View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1274_high_81 (Length: 251)

Name: NF1274_high_81
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1274_high_81
NF1274_high_81
[»] chr7 (77 HSPs)
chr7 (117-237)||(35214844-35214964)
chr7 (119-230)||(34951266-34951377)
chr7 (97-228)||(5805055-5805186)
chr7 (131-231)||(10619851-10619951)
chr7 (119-231)||(19925311-19925423)
chr7 (131-243)||(23679492-23679603)
chr7 (97-229)||(33235051-33235183)
chr7 (98-237)||(20366066-20366204)
chr7 (97-215)||(21412883-21413001)
chr7 (119-230)||(33235526-33235637)
chr7 (131-233)||(4187661-4187763)
chr7 (108-226)||(31175935-31176053)
chr7 (117-237)||(5559145-5559266)
chr7 (97-230)||(31893267-31893391)
chr7 (118-221)||(1286408-1286511)
chr7 (147-230)||(28256560-28256643)
chr7 (97-215)||(36566295-36566413)
chr7 (97-215)||(33879505-33879623)
chr7 (118-231)||(20101860-20101972)
chr7 (123-231)||(21413083-21413190)
chr7 (97-200)||(4187523-4187626)
chr7 (97-212)||(40904708-40904823)
chr7 (97-228)||(1346497-1346624)
chr7 (119-217)||(5805581-5805679)
chr7 (97-231)||(23150656-23150790)
chr7 (97-183)||(31893497-31893583)
chr7 (97-231)||(39959167-39959301)
chr7 (119-237)||(42990539-42990657)
chr7 (97-230)||(27995078-27995211)
chr7 (130-229)||(6220351-6220449)
chr7 (119-230)||(1441416-1441518)
chr7 (119-229)||(35215299-35215409)
chr7 (118-183)||(22876875-22876940)
chr7 (119-215)||(21433183-21433279)
chr7 (97-200)||(21433278-21433382)
chr7 (148-236)||(27995548-27995636)
chr7 (143-215)||(31893253-31893325)
chr7 (147-215)||(31893525-31893593)
chr7 (147-215)||(36566285-36566353)
chr7 (130-237)||(5559595-5559692)
chr7 (119-230)||(20183809-20183919)
chr7 (108-237)||(1349116-1349248)
chr7 (119-221)||(20366521-20366623)
chr7 (119-164)||(8039702-8039747)
chr7 (122-215)||(19925147-19925239)
chr7 (118-191)||(28256950-28257023)
chr7 (118-183)||(41020145-41020210)
chr7 (147-215)||(5805045-5805113)
chr7 (147-215)||(8039670-8039738)
chr7 (189-237)||(8039755-8039803)
chr7 (147-215)||(21412873-21412941)
chr7 (147-215)||(28256986-28257054)
chr7 (97-165)||(34951501-34951569)
chr7 (191-231)||(42990991-42991031)
chr7 (100-155)||(1286450-1286505)
chr7 (148-211)||(33235042-33235105)
chr7 (194-237)||(39958792-39958835)
chr7 (194-240)||(36566486-36566532)
chr7 (147-212)||(27995068-27995133)
chr7 (147-215)||(35214813-35214882)
chr7 (119-200)||(36566377-36566458)
chr7 (97-166)||(39958704-39958773)
chr7 (147-183)||(1346487-1346523)
chr7 (154-237)||(1286772-1286854)
chr7 (194-237)||(8040123-8040166)
chr7 (131-202)||(21433337-21433408)
chr7 (147-230)||(28104304-28104387)
chr7 (117-176)||(33879348-33879407)
chr7 (145-199)||(5075353-5075407)
chr7 (97-155)||(28256570-28256628)
chr7 (147-212)||(23150646-23150711)
chr7 (131-192)||(31893437-31893498)
chr7 (147-212)||(33879568-33879633)
chr7 (147-215)||(1286377-1286445)
chr7 (147-215)||(5559667-5559734)
chr7 (147-215)||(28256500-28256568)
chr7 (147-203)||(39959255-39959311)
[»] chr5 (42 HSPs)
chr5 (119-237)||(20728567-20728685)
chr5 (97-237)||(36418367-36418507)
chr5 (118-231)||(6336300-6336413)
chr5 (100-229)||(18248978-18249107)
chr5 (108-215)||(32660227-32660334)
chr5 (147-237)||(20729011-20729101)
chr5 (97-230)||(19278722-19278854)
chr5 (101-237)||(5734948-5735083)
chr5 (119-237)||(5734502-5734619)
chr5 (97-237)||(30737757-30737897)
chr5 (98-230)||(36417904-36418027)
chr5 (122-192)||(18321225-18321295)
chr5 (97-215)||(18951320-18951438)
chr5 (118-243)||(30738218-30738344)
chr5 (97-231)||(13543101-13543238)
chr5 (147-230)||(18237919-18238002)
chr5 (147-230)||(32459829-32459912)
chr5 (102-200)||(32660281-32660379)
chr5 (119-228)||(1722539-1722648)
chr5 (147-243)||(13543563-13543659)
chr5 (147-230)||(32459434-32459517)
chr5 (147-229)||(35891236-35891318)
chr5 (147-215)||(26275511-26275579)
chr5 (119-237)||(35190389-35190497)
chr5 (98-167)||(38405572-38405641)
chr5 (147-215)||(13543091-13543159)
chr5 (147-230)||(1722949-1723032)
chr5 (97-237)||(13538486-13538621)
chr5 (130-181)||(14235618-14235669)
chr5 (119-193)||(35189952-35190026)
chr5 (147-192)||(19278712-19278757)
chr5 (147-200)||(19279235-19279288)
chr5 (100-152)||(13543594-13543646)
chr5 (152-236)||(18238306-18238390)
chr5 (147-215)||(18951310-18951378)
chr5 (147-215)||(35190461-35190529)
chr5 (148-215)||(36418449-36418516)
chr5 (191-230)||(38082658-38082697)
chr5 (119-200)||(6336182-6336263)
chr5 (147-215)||(6336150-6336218)
chr5 (147-215)||(13538476-13538544)
chr5 (147-215)||(14235575-14235643)
[»] chr8 (63 HSPs)
chr8 (97-237)||(23553371-23553511)
chr8 (119-227)||(36359939-36360047)
chr8 (97-243)||(9276955-9277100)
chr8 (97-231)||(9770768-9770902)
chr8 (97-237)||(30576636-30576776)
chr8 (119-237)||(44041264-44041382)
chr8 (117-230)||(9276519-9276632)
chr8 (97-237)||(39700901-39701041)
chr8 (97-215)||(39700841-39700959)
chr8 (97-237)||(8713862-8714002)
chr8 (119-243)||(8714324-8714448)
chr8 (119-230)||(25730106-25730218)
chr8 (97-230)||(30576168-30576301)
chr8 (120-236)||(16197068-16197184)
chr8 (119-230)||(25737592-25737704)
chr8 (119-231)||(45017785-45017897)
chr8 (97-227)||(14871342-14871464)
chr8 (119-229)||(25737142-25737252)
chr8 (97-230)||(23553851-23553984)
chr8 (147-236)||(34686875-34686964)
chr8 (97-230)||(39701376-39701509)
chr8 (100-231)||(4613759-4613890)
chr8 (97-231)||(29794240-29794374)
chr8 (97-237)||(31169461-31169600)
chr8 (97-176)||(9770577-9770656)
chr8 (148-231)||(13771425-13771508)
chr8 (147-230)||(35434313-35434396)
chr8 (147-228)||(5358649-5358730)
chr8 (97-230)||(40552778-40552911)
chr8 (119-215)||(43422896-43422992)
chr8 (119-215)||(43423091-43423186)
chr8 (148-215)||(16208748-16208815)
chr8 (108-174)||(40553278-40553344)
chr8 (131-200)||(9770662-9770731)
chr8 (146-215)||(41190329-41190398)
chr8 (148-243)||(6235796-6235892)
chr8 (148-240)||(13771840-13771932)
chr8 (147-215)||(39701451-39701519)
chr8 (148-229)||(16208674-16208755)
chr8 (119-200)||(45017934-45018013)
chr8 (147-243)||(35433903-35433999)
chr8 (119-237)||(6236214-6236323)
chr8 (97-183)||(11113567-11113653)
chr8 (117-163)||(36314697-36314743)
chr8 (154-203)||(14871012-14871061)
chr8 (130-215)||(40553297-40553382)
chr8 (147-215)||(11113557-11113625)
chr8 (147-215)||(25737110-25737178)
chr8 (119-183)||(43423063-43423127)
chr8 (148-215)||(31169543-31169609)
chr8 (179-230)||(34686509-34686560)
chr8 (117-200)||(36360088-36360171)
chr8 (179-230)||(44040860-44040911)
chr8 (119-173)||(29792558-29792612)
chr8 (119-156)||(29030175-29030212)
chr8 (119-196)||(41190288-41190365)
chr8 (147-199)||(8713852-8713904)
chr8 (147-215)||(9770844-9770912)
chr8 (145-212)||(25737670-25737738)
chr8 (147-215)||(30576718-30576786)
chr8 (147-215)||(36359907-36359975)
chr8 (119-183)||(43422956-43423020)
chr8 (147-215)||(44041346-44041414)
[»] chr2 (40 HSPs)
chr2 (97-229)||(27893536-27893668)
chr2 (119-231)||(31264132-31264244)
chr2 (97-213)||(30907090-30907206)
chr2 (119-237)||(36196471-36196589)
chr2 (109-205)||(31263953-31264049)
chr2 (119-231)||(34336073-34336185)
chr2 (97-236)||(19080645-19080784)
chr2 (97-243)||(27893051-27893188)
chr2 (120-237)||(11871718-11871835)
chr2 (97-205)||(32341409-32341518)
chr2 (119-202)||(30907316-30907400)
chr2 (135-231)||(15506040-15506136)
chr2 (147-231)||(15506478-15506562)
chr2 (97-204)||(16781049-16781157)
chr2 (119-231)||(41265227-41265330)
chr2 (97-183)||(31264001-31264087)
chr2 (97-215)||(34336263-34336381)
chr2 (147-237)||(42117174-42117264)
chr2 (98-203)||(8260402-8260507)
chr2 (147-212)||(34429687-34429752)
chr2 (122-231)||(39376215-39376314)
chr2 (97-157)||(19081055-19081115)
chr2 (97-165)||(37543119-37543187)
chr2 (120-212)||(39376399-39376491)
chr2 (194-231)||(20535556-20535593)
chr2 (146-215)||(30907079-30907148)
chr2 (131-183)||(5116895-5116947)
chr2 (97-165)||(34429697-34429765)
chr2 (143-215)||(37543129-37543201)
chr2 (147-215)||(39301873-39301941)
chr2 (148-231)||(5117052-5117134)
chr2 (119-231)||(20535936-20536039)
chr2 (117-176)||(32341490-32341549)
chr2 (135-238)||(39301371-39301473)
chr2 (117-183)||(37542983-37543049)
chr2 (148-230)||(39301807-39301880)
chr2 (194-231)||(21813250-21813287)
chr2 (143-196)||(32341395-32341448)
chr2 (148-215)||(16781098-16781166)
chr2 (147-215)||(27893041-27893109)
[»] scaffold0746 (2 HSPs)
scaffold0746 (119-230)||(509-620)
scaffold0746 (97-230)||(38-170)
[»] chr1 (34 HSPs)
chr1 (97-237)||(27351068-27351208)
chr1 (97-237)||(10686681-10686821)
chr1 (117-243)||(48352703-48352829)
chr1 (119-215)||(44964063-44964159)
chr1 (97-200)||(44964018-44964121)
chr1 (122-230)||(8902803-8902911)
chr1 (97-183)||(11897859-11897945)
chr1 (119-231)||(44963878-44963990)
chr1 (97-166)||(4030320-4030390)
chr1 (118-231)||(1765731-1765844)
chr1 (117-202)||(29419051-29419136)
chr1 (97-230)||(34254516-34254649)
chr1 (145-236)||(39302336-39302427)
chr1 (97-215)||(1765917-1766035)
chr1 (119-215)||(17898837-17898933)
chr1 (147-215)||(17898897-17898965)
chr1 (147-215)||(49650580-49650648)
chr1 (97-181)||(49650590-49650674)
chr1 (97-237)||(10685865-10685996)
chr1 (147-199)||(39302753-39302805)
chr1 (122-230)||(49650984-49651083)
chr1 (148-231)||(2965499-2965582)
chr1 (194-236)||(4030721-4030763)
chr1 (186-231)||(48352306-48352351)
chr1 (102-174)||(35701404-35701476)
chr1 (148-215)||(11897850-11897917)
chr1 (119-198)||(17898794-17898873)
chr1 (148-230)||(8903253-8903335)
chr1 (147-215)||(4030310-4030379)
chr1 (118-183)||(4772658-4772723)
chr1 (147-215)||(10685855-10685923)
chr1 (119-183)||(27351556-27351620)
chr1 (147-215)||(34254506-34254574)
chr1 (119-155)||(39302370-39302406)
[»] scaffold0070 (1 HSPs)
scaffold0070 (119-230)||(28583-28694)
[»] chr6 (31 HSPs)
chr6 (102-237)||(17180106-17180241)
chr6 (119-230)||(24139482-24139593)
chr6 (119-227)||(20575451-20575559)
chr6 (119-231)||(32417686-32417798)
chr6 (119-231)||(32423527-32423639)
chr6 (117-220)||(17179661-17179764)
chr6 (100-229)||(2839645-2839765)
chr6 (97-237)||(10862554-10862695)
chr6 (122-243)||(10962780-10962901)
chr6 (97-237)||(11527553-11527684)
chr6 (119-215)||(16168680-16168776)
chr6 (119-231)||(16168504-16168607)
chr6 (119-230)||(11528019-11528130)
chr6 (97-183)||(9902286-9902372)
chr6 (97-237)||(28630593-28630724)
chr6 (147-230)||(10407316-10407399)
chr6 (147-229)||(9901966-9902048)
chr6 (131-201)||(20575600-20575670)
chr6 (97-215)||(32417486-32417604)
chr6 (97-215)||(32423327-32423445)
chr6 (147-230)||(10407716-10407800)
chr6 (147-215)||(10862637-10862705)
chr6 (191-237)||(9946681-9946727)
chr6 (194-231)||(2840034-2840071)
chr6 (147-215)||(16168472-16168540)
chr6 (97-176)||(20575675-20575753)
chr6 (148-215)||(32417762-32417829)
chr6 (148-215)||(32423603-32423670)
chr6 (154-236)||(17132183-17132265)
chr6 (146-215)||(20575696-20575764)
chr6 (147-199)||(28630682-28630734)
[»] chr4 (48 HSPs)
chr4 (117-243)||(31229292-31229418)
chr4 (97-231)||(8408833-8408967)
chr4 (122-231)||(22025095-22025204)
chr4 (98-230)||(26329921-26330053)
chr4 (97-215)||(26329996-26330114)
chr4 (119-215)||(43098401-43098497)
chr4 (97-212)||(9320027-9320142)
chr4 (97-237)||(19631780-19631915)
chr4 (147-230)||(52567750-52567833)
chr4 (98-196)||(2909193-2909291)
chr4 (119-237)||(5387165-5387283)
chr4 (119-237)||(52181754-52181872)
chr4 (119-237)||(52568163-52568280)
chr4 (102-183)||(2788812-2788893)
chr4 (119-215)||(2788964-2789060)
chr4 (122-183)||(22025322-22025383)
chr4 (147-231)||(36890620-36890704)
chr4 (131-231)||(8408393-8408493)
chr4 (122-200)||(26329805-26329883)
chr4 (119-197)||(35046467-35046545)
chr4 (148-222)||(42116050-42116124)
chr4 (119-230)||(43098221-43098328)
chr4 (102-166)||(52183462-52183526)
chr4 (97-229)||(52865973-52866096)
chr4 (97-176)||(2788943-2789022)
chr4 (147-230)||(19632220-19632302)
chr4 (101-237)||(19681214-19681346)
chr4 (148-237)||(5387588-5387677)
chr4 (147-215)||(26330056-26330124)
chr4 (123-215)||(41735796-41735887)
chr4 (134-229)||(35023955-35024050)
chr4 (119-165)||(41735851-41735897)
chr4 (119-191)||(23085220-23085292)
chr4 (147-215)||(43098189-43098257)
chr4 (147-215)||(43098461-43098529)
chr4 (147-199)||(52181722-52181774)
chr4 (100-155)||(31229335-31229390)
chr4 (143-194)||(52866364-52866415)
chr4 (183-229)||(30542723-30542769)
chr4 (119-201)||(35046550-35046632)
chr4 (148-229)||(2508670-2508751)
chr4 (146-183)||(2909181-2909218)
chr4 (147-188)||(52865963-52866004)
chr4 (147-215)||(2789024-2789092)
chr4 (147-199)||(5387133-5387185)
chr4 (143-199)||(23085272-23085327)
chr4 (178-230)||(44915936-44915988)
chr4 (194-230)||(44916294-44916330)
[»] chr3 (19 HSPs)
chr3 (119-230)||(31247618-31247729)
chr3 (119-230)||(4276174-4276285)
chr3 (97-231)||(35555543-35555678)
chr3 (107-237)||(21376593-21376723)
chr3 (146-230)||(35545169-35545254)
chr3 (146-230)||(19153883-19153968)
chr3 (147-227)||(31247194-31247273)
chr3 (147-215)||(4276142-4276210)
chr3 (147-231)||(24707474-24707558)
chr3 (131-231)||(4276598-4276689)
chr3 (119-167)||(14964681-14964729)
chr3 (147-231)||(54456678-54456762)
chr3 (97-160)||(3088137-3088200)
chr3 (194-237)||(21376986-21377029)
chr3 (119-166)||(21377037-21377084)
chr3 (100-163)||(54456896-54456959)
chr3 (117-167)||(50530283-50530333)
chr3 (194-231)||(3088075-3088112)
chr3 (194-231)||(35555956-35555993)
[»] scaffold0027 (4 HSPs)
scaffold0027 (97-230)||(9411-9535)
scaffold0027 (97-181)||(9896-9980)
scaffold0027 (147-215)||(9922-9990)
scaffold0027 (147-215)||(9401-9469)
[»] scaffold0019 (4 HSPs)
scaffold0019 (119-215)||(124346-124442)
scaffold0019 (119-166)||(124335-124382)
scaffold0019 (119-200)||(124182-124262)
scaffold0019 (147-215)||(124150-124218)
[»] scaffold0041 (1 HSPs)
scaffold0041 (97-212)||(45195-45310)
[»] scaffold0374 (2 HSPs)
scaffold0374 (147-237)||(16180-16270)
scaffold0374 (169-230)||(16581-16642)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 35214844 - 35214964
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttg 216  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||  ||||| ||| ||||||||||||||||||||||||||||    
T  35214844 cttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagttg 35214943  T
Q  217 ataaactatttcacctttacc 237  Q
    ||||||||||||||| |||||    
T  35214944 ataaactatttcaccgttacc 35214964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 34951266 - 34951377
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||| ||| |||| ||||||||| ||| |||||||||||    
T  34951266 tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgat 34951365  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  34951366 aaactatttcac 34951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 5805055 - 5805186
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || | |||||| ||| |||| |||    
T  5805055 gacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattcctttaagtttcaaaagttt 5805154  T
Q  197 caaataggtctttttagttgataaactatttc 228  Q
     || |||||| |||||||||||||||||||||    
T  5805155 taactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 10619851 - 10619951
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||||||||||||||||||||||| |||| | |||||||| |||||| ||| |||| ||||||||||||| |||||||||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  231 c 231  Q
    |    
T  10619951 c 10619951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 19925423 - 19925311
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||| ||||||||| |||||| | ||||||||||||||||||||  |||||||| |||||| ||| |||| ||||||||||||| ||| |||||||    
T  19925423 tttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagttgat 19925324  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  19925323 aaactatttcacc 19925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 23679603 - 23679492
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||| ||| |||||| |  |||||||||||||||||||||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttag-tctttaagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  231 ctttacctttgct 243  Q
    | ||||| |||||    
T  23679504 cgttacccttgct 23679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 33235051 - 33235183
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||| | ||||| |||  |||||||||||||||| ||||| ||||||||||||||  |||||||  |||||| ||| |||| |||    
T  33235051 gacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaatttcaaaagttt 33235150  T
Q  197 caaataggtctttttagttgataaactatttca 229  Q
    |||| ||||| ||||||||||||||||||||||    
T  33235151 caaagaggtcattttagttgataaactatttca 33235183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 20366066 - 20366204
Alignment:
Q  98 acagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttc 197  Q
    |||||||||| ||||||  | |||||||||||||||||||||||| || |||||||||||||||||||| | ||| | | | |||  ||| || | ||||    
T  20366066 acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattc-tcagtcaatcccttatatttcaagagtttc 20366164  T
Q  198 aaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  20366165 aaataggtctttttagttgataaactatttcaccgttacc 20366204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 21412883 - 21413001
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||| | ||||||||||||||||||| | |||||||| |||||| ||| |||| |||    
T  21412883 gacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttt 21412982  T
Q  197 caaataggtctttttagtt 215  Q
     |||||| || ||||||||    
T  21412983 taaatagatcattttagtt 21413001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 33235637 - 33235526
