaagatagtttatgaaaatagcttacagcttatataaaaagagttggactttatttt 7623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 25297019 - 25296971
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||| || | ||||||||||||||||||||||| |||||||||||    
T  25297019 taagctctacatggtagtttatgaaaacagcttatagtttatatgaaaa 25296971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 28340878 - 28340938
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||||  ||||||| ||||||||||||||||||| |||||||| || | ||||||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatatgacaacaatttgactt 28340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 29363560 - 29363488
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||||||||| |||||||  |||||| |||||||||||  | ||||||||| ||||||||||| ||||    
T  29363560 atttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttatttt 29363488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 31338550 - 31338478
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||   ||||||||||||| ||||| ||||||  |||||| |||| ||||||||||| ||||    
T  31338550 attttcataagctccataggatagtttatggaaacaacttataacttatataaaaacagtttgactttatttt 31338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 38010756 - 38010684
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||||| |||  ||||||| ||||||||||||||||||| ||||||||||| | |||| |||| ||||    
T  38010756 atttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttt 38010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 40689014 - 40689086
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| | | |||||||| ||||||| ||||||||||| ||||||||||| | ||| ||||| ||||    
T  40689014 attttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttatttt 40689086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 44910638 - 44910574
Alignment:
Q  64 aagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||| || ||||||||||||||||| ||| ||| || | |||||||||||||||||| ||||    
T  44910638 aagctctccatgatagtttatgaaaacaacttttagcttgtgtgaaaaaagtttgactttatttt 44910574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 4966198 - 4966143
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||| ||||||||||||||||| | ||||||||||||||||||  | |||||||||    
T  4966198 atttccataagctcttcaggatggcttatgaaaacagcttatacctaatatgaaaa 4966143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 10190837 - 10190770
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||| |||||||| || || ||||||||||||||||  ||| || ||||||||||| |||||||||||    
T  10190837 atttccataagcttttaagaatagtttatgaaaacaatttacagtttatatgaaaacagtttgacttt 10190770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 47004104 - 47004033
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataactta 151  Q
    ||||||||||||||||||| | |||| |||| ||||||||||| |||| || | ||||||||||||| ||||    
T  47004104 ttatgaaaacagcttatagttcatataaaaatagtttgactttattttatctattgttatagaaatagctta 47004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 3610774 - 3610880
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagc 160  Q
    |||||||||  ||||||||||| ||||||| ||||||| |||||  |||| |||||| |||  |||| ||   |||| |||||||| ||||| |||||||    
T  3610774 ataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagc 3610873  T
Q  161 acttata 167  Q
    |||||||    
T  3610874 acttata 3610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 9527143 - 9527185
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||    
T  9527143 ttatgaaaacaacttatagtttatatgaaaacagtttgacttt 9527185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 23918993 - 23918927
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| |||||| |||||||||||  |||| |||||| ||||||||||| | ||||||||| ||||    
T  23918993 ataagcccttcagaatagtttatgattacagattatagcttatatgaaaacaatttgactttatttt 23918927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 47177678 - 47177604
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgt 130  Q
    ||||||||||  ||| || ||||| || |||||||||||||||| ||||||||||| | ||| ||||| ||||||    
T  47177678 attttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaactttgttttgt 47177604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 3559071 - 3559010
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||| | || ||||||| |||||||| |||||||||||||||| ||| ||| |||||||    
T  3559071 ataagctatacaagatagttaatgaaaacggcttatagattatatgtaaacagtctgacttt 3559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 12792591 - 12792632
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttat 97  Q
    |||||||||||||||||| ||||| ||||||||| |||||||    
T  12792591 attttcataagctcttcaagatagcttatgaaaatagcttat 12792632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 39169449 - 39169509
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||  |||| ||| ||||||    
T  39169449 cataagctct-caggatagcttatgaaaacagtttatagattatacaaaaacagtctgactt 39169509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 47559715 - 47559748
Alignment:
Q  134 tgttatagaaataacttattcataagcacttata 167  Q
    |||| |||||||||||||||||||||||||||||    
T  47559715 tgttgtagaaataacttattcataagcacttata 47559748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 7244696 - 7244632
Alignment:
Q  104 tatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattcataagcacttata 167  Q
    |||||||| |||||||||||||||| ||  | | |||||||||| ||||| ||||||||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttata 7244632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 18350738 - 18350790
Alignment:
Q  59 ttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||| || ||||| ||||||||||||||||||  ||||| |||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatacgaaaa 18350790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 36484069 - 36484169
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagt-ttgactttcttttgtcaa-tgttatagaaataacttattcataag 159  Q
    |||||||||||||||||  || |||||||| |||||||||| || |||||||   |||||||| |||| ||   ||||||||||| | ||||||||||||    
T  36484069 ataagctcttcaggataacttgtgaaaacaacttatagattctacgaaaaaaaaattgactttattttttcgtgtgttatagaaagagcttattcataag 36484168  T
Q  160 c 160  Q
    |    
T  36484169 c 36484169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 17258880 - 17259021
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||| | ||| ||||||||  ||||  ||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||    
T  17258880 ttatgacatgttcataagctgttttcagctta--ttttcataagctcttcaggatagtttatgaaaacagcttattgattgtacgaaaatagtttgactt 17258977  T
Q  123 tcttttgtc-aatgttatagaaataacttattcataagcactta 165  Q
    | |||||||   |||||| |||||  ||||||||||||||||||    
T  17258978 tattttgtcgcgtgttatggaaatggcttattcataagcactta 17259021  T

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Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 32408589 - 32408675
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||  || ||||| ||||  ||| ||||||||||||||||||| ||||||||| || |||||| |||||||||||    
T  32408589 ttatgacatgtccgtaagttggtttctgctta--tttccataagctcttcaggatagcttatgaaaatagtttatagcttatatgaaaa 32408675  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 2569726 - 2569778
Alignment:
Q  59 ttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||| || | |||||||||||||||||||||||||||||||||||||    
T  2569726 ttcataagctttttatgatagtttatgaaaacagcttatagattatatgaaaa 2569778  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 14295540 - 14295476
Alignment:
Q  64 aagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||| |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||| ||||    
T  14295540 aagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttatttt 14295476  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 32059642 - 32059728
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattcataagcacttata 167  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||| ||   |||| | ||| | ||||| ||||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttagttacaaaaacagcttatacataagcacttata 32059728  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 26209454 - 26209546
Alignment:
Q  69 cttcaggatagtttatgaaaacagcttatagattata-tgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattcataagca 161  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||||| | || |||||| |||| ||  ||||||||||||||||||| ||||||||    
T  26209454 cttcatgatagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatc-ttgttatagaaataacttatacataagca 26209546  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 13604877 - 13604932
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||| ||||  |||||||||||||||| || |||||||||||    
T  13604877 attttcataagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaa 13604932  T

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Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 33234403 - 33234292
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattca 155  Q
    |||| |||||||||||||| |||  ||| ||||| ||||||||| |||||| |||| ||||||||||  |||| |   |||  |||||||||||||| ||    
T  33234403 atttacataagctcttcagcataacttacgaaaatagcttatagcttatataaaaacagtttgacttcattttatatttgtcgtagaaataacttataca 33234304  T
Q  156 taagcacttata 167  Q
     |||||||||||    
T  33234303 caagcacttata 33234292  T

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Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 38047888 - 38047955
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||| |||||||| ||||||||||||| |||||  |||||||||| | ||||||||| ||||    
T  38047888 cataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttatttt 38047955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 3237135 - 3237093
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  3237135 attttcataagctctttaggatagcttatgaaaacagcttata 3237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 10907396 - 10907310
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattcataagcacttat 166  Q
    |||| |||||||||||||||||||||||||  ||||||| ||| ||||  || | | |||||||||||||||| ||||| |||||||    
T  10907396 ttataaaaacagcttatagattatatgaaagtagtttgattttattttaccattagctatagaaataacttatacataaacacttat 10907310  T

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Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 18543226 - 18543292
Alignment:
Q  58 tttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa-aagtttgacttt 123  Q
    ||||||||||||| |||||||| ||||||||||| ||||||  |||||| |||| ||||||||||||    
T  18543226 tttcataagctctccaggatagcttatgaaaacaacttatatcttatataaaaacaagtttgacttt 18543292  T

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Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 41957439 - 41957534
Alignment:
Q  14 ggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||  ||||||||||||| |||  ||||||| |||||  |||||||||| |||  ||||||| ||||||||||||||||||  ||| |||||||    
T  41957439 ggaaacagcttatgacatgtccataagttgttttcatctta--ttttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaa 41957534  T

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Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 18857453 - 18857538
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcactta 165  Q
    |||||||||||||||||||||||||  |||| | ||||||||| |||| ||   |||||| |||||| ||||||||||| ||||||    
T  18857453 ttatgaaaacagcttatagattatagaaaaacaatttgactttattttatcgtgtgttattgaaatagcttattcataaacactta 18857538  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 21768194 - 21768280
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||||| ||  ||||||||  ||||  ||||| ||||||||||| ||||  |||||||||||||||| || |||||||||||    
T  21768194 ttatgacatgtccatacgctgttttcaactta--ttttcgtaagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaa 21768280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 9202776 - 9202848
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| |||||| ||||  ||||||||||||||||| | ||||||||||| | ||| ||||| ||||    
T  9202776 attttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttatttt 9202848  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 10272420 - 10272525
Alignment:
Q  15 gaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaag 114  Q
    ||||||| |||||||||||| ||||  |||||||  ||||  ||||||||| |||| || ||| | ||||||||||| ||||||| ||||| ||||| |     
T  10272420 gaaacaacttatgacatgtctgtaagttgttttcagctta--ttttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaa 10272517  T
Q  115 tttgactt 122  Q
    ||||||||    
T  10272518 tttgactt 10272525  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 123
Target Start/End: Complemental strand, 13193806 - 13193774
Alignment:
Q  91 agcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||||||||||||||||||||||||||||||    
T  13193806 agcttatagattatatgaaaaaagtttgacttt 13193774  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 16945018 - 16945066
