View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1274_low_115 (Length: 207)
Name: NF1274_low_115
Description: NF1274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1274_low_115 |
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Alignment Details
Target: chr8 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27313085 - 27313204
Alignment:
| Q |
1 |
atcaatctggagaaatgcaaatactatgtcagtaattgtaatgatgagtcgctgataaaactaaataattatttttgtgtatgcatcacctggatgatta |
100 |
Q |
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| T |
27313085 |
atcaatctggagaaatgcaaataccatgtcagtaattgtaatgaagagtcgctgataaaactaaataattatttttgtgtatgcatcacctggatgatta |
27313184 |
T |
|
| Q |
101 |
gattgtctttacaaggccct |
120 |
Q |
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|||||||||||||||||||| |
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| T |
27313185 |
gattgtctttacaaggccct |
27313204 |
T |
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