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||| |||| |||||||| |||| ||| |||||||||||||| |||| | |||||||| |||||| ||| ||||| |||||||||||| |||||||||||    
T  33235637 tttacgttttgaaagttttaatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgat 33235538  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  33235537 aaactatttcac 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 4187763 - 4187661
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||| |||||| | |||||| |||||||||||| | |||||||| |||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcac 4187664  T
Q  231 ctt 233  Q
    |||    
T  4187663 ctt 4187661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 31176053 - 31175935
Alignment:
Q  108 taagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtct 207  Q
    |||||||| | ||||| ||| ||||||||||||||||| |||||||||||||||||||   |||||||| |||||| ||| |||| ||||||| |||||     
T  31176053 taagttaatcctttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtcc 31175954  T
Q  208 ttttagttgataaactatt 226  Q
    ||||||||||||| |||||    
T  31175953 ttttagttgataatctatt 31175935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 5559145 - 5559266
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttcttt-aacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||| |||||||||| ||| | |||||||||||| | |||||  |||||||| |||| || ||| |||| ||||||||||||| ||||||||    
T  5559145 cttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagtt 5559244  T
Q  216 gataaactatttcacctttacc 237  Q
    |||||||||||||||| |||||    
T  5559245 gataaactatttcaccgttacc 5559266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 31893267 - 31893391
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||       |||||  || |||    
T  31893267 gacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagt-------ctttt--aagttt 31893357  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    |||||||||| ||||||| |||||||||||||||    
T  31893358 caaataggtcattttagtcgataaactatttcac 31893391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 1286408 - 1286511
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    |||||| |||| |||||||||||||||| |||||||||||| |||||||| ||||||||  ||||| ||| |||| ||||||||||||  ||||||||||    
T  1286408 ttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagttga 1286507  T
Q  218 taaa 221  Q
    ||||    
T  1286508 taaa 1286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 28256560 - 28256643
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||||||||||| |||||||| |||||| ||| |||| ||||||||||||  |||||||||||||||||||||||    
T  28256560 cttttagtttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggttcttttagttgataaactatttcac 28256643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 36566295 - 36566413
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattct-taagttagttctttaacttttaaaaatt 195  Q
    ||||||||||||||||||  | ||||||||| |||||||||||||||||  ||||||||||||||||||||  ||||||| ||||||| ||| |||| ||    
T  36566295 gacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttag-tctttaagtttcaaaattt 36566393  T
Q  196 tcaaataggtctttttagtt 215  Q
    ||||||| ||| ||||||||    
T  36566394 tcaaataagtcattttagtt 36566413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 33879623 - 33879505
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||  ||||||  | ||||||||||||||||||||||||||| |||||| ||||||||||||   |||||| | |||||| ||| |||| |||    
T  33879623 gacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagttt 33879524  T
Q  197 caaataggtctttttagtt 215  Q
    |||||||||| ||||||||    
T  33879523 caaataggtccttttagtt 33879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 20101860 - 20101972
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    |||||||||||||||||||||||||| | ||||||||| ||||| ||| | |||||||| |||||| |||||||| ||| |||||| |  | ||||||||    
T  20101860 ttttaagtttcgaaagtttcaattagatccttttagttcgacag-attttcaagttagtcctttaagttttaaaagttttaaatagattctcttagttga 20101958  T
Q  218 taaactatttcacc 231  Q
    ||||||||||||||    
T  20101959 taaactatttcacc 20101972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 21413190 - 21413083
Alignment:
Q  123 agtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaac 222  Q
    |||||||||| |||||||||||  |||||| ||||||||||||  |||||||||| ||||| ||| |||| ||||||||||||| |||||||| ||||||    
T  21413190 agtttcgaaaatttcaattaggcccttttaatttgacagaatttctaagttagtt-tttaagtttcaaaagtttcaaataggtccttttagttcataaac 21413092  T
Q  223 tatttcacc 231  Q
    || ||||||    
T  21413091 tacttcacc 21413083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 4187523 - 4187626
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||||||||| ||| |||| | ||||||||| ||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||| ||| |||| |||    
T  4187523 gacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttcaaaagttt 4187622  T
Q  197 caaa 200  Q
    ||||    
T  4187623 caaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 40904708 - 40904823
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  |||||||||||  |||||||||||||||| |||||||||||||| |||| | || |||||  ||||| |||||||| |||    
T  40904708 gacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagttt 40904807  T
Q  197 caaataggtcttttta 212  Q
    ||||||| || |||||    
T  40904808 caaatagatcctttta 40904823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 1346497 - 1346624
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||||||||||    ||||||||||||||||||||||||  | |||||||||||||| ||||   |||||||| |||||| ||| |||| |||    
T  1346497 gacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcctttaagtttcaaaagttt 1346596  T
Q  197 caaataggtctttttagttgataaactatttc 228  Q
    |||    ||  |||||||||||||||||||||    
T  1346597 caa----gttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 5805679 - 5805581
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    ||||||||| |||||||||||||| || ||||||||||||| ||||| | |||||| |  ||||| ||| |||| ||||||||||||| ||||||||||    
T  5805679 tttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagttga 5805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 23150656 - 23150790
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | ||||| ||| |||||||||||||| ||  ||||| |||||||||||||| |  |||||  ||||| ||| |||| |||    
T  23150656 gacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagtcttttaagtttcaaaagttt 23150755  T
Q  197 caaataggtctttttagttgataaactatttcacc 231  Q
    ||||||  || ||||||||||||||||||||||||    
T  23150756 caaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 31893583 - 31893497
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||  |||||||  | |||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  31893583 gacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcctttaa 31893497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 39959301 - 39959167
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| |||| |||  | ||||| |||  |||||||||| ||| |||||||||||||||||||||   |||||| |  ||||| ||| |||| |||    
T  39959301 gacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatcatttaagtttcaaaagttt 39959202  T
Q  197 caaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||  ||||| ||||||||||||||||||    
T  39959201 caaataggttcttttacttgataaactatttcacc 39959167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 42990539 - 42990657
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| |||||||| ||||||||  |||||||| ||||||||| | |||||| || ||||| |||||||| ||| || || ||| |||||||||||    
T  42990539 tttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagttttaaaagttttaattatgtcattttagttgat 42990638  T
Q  219 aaactatttcacctttacc 237  Q
    | ||||||| ||| |||||    
T  42990639 acactattttaccgttacc 42990657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 27995078 - 27995211
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||   ||||||||||| ||| ||| || ||| |  ||||| |||||||||||||| |||||| | |||||| ||| |||| | |    
T  27995078 gacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctcaagttaatcctttaagtttcaaaagtat 27995177  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    |||||| ||  |||||||||||||||||||||||    
T  27995178 caaataagtaattttagttgataaactatttcac 27995211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 6220449 - 6220351
Alignment:
Q  130 aaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    ||||||||||| |||| |||||||||| | |||||||| ||||||| ||||||| ||| |||| |||  |||||||  ||||||||||||||||||||||    
T  6220449 aaagtttcaataaggtacttttagtttcatagaattctcaagttag-tctttaagtttcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 1441518 - 1441416
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||| ||||||||||||||||||||||  ||||||||||| |||||||  ||||||||       |||||  || ||||||||||||| |||||||||||    
T  1441518 tttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagt-------ctttt--aagtttcaaataggtccttttagttgat 1441428  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  1441427 aaactatttcac 1441416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 35215409 - 35215299
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| |||||||| ||||||||| ||  ||||| ||||||||||||   || |||||  ||||| |||||||| |||||||||  || |||||||||||    
T  35215409 tttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttccaaattagtcttttaagttttaaaagtttcaaataactcattttagttgat 35215310  T
Q  219 aaactatttca 229  Q
    |||||||||||    
T  35215309 aaactatttca 35215299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 22876940 - 22876875
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||| | ||||||    
T  22876940 ttttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctcaagttaatcctttaa 22876875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 21433183 - 21433279
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||| |||||||||| || |||||||||||| |||||||  ||||||||  ||||| ||| |||| ||||||||| ||  ||||||||    
T  21433183 tttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtt 21433279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 21433382 - 21433278
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttc-tttaacttttaaaaatt 195  Q
    ||||||||||  ||||||| | |||||||||| |||||||||| || ||| |||| ||||||||||||||  |||||||| | ||||| ||| |||||||    
T  21433382 gacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtttcaaaaatt 21433283  T
Q  196 tcaaa 200  Q
    |||||    
T  21433282 tcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 27995636 - 27995548
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttac 236  Q
    ||||||| ||||| | || |||||||||| |||||| ||| |||| ||| |||||| || |||||||||||||||||||||||| ||||    
T  27995636 ttttagtatgacatattttttaagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttac 27995548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 31893253 - 31893325
Alignment:
Q  143 ggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||  ||| |||||| |||||| ||||||||    
T  31893253 ggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtt 31893325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 31893593 - 31893525
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||  ||||||||| |||||| |||||||| |||||| |||||| ||||||||    
T  31893593 cttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtt 31893525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 36566285 - 36566353
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||||||||||  ||||| |||| ||| |||||| |||||| ||||||||    
T  36566285 cttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtt 36566353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 5559692 - 5559595
Alignment:
Q  130 aaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||| ||||         || ||||||||| ||||||||||||||| ||||||||||    
T  5559692 aaagtttcaattaggtccttttagtttgacagaattcccaagttagtccttt---------aagtttcaaataagtctttttagttgat-aactatttca 5559603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 20183809 - 20183919
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| ||| ||||||||||||||| | |||| | ||| | ||| |||  |||||||| |||||| ||| |||||||||||||| ||| |||||||||||    
T  20183809 tttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcctttaagtttcaaaaatttcaaataagtcattttagttgat 20183907  T
Q  219 aaactatttcac 230  Q
    ||| ||||||||    
T  20183908 aaattatttcac 20183919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 1349248 - 1349116
Alignment:
Q  108 taagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagtta---gttctttaacttttaaaaatttcaaatagg 204  Q
    |||||||  |||||||||||| ||||||| || ||  |  ||||||||||||||||||   || |||   || |||||| ||| |||| |||||||||||    
T  1349248 taagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaagtttcaaaagtttcaaatagg 1349149  T
Q  205 tctttttagttgataaactatttcacctttacc 237  Q
    || ||||||||||||||| |||||||| |||||    
T  1349148 tcattttagttgataaaccatttcaccgttacc 1349116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 20366623 - 20366521
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||| |||||||| |  || | |||||||||||||| |||||  |||||||| |||||  ||| |||| ||||||||| ||| |||||||||||    
T  20366623 tttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagttgat 20366524  T
Q  219 aaa 221  Q
    |||    
T  20366523 aaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 8039702 - 8039747
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaat 164  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  8039702 tttaagtttcgaaagtttcaattaggtccttttagtttgaaagaat 8039747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 19925147 - 19925239
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||||| | |||||||||||||| |||| |  | ||||| |||||| ||| |||||| ||||||||| | ||||||||    
T  19925147 aagtttcgaaagtttcaattagatccttttagtttgacacaatt-tccaattagtcctttaagtttcaaaaatatcaaataggaccttttagtt 19925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 28257023 - 28256950
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaa 191  Q
    |||||||||| |||| ||||||||||||  ||||||||||||| |||| | |||||||| |||||| |||||||    
T  28257023 ttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttcaagttagtcctttaagttttaaa 28256950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 41020210 - 41020145
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||| |||||||| |||||| | |||||||||||||||||||  ||||||| ||||||||    
T  41020210 ttttaagttttgaaagttttaattagatccttttagtttgacagaatttctaagttaattctttaa 41020145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 5805045 - 5805113
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| |||||||| |||||| |||  ||| |||||| |||||| ||||||||    
T  5805045 cttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 5805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 8039670 - 8039738
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||||| ||||||||||||||| |||  ||| |||||| |||||| ||||||||    
T  8039670 cttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtt 8039738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 8039755 - 8039803
Alignment:
Q  189 aaaaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  8039755 aaaagtttcaaataggtccttttagttgataaactatttcaccgttacc 8039803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 21412873 - 21412941
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||||||||||| | |||||| |||| ||| |||||| ||| || ||||||||    
T  21412873 cttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtt 21412941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 28257054 - 28256986
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||| | |||||| ||||||||| ||||| |||| |||||||||| |||||| ||||||||    
T  28257054 cttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtt 28256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 34951569 - 34951501
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaatt 165  Q
    ||||||||| | ||||||  | ||||||||||||||||||||||||| | |||||||||||||| ||||    
T  34951569 gacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatt 34951501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 42991031 - 42990991
Alignment:
Q  191 aaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  42991031 aaattttaaataggtctttttagttgataaactatttcacc 42990991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 1286450 - 1286505
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtt 155  Q
    |||||||| ||||||  |||||||||||| |||||||||| |||||||||||||||    
T  1286450 agaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagtt 1286505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 33235042 - 33235105
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtcttttt 211  Q
    |||||||||||||||||||| |||||| | |||||| |||||||| |||||| |||||| ||||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtcctttt 33235105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 39958792 - 39958835
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  39958792 tttcaaataggtccttttagttgataaactatttcaccattacc 39958835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 36566532 - 36566486
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacctttaccttt 240  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||    
T  36566532 tttcaaatatgtctttttagttgataaactatttcaccgtcaccttt 36566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 27995068 - 27995133
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtcttttta 212  Q
    ||||||||||||||||||||| ||||||||  ||||| ||| |||||||| |||||| || |||||    