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||    
T  16945018 taagctcttcaggatagttaatgaaaatagcttatagcttctatgaaaa 16945066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 29201576 - 29201532
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaacagcttatag 99  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||    
T  29201576 aatttccataagctctccaggataggttatgaaaacagcttatag 29201532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 32172737 - 32172644
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatg 107  Q
    |||||||||| ||||||||||||| ||| |  |||||  ||||  ||| ||| || |||||| ||||| ||||||||||||||||||| |||||||    
T  32172737 atggaaacaacttatgacatgtccataagccattttcagctta--tttccattagttcttcatgatagcttatgaaaacagcttatagcttatatg 32172644  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 12975384 - 12975317
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||| || ||||| ||||||| ||||||||||| ||||||||||| | ||||| ||| ||||    
T  12975384 cataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttatttt 12975317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 30217124 - 30217077
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagatta 103  Q
    |||| |||||||||| |||||||| |||||||| ||||||||||||||    
T  30217124 atttccataagctctccaggatagcttatgaaagcagcttatagatta 30217077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 35135727 - 35135802
Alignment:
Q  93 cttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcacttata 167  Q
    ||||||| ||||||||||| ||||||||||| |||| ||   ||||||||||||| ||||| ||||| ||||||||    
T  35135727 cttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttata 35135802  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 8985698 - 8985636
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||  ||||||| ||||||||| |||||  | |||||||||||| |||||||||||    
T  8985698 cataagctctataggatagcttatgaaaatagcttgcaaattatatgaaaatagtttgacttt 8985636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 28586763 - 28586866
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||| ||||||| ||||||||  ||||  |||  |||||||||  ||||||| |  | |||||||||||||  ||||||||||| ||||||||||    
T  28586763 ttatgacatatccgtaagctgttttcagctta--tttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactt 28586860  T
Q  123 tctttt 128  Q
    | ||||    
T  28586861 tatttt 28586866  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 29054950 - 29054896
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaa 110  Q
    |||| |||||||||| || ||||||||||| ||||| ||||||| ||||||||||    
T  29054950 atttccataagctctacatgatagtttatggaaacaacttatagcttatatgaaa 29054896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 32197762 - 32197720
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  32197762 attttcataagttcttcaggatagcttatggaaacagcttata 32197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 36639595 - 36639528
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacag 92  Q
    ||||||| ||||| |||  ||||||| |||||  ||||||||||||||||| ||||| ||||||||||||    
T  36639595 ttatgacgtgtccataagttgttttcctctta--ttttcataagctcttcaagatagcttatgaaaacag 36639528  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 18286816 - 18286779
Alignment:
Q  73 aggatagtttatgaaaacagcttatagattatatgaaa 110  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  18286816 aggatagtttatgaaaacagcttatagctaatatgaaa 18286779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 36181219 - 36181260
Alignment:
Q  70 ttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  36181219 ttcaggatagtttatgaaaacagattataatttatatgaaaa 36181260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 41929729 - 41929770
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  41929729 ttttcataagctcctcatgatagtttatgaaaacaacttata 41929770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 2568700 - 2568644
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaa 112  Q
    |||||||| |||||| || ||||| ||||||||||| ||||||| ||||| ||||||    
T  2568700 attttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaaa 2568644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 3970708 - 3970780
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||| ||| |||| ||||||||  ||||| ||||||||| ||||  || |||||||| ||||    
T  3970708 attttcataagctctccagtatagcttatgaaattagcttctagattataagaaagcagattgactttatttt 3970780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 12425613 - 12425541
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| ||| || ||||| || |||||||||||||||| ||||| ||||| | ||| ||||| ||||    
T  12425613 attttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttatttt 12425541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 36539780 - 36539716
Alignment:
Q  64 aagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| |||  |||| |||||| ||||||| ||||||||||| || |||||||| ||||    
T  36539780 aagctcttcagaataacttataaaaacaacttatagcttatatgaaaacaggttgactttatttt 36539716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 41016221 - 41016149
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||| | || ||| | || |||||||| ||||||| ||||||||||| ||||||| ||| ||||    
T  41016221 attttcataagctttccatgatggcttgtgaaaacaacttatagcttatatgaaaacagtttgaatttatttt 41016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 24887270 - 24887408
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||||||||  ||| ||||||||  ||||  ||  |||||||||| |||||||| ||||||||||||||| ||| ||||||||| |    
T  24887270 atggaaacaatttatgacatgtcattaa-ctgttttcagctta--ttcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaata 24887366  T
Q  112 aagtttgactttcttttgtc-aatgttatagaaataacttat 152  Q
     ||||||||||| |||| || | ||||||||||||| |||||    
T  24887367 cagtttgactttattttatctattgttatagaaatagcttat 24887408  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 36101610 - 36101499
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattc 154  Q
    ||||||||||||||||||||||||| ||   ||||| ||||||||||||| ||||  ||||||||||| |||| ||  || ||| ||||||| |||||||    
T  36101610 attttcataagctcttcaggatagtataatgaaacaacttatagattatacgaaatcagtttgactttattttatcttatattacagaaatagcttattc 36101511  T
Q  155 ataagcacttat 166  Q
    |||| |||||||    
T  36101510 ataaccacttat 36101499  T

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Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 20502066 - 20502157
Alignment:
Q  24 tatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagttt 117  Q
    |||||||||||||| |  |||||||  ||||  || |||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||    
T  20502066 tatgacatgtccgtcatttgttttcagctta--ttctcataagctcttcaggatagcttatgaaaacagcttatagcgtatatgaaaacagttt 20502157  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 27290898 - 27291039
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||||| || ||| ||||||||  ||||  ||| ||| | |||| |||||||| | ||| ||||||||| |||||||||||||||||||| || ||    
T  27290898 ttatgacatgcccataagctgttttcagctta--tttccatgaactctgcaggatagctaatgcaaacagcttttagattatatgaaaaaagttcgaatt 27290995  T
Q  123 tcttttgtcaatgttatagaaataacttattcataagcacttata 167  Q
    | |||| ||  ||||||||||||| ||||| | ||||||||||||    
T  27290996 tattttatc-ttgttatagaaataccttatacctaagcacttata 27291039  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 25453887 - 25453959
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||| | |||||||||||||||||| || |||||| ||||| ||||| ||||||||||| ||||    
T  25453887 attttcataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgactttatttt 25453959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 33405163 - 33405250
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||| |||| | ||||||||||||  ||||| ||| |||||| |||||| ||||| ||||||||||||||||||| |||||||||||    
T  33405163 ttatgatatgttcataaactgttttcggcttaacttt-cataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaa 33405250  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 3044248 - 3044384
Alignment:
Q  15 gaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaag 114  Q
    ||||||| ||||||||||| | ||| ||||||||  ||||  |||||||||||||| |||| |||  || |||||||| |||||||||||||||||| ||    
T  3044248 gaaacaacttatgacatgttcataagctgttttcaactta--ttttcataagctctccaggttagcataagaaaacaggttatagattatatgaaaacag 3044345  T
Q  115 tttgactttcttttgtcaat-gttatagaaataacttat 152  Q
     |||  ||| |||||||  | ||||||||||||| ||||    
T  3044346 attggttttattttgtctttcgttatagaaataatttat 3044384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 24158531 - 24158642
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt-cttttgtca-atgttatagaaataacttatt 153  Q
    |||| |||||||||| |||||||| |||||||||||||||||   ||||||  ||| ||||| ||||| ||||  |||  |||||||||||||||||||     
T  24158531 atttccataagctctccaggatagcttatgaaaacagcttattacttatat--aaacagtttcactttactttattcatttgttatagaaataacttata 24158628  T
Q  154 cataagcacttata 167  Q
    ||||||||||||||    
T  24158629 cataagcacttata 24158642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 20192664 - 20192744
Alignment:
Q  86 aaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcactta 165  Q
    ||||||||||||||||||||||||||  |||||||||| |||| ||   ||||||| ||||| ||||| ||||||||||||    
T  20192664 aaaacagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 52619083 - 52618990
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||| | ||| || |||||  ||||  |||||| |||||||||| ||||| || |||||||||||||||  |||||||||||    
T  52619083 aaacaatttatgacatgttcataagctattttcacctta--ttttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaa 52618990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 36139920 - 36139809
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattc 154  Q
    |||||||||||||||||| |||||| ||   ||||| ||||||| ||||| ||||  ||||||||||| |||| ||  || ||| ||||||| |||||||    
T  36139920 attttcataagctcttcaagatagtataatgaaacaacttatagcttatacgaaatcagtttgactttattttatcttatattacagaaatagcttattc 36139821  T
Q  155 ataagcacttat 166  Q
    |||| |||||||    
T  36139820 ataaccacttat 36139809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 27792908 - 27792802
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagc 160  Q
    ||||||||| || ||||||||||||||||| |||  || ||||||||||| |||||||| || |||| ||   |||| | |||||| ||||| |||||||    
T  27792908 ataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagc 27792809  T
Q  161 acttata 167  Q
    |||||||    
T  27792808 acttata 27792802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 33965522 - 33965591
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatag--attatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||| ||||| ||||||||||| |||||||   ||||||||||| ||||||||||| ||||    
T  33965522 cataagctcttcaagatagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttatttt 33965591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 2201143 - 2201098
Alignment:
Q  83 atgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  2201143 atgaaaacagcttatagcttatatgaaaacagtttgactttgtttt 2201098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 20874339 - 20874387
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||| || ||||||| ||||||||||||||||||| |||||||||||    
T  20874339 taagctatttaggatagcttatgaaaacagcttatagtttatatgaaaa 20874387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 22232868 - 22232756
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtca-atgttatagaaataacttattc 154  Q
    |||||||||||| || || ||||| ||||||||| ||||||    ||||||||||| ||||||||||| |||| |||  ||||||| ||||| ||||| |    
T  22232868 attttcataagccctacatgatagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatac 22232769  T
Q  155 ataagcacttata 167  Q
    || |||| |||||    
T  22232768 atgagcatttata 22232756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 43875684 - 43875624
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||| || ||||| ||||||||||| ||||||| |||||||| || ||||||||||    
T  43875684 ataagctctccatgatagcttatgaaaacaacttatagcttatatgagaacagtttgactt 43875624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 47904098 - 47904146
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||| ||||| ||||||||||  |||||||||||||||||||    
T  47904098 taagctcttcacgatagcttatgaaaaccacttatagattatatgaaaa 47904146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 43115140 - 43115048
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatat 106  Q
    |||||||||| ||||||||||||| |||  |||||||  |||  |||| ||||||||||  | ||||||| ||||||||| ||||||| ||||||    
T  43115140 atggaaacaacttatgacatgtccataacttgttttcagctt--atttccataagctctcaatgatagttcatgaaaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 1217788 - 1217883
Alignment:
Q  14 ggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||  ||||||||||||| |||  ||||||| |||||   ||||||||| |||  ||||||| ||||||||||||||||||  ||| |||||||    
