View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_112 (Length: 216)
Name: NF1274_low_112
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_112 |
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Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 193
Target Start/End: Original strand, 46230737 - 46230885
Alignment:
| Q |
38 |
ggagtagcaagggcttatctcaagccggtatgaggagttctcatcaaatcggtgatgcaatttattcctccgtatgttatgagcannnnnnnnnnnnnnn |
137 |
Q |
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| T |
46230737 |
ggagtagcaagggcttatctcaagccggtatgagaagttctcatcaaatcggtgatgcaatttattcctccgtatgttatgagca-------tttttttt |
46230829 |
T |
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| Q |
138 |
nnnnattaaacgttgtcctctcttattgatgaaattgataagatgttgaattcttt |
193 |
Q |
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| T |
46230830 |
ttttattaaacgttgtcctctcttagtgatgaaattgataagatgttgaattcttt |
46230885 |
T |
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