T  27995068 cttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcatttta 27995133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 35214813 - 35214882
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttc-tttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||  ||||||||||| ||||| ||| |||| |||||| |||||| ||||||||    
T  35214813 cttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtt 35214882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 36566377 - 36566458
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||||||| ||| |||||| || ||  ||||||||||||| |||||| |||||||| |||||| ||| |||| |||||||    
T  36566377 tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatttcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 39958704 - 39958773
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattc 166  Q
    |||| |||| ||||||||  | ||||||| |||||||||||||||| ||  |||||||||||||||||||    
T  39958704 gacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattc 39958773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 1346487 - 1346523
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1346487 cttttagtttgacagaattcttaagttagtgctttaa 1346523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 1286854 - 1286772
Alignment:
Q  154 tttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||| |||||| | || ||||| |||||| |||||||| ||| ||||| ||||||| |||||||||| ||||||||| |||||    
T  1286854 tttgatagaattttcaaattagtcctttaagttttaaaagttttaaatatgtctttt-agttgataaattatttcaccgttacc 1286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 8040166 - 8040123
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||    
T  8040166 tttcaaataggtccttttagttgatgaactatttcaccgttacc 8040123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 21433408 - 21433337
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaata 202  Q
    |||||||||||| ||  |||||||||||||||||||  |||||| | |||||| ||| |||| |||||||||    
T  21433408 aagtttcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaata 21433337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 28104304 - 28104387
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||| || |||||  ||| ||||  ||||| ||| |||| ||| ||||| |||||||||||||||||| ||||||||    
T  28104304 cttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcac 28104387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 33879348 - 33879407
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagt 176  Q
    ||||||||||| |||||||| |||||| | |||||| |||||||||||| | ||||||||    
T  33879348 cttttaagttttgaaagttttaattagatccttttattttgacagaattatcaagttagt 33879407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 5075353 - 5075407
Alignment:
Q  145 ttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    ||||||||||||||||||  ||| |||||||| |||||| |||||||| ||||||    
T  5075353 ttcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaa 5075407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 28256570 - 28256628
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtt 155  Q
    ||||||||||| ||||||  | ||||| |||| |||||||||| |||||||||||||||    
T  28256570 gacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggttcttttagtt 28256628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 23150646 - 23150711
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtcttttta 212  Q
    |||||||||||||| |||||| |||||||| |||||| |||| ||| |||||| || ||| |||||    
T  23150646 cttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcatttta 23150711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 31893498 - 31893437
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaa 192  Q
    ||||||||| || || |||||||||||||| |||||| |||||||| |||||| ||| ||||    
T  31893498 aagtttcaaataagtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaaa 31893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 33879633 - 33879568
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtcttttta 212  Q
    ||||||||||||||||||||  |||||||| |||||| |||  ||| |||||| |||||| |||||    
T  33879633 cttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtcctttta 33879568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 1286377 - 1286445
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||| |||||| | || |||||| ||||| ||| |||| |||||| |||||| ||||||||    
T  1286377 cttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtt 1286445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 5559734 - 5559667
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||||  |||||||| |||||| |||| ||| |||||| |||||| ||||||||    
T  5559734 cttttagtttgacaaaattcccaagttagtcctttaagtttt-aaagtttcaattaggtccttttagtt 5559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 28256500 - 28256568
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||  |||||| |||||||| ||| |||| ||| ||| || || ||||||||    
T  28256500 cttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtt 28256568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39959311 - 39959255
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaatag 203  Q
    ||||||||||||||||||| |||| |||||  ||||| ||| |||| ||||||||||    
T  39959311 cttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatag 39959255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 20728567 - 20728685
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||||| |||||||| ||||||||| ||||||||||||||     
T  20728567 tttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtcctttaagttttaaaagtttcaaatatgtctttttagttgaa 20728666  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  20728667 aaactatttcaccgttacc 20728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 36418507 - 36418367
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | |||| ||||| |||||||||||||||| |||||||||||||| |||| | |||||||| |||||| ||| |||| |||    
T  36418507 gacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagttt 36418408  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  36418407 caaataggtccttttagttgataaactatttcaccgttacc 36418367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 6336413 - 6336300
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||| ||||||||| |||||| ||| |||  ||||||||| ||| ||| ||||||    
T  6336413 ttttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttga 6336314  T
Q  218 taaactatttcacc 231  Q
    ||||||||||||||    
T  6336313 taaactatttcacc 6336300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 18248978 - 18249107
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    |||||| ||||||||| |||||| |||| |||||||| || || || |||||||||| |||||||||| ||||||||  ||||| ||| |||| ||| ||    
T  18248978 agaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaattctcaagttagtcatttaagtttcaaaagttttaa 18249077  T
Q  200 ataggtctttttagttgataaactatttca 229  Q
    ||||||||||||||||||||||||||||||    
T  18249078 ataggtctttttagttgataaactatttca 18249107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 32660227 - 32660334
Alignment:
Q  108 taagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtct 207  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| |||||| ||| |||| |||||||||||||     
T  32660227 taagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtca 32660326  T
Q  208 ttttagtt 215  Q
    ||||||||    
T  32660327 ttttagtt 32660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 20729101 - 20729011
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  20729101 cttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattacc 20729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 19278722 - 19278854
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||||||||||  | ||||| |||| ||| ||| |||||| ||||||||||||||||||||||| ||||||  ||||||| ||| || |||||    
T  19278722 gacagaattcttaagttagtcctttaaatttcaaaatttt-aattagcttcttttagtttgacagaattctcaagttacctctttaagtttcaataattt 19278820  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    ||||||  || |||||||||||||||||||||||    
T  19278821 caaataaatcattttagttgataaactatttcac 19278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 237
Target Start/End: Complemental strand, 5735083 - 5734948
Alignment:
Q  101 gaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    ||||||| ||||||  | ||||| |||||||| ||| ||||| || |||||||||| |||||||||| |||||||| |||||| ||  |||| |||||||    
T  5735083 gaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtcctttaagttc-aaaagtttcaaa 5734985  T
Q  201 taggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| |||||||||||||||||||||||| |||||    
T  5734984 taggtcattttagttgataaactatttcaccattacc 5734948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 5734502 - 5734619
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| |||||||||||||| ||  ||||| ||||||||||||| ||||||| | |||||| |||||||| ||||||||| ||| |||||||| ||    
T  5734502 tttaagttttgaaagtttcaattatgtcattttaatttgacagaattcctaagtta-tcctttaagttttaaaagtttcaaataagtcattttagttaat 5734600  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  5734601 aaactatttcaccgttacc 5734619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 30737757 - 30737897
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||| | ||||| |||||||||||||||||| ||  ||||||||||||| |||||| || |||||  ||||| ||| |||| |||    
T  30737757 gacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagtttcaaaagttt 30737856  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
     ||||| ||| ||| |||||||||||| ||| ||| |||||    
T  30737857 taaataagtcatttaagttgataaactgttttaccgttacc 30737897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 230
Target Start/End: Original strand, 36417904 - 36418027
Alignment:
Q  98 acagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttc 197  Q
    |||||||||| ||||||  | ||||| ||||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||         || ||||    
T  36417904 acagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtccttt---------aagtttc 36417994  T
Q  198 aaataggtctttttagttgataaactatttcac 230  Q
    ||||||||| |||||||||||||| ||||||||    
T  36417995 aaataggtccttttagttgataaattatttcac 36418027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 18321295 - 18321225
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaa 192  Q
    |||||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||||    
T  18321295 aagttttgaaagtttcaattaggttcttttaatttgacagaatttttaagttagtcctttaaattttaaaa 18321225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 18951320 - 18951438
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||  ||||||  | |||||||||| ||||||| || ||| | |||||||||||| |||||||| |||||||| |||||| |||||||| |||    
T  18951320 gacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttt 18951419  T
Q  197 caaataggtctttttagtt 215  Q
     ||||||||| ||||||||    
T  18951420 taaataggtcattttagtt 18951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 30738344 - 30738218
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagt--t 215  Q
    ||||||||||||||| ||| ||||||||  ||||| |||||||||||||| ||||| || |||||  ||| |||| ||||||||| ||| |||||||  |    
T  30738344 ttttaagtttcgaaatttt-aattaggtcattttaatttgacagaattctcaagtttgtcctttatgtttcaaaagtttcaaatatgtcattttagttgt 30738246  T
Q  216 gataaactatttcacctttacctttgct 243  Q
    |||||||||||||||| ||||| |||||    
T  30738245 gataaactatttcaccgttacccttgct 30738218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 13543101 - 13543238
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaag---ttagttctttaacttttaaaaa 193  Q
    |||| ||||| ||||||||   |||||||||||||||||||||||||||  |||||||||||  |||||   |||   ||||| |||||| ||| ||||     
T  13543101 gacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttattagtcctttaagtttcaaaag 13543200  T
Q  194 tttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||| ||| |||||||||||||| |||||||||    
T  13543201 tttcaaatatgtcattttagttgataaattatttcacc 13543238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 18237919 - 18238002
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||||||||| |||||||| | |||||| |||||||| ||| ||||| ||| |||||||||||||| ||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcac 18238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 32459912 - 32459829
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||| ||||||| ||||||| || |||||  ||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  32459912 cttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttcac 32459829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 32660281 - 32660379
Alignment:
Q  102 aattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||| ||||||  | |||||||||| |||||||||| |||||  ||||||||||||||||||| ||||||||| |||||| ||| |||| |||||||    
T  32660281 aattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 1722539 - 1722648
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| |||| ||||||| || ||| |||||||||||||||| |||||| |||||| | |||||| ||| |||| ||||||||| ||| |||||||| ||    
T  1722539 tttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtttat 1722638  T
Q  219 aaactatttc 228  Q
    ||| ||||||    
T  1722639 aaattatttc 1722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 13543659 - 13543563
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacctttgct 243  Q
    |||||||||||  ||||||||||||||| | |||||| ||| |||| ||||||||||||  ||||| |||||||||||||||||  |||||| ||||    
T  13543659 cttttagtttggaagaattcttaagttaatcctttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacctatgct 13543563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 32459434 - 32459517
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||||||| |||||  ||||||||  ||||| ||| |||| ||| ||||||||| |||||||||||||||||||||||    
T  32459434 cttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcac 32459517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 35891318 - 35891236
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    |||||||||||||| |||| | |||||||| |||||| ||| |||| ||||||||| || ||||| |||||||||||||||||    
T  35891318 cttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttca 35891236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 26275511 - 26275579
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||  |||||||||||||||| ||| |||| |||||||||| || ||||||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtt 26275579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 35190497 - 35190389
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| ||||||||||||||||| |||||||||||||| |||||| || || ||       |||||  || |||| ||| ||||||||||||||||    
T  35190497 tttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgt-------ctttt--aagtttc-aattggtctttttagttgat 35190408  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  35190407 aaactatttcaccgttacc 35190389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 38405641 - 38405572
Alignment:
Q  98 acagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattct 167  Q
    |||||||||  ||||||| | |||||||||||||||||||||||| ||  |||||||||| |||||||||    
T  38405641 acagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattct 38405572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 13543091 - 13543159
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| ||||| ||||||| |||||||| |||  ||| |||||| |||||||||||||||    
T  13543091 cttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtt 13543159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 1723032 - 1722949
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||| ||| ||||  |||||||||  ||||| |||||||| ||| |||||  || |||||||||||||||||||||||    
T  1723032 cttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcac 1722949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 13538486 - 13538621
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| ||||| |||||||  | |||| ||||||||||||||||||||||   |||||||||| |||||| | |||||| |  |    |||||||   |||    
T  13538486 gacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagttattagtc---cttttaag--ttt 13538580  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  13538581 caaatatgtcattttagttgataaactatttcaccgttacc 13538621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 14235618 - 14235669
Alignment:
Q  130 aaagtttcaattaggttcttttagtttgacagaattcttaagttagttcttt 181  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||| ||||    
T  14235618 aaagttttaattaggtccttttagtttgacagaattctcaagttagtccttt 14235669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 35189952 - 35190026
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaa 193  Q
    |||||||||||||||||| || |||||  |||||||||||||||| ||  |||||||| |||||| ||| |||||    
T  35189952 tttaagtttcgaaagttttaaataggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaaa 35190026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 19278712 - 19278757
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaa 192  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  19278712 cttttagtttgacagaattcttaagttagtcctttaaatttcaaaa 19278757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 19279288 - 19279235
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||||||||||| |||||||||||||||| ||||| ||| |||| |||||||    
T  19279288 cttttagtttgacaaaattcttaagttagttttttaagtttcaaaagtttcaaa 19279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 13543646 - 13543594
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttctttta 152  Q
    |||||||||||||||| | ||||| |||| |||||||||| ||||||||||||    
T  13543646 agaattcttaagttaatcctttaaatttcaaaagtttcaaataggttctttta 13543594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 18238390 - 18238306