T  1217788 ggaaacagcttatgacatgtccataagttgttttcatcttac--tttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaa 1217883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 33674710 - 33674792
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattcataagcacttat 166  Q
    ||||||||||||||||||| ||||||| ||||| ||| ||||| ||||||   ||||||||||||| |||||  |||||| |||||    
T  33674710 ttatgaaaacagcttatagtttatatgcaaaaaatttaacttt-ttttgt--ttgttatagaaatagcttataaataagcgcttat 33674792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 38462305 - 38462251
Alignment:
Q  74 ggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| |||||||||||| ||||||  |||||||||| ||||||||||| ||||    
T  38462305 ggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttatttt 38462251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 54775211 - 54775061
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||| || |||||  |||||| ||| ||| |||| |||||  ||||||||| |||| || ||||  ||| |||||||||||||| ||||||| ||||    
T  54775211 atggaaataacttatgttatgtccataagctgctttcatctta--ttttcataaactctccatgataacttacgaaaacagcttata-attatataaaaa 54775115  T
Q  112 aagtttgactttcttttgtcaat-gttatagaaataacttattcataagcactt 164  Q
      |||||||||| |||| ||  | |||||||||||||||||  | |||||||||    
T  54775114 tggtttgactttattttatcttttgttatagaaataacttaaacgtaagcactt 54775061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 1395689 - 1395604
Alignment:
Q  80 tttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcactt 164  Q
    ||||||||||||| | |||| ||||||||||| | ||||||||| |||| ||   ||||||||||||| ||||| |||| ||||||    
T  1395689 tttatgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 19679375 - 19679428
Alignment:
Q  75 gatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||| |||||| ||||||| ||||| ||||| ||||||||||| ||||    
T  19679375 gatagtttataaaaacaacttatagcttataagaaaacagtttgactttatttt 19679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 22203472 - 22203423
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||| ||| || ||||| ||||||||||| |||||||||||||    
T  22203472 attttcataagttctccaagatagcttatgaaaacaacttatagattata 22203423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 22343650 - 22343589
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagttt 117  Q
    |||| ||||| |||||||| |||| ||||| ||||||||||||  ||||||||||| |||||    
T  22343650 atttgcataatctcttcagtatagcttatggaaacagcttataacttatatgaaaacagttt 22343589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 28306193 - 28306128
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||| | |||| ||||||||||| ||| ||  ||||||||||| ||||||||||| ||||    
T  28306193 taagctcttctgtatagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttatttt 28306128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 1816625 - 1816553
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||| ||||||||| ||| |||| ||||||||||| ||||||  |||||  |||| ||||||||||| ||||    
T  1816625 attttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttatttt 1816553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 2071098 - 2071058
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagctta 96  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  2071098 attttcataagctcttcatcatagcttatgaaaacagctta 2071058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 2197878 - 2197806
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||| || || |  ||||||||| ||||||| | ||||||||||| ||||||| ||| ||||    
T  2197878 attttcataagctctccaagacaagttatgaaaatagcttattgcttatatgaaaatagtttgattttatttt 2197806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 19679807 - 19679855
Alignment:
Q  75 gatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||||||||| | ||||| ||||||||||| ||| |||||||    
T  19679807 gatagtttatgaaaacaacctatagcttatatgaaaacagtatgacttt 19679855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 21367709 - 21367637
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| ||| || ||||| ||||||||||| |||||| |||||| ||||| | ||| ||||| ||||    
T  21367709 attttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 21872315 - 21872363
Alignment:
Q  72 caggatagtttatgaaaacagcttatagattatatgaaaaaagtttgac 120  Q
    |||||||| ||||||||||| ||||||| |||||| |||||| ||||||    
T  21872315 caggatagcttatgaaaacaacttatagcttatatcaaaaaaatttgac 21872363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 23315668 - 23315596
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||||||||| || |||| ||||| ||||| |||||||  |||||||||| | ||||||||| ||||    
T  23315668 atttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttatttt 23315596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 24785247 - 24785175
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||||||||  ||||||| |||||||||||  ||||||||||||  |||| || |||||||| ||||    
T  24785247 atttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttatttt 24785175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 32064481 - 32064410
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||||||||| ||||||||||||||| ||| | ||||| || ||| |||| | ||||||||| ||||    
T  32064481 attttcataagctctttaggatagtttatgaacacaacatatag-ttttataaaaataatttgactttatttt 32064410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 42753631 - 42753575
Alignment:
Q  73 aggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttg 129  Q
    ||||||| || | |||||| ||||||| |||||||||||| |||||||||| |||||    
T  42753631 aggatagcttgtaaaaacaacttatagcttatatgaaaaatgtttgactttgttttg 42753575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 52440689 - 52440745
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||| |||||| ||||  ||||||||| ||||||||| |||| ||||||    
T  52440689 aattttcataagttcttcaagataaattatgaaaatagcttatagcttatttgaaaa 52440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 6231802 - 6231912
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||| | ||||||||||| ||||||||||||  ||||  |||  ||||| |||||||| ||| ||| |||||||||||||||||||||||||||    
T  6231802 atggaaacaactaatgacatgtccataaactgttttcagctta--tttctataagttcttcaggttagcttacgaaaacagcttatagattatatgaaaa 6231899  T
Q  112 a-agtttgacttt 123  Q
    | |||||||||||    
T  6231900 acagtttgacttt 6231912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 33527178 - 33527286
Alignment:
Q  59 ttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcata 157  Q
    |||||||| |||  ||||||  ||||||||||||||||||||||||||||||| ||||||||| | |||| ||   |||| |||||||| ||||||||||    
T  33527178 ttcataagatctcgaggataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcata 33527277  T
Q  158 agcacttat 166  Q
    ||| |||||    
T  33527278 agcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 17269285 - 17269180
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagca 161  Q
    |||||||| |||||||| ||||||||||| ||||| | ||||||||||| | ||||||||| ||||  |   |||| |||||||||||||| ||||||||    
T  17269285 taagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagca 17269186  T
Q  162 cttata 167  Q
    ||||||    
T  17269185 cttata 17269180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 7218102 - 7218174
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||| | ||||||||| ||||    
T  7218102 attttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttt 7218174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 44422741 - 44422646
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttat 152  Q
    ||||||||||||||| |||||||| |||| |||| ||||||||| ||||||||||| |||||||  || |||| || |||||||| ||||| |||||    
T  44422741 attttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttgagattattttatc-atgttataaaaatagcttat 44422646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 48830113 - 48830207
Alignment:
Q  65 agctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattcataa 158  Q
    ||||||| || |||| |||||||||||| |||||| ||||||||||| ||||||||||| |||| ||  | || ||||||||||||||| |||||    
T  48830113 agctctttagaatagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataa 48830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 4078177 - 4078242
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgact 121  Q
    |||||||| |||||  || ||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  4078177 attttcattagctcgccatgatagcttatgaaaacaacttatagattatatgaaaatagtttgact 4078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 37272625 - 37272686
Alignment:
Q  67 ctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||||| |||||||||||||||||||| ||||||||||| || |||||||| ||||    
T  37272625 ctctccaggataatttatgaaaacagcttatagcttatatgaaaacagattgactttatttt 37272686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 10854775 - 10854663
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattc 154  Q
    |||||| |||||| ||||||||||| |||||||||| | |||||||||||  |||  ||||||||||| |||| ||   | ||  |||||||||||||||    
T  10854775 attttcttaagctgttcaggatagtatatgaaaacaacatatagattatacaaaatcagtttgactttattttatcttgtatttcagaaataacttattc 10854676  T
Q  155 ataagcacttata 167  Q
    |||| ||||||||    
T  10854675 ataaccacttata 10854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 43771921 - 43771885
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttc 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  43771921 atggaaacaatttatgacatgtccgtaaactgttttc 43771885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 30257757 - 30257653
Alignment:
Q  22 tttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgact 121  Q
    |||||||||||| | ||| ||||||||  ||||  |||  |||||| || |||||||||||||||||||| |||| || ||||||| ||| |||||||||    
T  30257757 tttatgacatgttcataagctgttttcagctta--tttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgact 30257660  T
Q  122 ttctttt 128  Q
    || ||||    
T  30257659 ttatttt 30257653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 47960660 - 47960715
Alignment:
Q  64 aagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttga 119  Q
    |||||||||||||||  |||||||||| |||||||| ||||||||||| |||||||    
T  47960660 aagctcttcaggataacttatgaaaacggcttatagcttatatgaaaatagtttga 47960715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 4622179 - 4622072
Alignment:
Q  10 taatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaa 109  Q
    |||||| ||||  ||||||||||||| ||| |||||||   ||||  |||||| ||||||| || |||||  |||| ||||||||||||| |||||||||    
T  4622179 taatgggaacatcttatgacatgtccataagctgtttttagctta--ttttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaa 4622082  T
Q  110 aaaagtttga 119  Q
    || |||||||    
T  4622081 aagagtttga 4622072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 25005826 - 25005880
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||| ||||||||| |||||||| ||||||||||| ||||||| |||||||||||    
T  25005826 tttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 25005880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 27887115 - 27887218
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||| |||| ||||||   ||||  |||| ||| ||||| || ||||||||||||||||| ||||||| ||||||| |||  |||||||||    
T  27887115 ttatgacatgtccataaattgtttttagctta--tttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaattgtttgactt 27887212  T
Q  123 tctttt 128  Q
    | ||||    
T  27887213 tatttt 27887218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 29723575 - 29723440
Alignment:
Q  10 taatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaa 109  Q
    |||||||||||  ||||||||||||| ||||||||||||  |||  |||| ||||| | || |||| ||| || ||||| || |||||||  ||||||||    
T  29723575 taatggaaacagcttatgacatgtccataaactgttttcaactt--atttacataaccactgcagggtagcttgtgaaagcaacttatagcatatatgaa 29723478  T
Q  110 aaaagtttgactttcttttgtcaatgttatagaaataa 147  Q
    || ||||||| ||| |||| ||   |||||||||||||    
T  29723477 aatagtttgagtttattttatcttcgttatagaaataa 29723440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 4363671 - 4363724
Alignment:
Q  67 ctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgac 120  Q
    ||||||||||||| ||||||||| || |||||| ||||||||||| ||||||||    
T  4363671 ctcttcaggatagcttatgaaaataggttatagcttatatgaaaacagtttgac 4363724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 4700094 - 4700143
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  4700094 attttcataagctctccaggatagtttataaaaacagtttatagcttata 4700143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 7137026 - 7137075
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||| ||| || ||||| |||||||||||||||||||||||||    
T  7137026 attttcataagttctccaagatagcttatgaaaacagcttatagattata 7137075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 7472353 - 7472304
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||||||||    
T  7472353 attttcataagctctccaagatagcttatggaaacagcttatagattata 7472304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 10199436 - 10199533
