View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_102 (Length: 241)
Name: NF1274_low_102
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_102 |
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Alignment Details
Target: chr3 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 42480094 - 42479965
Alignment:
| Q |
1 |
acctggtgctcaaatttcacctattgaaattgcttctcagctcccaacaactaaccctgaagcaccggttatgctggaccgtatcttgcgtctattggct |
100 |
Q |
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| T |
42480094 |
acctggtgctcaaatttcacctattgaaattgcttctcagctcccaacaactaaccctgaagcaccggttatgctggaccgtatcttgcgtctattggct |
42479995 |
T |
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| Q |
101 |
tgttacaatatcctcacaggttctgctcgt |
130 |
Q |
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||||||||||||||||| |||||| |||| |
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| T |
42479994 |
tgttacaatatcctcacttgttctgttcgt |
42479965 |
T |
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