Alignment:
Q  152 agtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttac 236  Q
    ||||||||| ||||   ||||||||  ||||| ||| |||| ||| ||||||||| |||||||||||||| ||||||||| ||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttcaccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 18951310 - 18951378
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||  |||||||| |||||| ||| |||| ||| |||||| || ||||||||    
T  18951310 cttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 18951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 35190529 - 35190461
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||| |||||||||||| | |||||| |||||||| |||| ||| |||||| |||||| ||||||||    
T  35190529 cttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtt 35190461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 36418516 - 36418449
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||| |||||| |||||||| |||||  ||| |||| |||||| |||||| ||||||||    
T  36418516 ttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtt 36418449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 38082658 - 38082697
Alignment:
Q  191 aaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  38082658 aaattttaaataggtcattttagttgataaactatttcac 38082697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 6336182 - 6336263
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||||||| ||||||| || |||||  ||||||||||| ||||||   |||||||| |||||| ||| |||| |||||||    
T  6336182 tttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtcctttaagtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 6336150 - 6336218
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||| |||||||   |||||||| |||||| ||| |||| ||| ||||||||| ||||||||    
T  6336150 cttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtt 6336218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 13538476 - 13538544
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| ||||| ||||||||| |||||  |||  ||| |||||| ||||||| |||||||    
T  13538476 cttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtt 13538544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 14235575 - 14235643
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||| | |||| |||||||||| |||||| || ||||| ||| || |||||| ||||||||    
T  14235575 cttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtt 14235643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 23553371 - 23553511
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| || || | | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| ||  ||||| ||| |||| |||    
T  23553371 gacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaatttcaaaagttt 23553470  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  23553471 caaataggtcattttagttgataaactatttcaccgttacc 23553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 36359939 - 36360047
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  |||||||| |||||| |||||||| ||||||||||||| |||||||||||    
T  36359939 tttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctttaagttttaaaagtttcaaataggtcattttagttgat 36360038  T
Q  219 aaactattt 227  Q
    |||||||||    
T  36360039 aaactattt 36360047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 9277100 - 9276955
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||  ||||||  ||||||||||||||||||||||||||| | |||||||||||| ||||||   |||||||| |||||| ||| |||| |||    
T  9277100 gacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagtttcaaaagttt 9277001  T
Q  197 caaataggtctttttagttgataaactatttcacctttacctttgct 243  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||    
T  9277000 caaataggtc-ttttagttgataaactatttcaccgttacccttgct 9276955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 9770902 - 9770768
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | |||||||||||||||||||||||| ||  |||||||||||||||||||  |||||||| |||||| ||| |||| |||    
T  9770902 gacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtcctttaattttcaaaagttt 9770803  T
Q  197 caaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||| ||||||||||||||||||||||||    
T  9770802 caaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 30576776 - 30576636
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| | ||||||  ||| |||||||| |||||||||||||||| ||||||||||||||||||||  |||||||| |||||| ||| |||| |||    
T  30576776 gacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttt 30576677  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
     ||||| ||| |||||||||||||||||||||||| |||||    
T  30576676 taaatatgtcattttagttgataaactatttcaccgttacc 30576636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 44041382 - 44041264
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||  || || ||| |||||||||||||| ||| |||||||||||    
T  44041382 tttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtctttaaagtttcaaaaatttcaaataagtcattttagttgat 44041283  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  44041282 aaactatttcaccattacc 44041264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 9276519 - 9276632
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttg 216  Q
    ||||||||||| |||||||||||||||||  || ||||||||||||||||| ||||||||   |||| |||||||| ||||||||||||| |||||||||    
T  9276519 cttttaagttttgaaagtttcaattaggtctttatagtttgacagaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttg 9276618  T
Q  217 ataaactatttcac 230  Q
    ||||||||||||||    
T  9276619 ataaactatttcac 9276632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 39700901 - 39701041
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||||||||||  | |||||||||  ||||||||||||| || |||||||||||||| ||||| ||||||| | |||||| ||| |||| |||    
T  39700901 gacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaagtttcaaaagttt 39701000  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  39701001 caaatatgtcattttagttgataaactatttcaccgttacc 39701041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 39700841 - 39700959
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||||| ||||  ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||| |||    
T  39700841 gacaaaattcttatgttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagttt 39700940  T
Q  197 caaataggtctttttagtt 215  Q
    ||| || ||| ||||||||    
T  39700941 caattatgtccttttagtt 39700959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 8713862 - 8714002
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | |||||||||| |||||||||||||  |||||||||||||||| |||||  ||||||||  ||||| ||| ||||||||    
T  8713862 gacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtcttttaagtttcaaaaattt 8713961  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||| || |||||||||||||| | ||||||| |||||    
T  8713962 caaatagatcattttagttgataaattgtttcaccgttacc 8714002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 8714448 - 8714324
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||| ||| |||||||||| ||| |||||||||||||| |||||||  ||||||||| ||||| |||  ||| ||| |||||||||||||||||||||    
T  8714448 tttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgat 8714349  T
Q  219 aaactatttcacctttacctttgct 243  Q
    ||||||||||||  |||||| ||||    
T  8714348 aaactatttcactgttacctctgct 8714324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 25730218 - 25730106
Alignment:
Q  119 tttaagtttcgaaagtttcaa-ttaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    ||||||||| ||||||||||| ||||||  ||||| |||||||||||||| |||||||| |||||| ||| |||| ||||||||| ||| ||||||||||    
T  25730218 tttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaatatgtcattttagttga 25730119  T
Q  218 taaactatttcac 230  Q
    |||||||||||||    
T  25730118 taaactatttcac 25730106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 30576168 - 30576301
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||  ||||||  | ||||| ||| |||||||||||||| || ||||||||||| |||||||   ||||||||  ||||| ||| |||| |||    
T  30576168 gacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtcttttaagtttgaaaagttt 30576267  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    ||||| ||||||||||||||||||||||||||||    
T  30576268 caaattggtctttttagttgataaactatttcac 30576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 16197068 - 16197184
Alignment:
Q  120 ttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgata 219  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||  |||||| |  ||||| ||| |||| | ||||||||||| |||||||| |||    
T  16197068 ttaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagttaata 16197167  T
Q  220 aactatttcacctttac 236  Q
    || ||||||||| ||||    
T  16197168 aattatttcaccattac 16197184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 25737704 - 25737592
Alignment:
Q  119 tttaagtttcgaaagtttcaa-ttaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    ||||||||| ||||||||||| ||||||  ||||| |||||||||||||| |||||||| |||||| ||| |||| |||||||||  || ||||||||||    
T  25737704 tttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaatatttcattttagttga 25737605  T
Q  218 taaactatttcac 230  Q
    |||||||||||||    
T  25737604 taaactatttcac 25737592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 45017785 - 45017897
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||||||||| ||  ||||||||| |||||||||  || ||||| ||||||  || |||||||||||||| ||| ||||| |||||    
T  45017785 tttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtcctttaagattcaaaaatttcaaataagtcattttaattgat 45017884  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  45017885 aaactatttcacc 45017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 14871464 - 14871342
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttag-tttgacagaattcttaagttagttctttaacttttaaaaatt 195  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||         || ||    
T  14871464 gacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtccttt---------aagtt 14871374  T
Q  196 tcaaataggtctttttagttgataaactattt 227  Q
    ||||||||||| ||||||||||||||||||||    
T  14871373 tcaaataggtccttttagttgataaactattt 14871342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 25737142 - 25737252
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||| |||||||||| ||| | ||||||||||||| |||||| ||||||||| |||||| ||| |||| ||||| ||| ||| ||||| |||||    
T  25737142 tttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcctttaaatttcaaaagtttcacatatgtcattttacttgat 25737241  T
Q  219 aaactatttca 229  Q
    |||||||||||    
T  25737242 aaactatttca 25737252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 23553984 - 23553851
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  ||||||||||||||| |||| ||||| ||  ||||||||||| |||||||| |||||||||| | || ||| |||| |||    
T  23553984 gacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtttcaaaagttt 23553885  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    ||||||| || | |||||| ||||| ||||||||    
T  23553884 caaatagatcatgttagttaataaattatttcac 23553851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 34686964 - 34686875
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttac 236  Q
    |||||| |||||||||||| | |||||||| |||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| ||||    
T  34686964 cttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 39701509 - 39701376
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||    |||||||||| ||||||||||||| || |||||||||||| |||||||  |  |||||  ||||| ||| |||| |||    
T  39701509 gacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtcatttaagtttcaaaacttt 39701410  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    |||||||||| ||||||||||||||||| |||||    
T  39701409 caaataggtccttttagttgataaactacttcac 39701376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 4613759 - 4613890
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    |||||| | ||||||| | ||||| ||| |||||||||||||| || |||||||||||||| |||| |  ||||||| |||||| ||| |||| ||||||    
T  4613759 agaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaa 4613858  T
Q  200 ataggtctttttagttgataaactatttcacc 231  Q
    |||| |  |||||||| |||||||||||||||    
T  4613859 atagattcttttagtttataaactatttcacc 4613890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 29794374 - 29794240
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||  ||||||  | ||||| ||||||||||||  ||||||| |||||||||||||| ||||   ||||||||  ||||| ||| |||| |||    
T  29794374 gacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttccaagttagtcttttaagtttcaaaagttt 29794275  T
Q  197 caaataggtctttttagttgataaactatttcacc 231  Q
    ||||||| || |||||||||||||| |||||||||    
T  29794274 caaatagatccttttagttgataaattatttcacc 29794240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 31169600 - 31169461
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | |||||||||  |||||||||| ||| |  ||||||||||||  |||||| || ||||| |||||| |||||||| |||    
T  31169600 gacaaaattctcaagttagtcctttaagtttt-aaagtttcaaatagatcattttagtttgacgaaattctcaaattagtcctttaagttttaaaagttt 31169502  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| ||| |||||||||||||| ||||||||| |||||    
T  31169501 caaatatgtcattttagttgataaaatatttcaccgttacc 31169461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 9770577 - 9770656
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagt 176  Q
    ||||||||||  ||||||| | |||||||||||||||||||||||| || |||||||||||| |||||||| ||||||||    
T  9770577 gacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagt 9770656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 13771425 - 13771508
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||||||||||| | ||||||||  ||||| |||||||| |||||||||| |  ||||||||||||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcacc 13771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 35434396 - 35434313
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||||||| ||||| ||||||| | |||||| ||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  35434396 cttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 5358649 - 5358730
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttc 228  Q
    ||||||||||||||||||| | |||||||| ||| || ||| |||| ||| ||||||||| |||||||||||||||||||||    
T  5358649 cttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttc 5358730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 40552778 - 40552911
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| | ||||||| | ||||| ||| |||||||||||||| | | ||||||||||||| |||| | |||||||   ||||| ||| ||||||||    
T  40552778 gacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttcaagttagccatttaaatttcaaaaattt 40552877  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    |||||||||  ||| | |||||||| ||||||||    
T  40552878 caaataggttctttaaattgataaaatatttcac 40552911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 43422896 - 43422992
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||| ||||||||||||||||| |||||| |||  || |||||  |||||||| |||||| ||| |||| ||||||||||||| ||||||||    
T  43422896 tttaagttttgaaagtttcaattaggtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 43422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 43423186 - 43423091
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||||||| || |||||||||| | |||||||| || ||| | |||||| ||| |||| ||||||||||||| ||||||||    
T  43423186 tttaagtttcgaaagtttcaattaagt-cttttagtttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggtcattttagtt 43423091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 16208815 - 16208748
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||| || ||||||||    
T  16208815 ttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagtt 16208748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 40553344 - 40553278
Alignment:
Q  108 taagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagtta 174  Q
    |||||||  |||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||    
T  40553344 taagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtta 40553278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 9770662 - 9770731
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    ||||||||| ||||| ||||||||||||||||||||  |||||||| |||||| ||| ||||||||||||    
T  9770662 aagtttcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 41190398 - 41190329
Alignment:
Q  146 tcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||||| || |||||||||||| |||  |||||||||| |||||| ||||||||    
T  41190398 tcttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtt 41190329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 6235796 - 6235892
Alignment:
Q  148 ttttagtttgacagaattcttaa-gttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacctttgct 243  Q
    |||||||||||||||||||  || |||| | |||||| ||| |||| ||||||||||    ||||||||||||||||||||||||||||||| ||||    
T  6235796 ttttagtttgacagaattccgaaagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacctctgct 6235892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 13771932 - 13771840
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttaccttt 240  Q
    ||||||||||||| |||||  |||||||| |||||| ||| |||| ||||||||| ||| ||||| ||||||||| |||||||  ||||||||    
T  13771932 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgttaccttt 13771840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 39701519 - 39701451
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||| |||||| || ||| ||||||||    