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttat 152  Q
    |||||||||||||||  |  |||| ||||||||| ||||||| ||||||| ||||| ||||||||||| |||| ||    ||||||||||||||||||    
T  10199436 attttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatcttgggttatagaaataacttat 10199533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 34290278 - 34290229
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| |||||    
T  34290278 attttcataagttcttcaagatagcttatgaaaacagcttatagcttata 34290229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 10581125 - 10581177
Alignment:
Q  76 atagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  10581125 atagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttatttt 10581177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 11695945 - 11695848
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||| |||||||||||||| ||| ||||||||  |||  ||||||||||||| | ||| ||||| ||| ||||||  |||||| |||| ||||||    
T  11695945 atggaaacagtttatgacatgtccataagctgttttcaactt--attttcataagctttccagaatagtctataaaaacattttatagcttatttgaaaa 11695848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 30259475 - 30259624
Alignment:
Q  15 gaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatag-tttatgaaaacagcttatagattatatgaaaaaa 113  Q
    ||||||| ||| ||||||||  |||| |||||||  ||||  ||| |||||||||| || ||||| |||||| ||||||||||||| |||||| |||  |    
T  30259475 gaaacaacttacgacatgtcaataaattgttttcaactta--tttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagca 30259572  T
Q  114 gtttgactttcttttgt-caatgttatagaaataacttattcataagcactt 164  Q
    |||||||||| |||| |    ||||||||||||| ||| | |||||||||||    
T  30259573 gtttgactttattttatattttgttatagaaatagcttgtgcataagcactt 30259624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 34179900 - 34179972
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||| || ||||||||||||||||||||||| |||||| ||| || |||| | ||||||||| ||||    
T  34179900 atttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttatttt 34179972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 49517087 - 49517015
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttat 152  Q
    ||||||||||||||||||| ||| ||||||| | ||||||||| |||| ||   |||||||||||||||||||    
T  49517087 ttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttat 49517015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 4549313 - 4549217
Alignment:
Q  13 tggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||||||||||||||  |||  |||||||  |||  |||| |||||||| | | ||||||||| ||||| |||||||||| |||||| ||||    
T  4549313 tggaaacaatttatgacatgtctataagttgttttcagctt--atttccataagctatcctggatagtttgtgaaagcagcttatagcttatataaaaa 4549217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 7273968 - 7274079
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattca 155  Q
    |||| |||||||||||| | ||||||||| ||||||||||||  || |||||||| | ||||||||| |||  ||   ||||||| ||||||| ||| ||    
T  7273968 ttttaataagctcttcaaggtagtttatggaaacagcttataacttgtatgaaaacaatttgactttatttcatcttttgttataaaaataacatataca 7274067  T
Q  156 taagcacttata 167  Q
    |||||| |||||    
T  7274068 taagcatttata 7274079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 24913505 - 24913438
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||||| || ||||  ||||||||||||| ||||||||||||  |||||||||| || ||||||||    
T  24913505 attttcatgaggtcttgtggatagtttatgagaacagcttatagcatatatgaaaatagcttgacttt 24913438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 31517730 - 31517822
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaa 110  Q
    |||||| | ||||||||| | ||| ||||||||  ||||  |||||||||||||| || || || ||||||| ||||||||||| ||||||||||    
T  31517730 aaacaactcatgacatgttcataagctgttttcagctta--ttttcataagctctccaagacagattatgaagacagcttatagcttatatgaaa 31517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 35017618 - 35017563
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||| |||||||||| ||||| || ||||||||||||| ||||||||||| |||||    
T  35017618 atttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaa 35017563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 3924666 - 3924604
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttg 118  Q
    |||| ||||| ||||||||||||| |||| |||||| || |||||||||| ||||| ||||||    
T  3924666 atttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaacagtttg 3924604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 15361730 - 15361688
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||||||||||| ||||||||||| | |||||||||    
T  15361730 ttatgaaaacagcttatagcttatatgaaaataatttgacttt 15361688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 25006068 - 25006134
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||| ||| || ||||| ||||||||||| ||||||| ||||||||||| | ||||||||| ||||    
T  25006068 ataagatctccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttt 25006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 4549576 - 4549637
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||| |||||| | ||||||||||| ||||||| || |||||||| ||||| |||||    
T  4549576 ataagctctccaggattgcttatgaaaacatcttatagcttgtatgaaaacagttttacttt 4549637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 6292566 - 6292468
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||| | ||| ||||||||  ||||  |||||||||||||| ||  |||||||| ||||| ||||||||  |||| |||||| | ||||||||    
T  6292566 ttatgacatgttcataagctgttttcagctta--ttttcataagctctccaaaatagtttacgaaaatagcttataagttatgtgaaaataatttgactt 6292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 16322891 - 16322826
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgact 121  Q
    |||| |||||||||||||  ||||  |||||||||||||||||  || |||||||| |||||||||    
T  16322891 atttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgact 16322826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 25479623 - 25479570
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaa 109  Q
    |||||||||||||||  ||||||| ||||||||||| |||||||  ||||||||    
T  25479623 attttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaa 25479570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 29007771 - 29007840
Alignment:
Q  83 atgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataactta 151  Q
    ||||||||| ||||||| ||||||||||| |||||||||||  ||| ||   ||||||||||||||||||    
T  29007771 atgaaaacaacttatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataactta 29007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 44032026 - 44032099
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||| ||||||||||||| ||||  ||| ||||| || |||||| ||||||||||| | ||||||||| ||||    
T  44032026 aatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttatttt 44032099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 4019620 - 4019731
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattc 154  Q
    ||||| ||||| || ||||| |||| |||||||| |||||||||| ||| |||||||   ||||||||  |||| ||| |  ||||||||| ||||||||    
T  4019620 aatttccataaactattcagaatagcttatgaaa-cagcttatagcttacatgaaaactatttgacttgattttatcatttgtatagaaattacttattc 4019718  T
Q  155 ataagcacttata 167  Q
    |||| || |||||    
T  4019719 ataaacatttata 4019731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 5592713 - 5592765
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatga 108  Q
    |||||||||||||||| ||  ||| ||||||||||| ||||||| ||||||||    
T  5592713 attttcataagctcttaagactagcttatgaaaacaacttatagcttatatga 5592765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 6074509 - 6074449
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||||| ||| ||| ||||||| || |||| ||||||||||| ||||| |||||    
T  6074509 taagctcttcaggctagcttaagaaaacaactcatagcttatatgaaaacagtttaacttt 6074449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 8130459 - 8130411
Alignment:
Q  75 gatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||| ||||||||||| ||||||| |||| |||||| |||||||||||    
T  8130459 gatagcttatgaaaacaacttatagcttatgtgaaaacagtttgacttt 8130411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 9656676 - 9656620
Alignment:
Q  72 caggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||| ||||||| ||||||||||| ||||||||||| | ||| ||||| ||||    
T  9656676 caggatagcttatgaacacagcttatagcttatatgaaaataatttaactttatttt 9656620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 15360899 - 15360827
Alignment:
Q  93 cttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcactt 164  Q
    ||||||| ||||||||||| ||||||||||| |||| ||   |||||||||||||||| || ||||| |||||    
T  15360899 cttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 36151496 - 36151605
Alignment:
Q  17 aacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtt 116  Q
    |||| |||||||||||||| ||| ||||||||  ||||  |||||||||||||   ||||| ||||| |||||||  |||||  ||||| ||||| | ||    
T  36151496 aacagtttatgacatgtccataacctgttttcaactta--ttttcataagctcactaggattgtttacgaaaacaatttataacttatacgaaaacaatt 36151593  T
Q  117 tgactttctttt 128  Q
    ||||||| ||||    
T  36151594 tgactttatttt 36151605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 37818427 - 37818395
Alignment:
Q  134 tgttatagaaataacttattcataagcacttat 166  Q
    ||||||||||||||||||| |||||||||||||    
T  37818427 tgttatagaaataacttatacataagcacttat 37818395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 39347995 - 39348047
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatga 108  Q
    |||| |||||||| | |||||||||||||||||||| ||||||| || |||||    
T  39347995 atttccataagctttgcaggatagtttatgaaaacaacttatagcttgtatga 39348047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 43332526 - 43332486
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagctta 96  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  43332526 attttaataagctcttcaagatagcttatgaaaacagctta 43332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 52286720 - 52286608
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattc 154  Q
    |||| ||||| ||||||| |||   ||||||||| || |||||| |||||||||||  |||| ||||| |||| ||  | ||| |||||||| |||||||    
T  52286720 atttccataaactcttcaagatgacttatgaaaatagtttatagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattc 52286621  T
Q  155 ataagcacttata 167  Q
    |||||| ||||||    
T  52286620 ataagcgcttata 52286608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 27599 - 27508
Alignment:
Q  75 gatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcactta 165  Q
    ||||||||||||||||| ||||||| ||||||||||| | ||||||||| |||| ||   ||||||||||||||||||| ||||||||||||    
T  27599 gatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcactta 27508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 4006756 - 4006645
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtca-atgttatagaaataacttattc 154  Q
    |||||||||| ||||   |||||| ||||||||||| ||||||| |||||| |||| | ||||||||| |||| |||  ||||||||||||| ||||| |    
T  4006756 attttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgc 4006657  T
Q  155 ataagcacttat 166  Q
    ||||||||||||    
T  4006656 ataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 3528883 - 3528779
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagt 115  Q
    |||||| ||||||||||||| |||  ||||||| |||||  |||||||||||||| || ||||||| |||||||| |  ||||  |||||||| ||||||    
T  3528883 aaacaacttatgacatgtccataacttgttttcatctta--ttttcataagctctccaagatagttcatgaaaacggtctataatttatatgagaaaagt 3528786  T
Q  116 ttgactt 122  Q
    |||||||    
T  3528785 ttgactt 3528779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 4246493 - 4246397
Alignment:
Q  13 tggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||| | ||||||||||| ||| ||||||||  ||||  |||| ||| ||||| ||  |||| |||||||||||||||||||||||||||||||    
T  4246493 tggaaacaactcatgacatgtccataagctgttttcaactta--tttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaa 4246397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 2117439 - 2117373
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||  ||||||  ||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  2117439 ataagctctctaggataacttatgaaaacaacttatagattatatgaaaatagtttgactttgtttt 2117373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 1498023 - 1497951
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||| || ||||||||||||||||  ||||||  | ||||||||| ||||||||||| ||||    
T  1498023 attttcataagctctccaagatagtttatgaaaacttcttataactcatatgaaaacagtttgactttatttt 1497951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 31671102 - 31671174
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||| |  ||||||||||| ||||||||||||||| ||||||||||| | ||| ||||| ||||    
T  31671102 attttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgtttt 31671174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 10616527 - 10616635