T  39701519 cttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtt 39701451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 16208755 - 16208674
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    ||||||||| | |||||| | |||||||| |||| | ||| |||| ||||||||| ||| ||||||||||||||||||||||    
T  16208755 ttttagttttatagaattttcaagttagtcctttgagtttcaaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 45018013 - 45017934
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||||||||||||||| |||||||| |||||||||||||| | |||  |||||||| |||||| ||| ||||||||||||    
T  45018013 tttaagtttcgaaagttttaattaggtccttttagtttgaca-agttc-caagttagtcctttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 35433903 - 35433999
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacctttgct 243  Q
    |||||| ||||| |||||||  ||||||||  ||||| ||| |||| ||| |||||| ||||||||||||||||| ||||||||  ||||| |||||    
T  35433903 cttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttacccttgct 35433999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 6236323 - 6236214
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||| | |||||||||||||| |||||| ||||||||| |||  |||||||| ||||         || ||||||||||||| ||||| ||||     
T  6236323 tttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtacttt---------aagtttcaaataggtcattttaattgaa 6236233  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||| |||||||    
T  6236232 aaactatttcatctttacc 6236214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 11113567 - 11113653
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||| ||||| |||||||  | ||||| ||| |||||||||||| |||| |||||||||||||||||||   |||||||| ||||||    
T  11113567 gacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcctttaa 11113653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 36314743 - 36314697
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaa 163  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||    
T  36314743 cttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 14871012 - 14871061
Alignment:
Q  154 tttgacagaattcttaagttagttctttaacttttaaaaatttcaaatag 203  Q
    ||||||||||||| ||||||||| |||||| |||||||| ||||||||||    
T  14871012 tttgacagaattcataagttagtcctttaaattttaaaagtttcaaatag 14871061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 40553382 - 40553297
Alignment:
Q  130 aaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||| |||| |||||||||||||| ||||  |||||||||  ||||| ||| |||| |||||| | |||| ||||||||    
T  40553382 aaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtt 40553297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 11113557 - 11113625
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| ||||| ||||||||| |||||| |||| ||| ||||||  ||||| ||||||||    
T  11113557 cttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtt 11113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 25737110 - 25737178
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||| | |||||||| |||||| ||| |||| |||||||||| || ||||||||    
T  25737110 cttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtt 25737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 43423127 - 43423063
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||| |||||||||| |||||  ||||||||||||| |||||  |||||||| ||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagtactttaa 43423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 31169609 - 31169543
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||| |||||| |||||||| |||||| |||| ||| |||||||||| || ||||||||    
T  31169609 ttttagtttgacaaaattctcaagttagtcctttaagtttt-aaagtttcaaatagatcattttagtt 31169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 34686509 - 34686560
Alignment:
Q  179 tttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||| |||||||| ||| |||||| ||||||||||||||| ||||||||||    
T  34686509 tttaagttttaaaagttttaaatagatctttttagttgatagactatttcac 34686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 36360171 - 36360088
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    ||||||||||||||||||||||| || ||  ||||| ||||||| ||||   |||||||| |||||| ||| |||| |||||||    
T  36360171 cttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtcctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 44040860 - 44040911
Alignment:
Q  179 tttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||| ||| |||| ||| ||||||||| |||||||||||||||||||||||    
T  44040860 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcac 44040911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 29792612 - 29792558
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagtt 173  Q
    ||||| ||||||||||||| ||||| | |||||||||||||| |||||| |||||    
T  29792612 tttaaatttcgaaagtttctattagatccttttagtttgacataattctcaagtt 29792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 29030212 - 29030175
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagttt 156  Q
    |||||||||||||||||||||||| || ||||||||||    
T  29030212 tttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 41190365 - 41190288
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||| |||||||| ||||||||||||  ||||||||||| |||||||| ||  ||||  ||||| ||| ||||||||    
T  41190365 tttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtttcaaaaattt 41190288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 8713852 - 8713904
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    |||||||||||||| |||||| |||||||| |||||| ||| |||| ||||||    
T  8713852 cttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaa 8713904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 9770912 - 9770844
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||||| |||||||| |||||| |||  ||| |||||| || ||| ||||||||    
T  9770912 cttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtt 9770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 25737738 - 25737670
Alignment:
Q  145 ttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa-taggtcttttta 212  Q
    |||||||||||||| ||||||   |||||||| |||||| |||| ||| ||||||| ||||||||||||    
T  25737738 ttcttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcttttta 25737670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 30576786 - 30576718
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||| | ||||||||  | ||| ||| |||| |||||| |||||| ||||||||    
T  30576786 cttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtt 30576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 36359907 - 36359975
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||   |||||||| |||||| |||  ||| |||||| ||||| |||||||||    
T  36359907 cttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtt 36359975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 43422956 - 43423020
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||| |||||||||| |||||  ||||||||||||| ||||   |||||||| ||||||    
T  43422956 tttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaa 43423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 44041414 - 44041346
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||| | |||||||| |||||| |||| ||| |||||| || ||| ||||||||    
T  44041414 cttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtt 44041346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 27893668 - 27893536
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||| |||| |||    
T  27893668 gacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttt 27893569  T
Q  197 caaataggtctttttagttgataaactatttca 229  Q
    ||||||| || ||||||||||||||||||||||    
T  27893568 caaatagatcattttagttgataaactatttca 27893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 31264244 - 31264132
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||   ||||||||| ||||| ||| |||| ||||||||||||| |||||||||||    
T  31264244 tttaagtttcgaaagtttcaattaagtccttttagtttgacagaatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgat 31264145  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  31264144 aaactatttcacc 31264132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 30907090 - 30907206
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||| ||| |||| |||    
T  30907090 gacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagttt 30907189  T
Q  197 caaataggtctttttag 213  Q
    ||||||| || ||||||    
T  30907190 caaatagatccttttag 30907206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 36196589 - 36196471
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||   ||||||||  ||| | ||| |||| ||||||||||||| |||||||||||    
T  36196589 tttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtcatttgagtttcaaaagtttcaaataggtcattttagttgat 36196490  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  36196489 aaactatttcaccgttacc 36196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 31263953 - 31264049
Alignment:
Q  109 aagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggt 205  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||| ||| |||| ||||||||||||    
T  31263953 aagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggt 31264049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 34336073 - 34336185
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||||||  |||||||| |||||| ||| |||| ||| |||||||||||||||||| ||    
T  34336073 tttaagttttgaaagtttcaattatgtcattttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaataggtctttttagttaat 34336172  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  34336173 aaactatttcacc 34336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 236
Target Start/End: Original strand, 19080645 - 19080784
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||||||||| | | |||| | ||||||||| |||||||||||||||||  |||||||||||||||||| | |||||||   ||||| ||| |||| |||    
T  19080645 gacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagttt 19080744  T
Q  197 caaataggtctttttagttgataaactatttcacctttac 236  Q
    || ||||||| |||||||||||||||||||||||| ||||    
T  19080745 catataggtccttttagttgataaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 27893051 - 27893188
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||| | ||||| ||||||||||||||||||  |  |||||||||||||| ||||  |||||||| ||||         || |||    
T  27893051 gacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattcccaagttagtccttt---------aagttt 27893141  T
Q  197 caaataggtctttttagttgataaactatttcacctttacctttgct 243  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||    
T  27893142 caaataggtctttttagttgataaactatttcaacgttacctctgct 27893188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 11871835 - 11871718
Alignment:
Q  120 ttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgata 219  Q
    |||||||| |||| ||||||||| || || ||||||||||||||||||  ||||||| |||||| ||| |||| ||| ||||| ||| ||||||||||||    
T  11871835 ttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgata 11871736  T
Q  220 aactatttcacctttacc 237  Q
    || ||||| ||| |||||    
T  11871735 aattatttaaccgttacc 11871718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 32341409 - 32341518
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttc-tttaacttttaaaaatt 195  Q
    ||||| ||||||||||||| | ||||| |||||||| ||| ||||| ||||||||||||||| |||||| | || ||||| | ||||| |||||||||||    
T  32341409 gacaggattcttaagttaatcctttaaatttcgaaaatttgaattaagttcttttagtttgaaagaattttcaaattagtccttttaagttttaaaaatt 32341508  T
Q  196 tcaaataggt 205  Q
    ||||||||||    
T  32341509 tcaaataggt 32341518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 30907400 - 30907316
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttctttt-agtttgacagaattcttaagttagttctttaacttttaaaaatttcaaata 202  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| |||||| ||| |||| |||||||||    
T  30907400 tttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtcctttaagtttcaaaagtttcaaata 30907316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 15506040 - 15506136
Alignment:
Q  135 ttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||||| |||||||||||||| |||||| || ||| | |||||| ||| |||| ||| ||| ||||| ||||| ||||||||||||||||||    
T  15506040 ttcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcacc 15506136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 15506562 - 15506478
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||| |||| |||||||||| || |||||| ||||| |||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  15506562 cttttggtttaacagaattctcaatttagttatttaaattttaaaagttttaaatatgtccttttagttgataaactatttcacc 15506478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 16781157 - 16781049
Alignment:
Q  97 gacagaattcttaagttaaac-ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatt 195  Q
    ||||||||||| ||||||  | |||||||||| |||||||| |||||||| |||||||||||||| |||||  |||||||| |||||| ||| |||| ||    
T  16781157 gacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtcctttaaatttcaaaagtt 16781058  T
Q  196 tcaaatagg 204  Q
    |||| ||||    
T  16781057 tcaattagg 16781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 41265330 - 41265227
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||||||||| || || ||| |||||||||||||| |||||||| ||||         || ||||||||| ||| |||||||||||    
T  41265330 tttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtccttt---------aagtttcaaataagtcattttagttgat 41265240  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  41265239 aaactatttcacc 41265227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 31264001 - 31264087
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    ||||||||||| ||||||  | |||||||||| |||||||||| |||||||||||  |||||||||||||  |||||||| ||||||    
T  31264001 gacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtactttaa 31264087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 34336381 - 34336263
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| || |||  | ||||| |||||||||||||| ||| || |||||| ||||||| |||||| || |||||||||||| ||| |||| |||    
T  34336381 gacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagttt 34336282  T
Q  197 caaataggtctttttagtt 215  Q
    |||||| ||| || |||||    
T  34336281 caaataagtccttgtagtt 34336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 42117264 - 42117174
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||| ||||| |  ||||||||| |||||| ||| |||| ||| ||||||||| ||||||||||||||| |||||||| |||||    
T  42117264 cttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 42117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 8260402 - 8260507
Alignment:
Q  98 acagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttc 197  Q
    |||||||||| || |||  | ||||||||||||||||||||||||| |  ||||||||||||||| |||| || ||| |  ||||| ||| |||| ||||    
T  8260402 acagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaattttcaaaagtttc 8260501  T
Q  198 aaatag 203  Q
    ||||||    
T  8260502 aaatag 8260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 34429687 - 34429752
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtcttttta 212  Q
    ||||||||||||||||||||| |||||||| |||||| |||  |||||||||| |||||| |||||    
T  34429687 cttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtcctttta 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 39376215 - 39376314
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaa 221  Q
    |||||| ||||||||||| ||| | |||||||||| || |||||| |||||||||       ||||   |||||||||||| ||||||||||||||||||    
T  39376215 aagttttgaaagtttcaactagatccttttagttttacggaattcctaagttagt-------cttt---aaatttcaaataagtctttttagttgataaa 39376304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 19081115 - 19081055
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttg 157  Q
    ||||||||||| || |||  |||||||||||||||||||||||||||||  ||||||||||    
T  19081115 gacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 37543187 - 37543119
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaatt 165  Q
    ||||||||| | ||||||  ||||||||||| |||||||||||||| || |||||||||||||| ||||    
T  37543187 gacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatt 37543119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 39376491 - 39376399
Alignment:
Q  120 ttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtcttttta 212  Q
    |||||||||||||||||  |||||||  |||||  |||||||||||   |||||||| |||||| ||| |||  |||||||||||||||||||    
T  39376491 ttaagtttcgaaagttttgattaggtctttttaaattgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtcttttta 39376399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 20535556 - 20535593
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20535556 tttcaaataggtcattttagttgataaactatttcacc 20535593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 30907079 - 30907148
Alignment:
Q  146 tcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  ||| |||||| |||||| ||||||||    
T  30907079 tcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtt 30907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 5116895 - 5116947
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    ||||||||||||||| |||||||||||||| |||| |||| ||||| ||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaa 5116947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 34429697 - 34429765
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaatt 165  Q
    ||||||||||| ||||||  | ||||| |||||||| |||||||||||| |||||| ||||| ||||||    
T  34429697 gacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatt 34429765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 37543201 - 37543129
Alignment:
Q  143 ggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||| | ||||||||  ||||| |||| ||| |||||| || ||| ||||||||    
T  37543201 ggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtt 37543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 39301941 - 39301873
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||| |||||| |||||||||| |||||| |||||||| ||| || ||  |||||||||||    
T  39301941 cttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtt 39301873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 5117134 - 5117052
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||| ||||||||| |||||||||  ||||| | |  ||| ||| ||||| |||||||||||||||||| |||||||||    
T  5117134 ttttagtttcacagaattcataagttagtg-tttaagtatcgaaagttttaaatatgtctttttagttgataaattatttcacc 5117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 20536039 - 20535936
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||| ||||||||| |||||  |  ||||||||||||| |||||| ||||||||       |||||||   ||||||||| ||||| |||||||||    
T  20536039 tttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagt-------cttttaag--tttcaaataagtcttgttagttgat 20535949  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  20535948 aaactatttcacc 20535936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 32341490 - 32341549
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagt 176  Q
    |||||||||||  ||| |||||| |||||||||||| |||||||||||||| || |||||    
T  32341490 cttttaagttttaaaaatttcaaataggttcttttattttgacagaattctcaatttagt 32341549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 39301371 - 39301473
Alignment:
Q  135 ttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcaccttt 234  Q
    ||||||||| | |||||||||| ||| |||| | |||||||| |||||| ||| | |||||| ||||||||  || || ||| |||||||||||||| ||    
T  39301371 ttcaattagatccttttagtttcacataattatcaagttagtcctttaa-tttcataaattttaaataggttcttgtaattgttaaactatttcaccatt 39301469  T
Q  235 acct 238  Q
    ||||    
T  39301470 acct 39301473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 37542983 - 37543049
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||| ||||   |||||||| ||||||    
T  37542983 cttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaa 37543049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 39301880 - 39301807
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||||||||||| |||||||| |||||||| |||         |||||||| | |||||||||||||||||||||||    
T  39301880 ttttagtttgacagaatttttaagttatttctttaagttt---------caaataggccattttagttgataaactatttcac 39301807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 21813250 - 21813287
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  21813250 tttcaaaaaggtccttttagttgataaactatttcacc 21813287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 32341395 - 32341448
Alignment:
Q  143 ggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||||||||||| |||||||||||| | |||||| |||  |||||||    
T  32341395 ggttcttttagtttgacaggattcttaagttaatcctttaaatttcgaaaattt 32341448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 16781166 - 16781098
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttc-tttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||| |||||||| | ||||| |||| ||| ||| || |||||| ||||||||    
T  16781166 ttttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtt 16781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 27893041 - 27893109
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| |||||| | |||||| |||  ||| |||||| ||  |||||||||||    
T  27893041 cttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtt 27893109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 620 - 509
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||| |||||||| |||||| ||| |||| ||||||||||||| |||||||||||    
T  620 tttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagttgat 521  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  520 aaactatttcac 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 38 - 170
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | || ||||||| ||||||| || ||  | ||||||||||||| |||||| |||||||||  ||||| ||| |||| |||    
T  38 gacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagta-tttaagtttgaaaagttt 136  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    |||||| ||| |||||||||||||||||||||||    
T  137 caaatatgtcattttagttgataaactatttcac 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 27351068 - 27351208
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||  ||||||  | |||||||||||||||||||||||| || |||||||||||||| |||||| |||||||| |||||| ||| |||| | |    
T  27351068 gacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtat 27351167  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  27351168 caaataagtcattttagttgataaactatttcaccgttacc 27351208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 10686821 - 10686681
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| | ||||||  | |||||||||||||||||| | |||||| |||||| ||  |||||||||| ||||||||  ||||| |||||||| |||    
T  10686821 gacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtcatttaagttttaaaagttt 10686722  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  10686721 caaataggtcattttagttgataaactatttcaccgttacc 10686681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 48352829 - 48352703
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttg 216  Q
    ||||||||||||||||| |||||||||||   |||||||||||| |||||  |||||||| |||||| ||| |||| ||| ||||||||| |||||||||    
T  48352829 cttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaataggtcattttagttg 48352730  T
Q  217 ataaactatttcacctttacctttgct 243  Q
    ||||||||||||||  ||||| |||||    
T  48352729 ataaactatttcactgttacccttgct 48352703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 44964159 - 44964063
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||| |||||| | |||||| |||||||| ||||||||||||| ||||||||    
T  44964159 tttaagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtt 44964063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 44964121 - 44964018
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  | |||||||||  |||||||||| ||||| ||||||||||||||||||||| |||||||| |||||| |||||||| |||    
T  44964121 gacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 44964022  T
Q  197 caaa 200  Q
    ||||    
T  44964021 caaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 8902803 - 8902911
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaa 221  Q
    ||||||||||||||||||||| ||  ||||||||||||| |||||  |||||||| |||||| ||| |||| ||| ||||| ||| ||||||||||||||    
T  8902803 aagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaa 8902902  T
Q  222 ctatttcac 230  Q
     ||||||||    
T  8902903 ttatttcac 8902911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 11897859 - 11897945
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||||| ||||||||||||||||||||  |||||| | ||||||    
T  11897859 gacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagttaatcctttaa 11897945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 44963878 - 44963990
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||||||| | || |||||||||||| || ||||  || ||||| |||||| ||| |||| ||| |||||  |||||| |||||||    
T  44963878 tttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgat 44963977  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  44963978 aaactatttcacc 44963990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 4030320 - 4030390
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttc-ttttagtttgacagaattc 166  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4030320 gacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 1765731 - 1765844
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttga 217  Q
    ||||||||||||||| ||| ||| ||||  | ||||||||||| ||||  ||| ||||| |||||| ||| |||| ||| |||||| || ||||||||||    
T  1765731 ttttaagtttcgaaaattttaatcaggtcatgttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagttga 1765830  T
Q  218 taaactatttcacc 231  Q
    ||||||||||||||    
T  1765831 taaactatttcacc 1765844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 29419136 - 29419051
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaata 202  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||  || |||||  ||||| ||| |||| |||||||||    
T  29419136 ctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagtcttttaagtttcaaaagtttcaaata 29419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 34254516 - 34254649
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| |||||   | |||||| ||| ||||||| || ||| | |||||||||||||||||||| ||||| ||| |||||| ||| |||| |||    
T  34254516 gacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcagtcctttaagtttcaaaagttt 34254615  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    ||||||  |  ||||||| |||||||||||||||    
T  34254616 caaatatatgcttttagtcgataaactatttcac 34254649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 39302336 - 39302427
Alignment:
Q  145 ttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttac 236  Q
    ||||||||||||||||||||||  || ||| |||||||| ||| |||| |||| | |||||  |||||||||||||||||||||||| ||||    
T  39302336 ttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 1766035 - 1765917
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  ||||||| |||| ||||||| ||||| ||  |||||||||||||||| ||| | |||||| ||||||  || |||| |||    
T  1766035 gacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagcttcaaaagttt 1765936  T
Q  197 caaataggtctttttagtt 215  Q
    |||||| ||| ||||||||    
T  1765935 caaataagtcattttagtt 1765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 17898933 - 17898837
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||  ||| |||||||||||| |||||||||||| |||||||  || ||||| |||||| ||| |||| ||||||||| ||| ||||||||    
T  17898933 tttaagttttaaaaatttcaattaggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtt 17898837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 17898965 - 17898897
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||  ||||| || |||||||||||| ||||||||||||||| |||||| ||||||||    
T  17898965 cttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtt 17898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 49650580 - 49650648
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||||| |||||||| |||||| |||| |||||||||| |||||| ||||||||    
T  49650580 cttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtt 49650648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 49650590 - 49650674
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttcttt 181  Q
    |||| |||||| ||||||  | ||||| ||| |||| |||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  49650590 gacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttt 49650674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 10685865 - 10685996
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| | ||||||  | ||||||||||||| |||||||||| ||  ||||||||||||||||||   |||||||| ||||         || |||    
T  10685865 gacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtccttt---------aagttt 10685955  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| ||| |||||||||||||||||||| ||| |||||    
T  10685956 caaatatgtcattttagttgataaactattttaccgttacc 10685996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 39302805 - 39302753
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||| ||||||    
T  39302805 cttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaa 39302753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 49651083 - 49650984
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaa 221  Q
    ||||||||||||||| || ||| |  |||||||||||||||||||| |||||||| ||||         || |||||||||||||  |||||||||||||    
T  49651083 aagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtccttt---------aagtttcaaataggtccctttagttgataaa 49650993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 2965499 - 2965582
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||||| ||||| | ||||||   |||||| ||| |||| ||| ||||| ||| ||||||||||||||||||||||||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcacc 2965582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 4030763 - 4030721
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacctttac 236  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  4030763 tttcaaataggtcattttagttggtaaactatttcacctttac 4030721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 48352306 - 48352351
Alignment:
Q  186 tttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  48352306 tttaaaagtttcaaataggttcttttagttgataaactatttcacc 48352351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 35701404 - 35701476
Alignment:
Q  102 aattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagtta 174  Q
    |||| |||| |||| ||||||||||| |||||||| |||||| |  ||||||||| |||||||| ||||||||    
T  35701404 aatttttaatttaatcttttaagttttgaaagttttaattagatctttttagtttaacagaatttttaagtta 35701476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 11897850 - 11897917
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||| ||||||||  ||||| |||  ||| |||||| |||||| ||||||||    
T  11897850 ttttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtt 11897917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 17898873 - 17898794
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttca 198  Q
    |||||||||| |||||||||| || ||  |||||||||||||||||| | || ||||| |||||| ||| |||| |||||    
T  17898873 tttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaaatttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 8903335 - 8903253
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||| |||||| |||||| | |||||| |||  ||| |||||||||  || ||||||||| |||| ||||||||    
T  8903335 ttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcac 8903253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 4030310 - 4030379
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggt-ctttttagtt 215  Q
    |||||||||||||| ||||||||||||| | |||||| |||  ||| |||||| ||||| ||||||||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtt 4030379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 4772723 - 4772658
Alignment:
Q  118 ttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||| |||| ||| |||| ||| |||||||||||||||||||   |||||||| ||||||    
T  4772723 ttttaagttttgaaatttttaattgggtccttttagtttgacagaatttccaagttagtcctttaa 4772658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 10685855 - 10685923
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||| | |||||||| |||||| |||  ||  |||||| || ||||||||||||    
T  10685855 cttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtt 10685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 27351620 - 27351556
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||||||||||| ||||| ||  ||||| ||||| |||||||| || ||||| ||||||    
T  27351620 tttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtcctttaa 27351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 34254506 - 34254574
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| ||||| || ||||||  || |||| ||| |||||| || ||||||||    
T  34254506 cttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtt 34254574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 39302370 - 39302406
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtt 155  Q
    |||||||||| |||||||| |||||||||||||||||    
T  39302370 tttaagtttcaaaagtttcgattaggttcttttagtt 39302406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 28583 - 28694
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||  || |||| ||||||||||||| |||||||||||    
T  28583 tttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaaattcaaaagtttcaaataggtcattttagttgat 28682  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  28683 aaactatttcac 28694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 17180241 - 17180106
Alignment:
Q  102 aattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaat 201  Q
    |||| |||| |||| | |||||||||||||||||| ||||| || |||||||||||||| |||| | |||||||| |||||| |||||||| ||||||||    
T  17180241 aatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaat 17180142  T
Q  202 aggtctttttagttgataaactatttcacctttacc 237  Q
    || || |||||||||||||||||||||||| |||||    
T  17180141 agatcattttagttgataaactatttcaccgttacc 17180106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 24139593 - 24139482
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||| ||||| || |||||||||||| |||||| | | |||||| |||||| ||| |||||||||||||| |||||||||||||||    
T  24139593 tttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcctttaagtttcaaaaatttcaaataagtctttttagttgat 24139494  T
Q  219 aaactatttcac 230  Q
    ||| ||||||||    
T  24139493 aaattatttcac 24139482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 20575451 - 20575559
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||||   |||||||| |||||| |||||||| ||||||||||||| ||| |||||||    
T  20575451 tttaagtttcgaaagttttaaataggtccttttagtttgatagaatttccaagttagtcctttaagttttaaaagtttcaaataggtcatttcagttgat 20575550  T
Q  219 aaactattt 227  Q
    |||||||||    
T  20575551 aaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 32417798 - 32417686
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| ||||||||||||||||||||| |||| ||||||||| ||||  |||||||||  ||||| ||| | || ||||||||||||| |||||||||||    