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||| |||||||||||||||||  ||| |||  ||||  |||| ||||||||| ||  |||| |||| ||||| |||||||  |||||||||||    
T  10616527 atggaaacaacttatgacatgtccgtaagttgtgttcagctta--tttttataagctctccaaaatagcttattaaaacggcttatattttatatgaaaa 10616624  T
Q  112 aagtttgactt 122  Q
    || ||||||||    
T  10616625 aactttgactt 10616635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 33911310 - 33911361
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatg 107  Q
    ||||||| || || ||||||||||||||||||||||||||||| ||||||||    
T  33911310 attttcacaaacttttcaggatagtttatgaaaacagcttataaattatatg 33911361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 29837111 - 29837145
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaa 89  Q
    |||||||||||||||||||||||||||||||||||    
T  29837111 aattttcataagctcttcaggatagtttatgaaaa 29837145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 7009741 - 7009786
Alignment:
Q  216 taggtgtggcctcctattggcaagaagaagtttgagactctttcat 261  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||    
T  7009741 taggtgtggccaccaattggcaagaagaagtttgagacactttcat 7009786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 281832 - 281948
Alignment:
Q  10 taatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaa 109  Q
    |||||||| ||| ||||||||||||  |||  |||||||  ||||  ||| ||| ||||||  ||||||| ||||||| ||||||||||| |||||||||    
T  281832 taatggaagcaacttatgacatgtctataagttgttttcagctta--tttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaa 281929  T
Q  110 aaaagtttgactttctttt 128  Q
    || |  |||||||| ||||    
T  281930 aacaagttgactttatttt 281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 1275191 - 1275136
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||| |||||||||| |||||||   |||||||||||||||||| |||||||||||    
T  1275191 atttccataagctctccaggataacatatgaaaacagcttatagcttatatgaaaa 1275136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 2027459 - 2027506
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| ||||    
T  2027459 ttatgagaacagcttataggttatatgaaaatagtttgactttatttt 2027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 3155209 - 3155146
Alignment:
Q  65 agctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| |||||||  ||||||||| ||||||||| ||||||| ||| ||||||||||| ||||    
T  3155209 agctctccaggatatcttatgaaaatagcttataggttatatggaaacagtttgactttgtttt 3155146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 13907889 - 13907822
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||||||||||||||| ||||| || |||||||| |||| ||||| ||  |||| |||||||||||    
T  13907889 attttcataagctcttcaagatagcttttgaaaacaacttacagattttacaaaaacagtttgacttt 13907822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 18264371 - 18264304
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||| ||||| ||||||||||||||||| ||||| ||||||||  || |||||||| | |||||||||    
T  18264371 atttccataacctcttcaggatagtttaagaaaatagcttataacttgtatgaaaacaatttgacttt 18264304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 5329057 - 5328907
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||| || |||||  |||||| ||| ||| |||| |||||  ||||||||| |||| || ||||  ||| |||||||||||||| ||||||| ||||    
T  5329057 atggaaataacttatgttatgtccataagctgctttcatctta--ttttcataaactctccatgataacttacgaaaacagcttata-attatataaaaa 5328961  T
Q  112 aagtttgactttcttttgtcaat-gttatagaaataacttattcataagcactt 164  Q
      |||||||||| |||| ||  | |||||||||||||||||  | |||||||||    
T  5328960 tggtttgactttattttatcttttgttatagaaataacttaaacgtaagcactt 5328907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 7149507 - 7149553
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatga 108  Q
    ||||||||| |||||||||||||||||| || |||||| ||||||||    
T  7149507 ataagctctccaggatagtttatgaaaatagtttatagcttatatga 7149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 10861000 - 10860958
Alignment:
Q  69 cttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||    
T  10861000 cttcaggatagcttatgaaaatagcttatagattatacgaaaa 10860958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 27894119 - 27894017
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||| |||||| ||||||||||||  ||||  |||||||||||| |||| ||||  ||||||||||| || |||| |||||| |||| | ||||||||    
T  27894119 ttatgatatgtccataaactgttttcagctta--ttttcataagcttttcaagatatcttatgaaaaca-ctaatagtttatattaaaacaatttgactt 27894023  T
Q  123 tctttt 128  Q
    | ||||    
T  27894022 tatttt 27894017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 725645 - 725755
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagt 115  Q
    |||||| |||||||||||||||| ||| |||||  |||  |||| |||||||||||  | |||| |||  |||||| | ||||| |||||| |||| |||    
T  725645 aaacaacttatgacatgtccgtagactattttcagctt--atttccataagctctttcgaataggttacaaaaacaacatatagtttatataaaaacagt 725742  T
Q  116 ttgactttctttt 128  Q
    |||||||| ||||    
T  725743 ttgactttttttt 725755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 2168058 - 2167989
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctt 126  Q
    |||||||||||||| |||||||||||||||| ||| || |||  ||| | ||||| |||||||| |||||    
T  2168058 ttttcataagctctccaggatagtttatgaagacatctcataacttacacgaaaacagtttgacattctt 2167989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 2179691 - 2179622
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctt 126  Q
    |||||||||||||| |||||||||||||||| ||| || |||  ||| | ||||| |||||||| |||||    
T  2179691 ttttcataagctctccaggatagtttatgaagacatctcataacttacacgaaaacagtttgacattctt 2179622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 2735111 - 2735062
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||| | |||| ||| | |||||||||||||||||||||||||    
T  2735111 attttcataagttgttcaagattgcttatgaaaacagcttatagattata 2735062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 5550148 - 5550107
Alignment:
Q  82 tatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  5550148 tatgaaaacagcttatagcttatatgaaaacaatttgacttt 5550107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 24838777 - 24838826
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||| || ||||| |||||||| |||||||||| |||||||||||    
T  24838777 ataagctctccatgatagcttatgaaatcagcttatagcttatatgaaaa 24838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 29274282 - 29274363
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagca 161  Q
    |||||||||||| |||||| ||||||||||| | ||||||||| |||| ||   || |||||||||| ||||| ||||||||    
T  29274282 ttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 31324498 - 31324437
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagttt 117  Q
    ||||| |||||||||||| ||||| |||||||  |||||||||| ||| ||||||| |||||    
T  31324498 attttaataagctcttcatgatagcttatgaatgcagcttatagcttacatgaaaatagttt 31324437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 33887872 - 33887771
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattc 154  Q
    |||| |||||||  |||||||||| |||||||||||| |||| |||||||  |||| ||||||| ||| |||| ||   ||||||| ||||| |||||||    
T  33887872 atttccataagcatttcaggatagcttatgaaaacagtttattgattatactaaaacagtttgagtttgttttatcttgtgttataaaaatatcttattc 33887773  T
Q  155 at 156  Q
    ||    
T  33887772 at 33887771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 1401146 - 1401102
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    |||||||||| || ||||| ||||||||||||||||||| |||||    
T  1401146 cataagctctccatgatagcttatgaaaacagcttatagcttata 1401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 8420225 - 8420337
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtca-atgttatagaaataacttattc 154  Q
    |||| |||||||||| ||  |||| ||| || |||||||||||  |||||| || | ||||||||||| |||| |||  | ||| ||||||||||| | |    
T  8420225 atttccataagctctccattatagcttacgagaacagcttatattttatataaacacagtttgactttattttatcatttattaaagaaataacttgtac 8420324  T
Q  155 ataagcacttata 167  Q
    |||||||||||||    
T  8420325 ataagcacttata 8420337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 10400311 - 10400239
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||  |||||||  ||||||| ||| ||||||| |||||||| || | ||||||||| ||||    
T  10400311 attttcataagctcaccaggatatcttatgaagacatcttatagcttatatgataacaatttgactttatttt 10400239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 13907457 - 13907409
Alignment:
Q  59 ttcataagctcttcaggatagtttatgaaaacagcttatagattatatg 107  Q
    ||||||||||||| ||||||| ||||||||||| |||| | ||||||||    
T  13907457 ttcataagctctttaggatagcttatgaaaacaacttacaaattatatg 13907409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 33787773 - 33787845
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||||||||| || ||||  ||||||||||||||||||  ||||||||||  | ||||||||| ||||    
T  33787773 atttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgtttt 33787845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 28803539 - 28803646
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataag 159  Q
    |||||||||| |||||||||||| ||||||| ||| ||| ||||||||||  ||||||||||| |||| ||   |||||| ||||||||||||  |||||    
T  28803539 cataagctctccaggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataag 28803638  T
Q  160 cacttata 167  Q
    ||||||||    
T  28803639 cacttata 28803646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 33256813 - 33256710
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||| | ||||||||| ||  ||||  |||||||| | |||||||||| | |||||||||| |||||||| ||||||||||| ||||||||||    
T  33256813 ttatgacatgttcataaactgttctcagctta--ttttcatacggtcttcaggatggcttatgaaaactgcttatagtttatatgaaaacagtttgactt 33256716  T
Q  123 tctttt 128  Q
    | ||||    
T  33256715 tatttt 33256710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 10143209 - 10143103
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattcataag 159  Q
    ||||| |||| || ||||| ||||||||| | ||||||| |||||| |||| ||||||||||  |||| ||  | |||||||||||||||||| ||||||    
T  10143209 cataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataag 10143110  T
Q  160 cacttat 166  Q
    |||||||    
T  10143109 cacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 43141953 - 43141846
Alignment:
Q  14 ggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaa 113  Q
    |||||||| |||||||||| || |||  ||||||| | |||  ||| ||||| ||||||||||||| ||||||||||| ||||||| ||||||| ||| |    
T  43141953 ggaaacaacttatgacatgcccataagttgttttcatttta--tttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaaca 43141856  T
Q  114 gtttgacttt 123  Q
     |||||||||    
T  43141855 atttgacttt 43141846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 3235412 - 3235522
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtca-atgttatagaaataacttattc 154  Q
    |||| ||||| || |||| |||||| |||||||||||||||||| ||||||| ||| ||||||||||| |||| |||  ||||||| ||||| || || |    
T  3235412 atttccataaacttttcaagatagtatatgaaaacagcttatagtttatatg-aaacagtttgactttatttt-tcatttgttataaaaatagctaatac 3235509  T
Q  155 ataagcacttata 167  Q
    |||||||||||||    
T  3235510 ataagcacttata 3235522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 17952745 - 17952841
Alignment:
Q  72 caggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagcacttata 167  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||||| |||| ||   ||||||||||||| |||||  |||||| ||||||    
T  17952745 caggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttata 17952841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 43205393 - 43205284
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||  ||| ||||||||| |||||||||||  ||||  ||| |||||||||| |  ||||| |||||||||||| |||||  |||||||||||    
T  43205393 atggaaacaacatataacatgtccgcaaactgttttcaactta--tttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaa 43205296  T
Q  112 aagtttgacttt 123  Q
     |||||| ||||    
T  43205295 cagtttggcttt 43205284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 9395172 - 9395117
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||||||||| ||| |||  | |||||||||||||||||||||||||||||    
T  9395172 attttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaa 9395117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 15377807 - 15377752
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||| |||| |||| ||||||||||||||||||  |||||||||||    
T  15377807 attttcataagctcctcagaatagcttatgaaaacagcttataacttatatgaaaa 15377752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 39983384 - 39983329
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||| |||||| |||||||| ||||||||||| ||||||| |||||||||||    
T  39983384 attttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 39983329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 41817210 - 41817099
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattc 154  Q
    |||| |||||||||| |||||||||||||||||| |||||| | ||||||  |||| ||||||  |||  ||| ||   ||||||||||||| |||||||    
T  41817210 atttccataagctctccaggatagtttatgaaaatagcttacacattatacaaaaatagtttgcttttaatttctcttgtgttatagaaatagcttattc 41817111  T
Q  155 ataagcacttat 166  Q
    ||||||| ||||    
T  41817110 ataagcatttat 41817099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 1939323 - 1939457
Alignment:
Q  17 aacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagat-tatatgaaaaaagt 115  Q
    ||||| ||||||||||||| ||| ||||||||  ||||  ||| |||||||||| ||| |||| |||||||||||| |||||| |  ||||||||| |||    
T  1939323 aacaacttatgacatgtccataagctgttttcaactta--tttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagt 1939419  T
Q  116 ttgactttcttttgtc-aatgttatagaaataacttat 152  Q
    || ||||| |||| ||   |||||||||||||||||||    
T  1939420 ttcactttattttatcttttgttatagaaataacttat 1939457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 4026859 - 4026817
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  4026859 attttcataagttcttcaggataatttatgaaaacagcttata 4026817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 13736321 - 13736387
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||||||||||  || |||| ||||||||||||||||||| | || |||||| ||||||||||    
T  13736321 attttcataagctctctagtatagcttatgaaaacagcttatagctgatgtgaaaatagtttgactt 13736387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 44644320 - 44644278
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  44644320 attttcataagctcttcaagatagtttttgaaaacagcttata 44644278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 6561397 - 6561340
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttga 119  Q
    ||||||||| |||||||| || |||||||  ||||||| |||||||||||||||||||    
T  6561397 ataagctctccaggatagcttctgaaaacttcttataggttatatgaaaaaagtttga 6561340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 9478379 - 9478229
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagt 115  Q
    |||||| |||| |||||||| ||| |||||||| |||||   || ||| | |||| || ||||| ||| ||| ||||| ||||| ||||||||||| | |    
T  9478379 aaacaacttattacatgtccataagctgttttcatcttac--ttccatcaactctccacgatagcttacgaacacagcatatagcttatatgaaaatatt 9478282  T
Q  116 ttgactttcttttgtcaa-tgttatagaaataacttattcataagcacttata 167  Q
    |||| ||| |||| || | ||||||||||||| ||||| ||||| ||||||||    
T  9478281 ttgagtttattttatctactgttatagaaatagcttatacataaacacttata 9478229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 10884549 - 10884594
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagat 101  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||    
T  10884549 attttcataagctctctaggatagcttatgaaaacagcttatagat 10884594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 15780113 - 15780064
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||||||||    
T  15780113 ataagctctgcacgatagcttatgaaaacaacttatagattatatgaaaa 15780064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 36415701 - 36415790
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaa-tgttatagaaa 144  Q
    |||||| |||| ||| || ||||| |||||||||||||||||||  |  |||||||| |||||||||| |||| |||| |||||||||||    
T  36415701 attttcgtaagttctacatgatagcttatgaaaacagcttatagcatcaatgaaaaatgtttgactttattttatcaattgttatagaaa 36415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 39621968 - 39621890
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt-gtcaatgttatagaaataacttattcataagc 160  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||||  |   ||||||||||||| |||||||||||||    
T  39621968 ttatgaaaacagcttatagattata--caaaaagtttgactttattttattttgtgttatagaaatatcttattcataagc 39621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 11344340 - 11344424
Alignment:
Q  84 tgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattcataagcacttata 167  Q
    ||||||||  |||||| || |||||||| | |||||||||||||| ||  | |||||||||||| ||||| ||||||||||||||    
T  11344340 tgaaaacaatttatagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttata 11344424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 13630313 - 13630421
Alignment:
Q  60 tcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataa 158  Q
    |||||| ||||  ||||||| ||| ||||||| ||||| ||||||||||||| ||||||||||| | || ||   || || ||||||||||||| |||||    
T  13630313 tcataaactctcaaggatagattaggaaaacaacttattgattatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataa 13630412  T
Q  159 gcacttata 167  Q
    |||| ||||    
T  13630413 gcacctata 13630421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 13866917 - 13866865
Alignment:
Q  70 ttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||||| | ||||||| |||||||||||||||| |||| ||||||||||    
T  13866917 ttcaggatagctaatgaaaagagcttatagattatataaaaacagtttgactt 13866865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 22681213 - 22681285
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||||| |||  ||||||| ||||||||||||||||||| ||||||||||| | |||| |||| ||||    
T  22681213 atttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttt 22681285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 1742018 - 1742126
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||| ||||||||||| | ||| || | |||  ||||  ||| ||||| ||||||| ||||| ||||||||||||||||||  ||||||  |||    
T  1742018 atggaaacaacttatgacatgtgcataagctatcttcaactta--tttccataaactcttcatgatagattatgaaaacagcttatatcttatatataaa 1742115  T
Q  112 aagtttgactt 122  Q
     ||||||||||    
T  1742116 gagtttgactt 1742126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 3102710 - 3102663
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||||||| ||||||||||| |||| ||||||||||| ||||    
T  3102710 ttatgaaaacagctaatagattatataaaaatagtttgactttatttt 3102663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 16353903 - 16353837
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||| ||| ||| || ||||| |||| |||||||||||||| |||||||| ||||||||||||||    
T  16353903 attttcacaagatctccaagatagcttataaaaacagcttatagcttatatga-aaaagtttgacttt 16353837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 18066170 - 18066115
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||| |||| ||| || ||||| ||||||||||||||||||| |||||||||||    
T  18066170 attttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaa 18066115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 18179268 - 18179323
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||| |||| ||| |||||||| |||||||| |||||||||| |||||||||||    
T  18179268 attttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaa 18179323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 25800859 - 25800816
Alignment:
Q  68 tcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||    
T  25800859 tcttcaagatagcttatgaaaacagcttatagcttatatgaaaa 25800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 33942228 - 33942120
Alignment:
Q  18 acaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagttt 117  Q
    |||| ||||||||||| | ||| ||||||||  ||  ||||||||| ||||||  | ||| | ||||||||||| ||||||| ||| ||||||| |||||    
T  33942228 acaacttatgacatgttcataagctgttttcagct--aattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagttt 33942131  T
Q  118 gactttctttt 128  Q
    |||||| ||||    
T  33942130 gactttatttt 33942120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 35486391 - 35486458
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||| ||||| |||| |||||||| ||  |||||||||||||||||||||  |||| |||||||||||    
T  35486391 atttccataacctctccaggatagcttgcgaaaacagcttatagattatacaaaaacagtttgacttt 35486458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 43985031 - 43985086
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||  ||||| |||||    
T  43985031 attttcataagctcttcaagatagcttatgaaaacaacttataatttatacgaaaa 43985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 3050016 - 3049974
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    ||||||||||||||| || ||||| ||||||||||||||||||    
T  3050016 attttcataagctctccatgatagcttatgaaaacagcttata 3049974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 5043590 - 5043660
Alignment:
Q  58 tttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| |||| | || ||||| ||||||||||| ||| ||| ||||||||||| ||||||||||| ||||    
T  5043590 tttcattagctatccatgatagcttatgaaaacaacttctagcttatatgaaaacagtttgactttatttt 5043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 25790168 - 25790102
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||||| |||||||| ||||  |||||  || ||| ||||||||||| ||||||||||    
T  25790168 attttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagtttgactt 25790102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 11513921 - 11513868
Alignment:
Q  75 gatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||| ||||||||||| ||||||| ||||||||||| | ||||||||| ||||    
T  11513921 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttt 11513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 42420039 - 42419990
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    |||| |||||||| | |||||||| ||||||||| |||||||||||||||    
T  42420039 atttccataagctatccaggatagcttatgaaaatagcttatagattata 42419990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 42817409 - 42817470
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||||||||| |||| |||||||||||| ||||   ||||||||||| || |||||||    
T  42817409 cataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgactt 42817470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 8017476 - 8017404
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||| ||| || ||||| |||||||||||| ||| || ||||||||||| | ||| ||||| ||||    
T  8017476 attttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaactttgtttt 8017404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 9556281 - 9556209
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||| |  ||||||| |||||||||||| |||||| || |||||||| |  |||||||| ||||    
T  9556281 attttcataagctttctaggatagcttatgaaaacagtttatagcttgtatgaaaacacgttgactttatttt 9556209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 11344756 - 11344792
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttc 48  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  11344756 atggaaacaacttatgacatgtccataaactgttttc 11344792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 13869123 - 13869195
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||| || ||| |||||||  ||||||||||||||||||| ||| ||||||| | ||||| | ||||||    
T  13869123 attttcattagttctccaggataacttatgaaaacagcttatagcttagatgaaaataatttgaatgtctttt 13869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 26626915 - 26626847
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttc 124  Q
    ||||||||||| ||| || ||||| ||||||||||||||| ||| ||||| ||||| | ||| ||||||    
T  26626915 attttcataagttctgcaagatagcttatgaaaacagcttctagcttatacgaaaacaatttaactttc 26626847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 30552672 - 30552732
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtt 116  Q
    |||| ||||||||||  ||||||||||||||||| |  |||||| | ||||||||||||||    
T  30552672 atttccataagctctctaggatagtttatgaaaataatttatagctgatatgaaaaaagtt 30552732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 34054936 - 34055040
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagca 161  Q
    ||||||||  ||||||| ||||||||||| ||||||   |||||| ||| |||||| |||| |||| ||   ||||||||||||| | ||| ||||||||    
T  34054936 taagctctataggatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatcttttgttatagaaatagcctatacataagca 34055035  T
Q  162 cttat 166  Q
    |||||    
T  34055036 cttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 35485959 - 35485887
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||| |||||||||||||| |||| |||||| ||||||| |||||   ||| ||||||||||| ||||    
T  35485959 atttccataggctcttcaggatagcttataaaaacaacttatagcttataatgaaatagtttgactttatttt 35485887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 36863653 - 36863725
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||||||||||||| || ||||| |||||||||||  |||||  |||||| ||||  |||||||||| ||||    
T  36863653 attttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttatttt 36863725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 37276778 - 37276722
Alignment:
Q  66 gctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||| |||||||  ||||||||||| ||||||  ||||||||||| ||||||||||    
T  37276778 gctctccaggataacttatgaaaacaacttataacttatatgaaaacagtttgactt 37276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 37292379 - 37292447
Alignment:
Q  60 tcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| |||| |||||||| ||| ||||||| || |||| ||||||||||| ||||| ||||| ||||    
T  37292379 tcataaactctccaggatagcttaagaaaacaactaatagcttatatgaaaatagttttactttatttt 37292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 21157810 - 21157743