T  32417798 tttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgat 32417699  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  32417698 aaactatttcacc 32417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 32423639 - 32423527
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| ||||||||||||||||||||| |||| ||||||||| ||||  |||||||||  ||||| ||| | || ||||||||||||| |||||||||||    
T  32423639 tttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgat 32423540  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  32423539 aaactatttcacc 32423527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 17179661 - 17179764
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttg 216  Q
    |||||||||||||||| ||| |||||||| | |||||||||| |||||| | |||||||| |||||| ||| |||||||||||||||||| |||||||||    
T  17179661 cttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagttg 17179760  T
Q  217 ataa 220  Q
    ||||    
T  17179761 ataa 17179764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 2839645 - 2839765
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    |||||||| ||||||  | |||||||||| |||||||||||||||| |||||| |||||||||||||| |||||||| ||||         |||||||||    
T  2839645 agaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtccttt---------aaatttcaa 2839735  T
Q  200 ataggtctttttagttgataaactatttca 229  Q
    |||||| |||||||||||||||||||||||    
T  2839736 ataggtttttttagttgataaactatttca 2839765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 10862695 - 10862554
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttcttt-aacttttaaaaatt 195  Q
    ||||||||||| ||||||  | ||||||||| |||||||||||||| ||  ||||||||||| |||||||   |||||||  ||| || ||| |||| ||    
T  10862695 gacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcattttaaatttcaaaagtt 10862596  T
Q  196 tcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  10862595 tcaaataggtccttttagttgataaactatttcaccgttacc 10862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 10962780 - 10962901
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaa 221  Q
    |||||||||||||||||||||| | |||||| ||| | ||||||  ||| ||||| |||||| |||||||| ||||||||| ||| ||||||||||||||    
T  10962780 aagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaa 10962879  T
Q  222 ctatttcacctttacctttgct 243  Q
    |||||| ||| ||||| |||||    
T  10962880 ctattttaccgttacccttgct 10962901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 11527553 - 11527684
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| ||||| |||||||  | ||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||| ||||         || |||    
T  11527553 gacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtccttt---------aagttt 11527643  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  11527644 caaataggtcattttagttgataaactatttcaccgttacc 11527684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 16168776 - 16168680
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||   |||  ||| |||| ||||||||||||||||||||||    
T  16168776 tttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtt 16168680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 16168504 - 16168607
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||   |||||||| ||||         || ||||||||||||| |||||||||||    
T  16168504 tttaagttttgaaagtttcaattaggtcattttagtttgacagaatttccaagttagtccttt---------aagtttcaaataggtccttttagttgat 16168594  T
Q  219 aaactatttcacc 231  Q
    |||||||||||||    
T  16168595 aaactatttcacc 16168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 11528130 - 11528019
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||  |||||||||| ||  |||||||||||||||| || ||  || ||| | |||||| ||| |||| ||||||||| ||| |||||||||||    
T  11528130 tttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgat 11528031  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  11528030 aaactatttcac 11528019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 9902372 - 9902286
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    ||||||||| | ||||||  |||||||||||||||||||| ||||| || |||||||||||||| |||||   ||||||||||||||    
T  9902372 gacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattcccgagttagttctttaa 9902286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 28630724 - 28630593
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| ||||| |||||||   |||||||||| |||||||||||||||   | |||||||||  ||||||| ||||||||| ||||||  ||             
T  28630724 gacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattcctaagttagtactttaagctt--------- 28630634  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  28630633 caaataggtccttttagttgataaactatttcacctttacc 28630593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 10407316 - 10407399
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||||||| ||||| || |||| | |||||| ||| |||| ||||||||| ||| |||||||||||||| ||||||||    
T  10407316 cttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcac 10407399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 9901966 - 9902048
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    ||||||||||| |||||||   |||||||| |||| | ||| |||| ||| ||||||||| ||||||||||||||||||||||    
T  9901966 cttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttca 9902048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaat 201  Q
    ||||||||| ||||| ||||||||||||||||||||  |||||||| |||||| ||| |||| ||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 32417486 - 32417604
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| | ||||||  | |||||||||||||||||| ||||| ||  ||||||||||||| |||| | ||||||||  ||||| ||| |||| |||    
T  32417486 gacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttt 32417585  T
Q  197 caaataggtctttttagtt 215  Q
     ||||| ||| ||||||||    
T  32417586 taaatatgtccttttagtt 32417604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 32423327 - 32423445
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||| | ||||||  | |||||||||||||||||| ||||| ||  ||||||||||||| |||| | ||||||||  ||||| ||| |||| |||    
T  32423327 gacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttt 32423426  T
Q  197 caaataggtctttttagtt 215  Q
     ||||| ||| ||||||||    
T  32423427 taaatatgtccttttagtt 32423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 10407800 - 10407716
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaa-tttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||||||| || ||||||| ||||||||  || || |||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  10407800 cttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcac 10407716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 10862705 - 10862637
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| |||||||| |||||| |||| ||| |||||| || ||| ||||||||    
T  10862705 cttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtt 10862637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 9946727 - 9946681
Alignment:
Q  191 aaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||    
T  9946727 aaatttcaaagaggtccttttagttgataaactatttcaccgttacc 9946681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 2840071 - 2840034
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2840071 tttcaaataggtcattttagttgataaactatttcacc 2840034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 16168472 - 16168540
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||| |||||||| | |||||| |||||| |||| ||| |||||| |||||| ||||||||    
T  16168472 cttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtt 16168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 20575753 - 20575675
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagt 176  Q
    ||||||||||| ||||||   ||||||||||||||||||| || || || |||||||||||||| |||||  ||||||||    
T  20575753 gacagaattctcaagttagt-ttttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagt 20575675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 32417829 - 32417762
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||| |||||||||  |||||||||||||||||||  ||| |||||| |||||| ||| ||||    
T  32417829 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtt 32417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 32423670 - 32423603
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||| |||||||||  |||||||||||||||||||  ||| |||||| |||||| ||| ||||    
T  32423670 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtt 32423603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 17132265 - 17132183
Alignment:
Q  154 tttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttac 236  Q
    |||||||||||||| |||||| | |||||| ||| ||||  |||||||| ||| | |||||| ||||||||||| ||| ||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttac 17132183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 20575764 - 20575696
Alignment:
Q  146 tcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||||| ||||||||| ||||| |||  ||| ||| ||||| ||| ||||||||    
T  20575764 tcttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtt 20575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 28630734 - 28630682
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    |||||||||||||| ||||| |||||||||| ||||| |||| ||| ||||||    
T  28630734 cttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaa 28630682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 31229292 - 31229418
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttg 216  Q
    |||||||||||||||||||||| ||||||  ||||||||||| |||||||| ||||||||  ||||| ||| |||| ||||||||||||  |||||||||    
T  31229292 cttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagttg 31229391  T
Q  217 ataaactatttcacctttacctttgct 243  Q
    ||||||||||||||| |||||| ||||    
T  31229392 ataaactatttcaccgttacctctgct 31229418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 8408967 - 8408833
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | |||||||||||||| ||||||| | |||||||||||||||||||||| | ||||||||  ||||| ||| |||| |||    
T  8408967 gacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttcaagttagtcatttaagtttcaaaagttt 8408868  T
Q  197 caaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||| | ||||||||||||||||||||||    
T  8408867 caaataggtcatcttagttgataaactatttcacc 8408833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 22025095 - 22025204
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaa 221  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||  || |||| ||||||||||||  ||||||||||||||    
T  22025095 aagttacgaaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaa 22025194  T
Q  222 ctatttcacc 231  Q
    ||||||||||    
T  22025195 ctatttcacc 22025204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 26330053 - 26329921
Alignment:
Q  98 acagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttc 197  Q
    |||||||||  ||||||  | |||||||||| |||||||||| ||||| |||||||||||||| |||||  ||||||||  ||||| ||| |||| ||||    
T  26330053 acagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttc 26329954  T
Q  198 aaataggtctttttagttgataaactatttcac 230  Q
    ||||||||| |||||||||||||||||||||||    
T  26329953 aaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 26330114 - 26329996
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  | ||||||||| ||||||||||||||| | |||||||||| |||||||||  |||||||| |||||| ||| |||| |||    
T  26330114 gacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcctttaagtttcaaaagttt 26330015  T
Q  197 caaataggtctttttagtt 215  Q
    |||||||||| ||||||||    
T  26330014 caaataggtccttttagtt 26329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 43098497 - 43098401
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||| |||||| ||| |||| ||||||||| ||| ||||||||    
T  43098497 tttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtt 43098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 9320027 - 9320142
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||  ||||| ||| |||| |||    
T  9320027 gacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatttcaaaagttt 9320126  T
Q  197 caaataggtcttttta 212  Q
    ||||||| || |||||    
T  9320127 caaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 19631780 - 19631915
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||  |   ||||   || |||    
T  19631780 gacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttaattagt--ccttt---aagttt 19631874  T
Q  197 caaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||| |||||||||||||||||||| ||| |||||    
T  19631875 caaataggtcattttagttgataaactattttaccgttacc 19631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 52567750 - 52567833
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||| ||| ||||||||| |||||||||||||||||||||||    
T  52567750 cttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcac 52567833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 2909193 - 2909291
Alignment:
Q  98 acagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||||||||| ||||||    |||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||| ||| ||||||||    
T  2909193 acagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatttcaaaaattt 2909291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 5387165 - 5387283
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    |||||||||  |||||||||||||  |  |||||||||||||||||||  |||||||  |||||| ||| |||| |||||||||| ||||||||||||||    
T  5387165 tttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaagtttcaaaagtttcaaatagatctttttagttgat 5387264  T
Q  219 aaactatttcacctttacc 237  Q
    |||| |||||||| |||||    
T  5387265 aaacaatttcaccgttacc 5387283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 52181754 - 52181872
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| ||| |||||||||||| | || ||||||||||||||||||||  |||||||| |||||| ||| |||| ||||||| | ||| ||||| |||||    
T  52181754 tttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaacatgtcattttaattgat 52181853  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  52181854 aaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 52568280 - 52568163
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||| |||| ||||||||||||||||  ||||||||||| |||||||| |||| ||| |||||| ||| |||| |||||||||| ||  ||||||||||    
T  52568280 tttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatc-ctttagttgat 52568182  T
Q  219 aaactatttcacctttacc 237  Q
    ||||||||||||| |||||    
T  52568181 aaactatttcaccgttacc 52568163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 2788812 - 2788893
Alignment:
Q  102 aattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||| ||||||  | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  2788812 aattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtactttaa 2788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 2789060 - 2788964
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||| | |||||||||||||||  |||||||||||||||||| | |||||||| |||||| ||| |||| ||||||||||||| ||||||||    
T  2789060 tttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 2788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 22025383 - 22025322
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  22025383 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagtcctttaa 22025322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 36890704 - 36890620
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||||||||||||| |||||||| |  ||||| |||||||| |||  |||||||| ||||||||||||||||||||||||    
T  36890704 cttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttcacc 36890620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 8408393 - 8408493
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||| ||| | |||||||||||||| |||||| |||| |||  ||||| ||| |||| ||||||||| ||| ||||||||||||| |||||||||    
T  8408393 aagtttcaaatagatccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcac 8408492  T
Q  231 c 231  Q
    |    
T  8408493 c 8408493  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 26329805 - 26329883
Alignment:
Q  122 aagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||   |||||||  |||||| ||| |||| |||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 35046467 - 35046545
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttc 197  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||| ||| ||||| |||||| ||| |||| ||||    
T  35046467 tttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 42116124 - 42116050
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaac 222  Q
    ||||||||||||| |||| |||||||||| |||||| ||| |||| ||| ||||||||||||||| |||||||||    
T  42116124 ttttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaac 42116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 43098221 - 43098328
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||| |||  |||||||    | || ||| |||| ||||||||| ||| |||||||||||    
T  43098221 tttaagttttgaaagtttcaattaggtccttttagtttaccagagttccgaagttag----tcaagtttcaaaagtttcaaataagtccttttagttgat 43098316  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  43098317 aaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 52183526 - 52183462
Alignment:
Q  102 aattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattc 166  Q
    |||||| ||||||  | ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  52183526 aattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattc 52183462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 52865973 - 52866096
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||| ||||||  | ||||||||| |||||||| ||||| ||||||||||||||||| ||| || ||  |||| ||||         || |||    
T  52865973 gacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctcaatctagtccttt---------aagttt 52866063  T
Q  197 caaataggtctttttagttgataaactatttca 229  Q
    |||||||||| ||||||||||||||||||||||    
T  52866064 caaataggtcattttagttgataaactatttca 52866096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 2789022 - 2788943
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagt 176  Q
    ||||||||| | ||||||  | |||||||||| |||||||||| |||||  |||||||||||||||||||| ||||||||    
T  2789022 gacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagt 2788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 19632302 - 19632220
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||||||||||| || ||||| |||||| ||| |||| ||| ||||| ||| ||||||||||||||||| |||||    
T  19632302 cttttagtttgacagaattctcaaattagt-ctttaagtttcaaaagttttaaatatgtcattttagttgataaactacttcac 19632220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 237
Target Start/End: Original strand, 19681214 - 19681346
Alignment:
Q  101 gaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    ||||||| ||||||   ||||||||||||||| |||||||||| |  |||||||||||||||||||  ||||     ||||||  |  |||   ||||||    
T  19681214 gaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattccgaagtc----ctttaaggtgcaaaggattcaaa 19681309  T
Q  201 taggtctttttagttgataaactatttcacctttacc 237  Q
    |||||| |||||||||||||||||||||||| |||||    
T  19681310 taggtcattttagttgataaactatttcaccattacc 19681346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 5387677 - 5387588
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||||| ||||||||||| ||  |||||| |||||||| ||||||||| ||  ||| | |||||||| ||||||||| |||||    
T  5387677 ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaatatgtactttcacttgataaattatttcaccgttacc 5387588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 26330124 - 26330056
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| |||||||| |||||| |||| ||| |||||| ||| || ||||||||    
T  26330124 cttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagtt 26330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 41735796 - 41735887
Alignment:
Q  123 agtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||| ||||||||||| | ||| |||||||||| ||| |||||  |||||||| |||||| ||| |||| ||||||||||||| ||||||||    
T  41735796 agttttgaaagtttcaact-ggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 41735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 35024050 - 35023955
Alignment:
Q  134 tttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    ||||||||| ||  ||||||||| ||| |||||| ||||||||  ||||| |||||||| |||  ||| | || ||||||||||||||||||||||    
T  35024050 tttcaattatgtctttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 41735851 - 41735897
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaatt 165  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||    
T  41735851 tttaagtttcaaaagtttcaaataggtccttttagtttgacagaatt 41735897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 23085292 - 23085220
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaa 191  Q
    |||||||||| ||||||||||||||  ||||||||||| | |||||| | || ||||| |||||| |||||||    
T  23085292 tttaagtttcaaaagtttcaattagaatcttttagttttatagaattttcaaattagtcctttaaattttaaa 23085220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 43098189 - 43098257
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| ||||  ||||||||| |||||| |||| ||| |||||| |||||| ||||||||    
T  43098189 cttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtt 43098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 43098529 - 43098461
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||||||||  ||| |||||||||||| |||  ||| |||||| |||||| ||||||||    
T  43098529 cttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtt 43098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 52181722 - 52181774
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    |||||||||||||| |||||| ||||||||||||||| |||| ||| ||||||    
T  52181722 cttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaa 52181774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 31229335 - 31229390
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtt 155  Q
    |||||||| ||||||  | |||||||||| |||||||||| |||||||||||||||    
T  31229335 agaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagtt 31229390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 52866415 - 52866364
Alignment:
Q  143 ggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaat 194  Q
    ||||||||||||||||||||||||  |||||||| |||||| ||| ||||||    
T  52866415 ggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaaat 52866364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 30542723 - 30542769
Alignment:
Q  183 acttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    |||||||||| ||||||| || || ||||||||||||||||||||||    
T  30542723 acttttaaaagtttcaaacagatccttttagttgataaactatttca 30542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 35046632 - 35046550
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaat 201  Q
    |||||||||||||||||| |||| ||   ||||||||||||| |||||  |||||||| |||||| ||| |||| ||| ||||    
T  35046632 tttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 2508751 - 2508670
Alignment:
Q  148 ttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttca 229  Q
    ||||| ||||| | |||| |||||||| | |||||| ||| |||| ||| ||||| ||| |||||||||||||| |||||||    
T  2508751 ttttaatttgataaaatttttaagttactcctttaaatttcaaaagttttaaatatgtccttttagttgataaattatttca 2508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 2909181 - 2909218
Alignment:
Q  146 tcttttagtttgacagaattcttaagttagttctttaa 183  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  2909181 tcttttagtttcacagaattctcaagttagttctttaa 2909218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 52865963 - 52866004
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaactttt 188  Q
    ||||||||||||||||||||| |||||||| |||||| ||||    
T  52865963 cttttagtttgacagaattctcaagttagtcctttaagtttt 52866004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 2789092 - 2789024
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||| |||| ||||| |||||| ||||  || |||||| |||||| ||||||||    
T  2789092 cttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtt 2789024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 5387133 - 5387185
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    ||||||||||||| |||||  ||||||||| |||||| |||||||| ||||||    
T  5387133 cttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaa 5387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 23085327 - 23085272
Alignment:
Q  143 ggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaa 199  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||| |||| ||||||    
T  23085327 ggttcttttagtttgacagaaattttaagttag-tctttaagtttcaaaagtttcaa 23085272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 44915936 - 44915988
Alignment:
Q  178 ctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||| ||| |||| ||| ||| |||||||||||||||||||| ||||||||    
T  44915936 ctttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcac 44915988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 44916330 - 44916294
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||  |||||||||||||||||||||||    
T  44916330 tttcaaataggttattttagttgataaactatttcac 44916294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 31247729 - 31247618
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||| |||||| ||| |||| ||||||||| ||| |||||||||||    
T  31247729 tttaagtttcgaaagtttcaattaggtccttttagttggacagaattcccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgat 31247630  T
Q  219 aaactatttcac 230  Q
    ||| ||||||||    
T  31247629 aaattatttcac 31247618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 4276174 - 4276285
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgat 218  Q
    ||||||||| |||||||||||||| ||  ||||||||||||| |||| ||| ||||||||||||| ||| |||| |||||||||| || |||||||||||    
T  4276174 tttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttctttaagtttcaaaagtttcaaatagttcattttagttgat 4276273  T
Q  219 aaactatttcac 230  Q
    ||||||||||||    
T  4276274 aaactatttcac 4276285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 35555543 - 35555678
Alignment:
Q  97 gacagaattcttaagttaaa-cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatt 195  Q
    ||||||||||  |||||| | |||||||||||| |||||||||||||  |  |||||||||||||||||| | |||||||| | |||| |||| ||| ||    
T  35555543 gacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtccattaaattttgaaagtt 35555642  T
Q  196 tcaaataggtctttttagttgataaactatttcacc 231  Q
    |||||||  || ||||||||||||||||||||||||    
T  35555643 tcaaataaatcattttagttgataaactatttcacc 35555678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 21376593 - 21376723
Alignment:
Q  107 ttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtc 206  Q
    |||||||| |||||||| |||  ||||||| ||||| ||||||||||||||| |||||| | | ||| || |||||| ||| |||| ||| ||||| |||    
T  21376593 ttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttcaggttggtcctttaagtttcaaaagttttaaatatgtc 21376692  T
Q  207 tttttagttgataaactatttcacctttacc 237  Q
     |||||||||||||||||||||||| |||||    
T  21376693 attttagttgataaactatttcaccgttacc 21376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 35545169 - 35545254
Alignment:
Q  146 tcttttagtttgacagaattcttaagttagttctttaactttt-aaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||| |||||| |||||||| | | ||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  35545169 tcttttagtttgaaagaatttttaagttaatccattaactttttaaaaattttaaataagtctttttagttgataaactatttcac 35545254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 19153883 - 19153968
Alignment:
Q  146 tcttttagtttgacagaattctt-aagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||||||||||  | ||||||||| ||||| ||| |||  ||||||||| |||||||||||||||||| ||||||||    
T  19153883 tcttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcac 19153968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 31247194 - 31247273
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactattt 227  Q
    |||||||||||||| |||||| |||||||| |||||| ||| |||| ||||||||| ||| | ||||||||||||||||||    
T  31247194 cttttagtttgacaaaattctcaagttagt-ctttaagtttcaaaagtttcaaataagtcctattagttgataaactattt 31247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 4276142 - 4276210
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||  ||| ||||||||||||||||| |||| ||| |||||| || ||||||||||||    
T  4276142 cttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtt 4276210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 24707474 - 24707558
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||| ||||||||   |||||||| |||||| |||| ||| ||| |||||  || ||||||||||||||||||||||||    
T  24707474 cttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttcacc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 4276689 - 4276598
Alignment:
Q  131 aagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    ||||||||||||| |  |||||||||||||||||||  |||||||| |||||| |||         ||||||| || |||||||||||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagttt---------caaatagatcattttagttgataaactatttcac 4276599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 14964681 - 14964729
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattct 167  Q
    ||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  14964681 tttaagttttgaaagtttcaattatgtctttttagtttgacagaattct 14964729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 54456678 - 54456762
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacc 231  Q
    |||||||||||||||||||   || |||||  ||||| |||  ||| ||||||||| ||| ||||||||||||||||| ||||||    
T  54456678 cttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaattcacc 54456762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 3088200 - 3088137
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgaca 160  Q
    ||||||||| | |||||||   ||||| |||||||||||||||||| || ||||||||||||||    
T  3088200 gacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgaca 3088137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 21377029 - 21376986
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||    
T  21377029 tttcaaataggtccttttagtttataaactatttcaccgttacc 21376986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 21377084 - 21377037
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattc 166  Q
    ||||| |||||||||||||||||||||  ||||||||||||| |||||    
T  21377084 tttaaatttcgaaagtttcaattaggtcattttagtttgacataattc 21377037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 54456959 - 54456896
Alignment:
Q  100 agaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaa 163  Q
    |||||||| ||||||  | ||||||||| ||||| ||||||||| |||||||||||||| ||||    
T  54456959 agaattctcaagttagccctttaagtttagaaagcttcaattagattcttttagtttgatagaa 54456896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 50530283 - 50530333
Alignment:
Q  117 cttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattct 167  Q
    |||||||||||| ||||| | ||||||||  ||||||||||||||||||||    
T  50530283 cttttaagtttcaaaagtattaattaggtcattttagtttgacagaattct 50530333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 3088112 - 3088075
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  3088112 tttcaaataggtccttttaattgataaactatttcacc 3088075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 35555993 - 35555956
Alignment:
Q  194 tttcaaataggtctttttagttgataaactatttcacc 231  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  35555993 tttcaaataggtcattttagttaataaactatttcacc 35555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 62; Significance: 7e-27; HSPs: 4)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 9411 - 9535
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||||||| |||||||||| | |||||||| |||||||||||||         || |||    
T  9411 gacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctcaagttagttcttt---------aagttt 9501  T
Q  197 caaataggtctttttagttgataaactatttcac 230  Q
    |||||||||| |||||||||||||||||||||||    
T  9502 caaataggtccttttagttgataaactatttcac 9535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 9980 - 9896
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttcttt 181  Q
    ||||||||||| ||||||    ||||||||||||||||||||||||| | |||||||||||||| |||||  |||||||| ||||    
T  9980 gacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagtccttt 9896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 9990 - 9922
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||| ||||||||||||||| |||  ||| |||||| ||| || ||||||||    
T  9990 cttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtt 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 9401 - 9469
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||||||||||  ||||| |||   || |||||| |||||| ||||||||    
T  9401 cttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtt 9469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 124442 - 124346
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||   |||||||| |||||| |||  ||| |||||| |||||||||||||||    
T  124442 tttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtt 124346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 124382 - 124335
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattc 166  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||    
T  124382 tttaagtttcgaaagtttcaattaggtctttttagtttgacagaattc 124335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 124182 - 124262
Alignment:
Q  119 tttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaa 200  Q
    |||||||||| ||||||||||  |||| ||||||||||||||||||||  || |||| ||||||| ||| |||| |||||||    
T  124182 tttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttag-tctttaagtttcaaaagtttcaaa 124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 124150 - 124218
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagtt 215  Q
    |||||||||||||| |||||  |||||||| |||||| ||| |||| ||||||| ||||  ||||||||    
T  124150 cttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtt 124218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 45310 - 45195
Alignment:
Q  97 gacagaattcttaagttaaacttttaagtttcgaaagtttcaattaggttcttttagtttgacagaattcttaagttagttctttaacttttaaaaattt 196  Q
    |||| |||||| ||||||  |||||||||||  |||||||||||||||| |||||||||||||| |||| | || |||||  ||||| |||||||| |||    
T  45310 gacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagttt 45211  T
Q  197 caaataggtcttttta 212  Q
    ||||||| || |||||    
T  45210 caaatagatcctttta 45195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 16180 - 16270
Alignment:
Q  147 cttttagtttgacagaattcttaagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcacctttacc 237  Q
    |||||||||||| | ||||   || ||||| |||||| ||| |||| ||| ||||||||| |||||||||||||||||||||||| |||||    
T  16180 cttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactatttcaccgttacc 16270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 16642 - 16581
Alignment:
Q  169 aagttagttctttaacttttaaaaatttcaaataggtctttttagttgataaactatttcac 230  Q
    |||||| | |||||| ||| |||| ||| ||||| ||| |||||||||||||||||||||||    
T  16642 aagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactatttcac 16581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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