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||| |||||||||||||||||||  |||||||||| ||||||| ||| ||||||| |||||||||||    
T  21157810 atttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgacttt 21157743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 23819162 - 23819023
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||| |||  ||||||| |||||  |||  |||||||||||| ||||| |||||||||||  |||||  ||||||||||| |||||||||     
T  23819162 ttatgacatgtccataagttgttttcatctta--tttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagtttgacta 23819065  T
Q  123 tcttttgtcaatgttatagaaataacttattcataagcactt 164  Q
      |||| |   |||||| |||||||||||| ||||| |||||    
T  23819064 cattttatatttgttatggaaataacttatacataaacactt 23819023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 49219181 - 49219084
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgt-caatgttatagaaataacttat 152  Q
    |||| ||||| ||||| | ||||||||||||||||| ||||||| ||||||||||| | ||||||||| |||| |    |||||||||||||||||||    
T  49219181 atttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttat 49219084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 2996653 - 2996508
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagt 115  Q
    |||||| ||||||||||||| ||| || |||||  ||||  |||||||| ||||| || ||||| ||||||||||| ||||||  |||||| |||| | |    
T  2996653 aaacaacttatgacatgtccataagcttttttcaactta--ttttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaat 2996556  T
Q  116 ttgactttcttttgtc-aatgttatagaaataacttattcataagcac 162  Q
    |||||| | |||| ||  ||||||| ||| || |||||||||||||||    
T  2996555 ttgactgtattttatcttatgttatcgaagtagcttattcataagcac 2996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 44319992 - 44319880
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattc 154  Q
    |||||||||||| |||  ||||||| |||| |||| ||||| ||| ||||||||||| |||| |||||| |||| ||  | |||||||||||  |||| |    
T  44319992 aattttcataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttattttatcttttttatagaaatagtttatac 44319893  T
Q  155 ataagcacttata 167  Q
    || ||||||||||    
T  44319892 atgagcacttata 44319880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 17883546 - 17883584
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttga 119  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  17883546 ttatgaaaacagcttatagattatacgaaaaaagtttga 17883584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 47800665 - 47800623
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47800665 attttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 56480390 - 56480348
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  56480390 attttcataagctctccaagatagtttatgaaaacagcttata 56480348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 35958691 - 35958594
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataa 158  Q
    |||| |||| |||||||| ||||||||||||||| ||| |||||| ||| || ||||||||| ||||  |  |||||||||||||| ||||| |||||    
T  35958691 ataaactctccaggatagcttatgaaaacagcttctagcttatataaaacaaatttgactttattttaacttatgttatagaaatagcttatacataa 35958594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 12650311 - 12650355
Alignment:
Q  55 aattttcataagctcttcaggatagtttatgaaaacagcttatag 99  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||    
T  12650311 aatttccataagctctccaggataggttatgaaaacagcttatag 12650355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 30207569 - 30207710
Alignment:
Q  24 tatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||| |||| ||||||||  ||||  ||| ||||| ||||  | | ||| ||||||||||| ||||||| ||||||||||| ||||||| ||     
T  30207569 tatgacatgtctgtaagctgttttcagctta--tttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttgattta 30207666  T
Q  124 cttttgtcaatgttatagaaataacttattcataagcacttata 167  Q
     |||  |   |||||||||| |||| ||| ||||||||||||||    
T  30207667 ttttattttttgttatagaactaacatatacataagcacttata 30207710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 36722697 - 36722757
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtt 116  Q
    |||||||||||||||||||||||  |||| |||||| ||||||  ||||||||||| ||||    
T  36722697 attttcataagctcttcaggataacttatcaaaacaacttataacttatatgaaaacagtt 36722757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 1706664 - 1706621
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatag 99  Q
    ||||||||||||| | || |||||||||||||||||||||||||    
T  1706664 attttcataagctgtccaagatagtttatgaaaacagcttatag 1706621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 10365788 - 10365753
Alignment:
Q  82 tatgaaaacagcttatagattatatgaaaaaagttt 117  Q
    |||||||||||||||||| |||||||||||||||||    
T  10365788 tatgaaaacagcttatagtttatatgaaaaaagttt 10365753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 29778837 - 29778782
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||| | ||| ||||||||||| |||| || |||||||||||    
T  29778837 attttcataagctcttcaaggtagcttatgaaaacaacttacagcttatatgaaaa 29778782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 35507355 - 35507402
Alignment:
Q  58 tttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    |||||||||||||| |||||||| |||||||||| ||||||| |||||    
T  35507355 tttcataagctctttaggatagtgtatgaaaacaacttatagcttata 35507402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 35507487 - 35507534
Alignment:
Q  58 tttcataagctcttcaggatagtttatgaaaacagcttatagattata 105  Q
    |||||||||||||| |||||||| |||||||||| ||||||| |||||    
T  35507487 tttcataagctctttaggatagtgtatgaaaacaacttatagcttata 35507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 53315368 - 53315305
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttga 119  Q
    |||||||||||||||  ||| | |||| ||| |||||||||||| ||||||||||| |||||||    
T  53315368 attttcataagctctctaggtttgtttttgagaacagcttatagcttatatgaaaatagtttga 53315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 54325070 - 54325137
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||| |||| || ||||| || |||||| ||||||||| ||||||||||| ||||||||||| ||||    
T  54325070 cataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgactttatttt 54325137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 7694038 - 7694104
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||| ||||| |||| |||||||  ||||||||||||||||||| |||||  |||| ||||||||||    
T  7694038 atttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgactt 7694104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 25309283 - 25309233
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatat 106  Q
    ||||||||||||||| |||||||||||| |||||||| || ||| ||||||    
T  25309283 attttcataagctctgcaggatagtttacgaaaacagtttgtagtttatat 25309233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 166
Target Start/End: Original strand, 42321936 - 42322018
Alignment:
Q  85 gaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaat-gttatagaaataacttattcataagcacttat 166  Q
    ||||||| ||||||  ||||||||||| | ||||||||| |||| ||| | |||||| ||||| ||||||||||| |||||||    
T  42321936 gaaaacaacttataatttatatgaaaacaatttgactttattttatcatttgttataaaaatagcttattcataaacacttat 42322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 42866105 - 42866047
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttga 119  Q
    ||||||||||  ||||||| ||||||||||| ||||||| |||||| |||| |||||||    
T  42866105 cataagctctcaaggatagcttatgaaaacaacttatagcttatataaaaacagtttga 42866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 3155664 - 3155606
Alignment:
Q  35 cgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagctt 95  Q
    ||||||||||||||  ||||  ||||||| || |||||| |||||||||||||||||||||    
T  3155664 cgtaaactgttttcagctta--ttttcattagttcttcaagatagtttatgaaaacagctt 3155606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 3891611 - 3891507
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattcataagca 161  Q
    |||||||||  ||||||| |||| |||||| |||| | ||||||  ||||  ||| |||||| |||| ||  |||||||||||||  |||||||||||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttattttatcc-tgttatagaaatagtttattcataagca 3891513  T
Q  162 cttata 167  Q
    ||||||    
T  3891512 cttata 3891507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 4663803 - 4663836
Alignment:
Q  134 tgttatagaaataacttattcataagcacttata 167  Q
    ||||||||||||||||||| ||||||||||||||    
T  4663803 tgttatagaaataacttatacataagcacttata 4663836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 24929577 - 24929463
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||  ||||| ||||| | |||| |||||||  ||||  ||| ||||||||||  || | |||||||||||||| ||||||| || ||||||||    
T  24929577 atggaaacagcttatggcatgttcataaattgttttcagctta--tttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaa 24929480  T
Q  112 aagtttgactttctttt 128  Q
     |||| |||||| ||||    
T  24929479 cagttagactttatttt 24929463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 40008579 - 40008546
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaa 89  Q
    ||||| ||||||||||||||||||||||||||||    
T  40008579 atttttataagctcttcaggatagtttatgaaaa 40008546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 41097296 - 41097337
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||||||||| | ||||||||| ||||||||||    
T  41097296 ttatgaaaacagcttataggtaatatgaaaacagtttgactt 41097337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 1137754 - 1137706
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattat 104  Q
    |||| ||||||||||   ||||||||||||||| |||||||||||||||    
T  1137754 atttccataagctctcttggatagtttatgaaagcagcttatagattat 1137706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 3175985 - 3175921
Alignment:
Q  64 aagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||||||||| ||||||||||||||||||  |||  |||||| | ||||||||| ||||    
T  3175985 aagcccttcaggatagcttatgaaaacagcttataacttacttgaaaacaatttgactttatttt 3175921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 11264374 - 11264301
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttata 98  Q
    ||||||||||||| ||||||||||||  |||  |||| ||||||||||  ||||| | ||||||||||| ||||||    
T  11264374 ttatgacatgtccataaactgttttcaactt--atttccataagctctctaggatggcttatgaaaacaacttata 11264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 16200009 - 16200081
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||||  || || ||||| |||||||||||||||||||  ||||  |||| ||||||| ||||||||    
T  16200009 attttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaacagtttgattttctttt 16200081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 21043263 - 21043299
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacag 92  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  21043263 attttcatatgctcttcaggatagcttatgaaaacag 21043299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 6509337 - 6509426
Alignment:
Q  62 ataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttat 152  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||| || | | ||||||||| |||| ||  ||||||||| |||||||||    
T  6509337 ataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatc-ttgttatagatataacttat 6509426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 10075579 - 10075646
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||  |||||| |||| |||||||||||    
T  10075579 attttcataagctctctaggatagcttatgaaaatagcttataacttatataaaaatagtttgacttt 10075646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 39389204 - 39389271
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    ||||||||||||||||| ||||| |||||| ||| |||| ||||  ||||||||| ||||||||||||    
T  39389204 attttcataagctcttctggataatttatggaaatagctgatagcctatatgaaagaagtttgacttt 39389271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 4763955 - 4763849
Alignment:
Q  61 cataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataag 159  Q
    ||||||||||||||||||| |||  |||||||||||||| |||| ||||||  |||||| ||| |||| ||   |||| | |||||||||||| |||||     
T  4763955 cataagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatcttttgttgtcgaaataacttatgcataaa 4763856  T
Q  160 cacttat 166  Q
    |||||||    
T  4763855 cacttat 4763849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 30013244 - 30013194
Alignment:
Q  72 caggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  30013244 caggatagcttatgaaaacagcttatagcttatatggaaacagtttgactt 30013194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 34522082 - 34522195
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaa--agtttgactttcttttgtc-aatgttatagaaataacttat 152  Q
    |||||||||||||||| ||||||| || |||||| | ||| |||||||||  |||||  ||||||||||| |||| ||   ||| ||||||||| |||||    
T  34522082 attttcataagctctttaggatagcttttgaaaataccttttagattatactaaaaagtagtttgactttattttatcttgtgtcatagaaatagcttat 34522181  T
Q  153 tcataagcacttat 166  Q
    |||||||| |||||    
T  34522182 tcataagcgcttat 34522195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 41620277 - 41620428
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||| ||||||||||||| |||  |||||||  |||  ||||||| ||||||  || ||||| |||| |||||||||| |||| |||||||| |    
T  41620277 atggaaacaaattatgacatgtccataagttgttttccgctt--attttcaaaagctcgacaagatagcttataaaaacagcttttagaatatatgaaca 41620374  T
Q  112 aagtttgactttcttttgtc-aatgttatagaaataacttattcataagcactt 164  Q
     | ||||||||| |||| ||   ||||| | |||||||||||  ||||||||||    
T  41620375 taatttgactttattttatcttttgttacaaaaataacttatatataagcactt 41620428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 11795165 - 11795067
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||| ||| ||||||||  ||||  ||| |||||||||| ||  |||| |||||||| |||||||||  ||||||||||| ||| ||||||    
T  11795165 ttatgacatgtccataacctgttttcagctta--tttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgactt 11795068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 1470884 - 1470956
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||| ||| || |||| ||||| ||||||||||||||||||| ||||||||||  | ||||||||| ||||    
T  1470884 attttcctaaacttttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttatttt 1470956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 12361265 - 12361168
Alignment:
Q  23 ttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||| ||| ||||||||  ||||  ||| ||| |||||| | | |||  ||||||||||||||||||| ||||||||||| | ||||||||    
T  12361265 ttatgacatgtccataagctgttttcaactta--tttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgactt 12361168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 25097427 - 25097387
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttat 97  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  25097427 ttttcataagctctccaggatagcttatgaaaacagcttat 25097387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 29973123 - 29973051
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||| ||||  ||||||| ||||||||||| ||||||| |||| |||||| ||||||||||| ||||    
T  29973123 atttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttatttt 29973051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 42215334 - 42215406
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||||||||| ||||||||  |||||||| || ||||||||||||  |||| ||||||||||| ||||    
T  42215334 atttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagtttgactttatttt 42215406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 43704365 - 43704473
Alignment:
Q  15 gaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtt--tatgaaaacagcttatagattatatgaaaaa 112  Q
    ||||||| ||||||||||| | |||||||||||   ||||  ||| |||||||| || ||||||  |  |||||||||| ||||||| |||||||||||     
T  43704365 gaaacaacttatgacatgttcataaactgttttaagctta--tttccataagcttttgaggataactcttatgaaaacaacttatagtttatatgaaaac 43704462  T
Q  113 agtttgacttt 123  Q
    |||||||||||    
T  43704463 agtttgacttt 43704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 5227577 - 5227522
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||| ||||| |||  |||||||||||||| |||||| ||||    
T  5227577 attttcataagctcttcatgatagcttacaaaaacagcttatagcttatattaaaa 5227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 9836882 - 9836949
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||| |||||||||| || ||||| |||||||||||| || ||  ||||||||||| |||||||||||    
T  9836882 atttccataagctctccaagatagcttatgaaaacaggttgtaacttatatgaaaatagtttgacttt 9836949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 27028873 - 27028830
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatag 99  Q
    ||||||||||||||| || ||||| |||||||||||||||||||    
T  27028873 attttcataagctctccaagatagcttatgaaaacagcttatag 27028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 31862535 - 31862468
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgacttt 123  Q
    |||||||||||||||  ||||||  ||||||||||| ||||||| ||||| || || |||||||||||    
T  31862535 attttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgacttt 31862468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 31875581 - 31875669
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagatt 102  Q
    |||||||||| ||||||||||||| ||| |  |||||  ||||  ||||||||||||||| | |||||||||   ||||||||||||||||    
T  31875581 atggaaacaacttatgacatgtccataagccattttcaactta--ttttcataagctcttgaagatagtttaaagaaacagcttatagatt 31875669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 105
Target Start/End: Complemental strand, 38537619 - 38537584
Alignment:
Q  70 ttcaggatagtttatgaaaacagcttatagattata 105  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38537619 ttcaggatagtttatgaaagcagcttatagattata 38537584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 41309827 - 41309772
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||| || |||||||||| ||||||||| | ||||||| |||||||||||    
T  41309827 attttcataaacttttcaggatagcttatgaaaatatcttatagtttatatgaaaa 41309772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 4558840 - 4558730
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattc 154  Q
    |||| ||||||||||  ||||||| ||||| |||||||||||||  |||||||||| | ||| ||||| |||| ||   | ||||||||||| ||||| |    
T  4558840 atttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatac 4558741  T
Q  155 ataagcactta 165  Q
    |||| ||||||    
T  4558740 ataaacactta 4558730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 28769387 - 28769433
Alignment:
Q  76 atagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    |||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  28769387 atagcttatgaaaacagcttatagcttataagaaaatagtttgactt 28769433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 39551195 - 39551290
Alignment:
Q  12 atggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaa 109  Q
    |||||||||| |||||||||||||  || |||||||   ||||  |||| ||||||||| ||||| || ||||||||||| ||||||| || ||||||    
T  39551195 atggaaacaacttatgacatgtccaaaagctgtttttaactta--tttttataagctctccaggaaagcttatgaaaacaacttatagcttgtatgaa 39551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 42764302 - 42764248
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagttt 117  Q
    ||||||||||||||||  ||||||||| ||||||||| || |||||||| |||||    
T  42764302 taagctcttcaggataacttatgaaaatagcttatagcttgtatgaaaacagttt 42764248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 1433590 - 1433525
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgact 121  Q
    ||||||||||||||| |||||||| |||||||||| ||||| || ||| || |||| |||| ||||    
T  1433590 attttcataagctctccaggatagcttatgaaaactgcttaaagcttaaataaaaatagttcgact 1433525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 4390248 - 4390143
Alignment:
Q  63 taagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttattcataagca 161  Q
    |||||||||| ||| || ||||||||| ||||||||||||||   |||| ||||||||| | |||||||   ||| || |||||||||||| | |||||     
T  4390248 taagctcttctggagagcttatgaaaatagcttatagattatgcaaaaacagtttgactgtgttttgtcttctgtgattgaaataacttatccgtaagcg 4390149  T
Q  162 cttata 167  Q
    ||||||    
T  4390148 cttata 4390143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 9562291 - 9562344
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaa 109  Q
    |||||||| |||| |||||||||||||||||||| | ||||||| | |||||||    
T  9562291 attttcatgagcttttcaggatagtttatgaaaatatcttatagttgatatgaa 9562344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 11183625 - 11183515
Alignment:
Q  16 aaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagt 115  Q
    |||||| |||||| |||||  ||| ||||||||  ||||  ||| |||||||||| |||| ||| || |||||||||||||||| | ||||||  | |||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagctta--tttccataagctctccagggtagcttgtgaaaacagcttatagctaatatgaggacagt 11183528  T
Q  116 ttgactttctttt 128  Q
    |||||||| ||||    
T  11183527 ttgactttgtttt 11183515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 40014919 - 40014960
Alignment:
Q  58 tttcataagctcttcaggatagtttatgaaaacagcttatag 99  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  40014919 tttcataagctcttcaagatagcttatgaaaacatcttatag 40014960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 42476068 - 42476035
Alignment:
Q  134 tgttatagaaataacttattcataagcacttata 167  Q
    ||||| ||||||||||||||||||||||||||||    
T  42476068 tgttacagaaataacttattcataagcacttata 42476035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 1470061 - 1470029
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaa 88  Q
    |||||||||||||||||||||||| ||||||||    
T  1470061 attttcataagctcttcaggatagattatgaaa 1470029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 8062566 - 8062494
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||||||||| ||||  | ||||| |||||| |||| ||||||| ||||||||||| | ||||||||| ||||    
T  8062566 attttcataaactctctaagatagcttatgagaacatcttatagcttatatgaaaacaatttgactttttttt 8062494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 10383927 - 10383855
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| ||||||||||  | ||||||||| ||||||||| ||||||||||| ||||| || |||| ||| ||||    
T  10383927 atttccataagctctatatgatagtttacgaaaacagcatatagattatacgaaaacagcttgattttatttt 10383855  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 26717278 - 26717187
Alignment:
Q  75 gatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtcaatgttatagaaataacttattcataagcacttata 167  Q
    ||||| ||||||||||||| | | | |||| |||||| ||||||||||| |||| ||  ||||||| || || |||||||| |||||||||||    
T  26717278 gatagattatgaaaacagccttttgcttatttgaaaatagtttgactttattttatc-ttgttataaaattagcttattcagaagcacttata 26717187  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 26820216 - 26820144
Alignment:
Q  81 ttatgaaaacagcttatagattatatgaaaaaagtttgactttcttttgtc-aatgttatagaaataacttat 152  Q
    |||||||||| |||||||| |||||  |||| ||||||||||| |||| ||   |||||||||||||||||||    
T  26820216 ttatgaaaacggcttatagtttataacaaaatagtttgactttattttatcttttgttatagaaataacttat 26820144  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 30043784 - 30043828
Alignment:
Q  66 gctcttcaggatagtttatgaaaacagcttatagattatatgaaa 110  Q
    ||||||||| |||| |||||||||||||||||||  |||||||||    
T  30043784 gctcttcagtatagcttatgaaaacagcttatagcatatatgaaa 30043828  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 32143087 - 32143139
Alignment:
Q  70 ttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactt 122  Q
    ||||||||||||||||||||| |||||||  || ||| |||| ||||||||||    
T  32143087 ttcaggatagtttatgaaaaccgcttataacttgtataaaaacagtttgactt 32143139  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 33209248 - 33209320
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    ||||| ||||||||| | | |||| |||| |||| ||||||||| ||||||||||| |||| |||||| ||||    
T  33209248 atttttataagctctccggaatagcttataaaaatagcttatagtttatatgaaaacagttcgactttatttt 33209320  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 12111 - 12060
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatg 107  Q
    ||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||    
T  12111 attttcaaaagctcttcagaatagtttatgaaaacaatttatagaatatatg 12060  T

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Target: scaffold0091 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 6994 - 6939
Alignment:
Q  56 attttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaa 111  Q
    |||||||||||||||||| ||||| |||  |||||||||||||| |||||| ||||    
T  6994 attttcataagctcttcatgatagcttacaaaaacagcttatagcttatattaaaa 6939  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 159957 - 160053
Alignment:
Q  10 taatggaaacaatttatgacatgtccgtaaactgttttcttcttaaattttcataagctcttcaggatagtttatgaaaacagcttatagattatatga 108  Q
    ||||||||||| |||||||||||||  ||| | ||||||  ||||  ||| || |||||||| ||||||| ||||||||||| ||||||  ||||||||    
T  159957 taatggaaacagtttatgacatgtctataagcagttttcagctta--tttccacaagctctttaggatagcttatgaaaacatcttataacttatatga 160053  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 40276 - 40230
Alignment:
Q  53 taaattttcataagctcttcaggatagtttatgaaaacagcttatag 99  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||    
T  40276 taaactttcataagctcttcaggataacttatgaaaacaacttatag 40230  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 2641 - 2710
Alignment:
Q  57 ttttcataagctcttcaggatagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctt 126  Q
    |||||||||||||| |||||||||||||||| ||| || |||  ||| | ||||| |||||||| |||||    
T  2641 ttttcataagctctccaggatagtttatgaagacatctcataacttacacgaaaacagtttgacattctt 2710  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 4271 - 4323
Alignment:
Q  76 atagtttatgaaaacagcttatagattatatgaaaaaagtttgactttctttt 128  Q
    |||| |||| |||||||||||||| |||||||||||  |||||||||| ||||    
T  4271 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 4323  T

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